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Applying translational principles to data science curriculum development

science curriculum

Acker A.
GSID: nw1Mw1aYFW4J
L Lyon, E Mattern, A Acker… - iPres 2015 …, 2015 - d-scholarship.pitt.edu

… In this complex landscape, Information Schools (iSchools) are reviewing curriculum requirements … a curriculum mapping exercise, which has built on translational principles (ie “translating research into practice”) [1] and has recognized the distinctiveness of different data science …

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Lyon, L., Mattern, E., Acker, A., & Langmead, A. (2015). Applying translational principles to data science curriculum development. iPres 2015 Proceedings.
Lyon, Liz, et al. "Applying translational principles to data science curriculum development." iPres 2015 Proceedings (2015).
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Gravity-assisted drainage imaging in the assessment of pediatric hydronephrosis.

Canadian Urological Association journal = Journal de l'Association des urologues du Canada

Acker MR, Clark R, Anderson P.
PMID: 27217854
Can Urol Assoc J. 2016 Mar-Apr;10(3):96-100. doi: 10.5489/cuaj.3237.

INTRODUCTION: As early detection of hydronephrosis increases, we require better methods of distinguishing between pediatric patients who require pyeloplasty vs. those with transient obstruction. Gravity-assisted drainage (GAD) as part of a standardized diuretic renography protocol has been suggested as...

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Acker MR, Clark R, Anderson P. Gravity-assisted drainage imaging in the assessment of pediatric hydronephrosis. Can Urol Assoc J. 2016;10(3):96-100doi: 10.5489/cuaj.3237.
Acker, M. R., Clark, R., & Anderson, P. (2016). Gravity-assisted drainage imaging in the assessment of pediatric hydronephrosis. Canadian Urological Association journal = Journal de l'Association des urologues du Canada, 10(3), 96-100. https://doi.org/10.5489/cuaj.3237
Acker, Matthew R, et al. "Gravity-assisted drainage imaging in the assessment of pediatric hydronephrosis." Canadian Urological Association journal = Journal de l'Association des urologues du Canada vol. 10,3 (2016): 96-100. doi: https://doi.org/10.5489/cuaj.3237
Acker MR, Clark R, Anderson P. Gravity-assisted drainage imaging in the assessment of pediatric hydronephrosis. Can Urol Assoc J. 2016 Mar-Apr;10(3):96-100. doi: 10.5489/cuaj.3237. PMID: 27217854; PMCID: PMC4840009.
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Giant spin-torque diode sensitivity in the absence of bias magnetic field.

Nature communications

Fang B, Carpentieri M, Hao X, Jiang H, Katine JA, Krivorotov IN, Ocker B, Langer J, Wang KL, Zhang B, Azzerboni B, Amiri PK, Finocchio G, Zeng Z.
PMID: 27052973
Nat Commun. 2016 Apr 07;7:11259. doi: 10.1038/ncomms11259.

Microwave detectors based on the spin-torque diode effect are among the key emerging spintronic devices. By utilizing the spin of electrons in addition to charge, they have the potential to overcome the theoretical performance limits of their semiconductor (Schottky)...

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Fang B, Carpentieri M, Hao X, et al. Giant spin-torque diode sensitivity in the absence of bias magnetic field. Nat Commun. 2016;7:11259doi: 10.1038/ncomms11259.
Fang, B., Carpentieri, M., Hao, X., Jiang, H., Katine, J. A., Krivorotov, I. N., Ocker, B., Langer, J., Wang, K. L., Zhang, B., Azzerboni, B., Amiri, P. K., Finocchio, G., & Zeng, Z. (2016). Giant spin-torque diode sensitivity in the absence of bias magnetic field. Nature communications, 711259. https://doi.org/10.1038/ncomms11259
Fang, Bin, et al. "Giant spin-torque diode sensitivity in the absence of bias magnetic field." Nature communications vol. 7 (2016): 11259. doi: https://doi.org/10.1038/ncomms11259
Fang B, Carpentieri M, Hao X, Jiang H, Katine JA, Krivorotov IN, Ocker B, Langer J, Wang KL, Zhang B, Azzerboni B, Amiri PK, Finocchio G, Zeng Z. Giant spin-torque diode sensitivity in the absence of bias magnetic field. Nat Commun. 2016 Apr 07;7:11259. doi: 10.1038/ncomms11259. PMID: 27052973; PMCID: PMC4829691.
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Erratum to: DAPK plays an important role in panobinostat-induced autophagy and commits cells to apoptosis under autophagy deficient conditions.

