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Multidimensional annotation of the Escherichia coli K-12 genome

k-12

Karp PD.
GSID: XLhSUGEAtmwJ
PD Karp, IM Keseler, A Shearer… - Nucleic acids …, 2007 - academic.oup.com

… This comparative view shows that K-12 copA is an ortholog of genes with no assigned functions in … for many genes upstream in K-12 and Shigella , but ends at ybaT for K-12 and EDL933. … for many...

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Karp, P. D., Keseler, I. M., Shearer, A., Latendresse, M., Krummenacker, M., Paley, S. M., ... & Ingraham, J. (2007). Multidimensional annotation of the Escherichia coli K-12 genome. Nucleic acids research, 35(22), 7577-7590.
Karp, Peter D., et al. "Multidimensional annotation of the Escherichia coli K-12 genome." Nucleic acids research 35.22 (2007): 7577-7590.
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Effective predictors for surgical decision in antenatal hydronephrosis: a prospective multiparameter analysis.

Turkish journal of urology

Kıllı İ, Avlan D, Taşkınlar H, Kara PP, Apaydın FD, Delibaş A, Nayci A.
PMID: 28861312
Turk J Urol. 2017 Sep;43(3):361-365. doi: 10.5152/tud.2017.81568. Epub 2017 Aug 01.

OBJECTIVE: The majority of antenatal hydronephrosis disappears spontaneously. In our study, we have investigated the effective predictors for surgical decision in antenatal hydronephrosis.MATERIAL AND METHODS: Forty-four patients found to have renal pelvic anteroposterior (AP) diameter more than 10-mm on...

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Kıllı İ, Avlan D, Taşkınlar H, et al. Effective predictors for surgical decision in antenatal hydronephrosis: a prospective multiparameter analysis. Turk J Urol. 2017;43(3):361-365doi: 10.5152/tud.2017.81568.
Kıllı, �. �., Avlan, D., Taşkınlar, H., Kara, P. P., Apaydın, F. D., Delibaş, A., & Nayci, A. (2017). Effective predictors for surgical decision in antenatal hydronephrosis: a prospective multiparameter analysis. Turkish journal of urology, 43(3), 361-365. https://doi.org/10.5152/tud.2017.81568
Kıllı, İsa, et al. "Effective predictors for surgical decision in antenatal hydronephrosis: a prospective multiparameter analysis." Turkish journal of urology vol. 43,3 (2017): 361-365. doi: https://doi.org/10.5152/tud.2017.81568
Kıllı İ, Avlan D, Taşkınlar H, Kara PP, Apaydın FD, Delibaş A, Nayci A. Effective predictors for surgical decision in antenatal hydronephrosis: a prospective multiparameter analysis. Turk J Urol. 2017 Sep;43(3):361-365. doi: 10.5152/tud.2017.81568. Epub 2017 Aug 01. PMID: 28861312; PMCID: PMC5562259.
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Computational Metabolomics Operations at BioCyc.org.

Metabolites

Karp PD, Billington R, Holland TA, Kothari A, Krummenacker M, Weaver D, Latendresse M, Paley S.
PMID: 26011592
Metabolites. 2015 May 22;5(2):291-310. doi: 10.3390/metabo5020291.

BioCyc.org is a genome and metabolic pathway web portal covering 5500 organisms, including Homo sapiens, Arabidopsis thaliana, Saccharomyces cerevisiae and Escherichia coli. These organism-specific databases have undergone variable degrees of curation. The EcoCyc (Escherichia coli Encyclopedia) database is the...

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Karp PD, Billington R, Holland TA, et al. Computational Metabolomics Operations at BioCyc.org. Metabolites. 2015;5(2):291-310doi: 10.3390/metabo5020291.
Karp, P. D., Billington, R., Holland, T. A., Kothari, A., Krummenacker, M., Weaver, D., Latendresse, M., & Paley, S. (2015). Computational Metabolomics Operations at BioCyc.org. Metabolites, 5(2), 291-310. https://doi.org/10.3390/metabo5020291
Karp, Peter D, et al. "Computational Metabolomics Operations at BioCyc.org." Metabolites vol. 5,2 (2015): 291-310. doi: https://doi.org/10.3390/metabo5020291
Karp PD, Billington R, Holland TA, Kothari A, Krummenacker M, Weaver D, Latendresse M, Paley S. Computational Metabolomics Operations at BioCyc.org. Metabolites. 2015 May 22;5(2):291-310. doi: 10.3390/metabo5020291. PMID: 26011592; PMCID: PMC4495374.
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Replication, falsification, and the crisis of confidence in social psychology.

