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Showing 1 to 12 of 17 entries
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VARIATIONAL LEVEL-SET WITH GAUSSIAN SHAPE MODEL FOR CELL SEGMENTATION.

Proceedings. International Conference on Image Processing

Gelas A, Mosaliganti K, Gouaillard A, Souhait L, Noche R, Obholzer N, Megason SG.
PMID: 21738904
Proc Int Conf Image Proc. 2009;1089-1092. doi: 10.1109/ICIP.2009.5413463.

In analysis of microscopy based images, a major challenge lies in splitting apart cells that appear to overlap because they are too densely packed. This task is complicated by the physics of the image acquisition that causes large variations...

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Gelas A, Mosaliganti K, Gouaillard A, et al. VARIATIONAL LEVEL-SET WITH GAUSSIAN SHAPE MODEL FOR CELL SEGMENTATION. Proc Int Conf Image Proc. 2009;1089-1092doi: 10.1109/ICIP.2009.5413463.
Gelas, A., Mosaliganti, K., Gouaillard, A., Souhait, L., Noche, R., Obholzer, N., & Megason, S. G. (2009). VARIATIONAL LEVEL-SET WITH GAUSSIAN SHAPE MODEL FOR CELL SEGMENTATION. Proceedings. International Conference on Image Processing, 1089-1092. https://doi.org/10.1109/ICIP.2009.5413463
Gelas, A, et al. "VARIATIONAL LEVEL-SET WITH GAUSSIAN SHAPE MODEL FOR CELL SEGMENTATION." Proceedings. International Conference on Image Processing vol. (2009): 1089-1092. doi: https://doi.org/10.1109/ICIP.2009.5413463
Gelas A, Mosaliganti K, Gouaillard A, Souhait L, Noche R, Obholzer N, Megason SG. VARIATIONAL LEVEL-SET WITH GAUSSIAN SHAPE MODEL FOR CELL SEGMENTATION. Proc Int Conf Image Proc. 2009;1089-1092. doi: 10.1109/ICIP.2009.5413463. PMID: 21738904; PMCID: PMC3129814.
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An experimental search strategy retrieves more precise results than PubMed and Google for questions about medical interventions.

PeerJ

Badgett RG, Dylla DP, Megison SD, Harmon EG.
PMID: 25922798
PeerJ. 2015 Apr 23;3:e913. doi: 10.7717/peerj.913. eCollection 2015.

Objective. We compared the precision of a search strategy designed specifically to retrieve randomized controlled trials (RCTs) and systematic reviews of RCTs with search strategies designed for broader purposes. Methods. We designed an experimental search strategy that automatically revised...

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Badgett RG, Dylla DP, Megison SD, et al. An experimental search strategy retrieves more precise results than PubMed and Google for questions about medical interventions. PeerJ. 2015;3:e913doi: 10.7717/peerj.913.
Badgett, R. G., Dylla, D. P., Megison, S. D., & Harmon, E. G. (2015). An experimental search strategy retrieves more precise results than PubMed and Google for questions about medical interventions. PeerJ, 3e913. https://doi.org/10.7717/peerj.913
Badgett, Robert G, et al. "An experimental search strategy retrieves more precise results than PubMed and Google for questions about medical interventions." PeerJ vol. 3 (2015): e913. doi: https://doi.org/10.7717/peerj.913
Badgett RG, Dylla DP, Megison SD, Harmon EG. An experimental search strategy retrieves more precise results than PubMed and Google for questions about medical interventions. PeerJ. 2015 Apr 23;3:e913. doi: 10.7717/peerj.913. eCollection 2015. PMID: 25922798; PMCID: PMC4411517.
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Inguinal prolapse of a retroperitoneal lymphovascular malformation.

Urology case reports

Trivedi HM, Megison S, Peters CA.
PMID: 34381693
Urol Case Rep. 2021 Jul 24;39:101786. doi: 10.1016/j.eucr.2021.101786. eCollection 2021 Nov.

