Advanced Search
Display options
Filter resources
Text Availability
Article type
Publication date
Species
Language
Sex
Age
Showing 1 to 12 of 13 entries
Sorted by: Best Match Show Resources per page
Salvage of bilateral renal artery occlusion after endovascular aneurysm repair with open splenorenal bypass.

Journal of vascular surgery cases and innovative techniques

Jessula S, Herman CR, Lee M, Lightfoot CB, Casey P.
PMID: 29349409
J Vasc Surg Cases Innov Tech. 2017 Sep 19;3(3):163-166. doi: 10.1016/j.jvscit.2017.04.001. eCollection 2017 Sep.

We report renal salvage maneuvers after accidental bilateral renal artery coverage during endovascular aneurysm repair of an infrarenal abdominal aortic aneurysm. A 79-year-old man with an infrarenal abdominal aortic aneurysm was treated with endovascular aneurysm repair. Completion angiography demonstrated...

Author Correction: Deep learning boosts sensitivity of mass spectrometry-based immunopeptidomics.

Nature communications

Wilhelm M, Zolg DP, Graber M, Gessulat S, Schmidt T, Schnatbaum K, Schwencke-Westphal C, Seifert P, de Andrade Krätzig N, Zerweck J, Knaute T, Bräunlein E, Samaras P, Lautenbacher L, Klaeger S, Wenschuh H, Rad R, Delanghe B, Huhmer A, Carr SA, Clauser KR, Krackhardt AM, Reimer U, Kuster B.
PMID: 34162890
Nat Commun. 2021 Jun 23;12(1):4002. doi: 10.1038/s41467-021-24263-w.

No abstract available.

Spectral Prediction Features as a Solution for the Search Space Size Problem in Proteogenomics.

Molecular & cellular proteomics : MCP

Verbruggen S, Gessulat S, Gabriels R, Matsaroki A, Van de Voorde H, Kuster B, Degroeve S, Martens L, Van Criekinge W, Wilhelm M, Menschaert G.
PMID: 33823297
Mol Cell Proteomics. 2021;20:100076. doi: 10.1016/j.mcpro.2021.100076. Epub 2021 Apr 03.

Proteogenomics approaches often struggle with the distinction between true and false peptide-to-spectrum matches as the database size enlarges. However, features extracted from tandem mass spectrometry intensity predictors can enhance the peptide identification rate and can provide extra confidence for...

Reassuring Intraoperative Parameters Do Not Obviate the Need for Infrainguinal Bypass Completion Angiograms.

Annals of surgery

Maximilian Png CY, Kim Y, Jessula S, DeCarlo CS, Waller HD, Feldman ZM, Sumpio BJ, Lee S, Dua A, Srivastava SD, Conrad MF.
PMID: 34966067
Ann Surg. 2021 Dec 28; doi: 10.1097/SLA.0000000000005363. Epub 2021 Dec 28.

OBJECTIVE: To determine if routine completion angiography for lower extremity bypasses using vein conduit results in lower rates of postoperative bypass occlusion.SUMMARY BACKGROUND DATA: With the increasing availability of on-table angiography and significant advancements in endovascular techniques, some operators...

Spectral Prediction Features as a Solution for the Search Space Size Problem in Proteogenomics.

Molecular & cellular proteomics : MCP

Verbruggen S, Gessulat S, Gabriels R, Matsaroki A, Van de Voorde H, Kuster B, Degroeve S, Martens L, Van Criekinge W, Wilhelm M, Menschaert G.
PMID: 33823297
Mol Cell Proteomics. 2021;20:100076. doi: 10.1016/j.mcpro.2021.100076. Epub 2021 Apr 03.

Proteogenomics approaches often struggle with the distinction between true and false peptide-to-spectrum matches as the database size enlarges. However, features extracted from tandem mass spectrometry intensity predictors can enhance the peptide identification rate and can provide extra confidence for...

A Smartphone app for intensive care unit rotation Orientation.

Canadian medical education journal

Bednarek O, Loubani O, Jessula S, Minor S.
PMID: 33349767
Can Med Educ J. 2020 Dec 07;11(6):e156-e158. doi: 10.36834/cmej.70650. eCollection 2020 Dec.

No abstract available.

Recent advances in protein-protein interaction prediction: experimental and computational methods.