Apoptosis : an international journal on programmed cell death

Gandesiri M, Chakilam S, Ivanovska J, Benderska N, Ocker M, Di Fazio P, Feoktistova M, Gali-Muhtasib H, Rave-Fränk M, Prante O, Christiansen H, Leverkus M, Hartmann A, Schneider-Stock R.
PMID: 26960313
Apoptosis. 2016 May;21(5):671-4. doi: 10.1007/s10495-016-1224-7.

No abstract available.

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Gandesiri M, Chakilam S, Ivanovska J, et al. Erratum to: DAPK plays an important role in panobinostat-induced autophagy and commits cells to apoptosis under autophagy deficient conditions. Apoptosis. 2016;21(5):671-4doi: 10.1007/s10495-016-1224-7.
Gandesiri, M., Chakilam, S., Ivanovska, J., Benderska, N., Ocker, M., Di Fazio, P., Feoktistova, M., Gali-Muhtasib, H., Rave-Fränk, M., Prante, O., Christiansen, H., Leverkus, M., Hartmann, A., & Schneider-Stock, R. (2016). Erratum to: DAPK plays an important role in panobinostat-induced autophagy and commits cells to apoptosis under autophagy deficient conditions. Apoptosis : an international journal on programmed cell death, 21(5), 671-4. https://doi.org/10.1007/s10495-016-1224-7
Gandesiri, Muktheshwar, et al. "Erratum to: DAPK plays an important role in panobinostat-induced autophagy and commits cells to apoptosis under autophagy deficient conditions." Apoptosis : an international journal on programmed cell death vol. 21,5 (2016): 671-4. doi: https://doi.org/10.1007/s10495-016-1224-7
Gandesiri M, Chakilam S, Ivanovska J, Benderska N, Ocker M, Di Fazio P, Feoktistova M, Gali-Muhtasib H, Rave-Fränk M, Prante O, Christiansen H, Leverkus M, Hartmann A, Schneider-Stock R. Erratum to: DAPK plays an important role in panobinostat-induced autophagy and commits cells to apoptosis under autophagy deficient conditions. Apoptosis. 2016 May;21(5):671-4. doi: 10.1007/s10495-016-1224-7. PMID: 26960313.
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Fibromyalgia syndrome: metabolic and autophagic processes in intermittent cold stress mice.

Pharmacology research & perspectives

Oezel L, Then H, Jung AL, Jabari S, Bonaterra GA, Wissniowski TT, Önel SF, Ocker M, Thieme K, Kinscherf R, Di Fazio P.
PMID: 27713820
Pharmacol Res Perspect. 2016 Sep 27;4(5):e00248. doi: 10.1002/prp2.248. eCollection 2016 Oct.

Fibromyalgia is characterized by widespread musculoskeletal pain, fatigue, and depression. The aim was to analyze potential mitochondrial dysfunction or autophagy in mice after exposure to intermittent cold stress (ICS). Muscle and liver specimens were obtained from 36 mice. Lactate...

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Oezel L, Then H, Jung AL, et al. Fibromyalgia syndrome: metabolic and autophagic processes in intermittent cold stress mice. Pharmacol Res Perspect. 2016;4(5):e00248doi: 10.1002/prp2.248.
Oezel, L., Then, H., Jung, A. L., Jabari, S., Bonaterra, G. A., Wissniowski, T. T., Önel, S. F., Ocker, M., Thieme, K., Kinscherf, R., & Di Fazio, P. (2016). Fibromyalgia syndrome: metabolic and autophagic processes in intermittent cold stress mice. Pharmacology research & perspectives, 4(5), e00248. https://doi.org/10.1002/prp2.248
Oezel, Lisa, et al. "Fibromyalgia syndrome: metabolic and autophagic processes in intermittent cold stress mice." Pharmacology research & perspectives vol. 4,5 (2016): e00248. doi: https://doi.org/10.1002/prp2.248
Oezel L, Then H, Jung AL, Jabari S, Bonaterra GA, Wissniowski TT, Önel SF, Ocker M, Thieme K, Kinscherf R, Di Fazio P. Fibromyalgia syndrome: metabolic and autophagic processes in intermittent cold stress mice. Pharmacol Res Perspect. 2016 Sep 27;4(5):e00248. doi: 10.1002/prp2.248. eCollection 2016 Oct. PMID: 27713820; PMCID: PMC5045934.
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One Year Experience of Pheburane(®) (Sodium Phenylbutyrate) Treatment in a Patient with Argininosuccinate Lyase Deficiency.