Frontiers in psychology

Earp BD, Trafimow D.
PMID: 26042061
Front Psychol. 2015 May 19;6:621. doi: 10.3389/fpsyg.2015.00621. eCollection 2015.

The (latest) crisis in confidence in social psychology has generated much heated discussion about the importance of replication, including how it should be carried out as well as interpreted by scholars in the field. For example, what does it...

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Earp BD, Trafimow D. Replication, falsification, and the crisis of confidence in social psychology. Front Psychol. 2015;6:621doi: 10.3389/fpsyg.2015.00621.
Earp, B. D., & Trafimow, D. (2015). Replication, falsification, and the crisis of confidence in social psychology. Frontiers in psychology, 6621. https://doi.org/10.3389/fpsyg.2015.00621
Earp, Brian D, and Trafimow, David. "Replication, falsification, and the crisis of confidence in social psychology." Frontiers in psychology vol. 6 (2015): 621. doi: https://doi.org/10.3389/fpsyg.2015.00621
Earp BD, Trafimow D. Replication, falsification, and the crisis of confidence in social psychology. Front Psychol. 2015 May 19;6:621. doi: 10.3389/fpsyg.2015.00621. eCollection 2015. PMID: 26042061; PMCID: PMC4436798.
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ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus.

F1000Research

Karp PD, Berger B, Kovats D, Lengauer T, Linial M, Sabeti P, Hide W, Rost B.
PMID: 26097686
F1000Res. 2015 Jan 15;4:12. doi: 10.12688/f1000research.6038.1. eCollection 2015.

Speed is of the essence in combating Ebola; thus, computational approaches should form a significant component of Ebola research. As for the development of any modern drug, computational biology is uniquely positioned to contribute through comparative analysis of the...

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Karp PD, Berger B, Kovats D, et al. ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus. F1000Res. 2015;4:12doi: 10.12688/f1000research.6038.1.
Karp, P. D., Berger, B., Kovats, D., Lengauer, T., Linial, M., Sabeti, P., Hide, W., & Rost, B. (2015). ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus. F1000Research, 412. https://doi.org/10.12688/f1000research.6038.1
Karp, Peter D, et al. "ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus." F1000Research vol. 4 (2015): 12. doi: https://doi.org/10.12688/f1000research.6038.1
Karp PD, Berger B, Kovats D, Lengauer T, Linial M, Sabeti P, Hide W, Rost B. ISCB Ebola Award for Important Future Research on the Computational Biology of Ebola Virus. F1000Res. 2015 Jan 15;4:12. doi: 10.12688/f1000research.6038.1. eCollection 2015. PMID: 26097686; PMCID: PMC4457108.
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Organochlorine Pesticide-Mediated Induction of NADPH Oxidase and Nitric-Oxide Synthase in Endothelial Cell.

Journal of clinical and diagnostic research : JCDR

Ghosh R, Siddharth M, Singh N, Kare PK, Banerjee BD, Wadhwa N, Tripathi AK.
PMID: 28273962
J Clin Diagn Res. 2017 Jan;11(1):BC09-BC12. doi: 10.7860/JCDR/2017/25276.9315. Epub 2017 Jan 01.

INTRODUCTION: Organochlorine Pesticides (OCPs) are detected ubiquitously in human and have been shown to be associated with Cardiovascular Disease (CVD) and atherosclerosis.AIM: To find out the effect of organochlorine pesticides in endothelial cell with regard to oxidative stress and...

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Ghosh R, Siddharth M, Singh N, et al. Organochlorine Pesticide-Mediated Induction of NADPH Oxidase and Nitric-Oxide Synthase in Endothelial Cell. J Clin Diagn Res. 2017;11(1):BC09-BC12doi: 10.7860/JCDR/2017/25276.9315.
Ghosh, R., Siddharth, M., Singh, N., Kare, P. K., Banerjee, B. D., Wadhwa, N., & Tripathi, A. K. (2017). Organochlorine Pesticide-Mediated Induction of NADPH Oxidase and Nitric-Oxide Synthase in Endothelial Cell. Journal of clinical and diagnostic research : JCDR, 11(1), BC09-BC12. https://doi.org/10.7860/JCDR/2017/25276.9315
Ghosh, Rishila, et al. "Organochlorine Pesticide-Mediated Induction of NADPH Oxidase and Nitric-Oxide Synthase in Endothelial Cell." Journal of clinical and diagnostic research : JCDR vol. 11,1 (2017): BC09-BC12. doi: https://doi.org/10.7860/JCDR/2017/25276.9315
Ghosh R, Siddharth M, Singh N, Kare PK, Banerjee BD, Wadhwa N, Tripathi AK. Organochlorine Pesticide-Mediated Induction of NADPH Oxidase and Nitric-Oxide Synthase in Endothelial Cell. J Clin Diagn Res. 2017 Jan;11(1):BC09-BC12. doi: 10.7860/JCDR/2017/25276.9315. Epub 2017 Jan 01. PMID: 28273962; PMCID: PMC5324407.
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The Effect of Centrally Administered Glibenclamide, Tolbutamide and Diazoxide on Feeding in Rats.

