Advanced Search
Display options
Filter resources
Text Availability
Article type
Publication date
Species
Language
Sex
Age
Showing 1 to 12 of 2909 entries
Sorted by: Best Match Show Resources per page
Effect of method of deduplication on estimation of differential gene expression using RNA-seq.

PeerJ

Klepikova AV, Kasianov AS, Chesnokov MS, Lazarevich NL, Penin AA, Logacheva M.
PMID: 28321364
PeerJ. 2017 Mar 16;5:e3091. doi: 10.7717/peerj.3091. eCollection 2017.

BACKGROUND: RNA-seq is a useful tool for analysis of gene expression. However, its robustness is greatly affected by a number of artifacts. One of them is the presence of duplicated reads.RESULTS: To infer the influence of different methods of...

Cite
Klepikova AV, Kasianov AS, Chesnokov MS, et al. Effect of method of deduplication on estimation of differential gene expression using RNA-seq. PeerJ. 2017;5:e3091doi: 10.7717/peerj.3091.
Klepikova, A. V., Kasianov, A. S., Chesnokov, M. S., Lazarevich, N. L., Penin, A. A., & Logacheva, M. (2017). Effect of method of deduplication on estimation of differential gene expression using RNA-seq. PeerJ, 5e3091. https://doi.org/10.7717/peerj.3091
Klepikova, Anna V, et al. "Effect of method of deduplication on estimation of differential gene expression using RNA-seq." PeerJ vol. 5 (2017): e3091. doi: https://doi.org/10.7717/peerj.3091
Klepikova AV, Kasianov AS, Chesnokov MS, Lazarevich NL, Penin AA, Logacheva M. Effect of method of deduplication on estimation of differential gene expression using RNA-seq. PeerJ. 2017 Mar 16;5:e3091. doi: 10.7717/peerj.3091. eCollection 2017. PMID: 28321364; PMCID: PMC5357343.
Copy Download .nbib Format: NLM
A voltage-dependent fluorescent indicator for optogenetic applications, archaerhodopsin-3: Structure and optical properties from .

F1000Research

Nikolaev DM, Emelyanov A, Boitsov VM, Panov MS, Ryazantsev MN.
PMID: 28435665
F1000Res. 2017 Jan 11;6:33. doi: 10.12688/f1000research.10541.2. eCollection 2017.

It was demonstrated in recent studies that some rhodopsins can be used in optogenetics as fluorescent indicators of membrane voltage. One of the promising candidates for these applications is archaerhodopsin-3. However, the fluorescent signal for wild-type achaerhodopsin-3 is not...

Cite
Nikolaev DM, Emelyanov A, Boitsov VM, et al. A voltage-dependent fluorescent indicator for optogenetic applications, archaerhodopsin-3: Structure and optical properties from . F1000Res. 2017;6:33doi: 10.12688/f1000research.10541.2.
Nikolaev, D. M., Emelyanov, A., Boitsov, V. M., Panov, M. S., & Ryazantsev, M. N. (2017). A voltage-dependent fluorescent indicator for optogenetic applications, archaerhodopsin-3: Structure and optical properties from . F1000Research, 633. https://doi.org/10.12688/f1000research.10541.2
Nikolaev, Dmitrii M, et al. "A voltage-dependent fluorescent indicator for optogenetic applications, archaerhodopsin-3: Structure and optical properties from ." F1000Research vol. 6 (2017): 33. doi: https://doi.org/10.12688/f1000research.10541.2
Nikolaev DM, Emelyanov A, Boitsov VM, Panov MS, Ryazantsev MN. A voltage-dependent fluorescent indicator for optogenetic applications, archaerhodopsin-3: Structure and optical properties from . F1000Res. 2017 Jan 11;6:33. doi: 10.12688/f1000research.10541.2. eCollection 2017. PMID: 28435665; PMCID: PMC5381632.
Copy Download .nbib Format: NLM
Timing of Femoral Shaft Fracture Fixation Affects Length of Hospital Stay in Patients with Multiple Injuries.

