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Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations.

Frontiers in immunology

Zimmermann MT, Kennedy RB, Grill DE, Oberg AL, Goergen KM, Ovsyannikova IG, Haralambieva IH, Poland GA.
PMID: 28484452
Front Immunol. 2017 Apr 21;8:445. doi: 10.3389/fimmu.2017.00445. eCollection 2017.

The development of a humoral immune response to influenza vaccines occurs on a multisystems level. Due to the orchestration required for robust immune responses when multiple genes and their regulatory components across multiple cell types are involved, we examined...

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Zimmermann MT, Kennedy RB, Grill DE, et al. Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations. Front Immunol. 2017;8:445doi: 10.3389/fimmu.2017.00445.
Zimmermann, M. T., Kennedy, R. B., Grill, D. E., Oberg, A. L., Goergen, K. M., Ovsyannikova, I. G., Haralambieva, I. H., & Poland, G. A. (2017). Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations. Frontiers in immunology, 8445. https://doi.org/10.3389/fimmu.2017.00445
Zimmermann, Michael T, et al. "Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations." Frontiers in immunology vol. 8 (2017): 445. doi: https://doi.org/10.3389/fimmu.2017.00445
Zimmermann MT, Kennedy RB, Grill DE, Oberg AL, Goergen KM, Ovsyannikova IG, Haralambieva IH, Poland GA. Integration of Immune Cell Populations, mRNA-Seq, and CpG Methylation to Better Predict Humoral Immunity to Influenza Vaccination: Dependence of mRNA-Seq/CpG Methylation on Immune Cell Populations. Front Immunol. 2017 Apr 21;8:445. doi: 10.3389/fimmu.2017.00445. eCollection 2017. PMID: 28484452; PMCID: PMC5399034.
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Amino acids metabolism by VO 208 hybridoma cells: some aspects of the culture process and medium composition influence.

Cytotechnology

Martial-Gros A, Goergen JL, Engasser JM, Marc A.
PMID: 19002906
Cytotechnology. 2001 Oct;37(2):93-105. doi: 10.1023/A:1019908310300.

In the present study an approach has been developed in order to examine the consequence of essential and non essential amino acid supplementation on VO208 hybridoma cells behaviour. The effect of amino acid enrichment has been studied taking into...

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Martial-Gros A, Goergen JL, Engasser JM, et al. Amino acids metabolism by VO 208 hybridoma cells: some aspects of the culture process and medium composition influence. Cytotechnology. 2001;37(2):93-105doi: 10.1023/A:1019908310300.
Martial-Gros, A., Goergen, J. L., Engasser, J. M., & Marc, A. (2001). Amino acids metabolism by VO 208 hybridoma cells: some aspects of the culture process and medium composition influence. Cytotechnology, 37(2), 93-105. https://doi.org/10.1023/A:1019908310300
Martial-Gros, A, et al. "Amino acids metabolism by VO 208 hybridoma cells: some aspects of the culture process and medium composition influence." Cytotechnology vol. 37,2 (2001): 93-105. doi: https://doi.org/10.1023/A:1019908310300
Martial-Gros A, Goergen JL, Engasser JM, Marc A. Amino acids metabolism by VO 208 hybridoma cells: some aspects of the culture process and medium composition influence. Cytotechnology. 2001 Oct;37(2):93-105. doi: 10.1023/A:1019908310300. PMID: 19002906; PMCID: PMC3449694.
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Modelling study of soil C, N and pH response to air pollution and climate change using European LTER site observations.

The Science of the total environment

Holmberg M, Aherne J, Austnes K, Beloica J, De Marco A, Dirnböck T, Fornasier MF, Goergen K, Futter M, Lindroos AJ, Krám P, Neirynck J, Nieminen TM, Pecka T, Posch M, Pröll G, Rowe EC, Scheuschner T, Schlutow A, Valinia S, Forsius M.
PMID: 29860010
Sci Total Environ. 2018 Nov 01;640:387-399. doi: 10.1016/j.scitotenv.2018.05.299. Epub 2018 May 31.

