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Poster 135 Sonographic Evaluation of the Achilles and Patellar Tendons in Runners.

PM & R : the journal of injury, function, and rehabilitation

Santiago BR, Irizarry FS, Acevedo R, Miranda G, Micheo WF, Baerga L.
PMID: 27672900
PM R. 2016 Sep;8(9):S205-S206. doi: 10.1016/j.pmrj.2016.07.177. Epub 2016 Sep 24.

No abstract available.

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Santiago BR, Irizarry FS, Acevedo R, et al. Poster 135 Sonographic Evaluation of the Achilles and Patellar Tendons in Runners. PM R. 2016;8(9):S205-S206doi: 10.1016/j.pmrj.2016.07.177.
Santiago, B. R., Irizarry, F. S., Acevedo, R., Miranda, G., Micheo, W. F., & Baerga, L. (2016). Poster 135 Sonographic Evaluation of the Achilles and Patellar Tendons in Runners. PM & R : the journal of injury, function, and rehabilitation, 8(9), S205-S206. https://doi.org/10.1016/j.pmrj.2016.07.177
Santiago, Belmarie Rodriguez, et al. "Poster 135 Sonographic Evaluation of the Achilles and Patellar Tendons in Runners." PM & R : the journal of injury, function, and rehabilitation vol. 8,9 (2016): S205-S206. doi: https://doi.org/10.1016/j.pmrj.2016.07.177
Santiago BR, Irizarry FS, Acevedo R, Miranda G, Micheo WF, Baerga L. Poster 135 Sonographic Evaluation of the Achilles and Patellar Tendons in Runners. PM R. 2016 Sep;8(9):S205-S206. doi: 10.1016/j.pmrj.2016.07.177. Epub 2016 Sep 24. PMID: 27672900.
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Erratum: New GOLD classification: longitudinal data on group assignment.

Respiratory research

Casanova C, Marin JM, Martinez-Gonzalez C, de Lucas-Ramos P, Mir-Viladrich I, Cosio B, Peces-Barba G, Calle-Rubio M, Solanes-García I, Agüero R, de Diego-Damia A, Feu-Collado N, Alfageme I, Irigaray R, Balcells E, Llunel A, Galdiz-Iturri JB, Marín M, Soler JJ, Lopez-Campos JL, Soriano JB, de-Torres JP.
PMID: 25928132
Respir Res. 2014 Dec 11;15:140. doi: 10.1186/s12931-014-0140-z.

No abstract available.

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Casanova C, Marin JM, Martinez-Gonzalez C, et al. Erratum: New GOLD classification: longitudinal data on group assignment. Respir Res. 2014;15:140doi: 10.1186/s12931-014-0140-z.
Casanova, C., Marin, J. M., Martinez-Gonzalez, C., de Lucas-Ramos, P., Mir-Viladrich, I., Cosio, B., Peces-Barba, G., Calle-Rubio, M., Solanes-García, I., Agüero, R., de Diego-Damia, A., Feu-Collado, N., Alfageme, I., Irigaray, R., Balcells, E., Llunel, A., Galdiz-Iturri, J. B., Marín, M., Soler, J. J., Lopez-Campos, J. L., Soriano, J. B., de-Torres, J. P. (2014). Erratum: New GOLD classification: longitudinal data on group assignment. Respiratory research, 15140. https://doi.org/10.1186/s12931-014-0140-z
Casanova, Ciro, et al. "Erratum: New GOLD classification: longitudinal data on group assignment." Respiratory research vol. 15 (2014): 140. doi: https://doi.org/10.1186/s12931-014-0140-z
Casanova C, Marin JM, Martinez-Gonzalez C, de Lucas-Ramos P, Mir-Viladrich I, Cosio B, Peces-Barba G, Calle-Rubio M, Solanes-García I, Agüero R, de Diego-Damia A, Feu-Collado N, Alfageme I, Irigaray R, Balcells E, Llunel A, Galdiz-Iturri JB, Marín M, Soler JJ, Lopez-Campos JL, Soriano JB, de-Torres JP. Erratum: New GOLD classification: longitudinal data on group assignment. Respir Res. 2014 Dec 11;15:140. doi: 10.1186/s12931-014-0140-z. PMID: 25928132; PMCID: PMC4262992.
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How we implemented an analytical support clinic to strengthen student research capacity in Zambia.