JIMD reports

Uçar SK, Ozbaran B, Altinok YA, Kose M, Canda E, Kagnici M, Coker M.
PMID: 25665834
JIMD Rep. 2015;19:31-3. doi: 10.1007/8904_2014_361. Epub 2015 Feb 10.

UNLABELLED: Argininosuccinate lyase deficiency (ASLD) is a urea cycle disorder (UCD) treated with dietary adjustment and nitrogen scavenging agents. "Pheburane(®)" is a new tasteless and odour-free formulation of sodium phenylbutyrate, indicated in the treatment of UCD.A male patient diagnosed...

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Uçar SK, Ozbaran B, Altinok YA, et al. One Year Experience of Pheburane(®) (Sodium Phenylbutyrate) Treatment in a Patient with Argininosuccinate Lyase Deficiency. JIMD Rep. 2015;19:31-3doi: 10.1007/8904_2014_361.
Uçar, S. K., Ozbaran, B., Altinok, Y. A., Kose, M., Canda, E., Kagnici, M., & Coker, M. (2015). One Year Experience of Pheburane(®) (Sodium Phenylbutyrate) Treatment in a Patient with Argininosuccinate Lyase Deficiency. JIMD reports, 1931-3. https://doi.org/10.1007/8904_2014_361
Uçar, Sema Kalkan, et al. "One Year Experience of Pheburane(®) (Sodium Phenylbutyrate) Treatment in a Patient with Argininosuccinate Lyase Deficiency." JIMD reports vol. 19 (2015): 31-3. doi: https://doi.org/10.1007/8904_2014_361
Uçar SK, Ozbaran B, Altinok YA, Kose M, Canda E, Kagnici M, Coker M. One Year Experience of Pheburane(®) (Sodium Phenylbutyrate) Treatment in a Patient with Argininosuccinate Lyase Deficiency. JIMD Rep. 2015;19:31-3. doi: 10.1007/8904_2014_361. Epub 2015 Feb 10. PMID: 25665834; PMCID: PMC4501229.
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Fragment kinetic energies and modes of fragment formation.

Physical review letters

Odeh T, Bassini R, Begemann-Blaich M, Fritz S, Gaff-Ejakov SJ, Gourio D, Gross C, Imme G, Iori I, Kleinevoss U, Kunde GJ, Kunze WD, Lynen U, Maddalena V, Mahi M, Mohlenkamp T, Moroni A, Muller WF, Nociforo C, Ocker B, Petruzzelli F, Pochodzalla J, Raciti G, Riccobene G, Romano FP, Saija A.
PMID: 10990739
Phys Rev Lett. 2000 May 15;84(20):4557-60. doi: 10.1103/PhysRevLett.84.4557.

Kinetic energies of light fragments ( A

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Odeh T, Bassini R, Begemann-Blaich M, et al. Fragment kinetic energies and modes of fragment formation. Phys Rev Lett. 2000;84(20):4557-60doi: 10.1103/PhysRevLett.84.4557.
Odeh, T., Bassini, R., Begemann-Blaich, M., Fritz, S., Gaff-Ejakov, S. J., Gourio, D., Gross, C., Imme, G., Iori, I., Kleinevoss, U., Kunde, G. J., Kunze, W. D., Lynen, U., Maddalena, V., Mahi, M., Mohlenkamp, T., Moroni, A., Muller, W. F., Nociforo, C., Ocker, B., Petruzzelli, F., Pochodzalla, J., Raciti, G., Riccobene, G., Romano, F. P., & Saija, A. (2000). Fragment kinetic energies and modes of fragment formation. Physical review letters, 84(20), 4557-60. https://doi.org/10.1103/PhysRevLett.84.4557
Odeh, et al. "Fragment kinetic energies and modes of fragment formation." Physical review letters vol. 84,20 (2000): 4557-60. doi: https://doi.org/10.1103/PhysRevLett.84.4557
Odeh T, Bassini R, Begemann-Blaich M, Fritz S, Gaff-Ejakov SJ, Gourio D, Gross C, Imme G, Iori I, Kleinevoss U, Kunde GJ, Kunze WD, Lynen U, Maddalena V, Mahi M, Mohlenkamp T, Moroni A, Muller WF, Nociforo C, Ocker B, Petruzzelli F, Pochodzalla J, Raciti G, Riccobene G, Romano FP, Saija A. Fragment kinetic energies and modes of fragment formation. Phys Rev Lett. 2000 May 15;84(20):4557-60. doi: 10.1103/PhysRevLett.84.4557. PMID: 10990739.
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Solving a Hamiltonian Path Problem with a bacterial computer.