Current climate warming is expected to continue in coming decades, whereas high N deposition may stabilize, in contrast to the clear decrease in S deposition. These pressures have distinctive regional patterns and their resulting impact on soil conditions is...

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Holmberg M, Aherne J, Austnes K, et al. Modelling study of soil C, N and pH response to air pollution and climate change using European LTER site observations. Sci Total Environ. 2018;640:387-399doi: 10.1016/j.scitotenv.2018.05.299.
Holmberg, M., Aherne, J., Austnes, K., Beloica, J., De Marco, A., Dirnböck, T., Fornasier, M. F., Goergen, K., Futter, M., Lindroos, A. J., Krám, P., Neirynck, J., Nieminen, T. M., Pecka, T., Posch, M., Pröll, G., Rowe, E. C., Scheuschner, T., Schlutow, A., Valinia, S., & Forsius, M. (2018). Modelling study of soil C, N and pH response to air pollution and climate change using European LTER site observations. The Science of the total environment, 640387-399. https://doi.org/10.1016/j.scitotenv.2018.05.299
Holmberg, Maria, et al. "Modelling study of soil C, N and pH response to air pollution and climate change using European LTER site observations." The Science of the total environment vol. 640 (2018): 387-399. doi: https://doi.org/10.1016/j.scitotenv.2018.05.299
Holmberg M, Aherne J, Austnes K, Beloica J, De Marco A, Dirnböck T, Fornasier MF, Goergen K, Futter M, Lindroos AJ, Krám P, Neirynck J, Nieminen TM, Pecka T, Posch M, Pröll G, Rowe EC, Scheuschner T, Schlutow A, Valinia S, Forsius M. Modelling study of soil C, N and pH response to air pollution and climate change using European LTER site observations. Sci Total Environ. 2018 Nov 01;640:387-399. doi: 10.1016/j.scitotenv.2018.05.299. Epub 2018 May 31. PMID: 29860010.
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[No title available]

ACS biomaterials science & engineering

Ghosh S, Cimino JG, Scott AK, Damen FW, Phillips EH, Veress AI, Neu CP, Goergen CJ.
PMID: 29276759
ACS Biomater Sci Eng. 2017 Nov 13;3(11):2798-2805. doi: 10.1021/acsbiomaterials.6b00772. Epub 2017 Feb 17.

Biological tissues have a complex hierarchical architecture that spans organ to subcellular scales and comprises interconnected biophysical and biochemical machinery. Mechanotransduction, gene regulation, gene protection, and structure-function relationships in tissues depend on how force and strain are modulated from...

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Ghosh S, Cimino JG, Scott AK, et al. . ACS Biomater Sci Eng. 2017;3(11):2798-2805doi: 10.1021/acsbiomaterials.6b00772.
Ghosh, S., Cimino, J. G., Scott, A. K., Damen, F. W., Phillips, E. H., Veress, A. I., Neu, C. P., & Goergen, C. J. (2017). . ACS biomaterials science & engineering, 3(11), 2798-2805. https://doi.org/10.1021/acsbiomaterials.6b00772
Ghosh, Soham, et al. "." ACS biomaterials science & engineering vol. 3,11 (2017): 2798-2805. doi: https://doi.org/10.1021/acsbiomaterials.6b00772
Ghosh S, Cimino JG, Scott AK, Damen FW, Phillips EH, Veress AI, Neu CP, Goergen CJ. . ACS Biomater Sci Eng. 2017 Nov 13;3(11):2798-2805. doi: 10.1021/acsbiomaterials.6b00772. Epub 2017 Feb 17. PMID: 29276759; PMCID: PMC5737751.
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Outplanting technique, host genotype, and site affect the initial success of outplanted .

PeerJ

Goergen EA, Gilliam DS.
PMID: 29507829
PeerJ. 2018 Feb 28;6:e4433. doi: 10.7717/peerj.4433. eCollection 2018.

No abstract available.