The open orthopaedics journal

Morshed S, Mikhail C, Miclau Iii T.
PMID: 26312117
Open Orthop J. 2015 Jul 31;9:324-31. doi: 10.2174/1874325001509010324. eCollection 2015.

PURPOSE: Appropriate timing of definitive fracture care in the setting of polytrauma remains controversial. The aim of this study is to determine whether timing of definitive fixation of femur fractures impacts subsequent length of hospital stay, a surrogate for...

Cite
Morshed S, Mikhail C, Miclau Iii T. Timing of Femoral Shaft Fracture Fixation Affects Length of Hospital Stay in Patients with Multiple Injuries. Open Orthop J. 2015;9:324-31doi: 10.2174/1874325001509010324.
Morshed, S., Mikhail, C., & Miclau Iii, T. (2015). Timing of Femoral Shaft Fracture Fixation Affects Length of Hospital Stay in Patients with Multiple Injuries. The open orthopaedics journal, 9324-31. https://doi.org/10.2174/1874325001509010324
Morshed, Saam, et al. "Timing of Femoral Shaft Fracture Fixation Affects Length of Hospital Stay in Patients with Multiple Injuries." The open orthopaedics journal vol. 9 (2015): 324-31. doi: https://doi.org/10.2174/1874325001509010324
Morshed S, Mikhail C, Miclau Iii T. Timing of Femoral Shaft Fracture Fixation Affects Length of Hospital Stay in Patients with Multiple Injuries. Open Orthop J. 2015 Jul 31;9:324-31. doi: 10.2174/1874325001509010324. eCollection 2015. PMID: 26312117; PMCID: PMC4541315.
Copy Download .nbib Format: NLM
Proceedings of the 2015 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference.

BMC bioinformatics

Wren JD, Thakkar S, Homayouni R, Johann DJ, Dozmorov MG.
PMID: 26424691
BMC Bioinformatics. 2015;16:S1. doi: 10.1186/1471-2105-16-S13-S1. Epub 2015 Sep 25.

No abstract available.

Cite
Wren JD, Thakkar S, Homayouni R, et al. Proceedings of the 2015 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinformatics. 2015;16:S1doi: 10.1186/1471-2105-16-S13-S1.
Wren, J. D., Thakkar, S., Homayouni, R., Johann, D. J., & Dozmorov, M. G. (2015). Proceedings of the 2015 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC bioinformatics, 16S1. https://doi.org/10.1186/1471-2105-16-S13-S1
Wren, Jonathan D, et al. "Proceedings of the 2015 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference." BMC bioinformatics vol. 16 (2015): S1. doi: https://doi.org/10.1186/1471-2105-16-S13-S1
Wren JD, Thakkar S, Homayouni R, Johann DJ, Dozmorov MG. Proceedings of the 2015 MidSouth Computational Biology and Bioinformatics Society (MCBIOS) Conference. BMC Bioinformatics. 2015;16:S1. doi: 10.1186/1471-2105-16-S13-S1. Epub 2015 Sep 25. PMID: 26424691; PMCID: PMC4596983.
Copy Download .nbib Format: NLM
Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin.

Journal of the American Chemical Society

Cirera B, Trukhina O, Björk J, Bottari G, Rodríguez-Fernández J, Martin-Jimenez A, Islyaikin MK, Otero R, Gallego JM, Miranda R, Torres T, Ecija D.
PMID: 28889740
J Am Chem Soc. 2017 Oct 11;139(40):14129-14136. doi: 10.1021/jacs.7b06406. Epub 2017 Sep 27.

Expanded porphyrins are large-cavity macrocycles with enormous potential in coordination chemistry, anion sensing, photodynamic therapy, and optoelectronics. In the last two decades, the surface science community has assessed the physicochemical properties of tetrapyrrolic-like macrocycles. However, to date, the sublimation,...

