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Showing 1 to 12 of 173 entries
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Analysis of primary microRNA loci from nascent transcriptomes reveals regulatory domains governed by chromatin architecture.

Nucleic acids research

Bouvy-Liivrand M, Hernández de Sande A, Pölönen P, Mehtonen J, Vuorenmaa T, Niskanen H, Sinkkonen L, Kaikkonen MU, Heinäniemi M.
PMID: 29036333
Nucleic Acids Res. 2017 Nov 16;45(20):12054. doi: 10.1093/nar/gkx909.

No abstract available.

Influence of TMAO and urea on the structure of water studied by inelastic X-ray scattering.

Physical chemistry chemical physics : PCCP

Sahle CJ, Schroer MA, Juurinen I, Niskanen J.
PMID: 27270889
Phys Chem Chem Phys. 2016 Jun 28;18(24):16518-26. doi: 10.1039/c6cp01922f. Epub 2016 Jun 07.

We present a study on the influence of the naturally occurring organic osmolytes tri-methylamine N-oxide (TMAO) and urea on the bulk structure of water using X-ray Raman scattering spectroscopy. Addition of TMAO is known to stabilize proteins in otherwise...

Biological and clinical significance of tryptophan-catabolizing enzymes in cutaneous T-cell lymphomas.

Oncoimmunology

Maliniemi P, Laukkanen K, Väkevä L, Dettmer K, Lipsanen T, Jeskanen L, Bessede A, Oefner PJ, Kadin ME, Ranki A.
PMID: 28405495
Oncoimmunology. 2017 Feb 10;6(3):e1273310. doi: 10.1080/2162402X.2016.1273310. eCollection 2017.

Indoleamine 2,3-deoxygenase 1 (IDO1) induces immune tolerance in the tumor microenvironment (TME) and is recognized as a potential therapeutic target. We studied the expression of both IDO1 and the related tryptophan 2,3-dioxygenase (TDO) in several different subtypes of cutaneous...

Identification of the dye adsorption modes in dye-sensitised solar cells with X-ray spectroscopy techniques: a computational study.

Physical chemistry chemical physics : PCCP

Akbari A, Hashemi J, Niskanen J, Huotari S, Hakala M.
PMID: 25820573
Phys Chem Chem Phys. 2015 Apr 28;17(16):10849-55. doi: 10.1039/c4cp05980h.

Adsorption geometry of dye molecules can have a substantial impact on the efficiency and functional lifespan of a dye-sensitised solar cell (DSSC) and therefore, its reliable assessment is an important step in engineering more efficient DSSCs. X-ray photoelectron spectroscopy...

Measurement of the midrapidity transverse energy distribution from square root of [(s)NN] = 130 GeV Au + Au collisions at RHIC.

