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Cyberinfrastructure, science gateways, campus bridging, and cloud computing

science campus

Stewart CA, Knepper R, Pierce M.
GSID: I1-6Nhf_9AgJ
CA Stewart, R Knepper, MR Link, M Pierce… - … of Information Science …, 2015 - igi-global.com

… This article defines and discusses cyberinfrastructure and the related topics of science gateways and campus bridging; identifies future challenges in cyberinfrastructure; and discusses challenges and opportunities related to the evolution of cyberinfrastructure, “big data” …

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Stewart, C. A., Knepper, R., Link, M. R., Pierce, M., Wernert, E., & Wilkins-Diehr, N. (2015). Cyberinfrastructure, science gateways, campus bridging, and cloud computing. In Encyclopedia of Information Science and Technology, Third Edition (pp. 6562-6572). IGI Global.
Stewart, Craig A., et al. "Cyberinfrastructure, science gateways, campus bridging, and cloud computing." Encyclopedia of Information Science and Technology, Third Edition. IGI Global, 2015. 6562-6572.
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Research Proposal: Barriers to new user and new domain adoption of the XSEDE Cyberinfrastructure

Computer and Information Science and Engineering Minority-Serving Institutions Research Expansion Program AND Program Evaluation

Knepper R.
GSID: AKc0FXgbrhoJ
R Knepper - … on Computer Science and Information Systems …, 2015 - ieeexplore.ieee.org

This research proposal proposes the examination of user attitudes about the Extreme Science and Engineering Discovery Environment (XSEDE). The XSEDE project supports basic research with a common system for making use of national cyberinfrastructure. The systems and infrastructure that...

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Knepper, R. (2015, September). Research Proposal: Barriers to new user and new domain adoption of the XSEDE Cyberinfrastructure. In 2015 Federated Conference on Computer Science and Information Systems (FedCSIS) (pp. 1023-1028). IEEE.
Knepper, Richard. "Research Proposal: Barriers to new user and new domain adoption of the XSEDE Cyberinfrastructure." 2015 Federated Conference on Computer Science and Information Systems (FedCSIS). IEEE, 2015.
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Sympatric diversification as influenced by ecological opportunity and historical contingency in a young species lineage of whitefish

STEM and diversification

Kahilainen K, Knudsen R, Præbel K, Siwertsson A.
GSID: gmHE1qwJ3iQJ
A Siwertsson, R Knudsen, K Kahilainen, K Præbel… - 2010 - munin.uit.no

… in or closely connected with the main stem (Fig. 4). In the Tana watercourse, a similar pattern could not be explored since lakes are generally absent from the main stem. Notably, all six …

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Siwertsson, A., Knudsen, R., Kahilainen, K., Præbel, K., Primicerio, R., & Amundsen, P. A. (2010). Sympatric diversification as influenced by ecological opportunity and historical contingency in a young species lineage of whitefish.
Siwertsson, Anna, et al. "Sympatric diversification as influenced by ecological opportunity and historical contingency in a young species lineage of whitefish." (2010).
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Red Cloud and Aristotle: campus clouds and federations

science campus

Knepper R, Barker B.
GSID: FF6DwKk557kJ
R Knepper, S Mehringer, A Brazier, B Barker… - Proceedings of the …, 2019 - dl.acm.org

… We detail Red Cloud, Cornell’s campus research cloud, and some of the work undertaken by the … campus cloud resources and data sources, supporting a range of science use cases. We discuss the lessons learned from helping researchers...

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Knepper, R., Mehringer, S., Brazier, A., Barker, B., & Reynolds, R. (2019). Red Cloud and Aristotle: campus clouds and federations. In Proceedings of the Humans in the Loop: Enabling and Facilitating Research on Cloud Computing (pp. 1-6).
Knepper, Richard, et al. "Red Cloud and Aristotle: campus clouds and federations." Proceedings of the Humans in the Loop: Enabling and Facilitating Research on Cloud Computing. 2019. 1-6.
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High-efficiency 60 W TEM(00) Nd:YVO(4) oscillator pumped at 888 nm.

Optics letters

McDonagh L, Wallenstein R, Knappe R, Nebel A.
PMID: 17072402
Opt Lett. 2006 Nov 15;31(22):3297-9. doi: 10.1364/ol.31.003297.

We propose a technique for pumping Nd:YVO(4) with high optical power at 888nm while making absorption independent of the pump light polarization state. This is especially suitable for systems end pumped by high-power, high-brightness fiber-coupled diode sources associated with...

