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Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses.

Frontiers in plant science

de Oliveira Dal'Molin CG, Orellana C, Gebbie L, Steen J, Hodson MP, Chrysanthopoulos P, Plan MR, McQualter R, Palfreyman RW, Nielsen LK.
PMID: 27559337
Front Plant Sci. 2016 Aug 10;7:1138. doi: 10.3389/fpls.2016.01138. eCollection 2016.

The urgent need for major gains in industrial crops productivity and in biofuel production from bioenergy grasses have reinforced attention on understanding C4 photosynthesis. Systems biology studies of C4 model plants may reveal important features of C4 metabolism. Here...

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de Oliveira Dal'Molin CG, Orellana C, Gebbie L, et al. Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses. Front Plant Sci. 2016;7:1138doi: 10.3389/fpls.2016.01138.
de Oliveira Dal'Molin, C. G., Orellana, C., Gebbie, L., Steen, J., Hodson, M. P., Chrysanthopoulos, P., Plan, M. R., McQualter, R., Palfreyman, R. W., & Nielsen, L. K. (2016). Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses. Frontiers in plant science, 71138. https://doi.org/10.3389/fpls.2016.01138
de Oliveira Dal'Molin, Cristiana G, et al. "Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses." Frontiers in plant science vol. 7 (2016): 1138. doi: https://doi.org/10.3389/fpls.2016.01138
de Oliveira Dal'Molin CG, Orellana C, Gebbie L, Steen J, Hodson MP, Chrysanthopoulos P, Plan MR, McQualter R, Palfreyman RW, Nielsen LK. Metabolic Reconstruction of Setaria italica: A Systems Biology Approach for Integrating Tissue-Specific Omics and Pathway Analysis of Bioenergy Grasses. Front Plant Sci. 2016 Aug 10;7:1138. doi: 10.3389/fpls.2016.01138. eCollection 2016. PMID: 27559337; PMCID: PMC4978736.
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Antibody-mediated depletion of CCR10+EphA3+ cells ameliorates fibrosis in IPF.

JCI insight

Hohmann MS, Habiel DM, Espindola MS, Huang G, Jones I, Narayanan R, Coelho AL, Oldham JM, Noth I, Ma SF, Kurkciyan A, McQualter JL, Carraro G, Stripp B, Chen P, Jiang D, Noble PW, Parks W, Woronicz J, Yarranton G, Murray LA, Hogaboam CM.
PMID: 33945505
JCI Insight. 2021 Jun 08;6(11). doi: 10.1172/jci.insight.141061.

Idiopathic pulmonary fibrosis (IPF) is characterized by aberrant repair that diminishes lung function via mechanisms that remain poorly understood. CC chemokine receptor (CCR10) and its ligand CCL28 were both elevated in IPF compared with normal donors. CCR10 was highly...

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Hohmann MS, Habiel DM, Espindola MS, et al. Antibody-mediated depletion of CCR10+EphA3+ cells ameliorates fibrosis in IPF. JCI Insight. 2021;6(11)doi: 10.1172/jci.insight.141061.
Hohmann, M. S., Habiel, D. M., Espindola, M. S., Huang, G., Jones, I., Narayanan, R., Coelho, A. L., Oldham, J. M., Noth, I., Ma, S. F., Kurkciyan, A., McQualter, J. L., Carraro, G., Stripp, B., Chen, P., Jiang, D., Noble, P. W., Parks, W., Woronicz, J., Yarranton, G., Murray, L. A., & Hogaboam, C. M. (2021). Antibody-mediated depletion of CCR10+EphA3+ cells ameliorates fibrosis in IPF. JCI insight, 6(11), . https://doi.org/10.1172/jci.insight.141061
Hohmann, Miriam S, et al. "Antibody-mediated depletion of CCR10+EphA3+ cells ameliorates fibrosis in IPF." JCI insight vol. 6,11 (2021). doi: https://doi.org/10.1172/jci.insight.141061
Hohmann MS, Habiel DM, Espindola MS, Huang G, Jones I, Narayanan R, Coelho AL, Oldham JM, Noth I, Ma SF, Kurkciyan A, McQualter JL, Carraro G, Stripp B, Chen P, Jiang D, Noble PW, Parks W, Woronicz J, Yarranton G, Murray LA, Hogaboam CM. Antibody-mediated depletion of CCR10+EphA3+ cells ameliorates fibrosis in IPF. JCI Insight. 2021 Jun 08;6(11). doi: 10.1172/jci.insight.141061. PMID: 33945505; PMCID: PMC8262321.
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Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging.