Physical review letters

Adcox K, Adler SS, Ajitanand NN, Akiba Y, Alexander J, Aphecetche L, Arai Y, Aronson SH, Averbeck R, Awes TC, Barish KN, Barnes PD, Barrette J, Bassalleck B, Bathe S, Baublis V, Bazilevsky A, Belikov S, Bellaiche FG, Belyaev ST, Bennett MJ, Berdnikov Y, Botelho S, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy J, Butsyk S, Carey TA, Chand P, Chang J, Chang WC, Chavez LL, Chernichenko S, Chi CY, Chiba J, Chiu M, Choudhury RK, Christ T, Chujo T, Chung MS, Chung P, Cianciolo V, Cole BA, D'Enterria DG, David G, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Dietzsch O, Dinesh BV, Drees A, Durum A, Dutta D, Ebisu K, Efremenko YV, El Chenawi K, En'yo H, Esumi S, Ewell L, Ferdousi T, Fields DE, Fokin SL, Fraenkel Z, Franz A, Frawley AD, Fung SY, Garpman S, Ghosh TK, Glenn A, Godoi AL, Goto Y, Greene SV, Grosse Perdekamp M, Gupta SK, Guryn W, Gustafsson HA, Haggerty JS, Hamagaki H, Hansen AG, Hara H, Hartouni EP, Hayano R, Hayashi N, He X, Hemmick TK, Heuser JM, Hibino M, Hill JC, Ho DS, Homma K, Hong B, Hoover A, Ichihara T, Imai K, Ippolitov MS, Ishihara M, Jacak BV, Jang WY, Jia J, Johnson BM, Johnson SC, Joo KS, Kametani S, Kang JH, Kann M, Kapoor SS, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim HJ, Kim SY, Kim YG, Kinnison WW, Kistenev E, Kiyomichi A, Klein-Boesing C, Klinksiek S, Kochenda L, Kochetkov D, Kochetkov V, Koehler D, Kohama T, Kozlov A, Kroon PJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Lauret J, Lebedev A, Lee DM, Leitch MJ, Li XH, Li Z, Lim DJ, Liu MX, Liu X, Liu Z, Maguire CF, Mahon J, Makdisi YI, Manko VI, Mao Y, Mark SK, Markacs S, Martinez G, Marx MD, Masaike A, Matathias F, Matsumoto T, McGaughey PL, Melnikov E, Merschmeyer M, Messer F, Messer M, Miake Y, Miller TE, Milov A, Mioduszewski S, Mischke RE, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mühlbacher F, Muniruzzaman M, Murata J, Nagamiya S, Nagasaka Y, Nagle JL, Nakada Y, Nandi BK, Newby J, Nikkinen L, Nilsson P, Nishimura S, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Ono M, Onuchin V, Oskarsson A, Osterman L, Otterlund I, Oyama K, Paffrath L, Palounek AP, Pantuev VS, Papavassiliou V, Pate SF, Peitzmann T, Petridis AN, Pinkenburg C, Pisani RP, Pitukhin P, Plasil F, Pollack M, Pope K, Purschke ML, Ravinovich I, Read KF, Reygers K, Riabov V, Riabov Y, Rosati M, Rose AA, Ryu SS, Saito N, Sakaguchi A, Sakaguchi T, Sako H, Sakuma T, Samsonov V, Sangster TC, Santo R, Sato HD, Sato S, Sawada S, Schlei BR, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shiina T, Shin YH, Sibiriak IG, Silvermyr D, Sim KS, Simon-Gillo J, Singh CP, Singh V, Sivertz M, Soldatov A, Soltz RA, Sorensen S, Stankus PW, Starinsky N, Steinberg P, Stenlund E, Ster A, Stoll SP, Sugioka M, Sugitate T, Sullivan JP, Sumi Y, Sun Z, Suzuki M, Takagui EM, Taketani A, Tamai M, Tanaka KH, Tanaka Y, Taniguchi E, Tannenbaum MJ, Thomas J, Thomas JH, Thomas TL, Tian W, Tojo J, Torii H, Towell RS, Tserruya I, Tsuruoka H, Tsvetkov AA, Tuli SK, Tydesjö H, Tyurin N, Ushiroda T, van Hecke HW, Velissaris C, Velkovska J, Velkovsky M, Vinogradov AA, Volkov MA, Vorobyov A, Vznuzdaev E, Wang H, Watanabe Y, White SN, Witzig C, Wohn FK, Woody CL, Xie W, Yagi K, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang Z, Zhou S.
PMID: 11497762
Phys Rev Lett. 2001 Jul 30;87(5):052301. doi: 10.1103/PhysRevLett.87.052301. Epub 2001 Jul 17.

The first measurement of energy produced transverse to the beam direction at the Relativistic Heavy-Ion Collider at Brookhaven National Laboratory is presented. The midrapidity transverse energy density per participating nucleon rises steadily with the number of participants, closely paralleling...

Centrality dependence of pi(+/-), K(+/-), p, and (-)p production from sqrt[s(NN)] = 130 GeV Au + Au collisions at RHIC.