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McDonagh L, Wallenstein R, Knappe R, et al. High-efficiency 60 W TEM(00) Nd:YVO(4) oscillator pumped at 888 nm. Opt Lett. 2006;31(22):3297-9doi: 10.1364/ol.31.003297.
McDonagh, L., Wallenstein, R., Knappe, R., & Nebel, A. (2006). High-efficiency 60 W TEM(00) Nd:YVO(4) oscillator pumped at 888 nm. Optics letters, 31(22), 3297-9. https://doi.org/10.1364/ol.31.003297
McDonagh, Louis, et al. "High-efficiency 60 W TEM(00) Nd:YVO(4) oscillator pumped at 888 nm." Optics letters vol. 31,22 (2006): 3297-9. doi: https://doi.org/10.1364/ol.31.003297
McDonagh L, Wallenstein R, Knappe R, Nebel A. High-efficiency 60 W TEM(00) Nd:YVO(4) oscillator pumped at 888 nm. Opt Lett. 2006 Nov 15;31(22):3297-9. doi: 10.1364/ol.31.003297. PMID: 17072402.
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47 W, 6 ns constant pulse duration, high-repetition-rate cavity-dumped Q-switched TEM(00) Nd:YVO(4) oscillator.

Optics letters

McDonagh L, Wallenstein R, Knappe R.
PMID: 17072404
Opt Lett. 2006 Nov 15;31(22):3303-5. doi: 10.1364/ol.31.003303.

We report on a cavity-dumped Q-switched TEM(00) Nd:YVO(4) oscillator offering a unique combination of high power, constant short pulse duration, and high repetition rate, suppressing the gain dependence of pulse duration in classical Q-switched oscillators. Its performance is compared...

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McDonagh L, Wallenstein R, Knappe R. 47 W, 6 ns constant pulse duration, high-repetition-rate cavity-dumped Q-switched TEM(00) Nd:YVO(4) oscillator. Opt Lett. 2006;31(22):3303-5doi: 10.1364/ol.31.003303.
McDonagh, L., Wallenstein, R., & Knappe, R. (2006). 47 W, 6 ns constant pulse duration, high-repetition-rate cavity-dumped Q-switched TEM(00) Nd:YVO(4) oscillator. Optics letters, 31(22), 3303-5. https://doi.org/10.1364/ol.31.003303
McDonagh, Louis, et al. "47 W, 6 ns constant pulse duration, high-repetition-rate cavity-dumped Q-switched TEM(00) Nd:YVO(4) oscillator." Optics letters vol. 31,22 (2006): 3303-5. doi: https://doi.org/10.1364/ol.31.003303
McDonagh L, Wallenstein R, Knappe R. 47 W, 6 ns constant pulse duration, high-repetition-rate cavity-dumped Q-switched TEM(00) Nd:YVO(4) oscillator. Opt Lett. 2006 Nov 15;31(22):3303-5. doi: 10.1364/ol.31.003303. PMID: 17072404.
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Investigation of extraction procedures and HPLC-DAD/MS for the determination of the brominated flame retardant tetrabromobisphenol A bis(2,3-dibromopropylether) in environmental samples.

Analytical and bioanalytical chemistry

Köppen R, Becker R, Jung C, Piechotta C, Nehls I.
PMID: 16552538
Anal Bioanal Chem. 2006 Apr;384(7):1485-92. doi: 10.1007/s00216-006-0339-z. Epub 2006 Mar 21.

A method for the determination of the novel brominated flame retardant tetrabromobisphenol A bis(2,3-dibromopropylether), 1,1'-(isopropylidene)bis[3,5-dibromo-4-(2,3-dibromo-propoxy)-benzene] (TBBPA-dbpe), was developed. Technical TBBPA-dbpe was purified and the results of a thorough physical characterisation are reported. The application of APCI-MS is discussed and...

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Köppen R, Becker R, Jung C, et al. Investigation of extraction procedures and HPLC-DAD/MS for the determination of the brominated flame retardant tetrabromobisphenol A bis(2,3-dibromopropylether) in environmental samples. Anal Bioanal Chem. 2006;384(7):1485-92doi: 10.1007/s00216-006-0339-z.
Köppen, R., Becker, R., Jung, C., Piechotta, C., & Nehls, I. (2006). Investigation of extraction procedures and HPLC-DAD/MS for the determination of the brominated flame retardant tetrabromobisphenol A bis(2,3-dibromopropylether) in environmental samples. Analytical and bioanalytical chemistry, 384(7), 1485-92. https://doi.org/10.1007/s00216-006-0339-z
Köppen, Robert, et al. "Investigation of extraction procedures and HPLC-DAD/MS for the determination of the brominated flame retardant tetrabromobisphenol A bis(2,3-dibromopropylether) in environmental samples." Analytical and bioanalytical chemistry vol. 384,7 (2006): 1485-92. doi: https://doi.org/10.1007/s00216-006-0339-z
Köppen R, Becker R, Jung C, Piechotta C, Nehls I. Investigation of extraction procedures and HPLC-DAD/MS for the determination of the brominated flame retardant tetrabromobisphenol A bis(2,3-dibromopropylether) in environmental samples. Anal Bioanal Chem. 2006 Apr;384(7):1485-92. doi: 10.1007/s00216-006-0339-z. Epub 2006 Mar 21. PMID: 16552538.
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Enantioselective preparative HPLC separation of the HBCD-Stereoisomers from the technical product and their absolute structure elucidation using X-ray crystallography.

