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Impact of the coronavirus (COVID-19) pandemic on scientific research and implications for clinical academic training–a review

ADVANCE: Organizational Change for Gender Equity in STEM Academic Professions AND Program Evaluation

Franchi T, Sohrabi C.
GSID: xLWwOu4fJyUJ
C Sohrabi, G Mathew, T Franchi, A Kerwan… - International Journal of …, 2021 - Elsevier

A pneumonia outbreak of unknown aetiology emerged in Wuhan, China in December 2019. The causative organism was identified on 7th January 2020 as a novel coronavirus (nCoV or 2019-nCoV), later renamed severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2). The...

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Sohrabi, C., Mathew, G., Franchi, T., Kerwan, A., Griffin, M., Del Mundo, J. S. C., ... & Agha, R. (2021). Impact of the coronavirus (COVID-19) pandemic on scientific research and implications for clinical academic training–a review. International Journal of Surgery, 86, 57-63.
Sohrabi, Catrin, et al. "Impact of the coronavirus (COVID-19) pandemic on scientific research and implications for clinical academic training–a review." International Journal of Surgery 86 (2021): 57-63.
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SalmoNet, an integrated network of ten .

NPJ systems biology and applications

Métris A, Sudhakar P, Fazekas D, Demeter A, Ari E, Olbei M, Branchu P, Kingsley RA, Baranyi J, Korcsmáros T.
PMID: 29057095
NPJ Syst Biol Appl. 2017 Oct 18;3:31. doi: 10.1038/s41540-017-0034-z. eCollection 2017.

No abstract available.

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Métris A, Sudhakar P, Fazekas D, et al. SalmoNet, an integrated network of ten . NPJ Syst Biol Appl. 2017;3:31doi: 10.1038/s41540-017-0034-z.
Métris, A., Sudhakar, P., Fazekas, D., Demeter, A., Ari, E., Olbei, M., Branchu, P., Kingsley, R. A., Baranyi, J., & Korcsmáros, T. (2017). SalmoNet, an integrated network of ten . NPJ systems biology and applications, 331. https://doi.org/10.1038/s41540-017-0034-z
Métris, Aline, et al. "SalmoNet, an integrated network of ten ." NPJ systems biology and applications vol. 3 (2017): 31. doi: https://doi.org/10.1038/s41540-017-0034-z
Métris A, Sudhakar P, Fazekas D, Demeter A, Ari E, Olbei M, Branchu P, Kingsley RA, Baranyi J, Korcsmáros T. SalmoNet, an integrated network of ten . NPJ Syst Biol Appl. 2017 Oct 18;3:31. doi: 10.1038/s41540-017-0034-z. eCollection 2017. PMID: 29057095; PMCID: PMC5647365.
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Fluoxetine effects on molecular, cellular and behavioral endophenotypes of depression are driven by the living environment.

Molecular psychiatry

Alboni S, van Dijk RM, Poggini S, Milior G, Perrotta M, Drenth T, Brunello N, Wolfer DP, Limatola C, Amrein I, Cirulli F, Maggi L, Branchi I.
PMID: 26598067
Mol Psychiatry. 2017 Apr;22(4):635. doi: 10.1038/mp.2015.191. Epub 2015 Nov 24.

No abstract available.

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Alboni S, van Dijk RM, Poggini S, et al. Fluoxetine effects on molecular, cellular and behavioral endophenotypes of depression are driven by the living environment. Mol Psychiatry. 2015;22(4):635doi: 10.1038/mp.2015.191.
Alboni, S., van Dijk, R. M., Poggini, S., Milior, G., Perrotta, M., Drenth, T., Brunello, N., Wolfer, D. P., Limatola, C., Amrein, I., Cirulli, F., Maggi, L., & Branchi, I. (2017). Fluoxetine effects on molecular, cellular and behavioral endophenotypes of depression are driven by the living environment. Molecular psychiatry, 22(4), 635. https://doi.org/10.1038/mp.2015.191
Alboni, S, et al. "Fluoxetine effects on molecular, cellular and behavioral endophenotypes of depression are driven by the living environment." Molecular psychiatry vol. 22,4 (2017): 635. doi: https://doi.org/10.1038/mp.2015.191
Alboni S, van Dijk RM, Poggini S, Milior G, Perrotta M, Drenth T, Brunello N, Wolfer DP, Limatola C, Amrein I, Cirulli F, Maggi L, Branchi I. Fluoxetine effects on molecular, cellular and behavioral endophenotypes of depression are driven by the living environment. Mol Psychiatry. 2017 Apr;22(4):635. doi: 10.1038/mp.2015.191. Epub 2015 Nov 24. PMID: 26598067; PMCID: PMC7608288.
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Correction: Effects of the Staphylococcus aureus and Staphylococcus epidermidis Secretomes Isolated from the Skin Microbiota of Atopic Children on CD4+ T Cell Activation.