Medical teacher

Andrews B, Musonda P, Simuyemba M, Wilson CM, Nzala S, Vermund SH, Michelo C, Riegle-Crumb C, Irizarry Y.
PMID: 25496713
Med Teach. 2015 Jul;37(7):635-640. doi: 10.3109/0142159X.2014.990875. Epub 2014 Dec 11.

BACKGROUND: Research outputs in sub-Saharan Africa may be limited by a scarcity of clinical research expertise. In Zambia, clinical and biomedical postgraduate students are often delayed in graduation due to challenges in completing their research dissertations. We sought to...

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Andrews B, Musonda P, Simuyemba M, et al. How we implemented an analytical support clinic to strengthen student research capacity in Zambia. Med Teach. 2014;37(7):635-640doi: 10.3109/0142159X.2014.990875.
Andrews, B., Musonda, P., Simuyemba, M., Wilson, C. M., Nzala, S., Vermund, S. H., Michelo, C., Riegle-Crumb, C., & Irizarry, Y. (2015). How we implemented an analytical support clinic to strengthen student research capacity in Zambia. Medical teacher, 37(7), 635-640. https://doi.org/10.3109/0142159X.2014.990875
Andrews, Ben, et al. "How we implemented an analytical support clinic to strengthen student research capacity in Zambia." Medical teacher vol. 37,7 (2015): 635-640. doi: https://doi.org/10.3109/0142159X.2014.990875
Andrews B, Musonda P, Simuyemba M, Wilson CM, Nzala S, Vermund SH, Michelo C, Riegle-Crumb C, Irizarry Y. How we implemented an analytical support clinic to strengthen student research capacity in Zambia. Med Teach. 2015 Jul;37(7):635-640. doi: 10.3109/0142159X.2014.990875. Epub 2014 Dec 11. PMID: 25496713; PMCID: PMC4833634.
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HAART toxicity masquerading as a surgical abdomen.

International journal of surgery case reports

Feghali A, Wang Y, Irizarry E, Lueders M.
PMID: 26686487
Int J Surg Case Rep. 2016;18:33-6. doi: 10.1016/j.ijscr.2015.11.028. Epub 2015 Dec 03.

INTRODUCTION: Intussusception is a rare disease in adults and poses a challenge to identify and manage. In adults, surgical resection is the preferred treatment since half are due to malignancy. This case reveals an association between highly active antiretroviral...

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Feghali A, Wang Y, Irizarry E, et al. HAART toxicity masquerading as a surgical abdomen. Int J Surg Case Rep. 2015;18:33-6doi: 10.1016/j.ijscr.2015.11.028.
Feghali, A., Wang, Y., Irizarry, E., & Lueders, M. (2016). HAART toxicity masquerading as a surgical abdomen. International journal of surgery case reports, 1833-6. https://doi.org/10.1016/j.ijscr.2015.11.028
Feghali, Anthony, et al. "HAART toxicity masquerading as a surgical abdomen." International journal of surgery case reports vol. 18 (2016): 33-6. doi: https://doi.org/10.1016/j.ijscr.2015.11.028
Feghali A, Wang Y, Irizarry E, Lueders M. HAART toxicity masquerading as a surgical abdomen. Int J Surg Case Rep. 2016;18:33-6. doi: 10.1016/j.ijscr.2015.11.028. Epub 2015 Dec 03. PMID: 26686487; PMCID: PMC4701868.
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Utilizing Multidimensional Measures of Race in Education Research: The Case of Teacher Perceptions.

Sociology of race and ethnicity (Thousand Oaks, Calif.)

Irizarry Y.
PMID: 26413559
Sociol Race Ethn (Thousand Oaks). 2015 Oct;1(4):564-583. doi: 10.1177/2332649215580350.

Education scholarship on race using quantitative data analysis consists largely of studies on the black-white dichotomy, and more recently, on the experiences of student within conventional racial/ethnic categories (white, Hispanic/Latina/o, Asian, black). Despite substantial shifts in the racial and...