Abdominal lymphovascular malformations (ALMs) are rare cystic masses that can present with nonspecific symptoms. We present a case of a 7-month-old boy who, during an uncomplicated communicating hydrocele repair, was found to have an incidental large, prolapsed mesenteric abdominal...

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Trivedi HM, Megison S, Peters CA. Inguinal prolapse of a retroperitoneal lymphovascular malformation. Urol Case Rep. 2021;39:101786doi: 10.1016/j.eucr.2021.101786.
Trivedi, H. M., Megison, S., & Peters, C. A. (2021). Inguinal prolapse of a retroperitoneal lymphovascular malformation. Urology case reports, 39101786. https://doi.org/10.1016/j.eucr.2021.101786
Trivedi, Hersh M, et al. "Inguinal prolapse of a retroperitoneal lymphovascular malformation." Urology case reports vol. 39 (2021): 101786. doi: https://doi.org/10.1016/j.eucr.2021.101786
Trivedi HM, Megison S, Peters CA. Inguinal prolapse of a retroperitoneal lymphovascular malformation. Urol Case Rep. 2021 Jul 24;39:101786. doi: 10.1016/j.eucr.2021.101786. eCollection 2021 Nov. PMID: 34381693; PMCID: PMC8340136.
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Esophagus-Like Bronchus: A Noncommunicating Bronchopulmonary Foregut Malformation.

International journal of surgical pathology

Weon JL, Megison S, Timmons CF, Rakheja D.
PMID: 33709821
Int J Surg Pathol. 2021 Dec;29(8):847-849. doi: 10.1177/10668969211002255. Epub 2021 Mar 12.

We describe a previously unreported bronchopulmonary foregut malformation wherein a segment of a bronchus of the lower lobe of the left lung in a 4-year-old girl was entirely esophageal in structure. No communication was identified between the tracheobronchial tree...

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Weon JL, Megison S, Timmons CF, et al. Esophagus-Like Bronchus: A Noncommunicating Bronchopulmonary Foregut Malformation. Int J Surg Pathol. 2021;29(8):847-849doi: 10.1177/10668969211002255.
Weon, J. L., Megison, S., Timmons, C. F., & Rakheja, D. (2021). Esophagus-Like Bronchus: A Noncommunicating Bronchopulmonary Foregut Malformation. International journal of surgical pathology, 29(8), 847-849. https://doi.org/10.1177/10668969211002255
Weon, Jenny L, et al. "Esophagus-Like Bronchus: A Noncommunicating Bronchopulmonary Foregut Malformation." International journal of surgical pathology vol. 29,8 (2021): 847-849. doi: https://doi.org/10.1177/10668969211002255
Weon JL, Megison S, Timmons CF, Rakheja D. Esophagus-Like Bronchus: A Noncommunicating Bronchopulmonary Foregut Malformation. Int J Surg Pathol. 2021 Dec;29(8):847-849. doi: 10.1177/10668969211002255. Epub 2021 Mar 12. PMID: 33709821.
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FAK Inhibition Decreases Hepatoblastoma Survival Both In Vitro and In Vivo.

Translational oncology

Gillory LA, Stewart JE, Megison ML, Nabers HC, Mroczek-Musulman E, Beierle EA.
PMID: 23544173
Transl Oncol. 2013 Apr;6(2):206-15. doi: 10.1593/tlo.12505. Epub 2013 Apr 01.

Hepatoblastoma is the most frequently diagnosed liver tumor of childhood, and children with advanced, metastatic or relapsed disease have a disease-free survival rate under 50%. Focal adhesion kinase (FAK) is a nonreceptor tyrosine kinase that is important in many...