PloS one

Laborel-Préneron E, Bianchi P, Boralevi F, Lehours P, Fraysse F, Morice-Picard F, Sugai M, Sato'o Y, Badiou C, Lina G, Schmitt AM, Redoulès D, Casas C, Davrinche C.
PMID: 26618347
PLoS One. 2015 Nov 30;10(11):e0144323. doi: 10.1371/journal.pone.0144323. eCollection 2015.

No abstract available.

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Laborel-Préneron E, Bianchi P, Boralevi F, et al. Correction: Effects of the Staphylococcus aureus and Staphylococcus epidermidis Secretomes Isolated from the Skin Microbiota of Atopic Children on CD4+ T Cell Activation. PLoS One. 2015;10(11):e0144323doi: 10.1371/journal.pone.0144323.
Laborel-Préneron, E., Bianchi, P., Boralevi, F., Lehours, P., Fraysse, F., Morice-Picard, F., Sugai, M., Sato'o, Y., Badiou, C., Lina, G., Schmitt, A. M., Redoulès, D., Casas, C., & Davrinche, C. (2015). Correction: Effects of the Staphylococcus aureus and Staphylococcus epidermidis Secretomes Isolated from the Skin Microbiota of Atopic Children on CD4+ T Cell Activation. PloS one, 10(11), e0144323. https://doi.org/10.1371/journal.pone.0144323
Laborel-Préneron, Emeline, et al. "Correction: Effects of the Staphylococcus aureus and Staphylococcus epidermidis Secretomes Isolated from the Skin Microbiota of Atopic Children on CD4+ T Cell Activation." PloS one vol. 10,11 (2015): e0144323. doi: https://doi.org/10.1371/journal.pone.0144323
Laborel-Préneron E, Bianchi P, Boralevi F, Lehours P, Fraysse F, Morice-Picard F, Sugai M, Sato'o Y, Badiou C, Lina G, Schmitt AM, Redoulès D, Casas C, Davrinche C. Correction: Effects of the Staphylococcus aureus and Staphylococcus epidermidis Secretomes Isolated from the Skin Microbiota of Atopic Children on CD4+ T Cell Activation. PLoS One. 2015 Nov 30;10(11):e0144323. doi: 10.1371/journal.pone.0144323. eCollection 2015. PMID: 26618347; PMCID: PMC4664274.
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Cytological Ki-67 in pancreatic endocrine tumors: a new "must"?.

Gland surgery

Franchi G, Manzoni MF.
PMID: 25493251
Gland Surg. 2014 Nov;3(4):219-21. doi: 10.3978/j.issn.2227-684X.2014.08.02.

In the last decades, the incidence of neuroendocrine tumors (NETs) has been rising and this might be due to more awareness, improved diagnostic tools and a change in definition. The histopathological type of the tumor, its Ki-67 or MIB-1...

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Franchi G, Manzoni MF. Cytological Ki-67 in pancreatic endocrine tumors: a new "must"?. Gland Surg. 2014;3(4):219-21doi: 10.3978/j.issn.2227-684X.2014.08.02.
Franchi, G., & Manzoni, M. F. (2014). Cytological Ki-67 in pancreatic endocrine tumors: a new "must"?. Gland surgery, 3(4), 219-21. https://doi.org/10.3978/j.issn.2227-684X.2014.08.02
Franchi, Giulia, and Manzoni, Marco F. "Cytological Ki-67 in pancreatic endocrine tumors: a new "must"?." Gland surgery vol. 3,4 (2014): 219-21. doi: https://doi.org/10.3978/j.issn.2227-684X.2014.08.02
Franchi G, Manzoni MF. Cytological Ki-67 in pancreatic endocrine tumors: a new "must"?. Gland Surg. 2014 Nov;3(4):219-21. doi: 10.3978/j.issn.2227-684X.2014.08.02. PMID: 25493251; PMCID: PMC4244510.
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Erratum to: Extensive multifocal branch duct IPMN of the pancreas after liver transplantation: is surgery justified?.