Nutritional neuroscience

Bounds JK, Adloo AA, Harp PR, Olivier K, Roane DS.
PMID: 27415150
Nutr Neurosci. 1999;2(3):155-62. doi: 10.1080/1028415X.1999.11747274.

While there are many theories on the control of feeding behavior that emphasize a role for energy substrates and their metabolism, the mechanism that couples changes in energy substrate supply and metabolism to alterations in food intake remains unclear....

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Bounds JK, Adloo AA, Harp PR, et al. The Effect of Centrally Administered Glibenclamide, Tolbutamide and Diazoxide on Feeding in Rats. Nutr Neurosci. 1999;2(3):155-62doi: 10.1080/1028415X.1999.11747274.
Bounds, J. K., Adloo, A. A., Harp, P. R., Olivier, K., & Roane, D. S. (1999). The Effect of Centrally Administered Glibenclamide, Tolbutamide and Diazoxide on Feeding in Rats. Nutritional neuroscience, 2(3), 155-62. https://doi.org/10.1080/1028415X.1999.11747274
Bounds, J K, et al. "The Effect of Centrally Administered Glibenclamide, Tolbutamide and Diazoxide on Feeding in Rats." Nutritional neuroscience vol. 2,3 (1999): 155-62. doi: https://doi.org/10.1080/1028415X.1999.11747274
Bounds JK, Adloo AA, Harp PR, Olivier K, Roane DS. The Effect of Centrally Administered Glibenclamide, Tolbutamide and Diazoxide on Feeding in Rats. Nutr Neurosci. 1999;2(3):155-62. doi: 10.1080/1028415X.1999.11747274. PMID: 27415150.
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The role of the host in the chemotherapy of tuberculosis.

British medical journal

HART PD.
PMID: 13199303
Br Med J. 1954 Oct 02;2(4891):767-74. doi: 10.1136/bmj.2.4891.767.

No abstract available.

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HART PD. The role of the host in the chemotherapy of tuberculosis. Br Med J. 1954;2(4891):767-74doi: 10.1136/bmj.2.4891.767.
HART, P. D. (1954). The role of the host in the chemotherapy of tuberculosis. British medical journal, 2(4891), 767-74. https://doi.org/10.1136/bmj.2.4891.767
HART, P D. "The role of the host in the chemotherapy of tuberculosis." British medical journal vol. 2,4891 (1954): 767-74. doi: https://doi.org/10.1136/bmj.2.4891.767
HART PD. The role of the host in the chemotherapy of tuberculosis. Br Med J. 1954 Oct 02;2(4891):767-74. doi: 10.1136/bmj.2.4891.767. PMID: 13199303; PMCID: PMC2079112.
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Prevalence of tuberculosis in western Germany.

Lancet (London, England)

DANIELS M, HART PD.
PMID: 18224977
Lancet. 1949 Jan 22;1(6543):157. doi: 10.1016/s0140-6736(49)90440-7.

No abstract available.

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DANIELS M, HART PD. Prevalence of tuberculosis in western Germany. Lancet. 1949;1(6543):157doi: 10.1016/s0140-6736(49)90440-7.
DANIELS, M., & HART, P. D. (1949). Prevalence of tuberculosis in western Germany. Lancet (London, England), 1(6543), 157. https://doi.org/10.1016/s0140-6736(49)90440-7
DANIELS, M, and HART, P D. "Prevalence of tuberculosis in western Germany." Lancet (London, England) vol. 1,6543 (1949): 157. doi: https://doi.org/10.1016/s0140-6736(49)90440-7
DANIELS M, HART PD. Prevalence of tuberculosis in western Germany. Lancet. 1949 Jan 22;1(6543):157. doi: 10.1016/s0140-6736(49)90440-7. PMID: 18224977.
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Tuberculosis in the British zone of Germany.