Physical review letters

Adcox K, Adler SS, Ajitanand NN, Akiba Y, Alexander J, Aphecetche L, Arai Y, Aronson SH, Averbeck R, Awes TC, Barish KN, Barnes PD, Barrette J, Bassalleck B, Bathe S, Baublis V, Bazilevsky A, Belikov S, Bellaiche FG, Belyaev ST, Bennett MJ, Berdnikov Y, Botelho S, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy J, Butsyk S, Carey TA, Chand P, Chang J, Chang WC, Chavez LL, Chernichenko S, Chi CY, Chiba J, Chiu M, Choudhury RK, Christ T, Chujo T, Chung MS, Chung P, Cianciolo V, Cole BA, D'Enterria DG, David G, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Dietzsch O, Dinesh BV, Drees A, Durum A, Dutta D, Ebisu K, Efremenko YV, El Chenawi K, En'yo H, Esumi S, Ewell L, Ferdousi T, Fields DE, Fokin SL, Fraenkel Z, Franz A, Frawley AD, Fung SY, Garpman S, Ghosh TK, Glenn A, Godoi AL, Goto Y, Greene SV, Grosse Perdekamp M, Gupta SK, Guryn W, Gustafsson HA, Haggerty JS, Hamagaki H, Hansen AG, Hara H, Hartouni EP, Hayano R, Hayashi N, He X, Hemmick TK, Heuser JM, Hibino M, Hill JC, Ho DS, Homma K, Hong B, Hoover A, Ichihara T, Imai K, Ippolitov MS, Ishihara M, Jacak BV, Jang WY, Jia J, Johnson BM, Johnson SC, Joo KS, Kametani S, Kang JH, Kann M, Kapoor SS, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim HJ, Kim SY, Kim YG, Kinnison WW, Kistenev E, Kiyomichi A, Klein-Boesing C, Klinksiek S, Kochenda L, Kochetkov V, Koehler D, Kohama T, Kotchetkov D, Kozlov A, Kroon PJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Lauret J, Lebedev A, Lee DM, Leitch MJ, Li XH, Li Z, Lim DJ, Liu MX, Liu X, Liu Z, Maguire CF, Mahon J, Makdisi YI, Manko VI, Mao Y, Mark SK, Markacs S, Martinez G, Marx MD, Masaike A, Matathias F, Matsumoto T, McGaughey PL, Melnikov E, Merschmeyer M, Messer F, Messer M, Miake Y, Miller TE, Milov A, Mioduszewski S, Mischke RE, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mühlbacher F, Muniruzzaman M, Murata J, Nagamiya S, Nagasaka Y, Nagle JL, Nakada Y, Nandi BK, Newby J, Nikkinen L, Nilsson P, Nishimura S, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Ono M, Onuchin V, Oskarsson A, Osterman L, Otterlund I, Oyama K, Paffrath L, Palounek AP, Pantuev VS, Papavassiliou V, Pate SF, Peitzmann T, Petridis AN, Pinkenburg C, Pisani RP, Pitukhin P, Plasil F, Pollack M, Pope K, Purschke ML, Ravinovich I, Read KF, Reygers K, Riabov V, Riabov Y, Rosati M, Rose AA, Ryu SS, Saito N, Sakaguchi A, Sakaguchi T, Sako H, Sakuma T, Samsonov V, Sangster TC, Santo R, Sato HD, Sato S, Sawada S, Schlei BR, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shiina T, Shin YH, Sibiriak IG, Silvermyr D, Sim KS, Simon-Gillo J, Singh CP, Singh V, Sivertz M, Soldatov A, Soltz RA, Sorensen S, Stankus PW, Starinsky N, Steinberg P, Stenlund E, Ster A, Stoll SP, Sugioka M, Sugitate T, Sullivan JP, Sumi Y, Sun Z, Suzuki M, Takagui EM, Taketani A, Tamai M, Tanaka KH, Tanaka Y, Taniguchi E, Tannenbaum MJ, Thomas J, Thomas JH, Thomas TL, Tian W, Tojo J, Torii H, Towell RS, Tserruya I, Tsuruoka H, Tsvetkov AA, Tuli SK, Tydesjö H, Tyurin N, Ushiroda T, van Hecke HW, Velissaris C, Velkovska J, Velkovsky M, Vinogradov AA, Volkov MA, Vorobyov A, Vznuzdaev E, Wang H, Watanabe Y, White SN, Witzig C, Wohn FK, Woody CL, Xie W, Yagi K, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang Z, Zhou S.
PMID: 12059292
Phys Rev Lett. 2002 Jun 17;88(24):242301. doi: 10.1103/PhysRevLett.88.242301. Epub 2002 May 28.

Identified pi(+/-), K(+/-), p, and (-)p transverse momentum spectra at midrapidity in sqrt[s(NN)] = 130 GeV Au+Au collisions were measured by the PHENIX experiment at RHIC as a function of collision centrality. Average transverse momenta increase with the number...