European journal of medical research

Branchi V, Lingohr P, Willinek WA, Bölke E, Semaan A, Zhou H, Kristiansen G, Klöppel G, Kalff JC, Schäfer N, Matthaei H.
PMID: 25989900
Eur J Med Res. 2015 May 20;20:53. doi: 10.1186/s40001-015-0143-3.

No abstract available.

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Branchi V, Lingohr P, Willinek WA, et al. Erratum to: Extensive multifocal branch duct IPMN of the pancreas after liver transplantation: is surgery justified?. Eur J Med Res. 2015;20:53doi: 10.1186/s40001-015-0143-3.
Branchi, V., Lingohr, P., Willinek, W. A., Bölke, E., Semaan, A., Zhou, H., Kristiansen, G., Klöppel, G., Kalff, J. C., Schäfer, N., & Matthaei, H. (2015). Erratum to: Extensive multifocal branch duct IPMN of the pancreas after liver transplantation: is surgery justified?. European journal of medical research, 2053. https://doi.org/10.1186/s40001-015-0143-3
Branchi, Vittorio, et al. "Erratum to: Extensive multifocal branch duct IPMN of the pancreas after liver transplantation: is surgery justified?." European journal of medical research vol. 20 (2015): 53. doi: https://doi.org/10.1186/s40001-015-0143-3
Branchi V, Lingohr P, Willinek WA, Bölke E, Semaan A, Zhou H, Kristiansen G, Klöppel G, Kalff JC, Schäfer N, Matthaei H. Erratum to: Extensive multifocal branch duct IPMN of the pancreas after liver transplantation: is surgery justified?. Eur J Med Res. 2015 May 20;20:53. doi: 10.1186/s40001-015-0143-3. PMID: 25989900; PMCID: PMC4438456.
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Physico-chemical characteristics of topsoil for contrasted forest, agricultural, urban and industrial land uses in France.

The Science of the total environment

Joimel S, Cortet J, Jolivet CC, Saby NP, Chenot ED, Branchu P, Consalès JN, Lefort C, Morel JL, Schwartz C.
PMID: 26745291
Sci Total Environ. 2016 Mar 01;545:40-7. doi: 10.1016/j.scitotenv.2015.12.035. Epub 2015 Dec 30.

Soil quality is related to soil characteristics such as fertility and contamination. The aim of this study is to assess the effect of land use on these soil characteristics and to confirm the following anthropisation gradient: (i) forest, (ii)...

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Joimel S, Cortet J, Jolivet CC, et al. Physico-chemical characteristics of topsoil for contrasted forest, agricultural, urban and industrial land uses in France. Sci Total Environ. 2015;545:40-7doi: 10.1016/j.scitotenv.2015.12.035.
Joimel, S., Cortet, J., Jolivet, C. C., Saby, N. P., Chenot, E. D., Branchu, P., Consalès, J. N., Lefort, C., Morel, J. L., & Schwartz, C. (2016). Physico-chemical characteristics of topsoil for contrasted forest, agricultural, urban and industrial land uses in France. The Science of the total environment, 54540-7. https://doi.org/10.1016/j.scitotenv.2015.12.035
Joimel, S, et al. "Physico-chemical characteristics of topsoil for contrasted forest, agricultural, urban and industrial land uses in France." The Science of the total environment vol. 545 (2016): 40-7. doi: https://doi.org/10.1016/j.scitotenv.2015.12.035
Joimel S, Cortet J, Jolivet CC, Saby NP, Chenot ED, Branchu P, Consalès JN, Lefort C, Morel JL, Schwartz C. Physico-chemical characteristics of topsoil for contrasted forest, agricultural, urban and industrial land uses in France. Sci Total Environ. 2016 Mar 01;545:40-7. doi: 10.1016/j.scitotenv.2015.12.035. Epub 2015 Dec 30. PMID: 26745291.
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Interventional Audiology to Address Hearing Health Care Disparities: .

Seminars in hearing

Marrone N, Ingram M, Somoza M, Jacob DS, Sanchez A, Adamovich S, Harris FP.
PMID: 28522894
Semin Hear. 2017 May;38(2):198-211. doi: 10.1055/s-0037-1601575.

Interventional audiology, specifically community-based outreach, can connect people with the hearing health care system. Community-based participatory research methods were applied in two phases of research to: (1) investigate the needs of families affected by hearing loss in a rural...