Expert opinion on drug discovery

Jessulat M, Pitre S, Gui Y, Hooshyar M, Omidi K, Samanfar B, Tan le H, Alamgir M, Green J, Dehne F, Golshani A.
PMID: 22646215
Expert Opin Drug Discov. 2011 Sep;6(9):921-35. doi: 10.1517/17460441.2011.603722. Epub 2011 Jul 29.

INTRODUCTION: Proteins within the cell act as part of complex networks, which allow pathways and processes to function. Therefore, understanding how proteins interact is a significant area of current research.AREAS COVERED: This review aims to present an overview of...

Rewiring of the Human Mitochondrial Interactome during Neuronal Reprogramming Reveals Regulators of the Respirasome and Neurogenesis.

iScience

Moutaoufik MT, Malty R, Amin S, Zhang Q, Phanse S, Gagarinova A, Zilocchi M, Hoell L, Minic Z, Gagarinova M, Aoki H, Stockwell J, Jessulat M, Goebels F, Broderick K, Scott NE, Vlasblom J, Musso G, Prasad B, Lamantea E, Garavaglia B, Rajput A, Murayama K, Okazaki Y, Foster LJ, Bader GD, Cayabyab FS, Babu M.
PMID: 31536960
iScience. 2019 Sep 27;19:1114-1132. doi: 10.1016/j.isci.2019.08.057. Epub 2019 Sep 04.

Mitochondrial protein (MP) assemblies undergo alterations during neurogenesis, a complex process vital in brain homeostasis and disease. Yet which MP assemblies remodel during differentiation remains unclear. Here, using mass spectrometry-based co-fractionation profiles and phosphoproteomics, we generated mitochondrial interaction maps...

In Silico Engineering of Synthetic Binding Proteins from Random Amino Acid Sequences.

iScience

Burnside D, Schoenrock A, Moteshareie H, Hooshyar M, Basra P, Hajikarimlou M, Dick K, Barnes B, Kazmirchuk T, Jessulat M, Pitre S, Samanfar B, Babu M, Green JR, Wong A, Dehne F, Biggar KK, Golshani A.
PMID: 30660105
iScience. 2019 Jan 25;11:375-387. doi: 10.1016/j.isci.2018.11.038. Epub 2018 Dec 04.

Synthetic proteins with high affinity and selectivity for a protein target can be used as research tools, biomarkers, and pharmacological agents, but few methods exist to design such proteins de novo. To this end, the In-Silico Protein Synthesizer (InSiPS)...

INFERYS rescoring: Boosting peptide identifications and scoring confidence of database search results.

Rapid communications in mass spectrometry : RCM

Zolg DP, Gessulat S, Paschke C, Graber M, Rathke-Kuhnert M, Seefried F, Fitzemeier K, Berg F, Lopez-Ferrer D, Horn D, Henrich C, Huhmer A, Delanghe B, Frejno M.
PMID: 34015160
Rapid Commun Mass Spectrom. 2021 May 20;e9128. doi: 10.1002/rcm.9128. Epub 2021 May 20.

Database search engines for bottom-up proteomics largely ignore peptide fragment ion intensities during the automated scoring of tandem mass spectra against protein databases. Recent advances in deep learning allow the accurate prediction of peptide fragment ion intensities. Using these...

Chemical-genetic profile analysis of five inhibitory compounds in yeast.

BMC chemical biology

Alamgir M, Erukova V, Jessulat M, Azizi A, Golshani A.
PMID: 20691087
BMC Chem Biol. 2010 Aug 06;10:6. doi: 10.1186/1472-6769-10-6.

BACKGROUND: Chemical-genetic profiling of inhibitory compounds can lead to identification of their modes of action. These profiles can help elucidate the complex interactions between small bioactive compounds and the cell machinery, and explain putative gene function(s).RESULTS: Colony size reduction...

Spectral Prediction Features as a Solution for the Search Space Size Problem in Proteogenomics.

Molecular & cellular proteomics : MCP

Verbruggen S, Gessulat S, Gabriels R, Matsaroki A, Van de Voorde H, Kuster B, Degroeve S, Martens L, Van Criekinge W, Wilhelm M, Menschaert G.
PMID: 33823297
Mol Cell Proteomics. 2021 Apr 03;20:100076. doi: 10.1016/j.mcpro.2021.100076. Epub 2021 Apr 03.

Proteogenomics approaches often struggle with the distinction between true and false peptide-to-spectrum matches as the database size enlarges. However, features extracted from tandem mass spectrometry intensity predictors can enhance the peptide identification rate and can provide extra confidence for...

Showing 1 to 12 of 13 entries