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Gillory LA, Stewart JE, Megison ML, et al. FAK Inhibition Decreases Hepatoblastoma Survival Both In Vitro and In Vivo. Transl Oncol. 2013;6(2):206-15doi: 10.1593/tlo.12505.
Gillory, L. A., Stewart, J. E., Megison, M. L., Nabers, H. C., Mroczek-Musulman, E., & Beierle, E. A. (2013). FAK Inhibition Decreases Hepatoblastoma Survival Both In Vitro and In Vivo. Translational oncology, 6(2), 206-15. https://doi.org/10.1593/tlo.12505
Gillory, Lauren A, et al. "FAK Inhibition Decreases Hepatoblastoma Survival Both In Vitro and In Vivo." Translational oncology vol. 6,2 (2013): 206-15. doi: https://doi.org/10.1593/tlo.12505
Gillory LA, Stewart JE, Megison ML, Nabers HC, Mroczek-Musulman E, Beierle EA. FAK Inhibition Decreases Hepatoblastoma Survival Both In Vitro and In Vivo. Transl Oncol. 2013 Apr;6(2):206-15. doi: 10.1593/tlo.12505. Epub 2013 Apr 01. PMID: 23544173; PMCID: PMC3610546.
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Durable Clinical Response to Larotrectinib in an Adolescent Patient With an Undifferentiated Sarcoma Harboring an .

JCO precision oncology

Wu LW, Pavlock T, Patterson A, Post A, Ambrose C, Rajaram V, Pavlick DC, Cooke M, Miller VA, Albacker LA, Ali SM, Smith S, Cox MC, Martin A, Megison S, Laetsch TW.
PMID: 32913990
JCO Precis Oncol. 2018 Aug 02;2. doi: 10.1200/PO.18.00101. eCollection 2018.

No abstract available.

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Wu LW, Pavlock T, Patterson A, et al. Durable Clinical Response to Larotrectinib in an Adolescent Patient With an Undifferentiated Sarcoma Harboring an . JCO Precis Oncol. 2018;2doi: 10.1200/PO.18.00101.
Wu, L. W., Pavlock, T., Patterson, A., Post, A., Ambrose, C., Rajaram, V., Pavlick, D. C., Cooke, M., Miller, V. A., Albacker, L. A., Ali, S. M., Smith, S., Cox, M. C., Martin, A., Megison, S., & Laetsch, T. W. (2018). Durable Clinical Response to Larotrectinib in an Adolescent Patient With an Undifferentiated Sarcoma Harboring an . JCO precision oncology, 2. https://doi.org/10.1200/PO.18.00101
Wu, Lawrence W, et al. "Durable Clinical Response to Larotrectinib in an Adolescent Patient With an Undifferentiated Sarcoma Harboring an ." JCO precision oncology vol. 2 (2018). doi: https://doi.org/10.1200/PO.18.00101
Wu LW, Pavlock T, Patterson A, Post A, Ambrose C, Rajaram V, Pavlick DC, Cooke M, Miller VA, Albacker LA, Ali SM, Smith S, Cox MC, Martin A, Megison S, Laetsch TW. Durable Clinical Response to Larotrectinib in an Adolescent Patient With an Undifferentiated Sarcoma Harboring an . JCO Precis Oncol. 2018 Aug 02;2. doi: 10.1200/PO.18.00101. eCollection 2018. PMID: 32913990; PMCID: PMC7446438.
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A novel deep learning-based 3D cell segmentation framework for future image-based disease detection.

Scientific reports

Wang A, Zhang Q, Han Y, Megason S, Hormoz S, Mosaliganti KR, Lam JCK, Li VOK.
PMID: 35013443
Sci Rep. 2022 Jan 10;12(1):342. doi: 10.1038/s41598-021-04048-3.

Cell segmentation plays a crucial role in understanding, diagnosing, and treating diseases. Despite the recent success of deep learning-based cell segmentation methods, it remains challenging to accurately segment densely packed cells in 3D cell membrane images. Existing approaches also...

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Wang A, Zhang Q, Han Y, et al. A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Sci Rep. 2022;12(1):342doi: 10.1038/s41598-021-04048-3.
Wang, A., Zhang, Q., Han, Y., Megason, S., Hormoz, S., Mosaliganti, K. R., Lam, J. C. K., & Li, V. O. K. (2022). A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Scientific reports, 12(1), 342. https://doi.org/10.1038/s41598-021-04048-3
Wang, Andong, et al. "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection." Scientific reports vol. 12,1 (2022): 342. doi: https://doi.org/10.1038/s41598-021-04048-3
Wang A, Zhang Q, Han Y, Megason S, Hormoz S, Mosaliganti KR, Lam JCK, Li VOK. A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Sci Rep. 2022 Jan 10;12(1):342. doi: 10.1038/s41598-021-04048-3. PMID: 35013443.
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A novel deep learning-based 3D cell segmentation framework for future image-based disease detection.