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Marrone N, Ingram M, Somoza M, et al. Interventional Audiology to Address Hearing Health Care Disparities: . Semin Hear. 2017;38(2):198-211doi: 10.1055/s-0037-1601575.
Marrone, N., Ingram, M., Somoza, M., Jacob, D. S., Sanchez, A., Adamovich, S., & Harris, F. P. (2017). Interventional Audiology to Address Hearing Health Care Disparities: . Seminars in hearing, 38(2), 198-211. https://doi.org/10.1055/s-0037-1601575
Marrone, Nicole, et al. "Interventional Audiology to Address Hearing Health Care Disparities: ." Seminars in hearing vol. 38,2 (2017): 198-211. doi: https://doi.org/10.1055/s-0037-1601575
Marrone N, Ingram M, Somoza M, Jacob DS, Sanchez A, Adamovich S, Harris FP. Interventional Audiology to Address Hearing Health Care Disparities: . Semin Hear. 2017 May;38(2):198-211. doi: 10.1055/s-0037-1601575. PMID: 28522894; PMCID: PMC5435479.
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Establishment and Characterization of a Human Small Cell Osteosarcoma Cancer Stem Cell Line: A New Possible In Vitro Model for Discovering Small Cell Osteosarcoma Biology.

Stem cells international

Palmini G, Zonefrati R, Romagnoli C, Aldinucci A, Mavilia C, Leoncini G, Franchi A, Capanna R, Brandi ML.
PMID: 27651797
Stem Cells Int. 2016;2016:3042198. doi: 10.1155/2016/3042198. Epub 2016 Aug 29.

Osteosarcoma (OSA) is the most common primary malignant bone tumor, usually arising in the long bones of children and young adults. There are different subtypes of OSA, among which we find the conventional OS (also called medullary or central...

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Palmini G, Zonefrati R, Romagnoli C, et al. Establishment and Characterization of a Human Small Cell Osteosarcoma Cancer Stem Cell Line: A New Possible In Vitro Model for Discovering Small Cell Osteosarcoma Biology. Stem Cells Int. 2016;2016:3042198doi: 10.1155/2016/3042198.
Palmini, G., Zonefrati, R., Romagnoli, C., Aldinucci, A., Mavilia, C., Leoncini, G., Franchi, A., Capanna, R., & Brandi, M. L. (2016). Establishment and Characterization of a Human Small Cell Osteosarcoma Cancer Stem Cell Line: A New Possible In Vitro Model for Discovering Small Cell Osteosarcoma Biology. Stem cells international, 20163042198. https://doi.org/10.1155/2016/3042198
Palmini, Gaia, et al. "Establishment and Characterization of a Human Small Cell Osteosarcoma Cancer Stem Cell Line: A New Possible In Vitro Model for Discovering Small Cell Osteosarcoma Biology." Stem cells international vol. 2016 (2016): 3042198. doi: https://doi.org/10.1155/2016/3042198
Palmini G, Zonefrati R, Romagnoli C, Aldinucci A, Mavilia C, Leoncini G, Franchi A, Capanna R, Brandi ML. Establishment and Characterization of a Human Small Cell Osteosarcoma Cancer Stem Cell Line: A New Possible In Vitro Model for Discovering Small Cell Osteosarcoma Biology. Stem Cells Int. 2016;2016:3042198. doi: 10.1155/2016/3042198. Epub 2016 Aug 29. PMID: 27651797; PMCID: PMC5019944.
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Hereditary Xerocytosis due to Mutations in .

Case reports in hematology

Fermo E, Vercellati C, Marcello AP, Zaninoni A, van Wijk R, Mirra N, Curcio C, Cortelezzi A, Zanella A, Barcellini W, Bianchi P.
PMID: 28367341
Case Rep Hematol. 2017;2017:2769570. doi: 10.1155/2017/2769570. Epub 2017 Mar 06.

Hereditary xerocytosis (HX) is a rare disorder caused by defects of RBC permeability, associated with haemolytic anaemia of variable degree and iron overload. It is sometimes misdiagnosed as hereditary spherocytosis or other congenital haemolytic anaemia. Splenectomy is contraindicated due...