Biotechnology for biofuels

Lupoi JS, Smith-Moritz A, Singh S, McQualter R, Scheller HV, Simmons BA, Henry RJ.
PMID: 26199643
Biotechnol Biofuels. 2015 Jul 10;8:98. doi: 10.1186/s13068-015-0279-y. eCollection 2015.

BACKGROUND: Slow-degrading, fossil fuel-derived plastics can have deleterious effects on the environment, especially marine ecosystems. The production of bio-based, biodegradable plastics from or in plants can assist in supplanting those manufactured using fossil fuels. Polyhydroxybutyrate (PHB) is one such...

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Lupoi JS, Smith-Moritz A, Singh S, et al. Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging. Biotechnol Biofuels. 2015;8:98doi: 10.1186/s13068-015-0279-y.
Lupoi, J. S., Smith-Moritz, A., Singh, S., McQualter, R., Scheller, H. V., Simmons, B. A., & Henry, R. J. (2015). Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging. Biotechnology for biofuels, 898. https://doi.org/10.1186/s13068-015-0279-y
Lupoi, Jason S, et al. "Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging." Biotechnology for biofuels vol. 8 (2015): 98. doi: https://doi.org/10.1186/s13068-015-0279-y
Lupoi JS, Smith-Moritz A, Singh S, McQualter R, Scheller HV, Simmons BA, Henry RJ. Localization of polyhydroxybutyrate in sugarcane using Fourier-transform infrared microspectroscopy and multivariate imaging. Biotechnol Biofuels. 2015 Jul 10;8:98. doi: 10.1186/s13068-015-0279-y. eCollection 2015. PMID: 26199643; PMCID: PMC4508826.
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Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid.

Plant biotechnology journal

McQualter RB, Chong BF, Meyer K, Van Dyk DE, O'Shea MG, Walton NJ, Viitanen PV, Brumbley SM.
PMID: 17168897
Plant Biotechnol J. 2005 Jan;3(1):29-41. doi: 10.1111/j.1467-7652.2004.00095.x.

Sugarcane (Saccharum hybrids) was evaluated as a production platform for p-hydroxybenzoic acid using two different bacterial proteins (a chloroplast-targeted version of Escherichia coli chorismate pyruvate-lyase and 4-hydroxycinnamoyl-CoA hydratase/lyase from Pseudomonas fluorescens) that both provide a one-enzyme pathway from a...

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McQualter RB, Chong BF, Meyer K, et al. Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid. Plant Biotechnol J. 2005;3(1):29-41doi: 10.1111/j.1467-7652.2004.00095.x.
McQualter, R. B., Chong, B. F., Meyer, K., Van Dyk, D. E., O'Shea, M. G., Walton, N. J., Viitanen, P. V., & Brumbley, S. M. (2005). Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid. Plant biotechnology journal, 3(1), 29-41. https://doi.org/10.1111/j.1467-7652.2004.00095.x
McQualter, Richard B, et al. "Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid." Plant biotechnology journal vol. 3,1 (2005): 29-41. doi: https://doi.org/10.1111/j.1467-7652.2004.00095.x
McQualter RB, Chong BF, Meyer K, Van Dyk DE, O'Shea MG, Walton NJ, Viitanen PV, Brumbley SM. Initial evaluation of sugarcane as a production platform for p-hydroxybenzoic acid. Plant Biotechnol J. 2005 Jan;3(1):29-41. doi: 10.1111/j.1467-7652.2004.00095.x. PMID: 17168897.
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Showing 1 to 4 of 4 entries