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Irizarry Y. Utilizing Multidimensional Measures of Race in Education Research: The Case of Teacher Perceptions. Sociol Race Ethn (Thousand Oaks). 2015;1(4):564-583doi: 10.1177/2332649215580350.
Irizarry, Y. (2015). Utilizing Multidimensional Measures of Race in Education Research: The Case of Teacher Perceptions. Sociology of race and ethnicity (Thousand Oaks, Calif.), 1(4), 564-583. https://doi.org/10.1177/2332649215580350
Irizarry, Yasmiyn. "Utilizing Multidimensional Measures of Race in Education Research: The Case of Teacher Perceptions." Sociology of race and ethnicity (Thousand Oaks, Calif.) vol. 1,4 (2015): 564-583. doi: https://doi.org/10.1177/2332649215580350
Irizarry Y. Utilizing Multidimensional Measures of Race in Education Research: The Case of Teacher Perceptions. Sociol Race Ethn (Thousand Oaks). 2015 Oct;1(4):564-583. doi: 10.1177/2332649215580350. PMID: 26413559; PMCID: PMC4580251.
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Bioconductor: open software development for computational biology and bioinformatics.

Genome biology

Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J.
PMID: 15461798
Genome Biol. 2004;5(10):R80. doi: 10.1186/gb-2004-5-10-r80. Epub 2004 Sep 15.

The Bioconductor project is an initiative for the collaborative creation of extensible software for computational biology and bioinformatics. The goals of the project include: fostering collaborative development and widespread use of innovative software, reducing barriers to entry into interdisciplinary...

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Gentleman RC, Carey VJ, Bates DM, et al. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 2004;5(10):R80doi: 10.1186/gb-2004-5-10-r80.
Gentleman, R. C., Carey, V. J., Bates, D. M., Bolstad, B., Dettling, M., Dudoit, S., Ellis, B., Gautier, L., Ge, Y., Gentry, J., Hornik, K., Hothorn, T., Huber, W., Iacus, S., Irizarry, R., Leisch, F., Li, C., Maechler, M., Rossini, A. J., Sawitzki, G., Smith, C., Smyth, G., Tierney, L., Yang, J. Y., & Zhang, J. (2004). Bioconductor: open software development for computational biology and bioinformatics. Genome biology, 5(10), R80. https://doi.org/10.1186/gb-2004-5-10-r80
Gentleman, Robert C, et al. "Bioconductor: open software development for computational biology and bioinformatics." Genome biology vol. 5,10 (2004): R80. doi: https://doi.org/10.1186/gb-2004-5-10-r80
Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 2004;5(10):R80. doi: 10.1186/gb-2004-5-10-r80. Epub 2004 Sep 15. PMID: 15461798; PMCID: PMC545600.
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Using the R Package crlmm for Genotyping and Copy Number Estimation.

Journal of statistical software

Scharpf RB, Irizarry RA, Ritchie ME, Carvalho B, Ruczinski I.
PMID: 22523482
J Stat Softw. 2011 May 01;40(12):1-32.

Genotyping platforms such as Affymetrix can be used to assess genotype-phenotype as well as copy number-phenotype associations at millions of markers. While genotyping algorithms are largely concordant when assessed on HapMap samples, tools to assess copy number changes are...

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Scharpf RB, Irizarry RA, Ritchie ME, et al. Using the R Package crlmm for Genotyping and Copy Number Estimation. J Stat Softw. 2011;40(12):1-32
Scharpf, R. B., Irizarry, R. A., Ritchie, M. E., Carvalho, B., & Ruczinski, I. (2011). Using the R Package crlmm for Genotyping and Copy Number Estimation. Journal of statistical software, 40(12), 1-32.
Scharpf, Robert B, et al. "Using the R Package crlmm for Genotyping and Copy Number Estimation." Journal of statistical software vol. 40,12 (2011): 1-32.
Scharpf RB, Irizarry RA, Ritchie ME, Carvalho B, Ruczinski I. Using the R Package crlmm for Genotyping and Copy Number Estimation. J Stat Softw. 2011 May 01;40(12):1-32. PMID: 22523482; PMCID: PMC3329223.
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HISTORICAL CONTAMINATION OF GROUNDWATER RESOURCES IN THE NORTH COAST KARST AQUIFERS OF PUERTO RICO.

Revista dimension

Padilla I, Irizarry C, Steele K.
PMID: 24772197
Rev Dimens. 2011 Jan 01;3:7-12.