Scientific reports

Wang A, Zhang Q, Han Y, Megason S, Hormoz S, Mosaliganti KR, Lam JCK, Li VOK.
PMID: 35013443
Sci Rep. 2022 Jan 10;12(1):342. doi: 10.1038/s41598-021-04048-3.

Cell segmentation plays a crucial role in understanding, diagnosing, and treating diseases. Despite the recent success of deep learning-based cell segmentation methods, it remains challenging to accurately segment densely packed cells in 3D cell membrane images. Existing approaches also...

Cite
Wang A, Zhang Q, Han Y, et al. A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Sci Rep. 2022;12(1):342doi: 10.1038/s41598-021-04048-3.
Wang, A., Zhang, Q., Han, Y., Megason, S., Hormoz, S., Mosaliganti, K. R., Lam, J. C. K., & Li, V. O. K. (2022). A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Scientific reports, 12(1), 342. https://doi.org/10.1038/s41598-021-04048-3
Wang, Andong, et al. "A novel deep learning-based 3D cell segmentation framework for future image-based disease detection." Scientific reports vol. 12,1 (2022): 342. doi: https://doi.org/10.1038/s41598-021-04048-3
Wang A, Zhang Q, Han Y, Megason S, Hormoz S, Mosaliganti KR, Lam JCK, Li VOK. A novel deep learning-based 3D cell segmentation framework for future image-based disease detection. Sci Rep. 2022 Jan 10;12(1):342. doi: 10.1038/s41598-021-04048-3. PMID: 35013443; PMCID: PMC8748745.
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Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis.

Cell

Munjal A, Hannezo E, Tsai TY, Mitchison TJ, Megason SG.
PMID: 34942099
Cell. 2021 Dec 22;184(26):6313-6325.e18. doi: 10.1016/j.cell.2021.11.025.

How tissues acquire complex shapes is a fundamental question in biology and regenerative medicine. Zebrafish semicircular canals form from invaginations in the otic epithelium (buds) that extend and fuse to form the hubs of each canal. We find that...

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Munjal A, Hannezo E, Tsai TY, et al. Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell. 2021;184(26):6313-6325.e18doi: 10.1016/j.cell.2021.11.025.
Munjal, A., Hannezo, E., Tsai, T. Y., Mitchison, T. J., & Megason, S. G. (2021). Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell, 184(26), 6313-6325.e18. https://doi.org/10.1016/j.cell.2021.11.025
Munjal, Akankshi, et al. "Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis." Cell vol. 184,26 (2021): 6313-6325.e18. doi: https://doi.org/10.1016/j.cell.2021.11.025
Munjal A, Hannezo E, Tsai TY, Mitchison TJ, Megason SG. Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell. 2021 Dec 22;184(26):6313-6325.e18. doi: 10.1016/j.cell.2021.11.025. PMID: 34942099.
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Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis.

Cell

Munjal A, Hannezo E, Tsai TY, Mitchison TJ, Megason SG.
PMID: 34942099
Cell. 2021 Dec 22;184(26):6313-6325.e18. doi: 10.1016/j.cell.2021.11.025.

How tissues acquire complex shapes is a fundamental question in biology and regenerative medicine. Zebrafish semicircular canals form from invaginations in the otic epithelium (buds) that extend and fuse to form the hubs of each canal. We find that...