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Goergen EA, Gilliam DS. Outplanting technique, host genotype, and site affect the initial success of outplanted . PeerJ. 2018;6:e4433doi: 10.7717/peerj.4433.
Goergen, E. A., & Gilliam, D. S. (2018). Outplanting technique, host genotype, and site affect the initial success of outplanted . PeerJ, 6e4433. https://doi.org/10.7717/peerj.4433
Goergen, Elizabeth A, and Gilliam, David S. "Outplanting technique, host genotype, and site affect the initial success of outplanted ." PeerJ vol. 6 (2018): e4433. doi: https://doi.org/10.7717/peerj.4433
Goergen EA, Gilliam DS. Outplanting technique, host genotype, and site affect the initial success of outplanted . PeerJ. 2018 Feb 28;6:e4433. doi: 10.7717/peerj.4433. eCollection 2018. PMID: 29507829; PMCID: PMC5834935.
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Involved-Field Radiation Therapy Prevents Recurrences in the Early Stages of Hodgkin Lymphoma in PET-Negative Patients After ABVD Chemotherapy: Relapse Analysis of GHSG Phase 3 HD16 Trial.

International journal of radiation oncology, biology, physics

Baues C, Goergen H, Fuchs M, Rosenbrock J, Celik E, Eich H, Kobe C, Voltin CA, Engert A, Borchmann P, Marnitz S.
PMID: 34389407
Int J Radiat Oncol Biol Phys. 2021 Nov 15;111(4):900-906. doi: 10.1016/j.ijrobp.2021.07.1697. Epub 2021 Aug 11.

PURPOSE: The HD16 trial of the German Hodgkin Study Group (NCT00736320) demonstrated that radiation therapy in early-stage Hodgkin lymphoma without risk factors cannot be safely omitted, and therefore combined modality therapy (CMT) remains the standard treatment. To demonstrate the...

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Baues C, Goergen H, Fuchs M, et al. Involved-Field Radiation Therapy Prevents Recurrences in the Early Stages of Hodgkin Lymphoma in PET-Negative Patients After ABVD Chemotherapy: Relapse Analysis of GHSG Phase 3 HD16 Trial. Int J Radiat Oncol Biol Phys. 2021;111(4):900-906doi: 10.1016/j.ijrobp.2021.07.1697.
Baues, C., Goergen, H., Fuchs, M., Rosenbrock, J., Celik, E., Eich, H., Kobe, C., Voltin, C. A., Engert, A., Borchmann, P., & Marnitz, S. (2021). Involved-Field Radiation Therapy Prevents Recurrences in the Early Stages of Hodgkin Lymphoma in PET-Negative Patients After ABVD Chemotherapy: Relapse Analysis of GHSG Phase 3 HD16 Trial. International journal of radiation oncology, biology, physics, 111(4), 900-906. https://doi.org/10.1016/j.ijrobp.2021.07.1697
Baues, Christian, et al. "Involved-Field Radiation Therapy Prevents Recurrences in the Early Stages of Hodgkin Lymphoma in PET-Negative Patients After ABVD Chemotherapy: Relapse Analysis of GHSG Phase 3 HD16 Trial." International journal of radiation oncology, biology, physics vol. 111,4 (2021): 900-906. doi: https://doi.org/10.1016/j.ijrobp.2021.07.1697
Baues C, Goergen H, Fuchs M, Rosenbrock J, Celik E, Eich H, Kobe C, Voltin CA, Engert A, Borchmann P, Marnitz S. Involved-Field Radiation Therapy Prevents Recurrences in the Early Stages of Hodgkin Lymphoma in PET-Negative Patients After ABVD Chemotherapy: Relapse Analysis of GHSG Phase 3 HD16 Trial. Int J Radiat Oncol Biol Phys. 2021 Nov 15;111(4):900-906. doi: 10.1016/j.ijrobp.2021.07.1697. Epub 2021 Aug 11. PMID: 34389407.
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German S1 guideline: diagnosis and treatment of livedovasculopathy.

Journal der Deutschen Dermatologischen Gesellschaft = Journal of the German Society of Dermatology : JDDG

Schiffmann ML, Dissemond J, Erfurt-Berge C, Hafner J, Itzlinger-Monshi BA, Jungkunz HW, Kahle B, Kreuter A, Scharffetter-Kochanek K, Lutze S, Rappersberger K, Schneider SW, Strölin A, Sunderkötter C, Goerge T.
PMID: 34739187
J Dtsch Dermatol Ges. 2021 Nov;19(11):1668-1678. doi: 10.1111/ddg.14520. Epub 2021 Nov 05.