British medical journal

DANIELS M, HART PD.
PMID: 18904101
Br Med J. 1948 Mar 13;1(4549):508. doi: 10.1136/bmj.1.4549.508.

No abstract available.

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DANIELS M, HART PD. Tuberculosis in the British zone of Germany. Br Med J. 1948;1(4549):508doi: 10.1136/bmj.1.4549.508.
DANIELS, M., & HART, P. D. (1948). Tuberculosis in the British zone of Germany. British medical journal, 1(4549), 508. https://doi.org/10.1136/bmj.1.4549.508
DANIELS, M, and HART, P D. "Tuberculosis in the British zone of Germany." British medical journal vol. 1,4549 (1948): 508. doi: https://doi.org/10.1136/bmj.1.4549.508
DANIELS M, HART PD. Tuberculosis in the British zone of Germany. Br Med J. 1948 Mar 13;1(4549):508. doi: 10.1136/bmj.1.4549.508. PMID: 18904101; PMCID: PMC2089808.
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Reactions of Cl*/Cl2*- radicals with the nanoparticle silica surface and with humic acids: model reactions for the aqueous phase chemistry of the atmosphere.

Photochemistry and photobiology

Caregnato P, Gara PD, Bosio GN, Mártire DO, Gonzalez MC.
PMID: 17645668
Photochem Photobiol. 2007 Jul-Aug;83(4):944-51. doi: 10.1111/j.1751-1097.2007.00087.x.

Reactions of chlorine radicals might play a role in aqueous aerosols where a core of inorganic components containing insulators such as SiO2 and dissolved HUmic-LIke Substances (HULIS) are present. Herein, we report conventional flash photolysis experiments performed to investigate...

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Caregnato P, Gara PD, Bosio GN, et al. Reactions of Cl*/Cl2*- radicals with the nanoparticle silica surface and with humic acids: model reactions for the aqueous phase chemistry of the atmosphere. Photochem Photobiol. 2007;83(4):944-51doi: 10.1111/j.1751-1097.2007.00087.x.
Caregnato, P., Gara, P. D., Bosio, G. N., Mártire, D. O., & Gonzalez, M. C. (2007). Reactions of Cl*/Cl2*- radicals with the nanoparticle silica surface and with humic acids: model reactions for the aqueous phase chemistry of the atmosphere. Photochemistry and photobiology, 83(4), 944-51. https://doi.org/10.1111/j.1751-1097.2007.00087.x
Caregnato, Paula, et al. "Reactions of Cl*/Cl2*- radicals with the nanoparticle silica surface and with humic acids: model reactions for the aqueous phase chemistry of the atmosphere." Photochemistry and photobiology vol. 83,4 (2007): 944-51. doi: https://doi.org/10.1111/j.1751-1097.2007.00087.x
Caregnato P, Gara PD, Bosio GN, Mártire DO, Gonzalez MC. Reactions of Cl*/Cl2*- radicals with the nanoparticle silica surface and with humic acids: model reactions for the aqueous phase chemistry of the atmosphere. Photochem Photobiol. 2007 Jul-Aug;83(4):944-51. doi: 10.1111/j.1751-1097.2007.00087.x. PMID: 17645668.
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Chemotherapeutic measures in tuberculosis; general assessment and current problems.

American review of tuberculosis

HART PD.
PMID: 18114714
Am Rev Tuberc. 1949 Mar;59(3):223-39. doi: 10.1164/art.1949.59.3.223.

No abstract available.

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HART PD. Chemotherapeutic measures in tuberculosis; general assessment and current problems. Am Rev Tuberc. 1949;59(3):223-39doi: 10.1164/art.1949.59.3.223.
HART, P. D. (1949). Chemotherapeutic measures in tuberculosis; general assessment and current problems. American review of tuberculosis, 59(3), 223-39. https://doi.org/10.1164/art.1949.59.3.223
HART, P D. "Chemotherapeutic measures in tuberculosis; general assessment and current problems." American review of tuberculosis vol. 59,3 (1949): 223-39. doi: https://doi.org/10.1164/art.1949.59.3.223
HART PD. Chemotherapeutic measures in tuberculosis; general assessment and current problems. Am Rev Tuberc. 1949 Mar;59(3):223-39. doi: 10.1164/art.1949.59.3.223. PMID: 18114714.
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Showing 1 to 12 of 208 entries