Journal of biological engineering

Baumgardner J, Acker K, Adefuye O, Crowley ST, Deloache W, Dickson JO, Heard L, Martens AT, Morton N, Ritter M, Shoecraft A, Treece J, Unzicker M, Valencia A, Waters M, Campbell AM, Heyer LJ, Poet JL, Eckdahl TT.
PMID: 19630940
J Biol Eng. 2009 Jul 24;3:11. doi: 10.1186/1754-1611-3-11.

BACKGROUND: The Hamiltonian Path Problem asks whether there is a route in a directed graph from a beginning node to an ending node, visiting each node exactly once. The Hamiltonian Path Problem is NP complete, achieving surprising computational complexity...

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Baumgardner J, Acker K, Adefuye O, et al. Solving a Hamiltonian Path Problem with a bacterial computer. J Biol Eng. 2009;3:11doi: 10.1186/1754-1611-3-11.
Baumgardner, J., Acker, K., Adefuye, O., Crowley, S. T., Deloache, W., Dickson, J. O., Heard, L., Martens, A. T., Morton, N., Ritter, M., Shoecraft, A., Treece, J., Unzicker, M., Valencia, A., Waters, M., Campbell, A. M., Heyer, L. J., Poet, J. L., & Eckdahl, T. T. (2009). Solving a Hamiltonian Path Problem with a bacterial computer. Journal of biological engineering, 311. https://doi.org/10.1186/1754-1611-3-11
Baumgardner, Jordan, et al. "Solving a Hamiltonian Path Problem with a bacterial computer." Journal of biological engineering vol. 3 (2009): 11. doi: https://doi.org/10.1186/1754-1611-3-11
Baumgardner J, Acker K, Adefuye O, Crowley ST, Deloache W, Dickson JO, Heard L, Martens AT, Morton N, Ritter M, Shoecraft A, Treece J, Unzicker M, Valencia A, Waters M, Campbell AM, Heyer LJ, Poet JL, Eckdahl TT. Solving a Hamiltonian Path Problem with a bacterial computer. J Biol Eng. 2009 Jul 24;3:11. doi: 10.1186/1754-1611-3-11. PMID: 19630940; PMCID: PMC2723075.
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Deacetylase inhibitors - focus on non-histone targets and effects.

World journal of biological chemistry

Ocker M.
PMID: 21540990
World J Biol Chem. 2010 May 26;1(5):55-61. doi: 10.4331/wjbc.v1.i5.55.

Inhibitors of protein deacetylases have recently been established as a novel therapeutic principle for several human diseases, including cancer. The original notion of the mechanism of action of these compounds focused on the epigenetic control of transcriptional processes, especially...

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Ocker M. Deacetylase inhibitors - focus on non-histone targets and effects. World J Biol Chem. 2010;1(5):55-61doi: 10.4331/wjbc.v1.i5.55.
Ocker, M. (2010). Deacetylase inhibitors - focus on non-histone targets and effects. World journal of biological chemistry, 1(5), 55-61. https://doi.org/10.4331/wjbc.v1.i5.55
Ocker, Matthias. "Deacetylase inhibitors - focus on non-histone targets and effects." World journal of biological chemistry vol. 1,5 (2010): 55-61. doi: https://doi.org/10.4331/wjbc.v1.i5.55
Ocker M. Deacetylase inhibitors - focus on non-histone targets and effects. World J Biol Chem. 2010 May 26;1(5):55-61. doi: 10.4331/wjbc.v1.i5.55. PMID: 21540990; PMCID: PMC3083950.
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[Health centers: history and future prospects.].

Sante publique (Vandoeuvre-les-Nancy, France)

Colin MP, Acker D.
PMID: 20441652
Sante Publique. 2009 Mar 29;21:57-65.

Health houses and health centers are often hailed as specifically modern forms of medical practice in mobile healthcare provision. Yet the concept of health center emerged in the seventeenth century. The founding principles of these institutions were to promote...