No abstract available.

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Schiffmann ML, Dissemond J, Erfurt-Berge C, et al. German S1 guideline: diagnosis and treatment of livedovasculopathy. J Dtsch Dermatol Ges. 2021;19(11):1668-1678doi: 10.1111/ddg.14520.
Schiffmann, M. L., Dissemond, J., Erfurt-Berge, C., Hafner, J., Itzlinger-Monshi, B. A., Jungkunz, H. W., Kahle, B., Kreuter, A., Scharffetter-Kochanek, K., Lutze, S., Rappersberger, K., Schneider, S. W., Strölin, A., Sunderkötter, C., & Goerge, T. (2021). German S1 guideline: diagnosis and treatment of livedovasculopathy. Journal der Deutschen Dermatologischen Gesellschaft = Journal of the German Society of Dermatology : JDDG, 19(11), 1668-1678. https://doi.org/10.1111/ddg.14520
Schiffmann, Marie-Luise, et al. "German S1 guideline: diagnosis and treatment of livedovasculopathy." Journal der Deutschen Dermatologischen Gesellschaft = Journal of the German Society of Dermatology : JDDG vol. 19,11 (2021): 1668-1678. doi: https://doi.org/10.1111/ddg.14520
Schiffmann ML, Dissemond J, Erfurt-Berge C, Hafner J, Itzlinger-Monshi BA, Jungkunz HW, Kahle B, Kreuter A, Scharffetter-Kochanek K, Lutze S, Rappersberger K, Schneider SW, Strölin A, Sunderkötter C, Goerge T. German S1 guideline: diagnosis and treatment of livedovasculopathy. J Dtsch Dermatol Ges. 2021 Nov;19(11):1668-1678. doi: 10.1111/ddg.14520. Epub 2021 Nov 05. PMID: 34739187.
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Motion Artifact Reduction In Photoplethysmography For Reliable Signal Selection.

Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference

Mao R, Tweardy M, Wegerich SW, Goergen CJ, Wodicka GR, Zhu F.
PMID: 34892399
Annu Int Conf IEEE Eng Med Biol Soc. 2021 Nov;2021:5625-5630. doi: 10.1109/EMBC46164.2021.9630595.

Photoplethysmography (PPG) is a non-invasive and economical technique to extract vital signs of the human body. Although it has been widely used in consumer and research grade wrist devices to track a user's physiology, the PPG signal is very...

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Mao R, Tweardy M, Wegerich SW, et al. Motion Artifact Reduction In Photoplethysmography For Reliable Signal Selection. Annu Int Conf IEEE Eng Med Biol Soc. 2021;2021:5625-5630doi: 10.1109/EMBC46164.2021.9630595.
Mao, R., Tweardy, M., Wegerich, S. W., Goergen, C. J., Wodicka, G. R., & Zhu, F. (2021). Motion Artifact Reduction In Photoplethysmography For Reliable Signal Selection. Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference, 20215625-5630. https://doi.org/10.1109/EMBC46164.2021.9630595
Mao, Runyu, et al. "Motion Artifact Reduction In Photoplethysmography For Reliable Signal Selection." Annual International Conference of the IEEE Engineering in Medicine and Biology Society. IEEE Engineering in Medicine and Biology Society. Annual International Conference vol. 2021 (2021): 5625-5630. doi: https://doi.org/10.1109/EMBC46164.2021.9630595
Mao R, Tweardy M, Wegerich SW, Goergen CJ, Wodicka GR, Zhu F. Motion Artifact Reduction In Photoplethysmography For Reliable Signal Selection. Annu Int Conf IEEE Eng Med Biol Soc. 2021 Nov;2021:5625-5630. doi: 10.1109/EMBC46164.2021.9630595. PMID: 34892399.
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CHFR and Paclitaxel Sensitivity of Ovarian Cancer.