Pollen competition and seed-siring success in Picea abies.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Aronen T, Nikkanen T, Harju A, Tiimonen H, Häggman H.
PMID: 12582668
Theor Appl Genet. 2002 Mar;104(4):638-642. doi: 10.1007/s00122-001-0789-9.

The aim of the present work was to study pollen-tube competition in Picea abies. Controlled crossings were performed with pollen mixtures including pairs of pollen lots with fast and slowly elongating pollen-tubes. Paternity analysis using isozyme markers was performed...

Measurement of Lambda and Lambda(macro) particles in Au+Au collisions at the square root of S(NN) = 130 GeV.

Physical review letters

Adcox K, Adler SS, Ajitanand NN, Akiba Y, Alexander J, Aphecetche L, Arai Y, Aronson SH, Averbeck R, Awes TC, Barish KN, Barnes PD, Barrette J, Bassalleck B, Bathe S, Baublis V, Bazilevsky A, Belikov S, Bellaiche FG, Belyaev ST, Bennett MJ, Berdnikov Y, Botelho S, Brooks ML, Brown DS, Bruner N, Bucher D, Buesching H, Bumazhnov V, Bunce G, Burward-Hoy J, Butsyk S, Carey TA, Chand P, Chang J, Chang WC, Chavez LL, Chernichenko S, Chi CY, Chiba J, Chiu M, Choudhury RK, Christ T, Chujo T, Chung MS, Chung P, Cianciolo V, Cole BA, D'Enterria DG, David G, Delagrange H, Denisov A, Deshpande A, Desmond EJ, Dietzsch O, Dinesh BV, Drees A, Durum A, Dutta D, Ebisu K, Efremenko YV, el-Chenawi K, En'yo H, Esumi S, Ewell L, Ferdousi T, Fields DE, Fokin SL, Fraenkel Z, Franz A, Frawley AD, Fung SY, Garpman S, Ghosh TK, Glenn A, Godoi AL, Goto Y, Greene SV, Grosse Perdekamp M, Gupta SK, Guryn W, Gustafsson HA, Haggerty JS, Hamagaki H, Hansen AG, Hara H, Hartouni EP, Hayano R, Hayashi N, He X, Hemmick TK, Heuser JM, Hibino M, Hill JC, Ho DS, Homma K, Hong B, Hoover A, Ichihara T, Imai K, Ippolitov MS, Ishihara M, Jacak BV, Jang WY, Jia J, Johnson BM, Johnson SC, Joo KS, Kametani S, Kang JH, Kann M, Kapoor SS, Kelly S, Khachaturov B, Khanzadeev A, Kikuchi J, Kim DJ, Kim HJ, Kim SY, Kim YG, Kinnison WW, Kistenev E, Kiyomichi A, Klein-Boesing C, Klinksiek S, Kochenda L, Kochetkov V, Koehler D, Kohama T, Kotchetkov D, Kozlov A, Kroon PJ, Kurita K, Kweon MJ, Kwon Y, Kyle GS, Lacey R, Lajoie JG, Lauret J, Lebedev A, Lee DM, Leitch MJ, Li XH, Li Z, Lim DJ, Liu MX, Liu X, Liu Z, Maguire CF, Mahon J, Makdisi YI, Manko VI, Mao Y, Mark SK, Markacs S, Martinez G, Marx MD, Masaike A, Matathias F, Matsumoto T, McGaughey PL, Melnikov E, Merschmeyer M, Messer F, Messer M, Miake Y, Miller TE, Milov A, Mioduszewski S, Mischke RE, Mishra GC, Mitchell JT, Mohanty AK, Morrison DP, Moss JM, Mühlbacher F, Mukhopadhyay D, Muniruzzaman M, Murata J, Nagamiya S, Nagasaka Y, Nagle JL, Nakada Y, Nandi BK, Newby J, Nikkinen L, Nilsson P, Nishimura S, Nyanin AS, Nystrand J, O'Brien E, Ogilvie CA, Ohnishi H, Ojha ID, Ono M, Onuchin V, Oskarsson A, Osterman L, Otterlund I, Oyama K, Paffrath L, Pal D, Palounek AP, Pantuev VS, Papavassiliou V, Pate SF, Peitzmann T, Petridis AN, Pinkenburg C, Pisani RP, Pitukhin P, Plasil F, Pollack M, Pope K, Purschke ML, Ravinovich I, Read KF, Reygers K, Riabov V, Riabov Y, Rosati M, Rose AA, Ryu SS, Saito N, Sakaguchi A, Sakaguchi T, Sako H, Sakuma T, Samsonov V, Sangster TC, Santo R, Sato HD, Sato S, Sawada S, Schlei BR, Schutz Y, Semenov V, Seto R, Shea TK, Shein I, Shibata TA, Shigaki K, Shiina T, Shin YH, Sibiriak IG, Silvermyr D, Sim KS, Simon-Gillo J, Singh CP, Singh V, Sivertz M, Soldatov A, Soltz RA, Sorensen S, Stankus PW, Starinsky N, Steinberg P, Stenlund E, Ster A, Stoll SP, Sugioka M, Sugitate T, Sullivan JP, Sumi Y, Sun Z, Suzuki M, Takagui EM, Taketani A, Tamai M, Tanaka KH, Tanaka Y, Taniguchi E, Tannenbaum MJ, Thomas J, Thomas JH, Thomas TL, Tian W, Tojo J, Torii H, Towell RS, Tserruya I, Tsuruoka H, Tsvetkov AA, Tuli SK, Tydesjö H, Tyurin N, Ushiroda T, Van Hecke HW, Velissaris C, Velkovska J, Velkovsky M, Vinogradov AA, Volkov MA, Vorobyov A, Vznuzdaev E, Wang H, Watanabe Y, White SN, Witzig C, Wohn FK, Woody CL, Xie W, Yagi K, Yokkaichi S, Young GR, Yushmanov IE, Zajc WA, Zhang Z, Zhou S, Zhou S.
PMID: 12190391
Phys Rev Lett. 2002 Aug 26;89(9):092302. doi: 10.1103/PhysRevLett.89.092302. Epub 2002 Aug 12.