Cite
Cirera B, Trukhina O, Björk J, et al. Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. J Am Chem Soc. 2017;139(40):14129-14136doi: 10.1021/jacs.7b06406.
Cirera, B., Trukhina, O., Björk, J., Bottari, G., Rodríguez-Fernández, J., Martin-Jimenez, A., Islyaikin, M. K., Otero, R., Gallego, J. M., Miranda, R., Torres, T., & Ecija, D. (2017). Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. Journal of the American Chemical Society, 139(40), 14129-14136. https://doi.org/10.1021/jacs.7b06406
Cirera, Borja, et al. "Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin." Journal of the American Chemical Society vol. 139,40 (2017): 14129-14136. doi: https://doi.org/10.1021/jacs.7b06406
Cirera B, Trukhina O, Björk J, Bottari G, Rodríguez-Fernández J, Martin-Jimenez A, Islyaikin MK, Otero R, Gallego JM, Miranda R, Torres T, Ecija D. Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. J Am Chem Soc. 2017 Oct 11;139(40):14129-14136. doi: 10.1021/jacs.7b06406. Epub 2017 Sep 27. PMID: 28889740.
Copy Download .nbib Format: NLM
Influence of structural and solvation factors on the spectral-fluorescent properties of alkyl-substituted BODIPYs in solutions.

Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy

Bumagina NA, Antina EV, Berezin MB, Kalyagin AA.
PMID: 27665190
Spectrochim Acta A Mol Biomol Spectrosc. 2017 Feb 15;173:228-234. doi: 10.1016/j.saa.2016.09.026. Epub 2016 Sep 20.

The spectral-fluorescent properties of alkyl-substituted BODIPYs 1-5 in organic solvents were investigated. The alkyl-substituted BODIPYs 1-5 exhibit intense chromophoric properties (lgε=4.60-5.00). Relative fluorescence quantum yield of studied compounds reaches 66-100% and weakly dependent on the structural and solvation effects....

Cite
Bumagina NA, Antina EV, Berezin MB, et al. Influence of structural and solvation factors on the spectral-fluorescent properties of alkyl-substituted BODIPYs in solutions. Spectrochim Acta A Mol Biomol Spectrosc. 2016;173:228-234doi: 10.1016/j.saa.2016.09.026.
Bumagina, N. A., Antina, E. V., Berezin, M. B., & Kalyagin, A. A. (2017). Influence of structural and solvation factors on the spectral-fluorescent properties of alkyl-substituted BODIPYs in solutions. Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy, 173228-234. https://doi.org/10.1016/j.saa.2016.09.026
Bumagina, Natalia A, et al. "Influence of structural and solvation factors on the spectral-fluorescent properties of alkyl-substituted BODIPYs in solutions." Spectrochimica acta. Part A, Molecular and biomolecular spectroscopy vol. 173 (2017): 228-234. doi: https://doi.org/10.1016/j.saa.2016.09.026
Bumagina NA, Antina EV, Berezin MB, Kalyagin AA. Influence of structural and solvation factors on the spectral-fluorescent properties of alkyl-substituted BODIPYs in solutions. Spectrochim Acta A Mol Biomol Spectrosc. 2017 Feb 15;173:228-234. doi: 10.1016/j.saa.2016.09.026. Epub 2016 Sep 20. PMID: 27665190.
Copy Download .nbib Format: NLM
'Crystal Genes' in Metallic Liquids and Glasses.

Scientific reports

Sun Y, Zhang F, Ye Z, Zhang Y, Fang X, Ding Z, Wang CZ, Mendelev MI, Ott RT, Kramer MJ, Ho KM.
PMID: 27030071
Sci Rep. 2016 Mar 31;6:23734. doi: 10.1038/srep23734.

We analyze the underlying structural order that transcends liquid, glass and crystalline states in metallic systems. A genetic algorithm is applied to search for the most common energetically favorable packing motifs in crystalline structures. These motifs are in turn...