Cancers

Wahner Hendrickson AE, Visscher DW, Hou X, Goergen KM, Atkinson HJ, Beito TG, Negron V, Lingle WL, Bruzek AK, Hurley RM, Wagner JM, Flatten KS, Peterson KL, Schneider PA, Larson MC, Maurer MJ, Kalli KR, Oberg AL, Weroha SJ, Kaufmann SH.
PMID: 34885153
Cancers (Basel). 2021 Nov 30;13(23). doi: 10.3390/cancers13236043.

The poly(ADP-ribose) binding protein CHFR regulates cellular responses to mitotic stress. The deubiquitinase UBC13, which regulates CHFR levels, has been associated with better overall survival in paclitaxel-treated ovarian cancer. Despite the extensive use of taxanes in the treatment of...

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Wahner Hendrickson AE, Visscher DW, Hou X, et al. CHFR and Paclitaxel Sensitivity of Ovarian Cancer. Cancers (Basel). 2021;13(23)doi: 10.3390/cancers13236043.
Wahner Hendrickson, A. E., Visscher, D. W., Hou, X., Goergen, K. M., Atkinson, H. J., Beito, T. G., Negron, V., Lingle, W. L., Bruzek, A. K., Hurley, R. M., Wagner, J. M., Flatten, K. S., Peterson, K. L., Schneider, P. A., Larson, M. C., Maurer, M. J., Kalli, K. R., Oberg, A. L., Weroha, S. J., & Kaufmann, S. H. (2021). CHFR and Paclitaxel Sensitivity of Ovarian Cancer. Cancers, 13(23), . https://doi.org/10.3390/cancers13236043
Wahner Hendrickson, Andrea E, et al. "CHFR and Paclitaxel Sensitivity of Ovarian Cancer." Cancers vol. 13,23 (2021). doi: https://doi.org/10.3390/cancers13236043
Wahner Hendrickson AE, Visscher DW, Hou X, Goergen KM, Atkinson HJ, Beito TG, Negron V, Lingle WL, Bruzek AK, Hurley RM, Wagner JM, Flatten KS, Peterson KL, Schneider PA, Larson MC, Maurer MJ, Kalli KR, Oberg AL, Weroha SJ, Kaufmann SH. CHFR and Paclitaxel Sensitivity of Ovarian Cancer. Cancers (Basel). 2021 Nov 30;13(23). doi: 10.3390/cancers13236043. PMID: 34885153.
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Translating mouse models of abdominal aortic aneurysm to the translational needs of vascular surgery.

JVS-vascular science

Busch A, Bleichert S, Ibrahim N, Wortmann M, Eckstein HH, Brostjan C, Wagenhäuser MU, Goergen CJ, Maegdefessel L.
PMID: 34778850
JVS Vasc Sci. 2021 Mar 03;2:219-234. doi: 10.1016/j.jvssci.2021.01.002. eCollection 2021.

INTRODUCTION: Abdominal aortic aneurysm (AAA) is a condition that has considerable socioeconomic impact and an eventual rupture is associated with high mortality and morbidity. Despite decades of research, surgical repair remains the treatment of choice and no medical therapy...

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Busch A, Bleichert S, Ibrahim N, et al. Translating mouse models of abdominal aortic aneurysm to the translational needs of vascular surgery. JVS Vasc Sci. 2021;2:219-234doi: 10.1016/j.jvssci.2021.01.002.
Busch, A., Bleichert, S., Ibrahim, N., Wortmann, M., Eckstein, H. H., Brostjan, C., Wagenhäuser, M. U., Goergen, C. J., & Maegdefessel, L. (2021). Translating mouse models of abdominal aortic aneurysm to the translational needs of vascular surgery. JVS-vascular science, 2219-234. https://doi.org/10.1016/j.jvssci.2021.01.002
Busch, Albert, et al. "Translating mouse models of abdominal aortic aneurysm to the translational needs of vascular surgery." JVS-vascular science vol. 2 (2021): 219-234. doi: https://doi.org/10.1016/j.jvssci.2021.01.002
Busch A, Bleichert S, Ibrahim N, Wortmann M, Eckstein HH, Brostjan C, Wagenhäuser MU, Goergen CJ, Maegdefessel L. Translating mouse models of abdominal aortic aneurysm to the translational needs of vascular surgery. JVS Vasc Sci. 2021 Mar 03;2:219-234. doi: 10.1016/j.jvssci.2021.01.002. eCollection 2021. PMID: 34778850; PMCID: PMC8577080.
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Octanoate is differentially metabolized in liver and muscle and fails to rescue cardiomyopathy in CPT2 deficiency.