The North Coast Karst Aquifer System of Puerto Rico is the island's most productive aquifer. The characteristics that make it highly productive also make it vulnerable to contamination. This research, which addresses the historical contamination of groundwater resources in...

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Padilla I, Irizarry C, Steele K. HISTORICAL CONTAMINATION OF GROUNDWATER RESOURCES IN THE NORTH COAST KARST AQUIFERS OF PUERTO RICO. Rev Dimens. 2011;3:7-12
Padilla, I., Irizarry, C., & Steele, K. (2011). HISTORICAL CONTAMINATION OF GROUNDWATER RESOURCES IN THE NORTH COAST KARST AQUIFERS OF PUERTO RICO. Revista dimension, 37-12.
Padilla, Ingrid, et al. "HISTORICAL CONTAMINATION OF GROUNDWATER RESOURCES IN THE NORTH COAST KARST AQUIFERS OF PUERTO RICO." Revista dimension vol. 3 (2011): 7-12.
Padilla I, Irizarry C, Steele K. HISTORICAL CONTAMINATION OF GROUNDWATER RESOURCES IN THE NORTH COAST KARST AQUIFERS OF PUERTO RICO. Rev Dimens. 2011 Jan 01;3:7-12. PMID: 24772197; PMCID: PMC3999440.
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An Improved Humanized Mouse Model for Excisional Wound Healing Using Double Transgenic Mice.

Advances in wound care

Hu MS, Cheng J, Borrelli MR, Leavitt T, Walmsley GG, Zielins ER, Hong WX, Cheung ATM, Duscher D, Maan ZN, Irizarry DM, Stephan B, Parsa FD, Wan DC, Gurtner GC, Lorenz HP, Longaker MT.
PMID: 29344430
Adv Wound Care (New Rochelle). 2018 Jan 01;7(1):11-17. doi: 10.1089/wound.2017.0772.

No abstract available.

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Hu MS, Cheng J, Borrelli MR, et al. An Improved Humanized Mouse Model for Excisional Wound Healing Using Double Transgenic Mice. Adv Wound Care (New Rochelle). 2018;7(1):11-17doi: 10.1089/wound.2017.0772.
Hu, M. S., Cheng, J., Borrelli, M. R., Leavitt, T., Walmsley, G. G., Zielins, E. R., Hong, W. X., Cheung, A. T. M., Duscher, D., Maan, Z. N., Irizarry, D. M., Stephan, B., Parsa, F. D., Wan, D. C., Gurtner, G. C., Lorenz, H. P., & Longaker, M. T. (2018). An Improved Humanized Mouse Model for Excisional Wound Healing Using Double Transgenic Mice. Advances in wound care, 7(1), 11-17. https://doi.org/10.1089/wound.2017.0772
Hu, Michael S, et al. "An Improved Humanized Mouse Model for Excisional Wound Healing Using Double Transgenic Mice." Advances in wound care vol. 7,1 (2018): 11-17. doi: https://doi.org/10.1089/wound.2017.0772
Hu MS, Cheng J, Borrelli MR, Leavitt T, Walmsley GG, Zielins ER, Hong WX, Cheung ATM, Duscher D, Maan ZN, Irizarry DM, Stephan B, Parsa FD, Wan DC, Gurtner GC, Lorenz HP, Longaker MT. An Improved Humanized Mouse Model for Excisional Wound Healing Using Double Transgenic Mice. Adv Wound Care (New Rochelle). 2018 Jan 01;7(1):11-17. doi: 10.1089/wound.2017.0772. PMID: 29344430; PMCID: PMC5770115.
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Capturing discrete latent structures: choose LDs over PCs.

Biostatistics (Oxford, England)

Alexander TA, Irizarry RA, Bravo HC.
PMID: 34467372
Biostatistics. 2021 Sep 01; doi: 10.1093/biostatistics/kxab030. Epub 2021 Sep 01.

High-dimensional biological data collection across heterogeneous groups of samples has become increasingly common, creating high demand for dimensionality reduction techniques that capture underlying structure of the data. Discovering low-dimensional embeddings that describe the separation of any underlying discrete latent...