Cite
Sun Y, Zhang F, Ye Z, et al. 'Crystal Genes' in Metallic Liquids and Glasses. Sci Rep. 2016;6:23734doi: 10.1038/srep23734.
Sun, Y., Zhang, F., Ye, Z., Zhang, Y., Fang, X., Ding, Z., Wang, C. Z., Mendelev, M. I., Ott, R. T., Kramer, M. J., & Ho, K. M. (2016). 'Crystal Genes' in Metallic Liquids and Glasses. Scientific reports, 623734. https://doi.org/10.1038/srep23734
Sun, Yang, et al. "'Crystal Genes' in Metallic Liquids and Glasses." Scientific reports vol. 6 (2016): 23734. doi: https://doi.org/10.1038/srep23734
Sun Y, Zhang F, Ye Z, Zhang Y, Fang X, Ding Z, Wang CZ, Mendelev MI, Ott RT, Kramer MJ, Ho KM. 'Crystal Genes' in Metallic Liquids and Glasses. Sci Rep. 2016 Mar 31;6:23734. doi: 10.1038/srep23734. PMID: 27030071; PMCID: PMC4814814.
Copy Download .nbib Format: NLM
Multilayered intercalation of 1-octanol into Brodie graphite oxide.

Nanoscale

Klechikov A, Sun J, Baburin IA, Seifert G, Rebrikova AT, Avramenko NV, Korobov MV, Talyzin AV.
PMID: 28509924
Nanoscale. 2017 May 25;9(20):6929-6936. doi: 10.1039/c7nr01792h.

Multilayered intercalation of 1-octanol into the structure of Brodie graphite oxide (B-GO) was studied as a function of temperature and pressure. Reversible phase transition with the addition/removal of one layer of 1-octanol was found at 265 K by means...

Cite
Klechikov A, Sun J, Baburin IA, et al. Multilayered intercalation of 1-octanol into Brodie graphite oxide. Nanoscale. 2017;9(20):6929-6936doi: 10.1039/c7nr01792h.
Klechikov, A., Sun, J., Baburin, I. A., Seifert, G., Rebrikova, A. T., Avramenko, N. V., Korobov, M. V., & Talyzin, A. V. (2017). Multilayered intercalation of 1-octanol into Brodie graphite oxide. Nanoscale, 9(20), 6929-6936. https://doi.org/10.1039/c7nr01792h
Klechikov, Alexey, et al. "Multilayered intercalation of 1-octanol into Brodie graphite oxide." Nanoscale vol. 9,20 (2017): 6929-6936. doi: https://doi.org/10.1039/c7nr01792h
Klechikov A, Sun J, Baburin IA, Seifert G, Rebrikova AT, Avramenko NV, Korobov MV, Talyzin AV. Multilayered intercalation of 1-octanol into Brodie graphite oxide. Nanoscale. 2017 May 25;9(20):6929-6936. doi: 10.1039/c7nr01792h. PMID: 28509924.
Copy Download .nbib Format: NLM
"Isolated" DyO.

Angewandte Chemie (International ed. in English)

Kazin PE, Zykin MA, Utochnikova VV, Magdysyuk OV, Vasiliev AV, Zubavichus YV, Schnelle W, Felser C, Jansen M.
PMID: 28862784
Angew Chem Int Ed Engl. 2017 Oct 16;56(43):13416-13420. doi: 10.1002/anie.201706391. Epub 2017 Sep 18.

Meeting the challenges of Moore's Law, predicting ambitious miniaturization rates of integrated circuits, requires to go beyond the traditional top-down approaches, and to employ synthetic chemistry methods, to use bottom-up techniques. During the recent decades, it has been shown...