Journal of lipid research

Pereyra AS, Harris KL, Soepriatna AH, Waterbury QA, Bharathi SS, Zhang Y, Fisher-Wellman KH, Goergen CJ, Goetzman ES, Ellis JM.
PMID: 33757734
J Lipid Res. 2021;62:100069. doi: 10.1016/j.jlr.2021.100069. Epub 2021 Mar 20.

Long-chain fatty acid oxidation is frequently impaired in primary and systemic metabolic diseases affecting the heart; thus, therapeutically increasing reliance on normally minor energetic substrates, such as ketones and medium-chain fatty acids, could benefit cardiac health. However, the molecular...

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Pereyra AS, Harris KL, Soepriatna AH, et al. Octanoate is differentially metabolized in liver and muscle and fails to rescue cardiomyopathy in CPT2 deficiency. J Lipid Res. 2021;62:100069doi: 10.1016/j.jlr.2021.100069.
Pereyra, A. S., Harris, K. L., Soepriatna, A. H., Waterbury, Q. A., Bharathi, S. S., Zhang, Y., Fisher-Wellman, K. H., Goergen, C. J., Goetzman, E. S., & Ellis, J. M. (2021). Octanoate is differentially metabolized in liver and muscle and fails to rescue cardiomyopathy in CPT2 deficiency. Journal of lipid research, 62100069. https://doi.org/10.1016/j.jlr.2021.100069
Pereyra, Andrea S, et al. "Octanoate is differentially metabolized in liver and muscle and fails to rescue cardiomyopathy in CPT2 deficiency." Journal of lipid research vol. 62 (2021): 100069. doi: https://doi.org/10.1016/j.jlr.2021.100069
Pereyra AS, Harris KL, Soepriatna AH, Waterbury QA, Bharathi SS, Zhang Y, Fisher-Wellman KH, Goergen CJ, Goetzman ES, Ellis JM. Octanoate is differentially metabolized in liver and muscle and fails to rescue cardiomyopathy in CPT2 deficiency. J Lipid Res. 2021;62:100069. doi: 10.1016/j.jlr.2021.100069. Epub 2021 Mar 20. PMID: 33757734; PMCID: PMC8082564.
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Revision of the Afrotropical species of the hover fly genus .

ZooKeys

Jordaens K, Goergen G, Skevington JH, Kelso S, Meyer M.
PMID: 34239337
Zookeys. 2021 Jun 21;1046:1-141. doi: 10.3897/zookeys.1046.57052. eCollection 2021.

The Afrotropical representatives of the hover fly genus

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Jordaens K, Goergen G, Skevington JH, et al. Revision of the Afrotropical species of the hover fly genus . Zookeys. 2021;1046:1-141doi: 10.3897/zookeys.1046.57052.
Jordaens, K., Goergen, G., Skevington, J. H., Kelso, S., & Meyer, M. (2021). Revision of the Afrotropical species of the hover fly genus . ZooKeys, 10461-141. https://doi.org/10.3897/zookeys.1046.57052
Jordaens, Kurt, et al. "Revision of the Afrotropical species of the hover fly genus ." ZooKeys vol. 1046 (2021): 1-141. doi: https://doi.org/10.3897/zookeys.1046.57052
Jordaens K, Goergen G, Skevington JH, Kelso S, Meyer M. Revision of the Afrotropical species of the hover fly genus . Zookeys. 2021 Jun 21;1046:1-141. doi: 10.3897/zookeys.1046.57052. eCollection 2021. PMID: 34239337; PMCID: PMC8238928.
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