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Alexander TA, Irizarry RA, Bravo HC. Capturing discrete latent structures: choose LDs over PCs. Biostatistics. 2021;doi: 10.1093/biostatistics/kxab030.
Alexander, T. A., Irizarry, R. A., & Bravo, H. C. (2021). Capturing discrete latent structures: choose LDs over PCs. Biostatistics (Oxford, England), . https://doi.org/10.1093/biostatistics/kxab030
Alexander, Theresa A, et al. "Capturing discrete latent structures: choose LDs over PCs." Biostatistics (Oxford, England) vol. (2021). doi: https://doi.org/10.1093/biostatistics/kxab030
Alexander TA, Irizarry RA, Bravo HC. Capturing discrete latent structures: choose LDs over PCs. Biostatistics. 2021 Sep 01; doi: 10.1093/biostatistics/kxab030. Epub 2021 Sep 01. PMID: 34467372.
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Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity.

Cell

Schnell A, Huang L, Singer M, Singaraju A, Barilla RM, Regan BML, Bollhagen A, Thakore PI, Dionne D, Delorey TM, Pawlak M, Meyer Zu Horste G, Rozenblatt-Rosen O, Irizarry RA, Regev A, Kuchroo VK.
PMID: 34875227
Cell. 2021 Dec 22;184(26):6281-6298.e23. doi: 10.1016/j.cell.2021.11.018. Epub 2021 Dec 06.

While intestinal Th17 cells are critical for maintaining tissue homeostasis, recent studies have implicated their roles in the development of extra-intestinal autoimmune diseases including multiple sclerosis. However, the mechanisms by which tissue Th17 cells mediate these dichotomous functions remain...

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Schnell A, Huang L, Singer M, et al. Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity. Cell. 2021;184(26):6281-6298.e23doi: 10.1016/j.cell.2021.11.018.
Schnell, A., Huang, L., Singer, M., Singaraju, A., Barilla, R. M., Regan, B. M. L., Bollhagen, A., Thakore, P. I., Dionne, D., Delorey, T. M., Pawlak, M., Meyer Zu Horste, G., Rozenblatt-Rosen, O., Irizarry, R. A., Regev, A., & Kuchroo, V. K. (2021). Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity. Cell, 184(26), 6281-6298.e23. https://doi.org/10.1016/j.cell.2021.11.018
Schnell, Alexandra, et al. "Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity." Cell vol. 184,26 (2021): 6281-6298.e23. doi: https://doi.org/10.1016/j.cell.2021.11.018
Schnell A, Huang L, Singer M, Singaraju A, Barilla RM, Regan BML, Bollhagen A, Thakore PI, Dionne D, Delorey TM, Pawlak M, Meyer Zu Horste G, Rozenblatt-Rosen O, Irizarry RA, Regev A, Kuchroo VK. Stem-like intestinal Th17 cells give rise to pathogenic effector T cells during autoimmunity. Cell. 2021 Dec 22;184(26):6281-6298.e23. doi: 10.1016/j.cell.2021.11.018. Epub 2021 Dec 06. PMID: 34875227.
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Cryptococcal Meningitis.

Current treatment options in neurology

Irizarry L.
PMID: 11487455
Curr Treat Options Neurol. 2001 Sep;3(5):413-426. doi: 10.1007/s11940-001-0029-2.

Cryptococcal meningitis, often seen in immunocompromised hosts, is also a disease of the immune-competent individual. The diagnosis of cryptococcal meningitis requires a lumbar puncture with measurement of the opening pressure, standard laboratory assessment including cell count, protein and glucose,...

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Irizarry L. Cryptococcal Meningitis. Curr Treat Options Neurol. 2001;3(5):413-426doi: 10.1007/s11940-001-0029-2.
Irizarry, L. (2001). Cryptococcal Meningitis. Current treatment options in neurology, 3(5), 413-426. https://doi.org/10.1007/s11940-001-0029-2
Irizarry, Lourdes. "Cryptococcal Meningitis." Current treatment options in neurology vol. 3,5 (2001): 413-426. doi: https://doi.org/10.1007/s11940-001-0029-2
Irizarry L. Cryptococcal Meningitis. Curr Treat Options Neurol. 2001 Sep;3(5):413-426. doi: 10.1007/s11940-001-0029-2. PMID: 11487455.
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Showing 1 to 12 of 75 entries