Cite
Kazin PE, Zykin MA, Utochnikova VV, et al. "Isolated" DyO. Angew Chem Int Ed Engl. 2017;56(43):13416-13420doi: 10.1002/anie.201706391.
Kazin, P. E., Zykin, M. A., Utochnikova, V. V., Magdysyuk, O. V., Vasiliev, A. V., Zubavichus, Y. V., Schnelle, W., Felser, C., & Jansen, M. (2017). "Isolated" DyO. Angewandte Chemie (International ed. in English), 56(43), 13416-13420. https://doi.org/10.1002/anie.201706391
Kazin, Pavel E, et al. ""Isolated" DyO." Angewandte Chemie (International ed. in English) vol. 56,43 (2017): 13416-13420. doi: https://doi.org/10.1002/anie.201706391
Kazin PE, Zykin MA, Utochnikova VV, Magdysyuk OV, Vasiliev AV, Zubavichus YV, Schnelle W, Felser C, Jansen M. "Isolated" DyO. Angew Chem Int Ed Engl. 2017 Oct 16;56(43):13416-13420. doi: 10.1002/anie.201706391. Epub 2017 Sep 18. PMID: 28862784.
Copy Download .nbib Format: NLM
Ring lithiation of 1,8-bis(dimethylamino)naphthalene: another side of the 'proton sponge coin'.

Dalton transactions (Cambridge, England : 2003)

Antonov AS, Pozharskii AF, Ozeryanskii VA, Filarowski A, Suponitsky KY, Tolstoy PM, Vovk MA.
PMID: 26399216
Dalton Trans. 2015 Oct 28;44(40):17756-66. doi: 10.1039/c5dt02482j. Epub 2015 Sep 23.

It has been found that 1,8-bis(dimethylamino)naphthalene (DMAN), unlike N,N-dimethylaniline, undergoes ring metallation in the n-BuLi-TMEDA-Et2O system with a low selectivity and in poor total yields. The situation is significantly improved in the t-BuLi-TMEDA-n-hexane system when 3- and 4-lithium derivatives...

Cite
Antonov AS, Pozharskii AF, Ozeryanskii VA, et al. Ring lithiation of 1,8-bis(dimethylamino)naphthalene: another side of the 'proton sponge coin'. Dalton Trans. 2015;44(40):17756-66doi: 10.1039/c5dt02482j.
Antonov, A. S., Pozharskii, A. F., Ozeryanskii, V. A., Filarowski, A., Suponitsky, K. Y., Tolstoy, P. M., & Vovk, M. A. (2015). Ring lithiation of 1,8-bis(dimethylamino)naphthalene: another side of the 'proton sponge coin'. Dalton transactions (Cambridge, England : 2003), 44(40), 17756-66. https://doi.org/10.1039/c5dt02482j
Antonov, Alexander S, et al. "Ring lithiation of 1,8-bis(dimethylamino)naphthalene: another side of the 'proton sponge coin'." Dalton transactions (Cambridge, England : 2003) vol. 44,40 (2015): 17756-66. doi: https://doi.org/10.1039/c5dt02482j
Antonov AS, Pozharskii AF, Ozeryanskii VA, Filarowski A, Suponitsky KY, Tolstoy PM, Vovk MA. Ring lithiation of 1,8-bis(dimethylamino)naphthalene: another side of the 'proton sponge coin'. Dalton Trans. 2015 Oct 28;44(40):17756-66. doi: 10.1039/c5dt02482j. Epub 2015 Sep 23. PMID: 26399216.
Copy Download .nbib Format: NLM
Isomorphous rare-earth bis[bis(2,6-diisopropylphenyl)phosphate] complexes and their self-assembly into two-dimensional frameworks by intramolecular hydrogen bonds.

Acta crystallographica. Section C, Structural chemistry

Minyaev ME, Nifant'ev IE, Tavtorkin AN, Korchagina SA, Zeynalova SS, Ananyev IV, Churakov AV.
PMID: 28978790
Acta Crystallogr C Struct Chem. 2017 Oct 01;73:820-827. doi: 10.1107/S2053229617012979. Epub 2017 Sep 29.