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Colin MP, Acker D. Les centres de santé : une histoire, un avenir. [Health centers: history and future prospects.]. Sante Publique. 2009;21:57-65
Colin, M. P., & Acker, D. (2009). Les centres de santé : une histoire, un avenir. [Health centers: history and future prospects.]. Sante publique (Vandoeuvre-les-Nancy, France), 2157-65.
Colin, Marie-Pierre, and Acker, Dominique. "Les centres de santé : une histoire, un avenir." [Health centers: history and future prospects.]. Sante publique (Vandoeuvre-les-Nancy, France) vol. 21 (2009): 57-65.
Colin MP, Acker D. Les centres de santé : une histoire, un avenir. [Health centers: history and future prospects.]. Sante Publique. 2009 Mar 29;21:57-65. French. PMID: 20441652.
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Determination of the spin torque non-adiabaticity in perpendicularly magnetized nanowires.

Journal of physics. Condensed matter : an Institute of Physics journal

Heinen J, Hinzke D, Boulle O, Malinowski G, Swagten HJ, Koopmans B, Ulysse C, Faini G, Ocker B, Wrona J, Kläui M.
PMID: 22172802
J Phys Condens Matter. 2012 Jan 18;24(2):024220. doi: 10.1088/0953-8984/24/2/024220. Epub 2011 Dec 15.

Novel nanofabrication methods and the discovery of an efficient manipulation of local magnetization based on spin polarized currents has generated a tremendous interest in the field of spintronics. The search for materials allowing for fast domain wall dynamics requires...

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Heinen J, Hinzke D, Boulle O, et al. Determination of the spin torque non-adiabaticity in perpendicularly magnetized nanowires. J Phys Condens Matter. 2011;24(2):024220doi: 10.1088/0953-8984/24/2/024220.
Heinen, J., Hinzke, D., Boulle, O., Malinowski, G., Swagten, H. J., Koopmans, B., Ulysse, C., Faini, G., Ocker, B., Wrona, J., & Kläui, M. (2012). Determination of the spin torque non-adiabaticity in perpendicularly magnetized nanowires. Journal of physics. Condensed matter : an Institute of Physics journal, 24(2), 024220. https://doi.org/10.1088/0953-8984/24/2/024220
Heinen, J, et al. "Determination of the spin torque non-adiabaticity in perpendicularly magnetized nanowires." Journal of physics. Condensed matter : an Institute of Physics journal vol. 24,2 (2012): 024220. doi: https://doi.org/10.1088/0953-8984/24/2/024220
Heinen J, Hinzke D, Boulle O, Malinowski G, Swagten HJ, Koopmans B, Ulysse C, Faini G, Ocker B, Wrona J, Kläui M. Determination of the spin torque non-adiabaticity in perpendicularly magnetized nanowires. J Phys Condens Matter. 2012 Jan 18;24(2):024220. doi: 10.1088/0953-8984/24/2/024220. Epub 2011 Dec 15. PMID: 22172802.
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Tunneling magnetothermopower in magnetic tunnel junction nanopillars.

Physical review letters

Liebing N, Serrano-Guisan S, Rott K, Reiss G, Langer J, Ocker B, Schumacher HW.
PMID: 22107572
Phys Rev Lett. 2011 Oct 21;107(17):177201. doi: 10.1103/PhysRevLett.107.177201. Epub 2011 Oct 17.

We study tunneling magnetothermopower (TMTP) in CoFeB/MgO/CoFeB magnetic tunnel junction nanopillars. Thermal gradients across the junctions are generated by an electric heater line. Thermopower voltages up to a few tens of μV between the top and bottom contact of...

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Liebing N, Serrano-Guisan S, Rott K, et al. Tunneling magnetothermopower in magnetic tunnel junction nanopillars. Phys Rev Lett. 2011;107(17):177201doi: 10.1103/PhysRevLett.107.177201.
Liebing, N., Serrano-Guisan, S., Rott, K., Reiss, G., Langer, J., Ocker, B., & Schumacher, H. W. (2011). Tunneling magnetothermopower in magnetic tunnel junction nanopillars. Physical review letters, 107(17), 177201. https://doi.org/10.1103/PhysRevLett.107.177201
Liebing, N, et al. "Tunneling magnetothermopower in magnetic tunnel junction nanopillars." Physical review letters vol. 107,17 (2011): 177201. doi: https://doi.org/10.1103/PhysRevLett.107.177201
Liebing N, Serrano-Guisan S, Rott K, Reiss G, Langer J, Ocker B, Schumacher HW. Tunneling magnetothermopower in magnetic tunnel junction nanopillars. Phys Rev Lett. 2011 Oct 21;107(17):177201. doi: 10.1103/PhysRevLett.107.177201. Epub 2011 Oct 17. PMID: 22107572.
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Showing 1 to 12 of 252 entries