Chirality

Koeppen R, Becker R, Emmerling F, Jung C, Nehls I.
PMID: 17226748
Chirality. 2007 Mar;19(3):214-22. doi: 10.1002/chir.20366.

1,2,5,6,9,10-Hexabromocyclododecane (HBCD) is a widely used flame retardant, which tends to persist in the environment and accumulates in biota. The six stereoisomers (three racemates named alpha-, beta-, and gamma-HBCD) of the technical mixture were isolated with high-performance liquid chromatography...

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Koeppen R, Becker R, Emmerling F, et al. Enantioselective preparative HPLC separation of the HBCD-Stereoisomers from the technical product and their absolute structure elucidation using X-ray crystallography. Chirality. 2007;19(3):214-22doi: 10.1002/chir.20366.
Koeppen, R., Becker, R., Emmerling, F., Jung, C., & Nehls, I. (2007). Enantioselective preparative HPLC separation of the HBCD-Stereoisomers from the technical product and their absolute structure elucidation using X-ray crystallography. Chirality, 19(3), 214-22. https://doi.org/10.1002/chir.20366
Koeppen, Robert, et al. "Enantioselective preparative HPLC separation of the HBCD-Stereoisomers from the technical product and their absolute structure elucidation using X-ray crystallography." Chirality vol. 19,3 (2007): 214-22. doi: https://doi.org/10.1002/chir.20366
Koeppen R, Becker R, Emmerling F, Jung C, Nehls I. Enantioselective preparative HPLC separation of the HBCD-Stereoisomers from the technical product and their absolute structure elucidation using X-ray crystallography. Chirality. 2007 Mar;19(3):214-22. doi: 10.1002/chir.20366. PMID: 17226748.
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Colliding shock lens as an intracavity Q-switch element.

Applied optics

Lisi N, Michaelis MM, Buccellato R, Kuppen M, Prause A.
PMID: 21037614
Appl Opt. 1995 Feb 20;34(6):942-5. doi: 10.1364/AO.34.000942.

We show how a varifocal pulsed gas lens, the colliding shock lens, can be used as an intracavity element to Q switch a ruby laser. By placement of the shock lens in tandem with a second lens, a giant...

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Lisi N, Michaelis MM, Buccellato R, et al. Colliding shock lens as an intracavity Q-switch element. Appl Opt. 1995;34(6):942-5doi: 10.1364/AO.34.000942.
Lisi, N., Michaelis, M. M., Buccellato, R., Kuppen, M., & Prause, A. (1995). Colliding shock lens as an intracavity Q-switch element. Applied optics, 34(6), 942-5. https://doi.org/10.1364/AO.34.000942
Lisi, N, et al. "Colliding shock lens as an intracavity Q-switch element." Applied optics vol. 34,6 (1995): 942-5. doi: https://doi.org/10.1364/AO.34.000942
Lisi N, Michaelis MM, Buccellato R, Kuppen M, Prause A. Colliding shock lens as an intracavity Q-switch element. Appl Opt. 1995 Feb 20;34(6):942-5. doi: 10.1364/AO.34.000942. PMID: 21037614.
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Impact of Walking and Running on the Heel bone: the Adventist Health Study-2.

Journal of scientific research and reports

Lousuebsakul-Matthews V, Thorpe D, Knutsen R, Beeson WL, Fraser GE, Knutsen SF.
PMID: 30740466
J Sci Res Rep. 2015;7(3):165-177. doi: 10.9734/JSRR/2015/17962. Epub 2015 Apr 30.

AIMS: Physical activity is well recognized for its bone health benefit. We examined the benefit of walk/run/jog on bone health using broadband ultrasound attenuation (BUA) of the calcaneus.METHODOLOGY: Caucasian and African American males (n=593) and females (n=1,106) had their...