The crystal structures of rare-earth diaryl- or dialkylphosphate derivatives are poorly explored. Crystals of bis[bis(2,6-diisopropylphenyl)phosphato-κO]chloridotetrakis(methanol-κO)neodymium methanol disolvate, [Nd(C

Cite
Minyaev ME, Nifant'ev IE, Tavtorkin AN, et al. Isomorphous rare-earth bis[bis(2,6-diisopropylphenyl)phosphate] complexes and their self-assembly into two-dimensional frameworks by intramolecular hydrogen bonds. Acta Crystallogr C Struct Chem. 2017;73:820-827doi: 10.1107/S2053229617012979.
Minyaev, M. E., Nifant'ev, I. E., Tavtorkin, A. N., Korchagina, S. A., Zeynalova, S. S., Ananyev, I. V., & Churakov, A. V. (2017). Isomorphous rare-earth bis[bis(2,6-diisopropylphenyl)phosphate] complexes and their self-assembly into two-dimensional frameworks by intramolecular hydrogen bonds. Acta crystallographica. Section C, Structural chemistry, 73820-827. https://doi.org/10.1107/S2053229617012979
Minyaev, Mikhail E, et al. "Isomorphous rare-earth bis[bis(2,6-diisopropylphenyl)phosphate] complexes and their self-assembly into two-dimensional frameworks by intramolecular hydrogen bonds." Acta crystallographica. Section C, Structural chemistry vol. 73 (2017): 820-827. doi: https://doi.org/10.1107/S2053229617012979
Minyaev ME, Nifant'ev IE, Tavtorkin AN, Korchagina SA, Zeynalova SS, Ananyev IV, Churakov AV. Isomorphous rare-earth bis[bis(2,6-diisopropylphenyl)phosphate] complexes and their self-assembly into two-dimensional frameworks by intramolecular hydrogen bonds. Acta Crystallogr C Struct Chem. 2017 Oct 01;73:820-827. doi: 10.1107/S2053229617012979. Epub 2017 Sep 29. PMID: 28978790.
Copy Download .nbib Format: NLM
Neurofeedback Therapy for Enhancing Visual Attention: State-of-the-Art and Challenges.

Frontiers in neuroscience

Ordikhani-Seyedlar M, Lebedev MA, Sorensen HB, Puthusserypady S.
PMID: 27536212
Front Neurosci. 2016 Aug 03;10:352. doi: 10.3389/fnins.2016.00352. eCollection 2016.

We have witnessed a rapid development of brain-computer interfaces (BCIs) linking the brain to external devices. BCIs can be utilized to treat neurological conditions and even to augment brain functions. BCIs offer a promising treatment for mental disorders, including...

Cite
Ordikhani-Seyedlar M, Lebedev MA, Sorensen HB, et al. Neurofeedback Therapy for Enhancing Visual Attention: State-of-the-Art and Challenges. Front Neurosci. 2016;10:352doi: 10.3389/fnins.2016.00352.
Ordikhani-Seyedlar, M., Lebedev, M. A., Sorensen, H. B., & Puthusserypady, S. (2016). Neurofeedback Therapy for Enhancing Visual Attention: State-of-the-Art and Challenges. Frontiers in neuroscience, 10352. https://doi.org/10.3389/fnins.2016.00352
Ordikhani-Seyedlar, Mehdi, et al. "Neurofeedback Therapy for Enhancing Visual Attention: State-of-the-Art and Challenges." Frontiers in neuroscience vol. 10 (2016): 352. doi: https://doi.org/10.3389/fnins.2016.00352
Ordikhani-Seyedlar M, Lebedev MA, Sorensen HB, Puthusserypady S. Neurofeedback Therapy for Enhancing Visual Attention: State-of-the-Art and Challenges. Front Neurosci. 2016 Aug 03;10:352. doi: 10.3389/fnins.2016.00352. eCollection 2016. PMID: 27536212; PMCID: PMC4971093.
Copy Download .nbib Format: NLM
Showing 1 to 12 of 2909 entries