We present results on the measurement of Lambda and Lambda(macro) production in Au+Au collisions at square root of (S (NN) = 130 GeV with the PHENIX detector at the Relativistic Heavy Ion Collider. The transverse momentum spectra were measured...

Assessment of Health Risks in Canteen Kitchens.

International journal of occupational safety and ergonomics : JOSE

Pekkarinen A, Anttonen H, Niskanen J.
PMID: 10602591
Int J Occup Saf Ergon. 1996 Jan;2(3):262-267. doi: 10.1080/10803548.1996.11076354.

The ergonomic, occupational hygiene, and safety factors in canteen kitchen work were examined using worksite surveys and a questionnaire. Pain in the shoulders was found to be associated with the raised position of the upper limbs caused by excessively...

Decoherence of flux qubits due to 1/f flux noise.

Physical review letters

Yoshihara F, Harrabi K, Niskanen AO, Nakamura Y, Tsai JS.
PMID: 17155426
Phys Rev Lett. 2006 Oct 20;97(16):167001. doi: 10.1103/PhysRevLett.97.167001. Epub 2006 Oct 17.

We have investigated decoherence in Josephson-junction flux qubits. Based on the measurements of decoherence at various bias conditions, we discriminate contributions of different noise sources. We present a Gaussian decay function extracted from the echo signal as evidence of...

Finnish care integrated?.

International journal of integrated care

Niskanen JJ.
PMID: 16896395
Int J Integr Care. 2002;2:e16. doi: 10.5334/ijic.57. Epub 2002 Jun 01.

The public Finnish social and health care system has been challenged by the economic crisis, administrative reforms and increased demands. Better integration as a solution includes many examples, which have been taken to use. The most important are the...

Measurement of refractive index of isotropic particles by incorporating a multifunction spectrophotometer and immersion liquid method.

Applied optics

Niskanen I, Räty J, Peiponen KE.
PMID: 17676156
Appl Opt. 2007 Aug 01;46(22):5404-7. doi: 10.1364/ao.46.005404.

We propose a sequence of transmission and reflection measurements that makes it possible to get a relatively accurate estimate for refractive index of optically isotropic powder materials. This method makes use of immersion liquids and a multifunction spectrophotometer, which...

Showing 1 to 12 of 173 entries