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Fermo E, Vercellati C, Marcello AP, et al. Hereditary Xerocytosis due to Mutations in . Case Rep Hematol. 2017;2017:2769570doi: 10.1155/2017/2769570.
Fermo, E., Vercellati, C., Marcello, A. P., Zaninoni, A., van Wijk, R., Mirra, N., Curcio, C., Cortelezzi, A., Zanella, A., Barcellini, W., & Bianchi, P. (2017). Hereditary Xerocytosis due to Mutations in . Case reports in hematology, 20172769570. https://doi.org/10.1155/2017/2769570
Fermo, Elisa, et al. "Hereditary Xerocytosis due to Mutations in ." Case reports in hematology vol. 2017 (2017): 2769570. doi: https://doi.org/10.1155/2017/2769570
Fermo E, Vercellati C, Marcello AP, Zaninoni A, van Wijk R, Mirra N, Curcio C, Cortelezzi A, Zanella A, Barcellini W, Bianchi P. Hereditary Xerocytosis due to Mutations in . Case Rep Hematol. 2017;2017:2769570. doi: 10.1155/2017/2769570. Epub 2017 Mar 06. PMID: 28367341; PMCID: PMC5358460.
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Learning from a GP exchange to France.

Education for primary care : an official publication of the Association of Course Organisers, National Association of GP Tutors, World Organisation of Family Doctors

Metcalfe NH, Frances P.
PMID: 26808806
Educ Prim Care. 2015 Sep;26(5):356-7. doi: 10.1080/14739879.2015.1079966.

No abstract available.

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Metcalfe NH, Frances P. Learning from a GP exchange to France. Educ Prim Care. 2015;26(5):356-7doi: 10.1080/14739879.2015.1079966.
Metcalfe, N. H., & Frances, P. (2015). Learning from a GP exchange to France. Education for primary care : an official publication of the Association of Course Organisers, National Association of GP Tutors, World Organisation of Family Doctors, 26(5), 356-7. https://doi.org/10.1080/14739879.2015.1079966
Metcalfe, Neil H, and Frances, Pierre. "Learning from a GP exchange to France." Education for primary care : an official publication of the Association of Course Organisers, National Association of GP Tutors, World Organisation of Family Doctors vol. 26,5 (2015): 356-7. doi: https://doi.org/10.1080/14739879.2015.1079966
Metcalfe NH, Frances P. Learning from a GP exchange to France. Educ Prim Care. 2015 Sep;26(5):356-7. doi: 10.1080/14739879.2015.1079966. PMID: 26808806.
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Salvage therapy with high dose Intravenous Immunoglobulins in acquired Von Willebrand Syndrome and unresponsive severe intestinal bleeding.

Experimental hematology & oncology

Cugno M, Tedeschi A, Siboni SM, Stufano F, Depetri F, Franchi F, Griffini S, Peyvandi F.
PMID: 24926417
Exp Hematol Oncol. 2014 Jun 04;3:15. doi: 10.1186/2162-3619-3-15. eCollection 2014.

A 91-year-old woman affected with acquired Von Willebrand (VW) syndrome and intestinal angiodysplasias presented with severe gastrointestinal bleeding (hemoglobin 5 g/dl). Despite replacement therapy with VW factor/factor VIII concentrate qid, bleeding did not stop (eleven packed red blood cell...

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Cugno M, Tedeschi A, Siboni SM, et al. Salvage therapy with high dose Intravenous Immunoglobulins in acquired Von Willebrand Syndrome and unresponsive severe intestinal bleeding. Exp Hematol Oncol. 2014;3:15doi: 10.1186/2162-3619-3-15.
Cugno, M., Tedeschi, A., Siboni, S. M., Stufano, F., Depetri, F., Franchi, F., Griffini, S., & Peyvandi, F. (2014). Salvage therapy with high dose Intravenous Immunoglobulins in acquired Von Willebrand Syndrome and unresponsive severe intestinal bleeding. Experimental hematology & oncology, 315. https://doi.org/10.1186/2162-3619-3-15
Cugno, Massimo, et al. "Salvage therapy with high dose Intravenous Immunoglobulins in acquired Von Willebrand Syndrome and unresponsive severe intestinal bleeding." Experimental hematology & oncology vol. 3 (2014): 15. doi: https://doi.org/10.1186/2162-3619-3-15
Cugno M, Tedeschi A, Siboni SM, Stufano F, Depetri F, Franchi F, Griffini S, Peyvandi F. Salvage therapy with high dose Intravenous Immunoglobulins in acquired Von Willebrand Syndrome and unresponsive severe intestinal bleeding. Exp Hematol Oncol. 2014 Jun 04;3:15. doi: 10.1186/2162-3619-3-15. eCollection 2014. PMID: 24926417; PMCID: PMC4055248.
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