Cite
Munjal A, Hannezo E, Tsai TY, et al. Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell. 2021;184(26):6313-6325.e18doi: 10.1016/j.cell.2021.11.025.
Munjal, A., Hannezo, E., Tsai, T. Y., Mitchison, T. J., & Megason, S. G. (2021). Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell, 184(26), 6313-6325.e18. https://doi.org/10.1016/j.cell.2021.11.025
Munjal, Akankshi, et al. "Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis." Cell vol. 184,26 (2021): 6313-6325.e18. doi: https://doi.org/10.1016/j.cell.2021.11.025
Munjal A, Hannezo E, Tsai TY, Mitchison TJ, Megason SG. Extracellular hyaluronate pressure shaped by cellular tethers drives tissue morphogenesis. Cell. 2021 Dec 22;184(26):6313-6325.e18. doi: 10.1016/j.cell.2021.11.025. PMID: 34942099; PMCID: PMC8722442.
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Uni-traveling-carrier variable confinement waveguide photodiodes.

Optics express

Klamkin J, Madison SM, Oakley DC, Napoleone A, O'Donnell FJ, Sheehan M, Missaggia LJ, Caissie JM, Plant JJ, Juodawlkis PW.
PMID: 21643278
Opt Express. 2011 May 23;19(11):10199-205. doi: 10.1364/OE.19.010199.

Uni-traveling-carrier waveguide photodiodes (PDs) with a variable optical confinement mode size transformer are demonstrated. The optical mode is large at the input for minimal front-end saturation and the mode transforms as the light propagates so that the absorption profile...

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Klamkin J, Madison SM, Oakley DC, et al. Uni-traveling-carrier variable confinement waveguide photodiodes. Opt Express. 2011;19(11):10199-205doi: 10.1364/OE.19.010199.
Klamkin, J., Madison, S. M., Oakley, D. C., Napoleone, A., O'Donnell, F. J., Sheehan, M., Missaggia, L. J., Caissie, J. M., Plant, J. J., & Juodawlkis, P. W. (2011). Uni-traveling-carrier variable confinement waveguide photodiodes. Optics express, 19(11), 10199-205. https://doi.org/10.1364/OE.19.010199
Klamkin, Jonathan, et al. "Uni-traveling-carrier variable confinement waveguide photodiodes." Optics express vol. 19,11 (2011): 10199-205. doi: https://doi.org/10.1364/OE.19.010199
Klamkin J, Madison SM, Oakley DC, Napoleone A, O'Donnell FJ, Sheehan M, Missaggia LJ, Caissie JM, Plant JJ, Juodawlkis PW. Uni-traveling-carrier variable confinement waveguide photodiodes. Opt Express. 2011 May 23;19(11):10199-205. doi: 10.1364/OE.19.010199. PMID: 21643278.
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ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES.

Proceedings. IEEE International Symposium on Biomedical Imaging

Mosaliganti K, Janoos F, Gelas A, Noche R, Obholzer N, Machiraju R, Megason SG.
PMID: 21766060
Proc IEEE Int Symp Biomed Imaging. 2010;588-591. doi: 10.1109/ISBI.2010.5490110.

We propose an anisotropic diffusion method to denoise and aid the reconstruction of planar objects in three-dimensional images. The contribution of this paper is the development of a planarity function characterizing plate-like structures using an image Hessian's eigensystem. We...

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Mosaliganti K, Janoos F, Gelas A, et al. ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES. Proc IEEE Int Symp Biomed Imaging. 2010;588-591doi: 10.1109/ISBI.2010.5490110.
Mosaliganti, K., Janoos, F., Gelas, A., Noche, R., Obholzer, N., Machiraju, R., & Megason, S. G. (2010). ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES. Proceedings. IEEE International Symposium on Biomedical Imaging, 588-591. https://doi.org/10.1109/ISBI.2010.5490110
Mosaliganti, K, et al. "ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES." Proceedings. IEEE International Symposium on Biomedical Imaging vol. (2010): 588-591. doi: https://doi.org/10.1109/ISBI.2010.5490110
Mosaliganti K, Janoos F, Gelas A, Noche R, Obholzer N, Machiraju R, Megason SG. ANISOTROPIC PLATE DIFFUSION FILTERING FOR DETECTION OF CELL MEMBRANES IN 3D MICROSCOPY IMAGES. Proc IEEE Int Symp Biomed Imaging. 2010;588-591. doi: 10.1109/ISBI.2010.5490110. PMID: 21766060; PMCID: PMC3136121.
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Showing 1 to 12 of 17 entries