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Lousuebsakul-Matthews V, Thorpe D, Knutsen R, et al. Impact of Walking and Running on the Heel bone: the Adventist Health Study-2. J Sci Res Rep. 2015;7(3):165-177doi: 10.9734/JSRR/2015/17962.
Lousuebsakul-Matthews, V., Thorpe, D., Knutsen, R., Beeson, W. L., Fraser, G. E., & Knutsen, S. F. (2015). Impact of Walking and Running on the Heel bone: the Adventist Health Study-2. Journal of scientific research and reports, 7(3), 165-177. https://doi.org/10.9734/JSRR/2015/17962
Lousuebsakul-Matthews, Vichuda, et al. "Impact of Walking and Running on the Heel bone: the Adventist Health Study-2." Journal of scientific research and reports vol. 7,3 (2015): 165-177. doi: https://doi.org/10.9734/JSRR/2015/17962
Lousuebsakul-Matthews V, Thorpe D, Knutsen R, Beeson WL, Fraser GE, Knutsen SF. Impact of Walking and Running on the Heel bone: the Adventist Health Study-2. J Sci Res Rep. 2015;7(3):165-177. doi: 10.9734/JSRR/2015/17962. Epub 2015 Apr 30. PMID: 30740466; PMCID: PMC6366637.
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From clear lakes to murky waters - tracing the functional response of high-latitude lake communities to concurrent 'greening' and 'browning'.

Ecology letters

Hayden B, Harrod C, Thomas SM, Eloranta AP, Myllykangas JP, Siwertsson A, Praebel K, Knudsen R, Amundsen PA, Kahilainen KK.
PMID: 30793453
Ecol Lett. 2019 May;22(5):807-816. doi: 10.1111/ele.13238. Epub 2019 Feb 21.

Climate change and the intensification of land use practices are causing widespread eutrophication of subarctic lakes. The implications of this rapid change for lake ecosystem function remain poorly understood. To assess how freshwater communities respond to such profound changes...

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Hayden B, Harrod C, Thomas SM, et al. From clear lakes to murky waters - tracing the functional response of high-latitude lake communities to concurrent 'greening' and 'browning'. Ecol Lett. 2019;22(5):807-816doi: 10.1111/ele.13238.
Hayden, B., Harrod, C., Thomas, S. M., Eloranta, A. P., Myllykangas, J. P., Siwertsson, A., Praebel, K., Knudsen, R., Amundsen, P. A., & Kahilainen, K. K. (2019). From clear lakes to murky waters - tracing the functional response of high-latitude lake communities to concurrent 'greening' and 'browning'. Ecology letters, 22(5), 807-816. https://doi.org/10.1111/ele.13238
Hayden, B, et al. "From clear lakes to murky waters - tracing the functional response of high-latitude lake communities to concurrent 'greening' and 'browning'." Ecology letters vol. 22,5 (2019): 807-816. doi: https://doi.org/10.1111/ele.13238
Hayden B, Harrod C, Thomas SM, Eloranta AP, Myllykangas JP, Siwertsson A, Praebel K, Knudsen R, Amundsen PA, Kahilainen KK. From clear lakes to murky waters - tracing the functional response of high-latitude lake communities to concurrent 'greening' and 'browning'. Ecol Lett. 2019 May;22(5):807-816. doi: 10.1111/ele.13238. Epub 2019 Feb 21. PMID: 30793453.
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High power laser pulses with voltage controlled durations of 400 - 1000 ps.

Optics express

Harth F, Ulm T, Lührmann M, Knappe R, Klehr A, Hoffmann T, Erbert G, L'huillier JA.
PMID: 22453379
Opt Express. 2012 Mar 26;20(7):7002-7. doi: 10.1364/OE.20.007002.

We report on the generation and amplification of pulses with pulse widths of 400 - 1000 ps at 1064 nm. For pulse generation an ultra-fast semiconductor modulator is used that modulates a cw-beam of a DFB diode laser. The...

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Harth F, Ulm T, Lührmann M, et al. High power laser pulses with voltage controlled durations of 400 - 1000 ps. Opt Express. 2012;20(7):7002-7doi: 10.1364/OE.20.007002.
Harth, F., Ulm, T., Lührmann, M., Knappe, R., Klehr, A., Hoffmann, T., Erbert, G., & L'huillier, J. A. (2012). High power laser pulses with voltage controlled durations of 400 - 1000 ps. Optics express, 20(7), 7002-7. https://doi.org/10.1364/OE.20.007002
Harth, F, et al. "High power laser pulses with voltage controlled durations of 400 - 1000 ps." Optics express vol. 20,7 (2012): 7002-7. doi: https://doi.org/10.1364/OE.20.007002
Harth F, Ulm T, Lührmann M, Knappe R, Klehr A, Hoffmann T, Erbert G, L'huillier JA. High power laser pulses with voltage controlled durations of 400 - 1000 ps. Opt Express. 2012 Mar 26;20(7):7002-7. doi: 10.1364/OE.20.007002. PMID: 22453379.
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Showing 1 to 12 of 86 entries