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The influence of ecological and geographical context in the radiation of Neotropical sigmodontine rodents

STEM and diversify

D'Elía G, Palma RE, Parada A.
GSID: tzpdmV0wxvQJ
A Parada, G D'Elía, RE Palma - BMC …, 2015 - bmcecolevol.biomedcentral.com

… the Neogene might have provided vast resources and opportunity to diversify. The aim of this study was to … Our relaxed clock inferred a stem age of 9.91 Mya (95 % HPD 8.42-11.53) for …

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Parada, A., D’Elía, G., & Palma, R. E. (2015). The influence of ecological and geographical context in the radiation of Neotropical sigmodontine rodents. BMC evolutionary biology, 15(1), 1-17.
Parada, Andrés, Guillermo D’Elía, and R. Eduardo Palma. "The influence of ecological and geographical context in the radiation of Neotropical sigmodontine rodents." BMC evolutionary biology 15.1 (2015): 1-17.
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The nature of race relations

race as an overall term & individual races (e.g. American Indian

Park RE.
GSID: UhwQnLw_mgEJ
RE Park - Theories of race and racism, 2020 - taylorfrancis.com

… between individuals of different races as between individuals … the term is ordinarily used, that there are, to be sure, races in … for example, the interesting little communities of Negro, Indian…

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Park, R. E. (2020). The nature of race relations. In Theories of race and racism (pp. 166-173). Routledge.
Park, Robert E. "The nature of race relations." Theories of race and racism. Routledge, 2020. 166-173.
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Acoustoelasticity in cancellous bone.

The Journal of the Acoustical Society of America

Apostolopoulos K, Pappa E, Deligianni D.
PMID: 28147625
J Acoust Soc Am. 2017 Jan;141(1):EL22. doi: 10.1121/1.4973672.

Strain-dependence of ultrasound speed in cancellous bone was determined by applying a range of uniaxial compressive strains in the elasticity region, in a single direction, parallel or perpendicular to the propagating wave. Compressive strain modulated the ultrasound speed significantly....

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Apostolopoulos K, Pappa E, Deligianni D. Acoustoelasticity in cancellous bone. J Acoust Soc Am. 2017;141(1):EL22doi: 10.1121/1.4973672.
Apostolopoulos, K., Pappa, E., & Deligianni, D. (2017). Acoustoelasticity in cancellous bone. The Journal of the Acoustical Society of America, 141(1), EL22. https://doi.org/10.1121/1.4973672
Apostolopoulos, K, et al. "Acoustoelasticity in cancellous bone." The Journal of the Acoustical Society of America vol. 141,1 (2017): EL22. doi: https://doi.org/10.1121/1.4973672
Apostolopoulos K, Pappa E, Deligianni D. Acoustoelasticity in cancellous bone. J Acoust Soc Am. 2017 Jan;141(1):EL22. doi: 10.1121/1.4973672. PMID: 28147625.
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Interstitial .

Molecular cytogenetics

Tassano E, Severino M, Rosina S, Papa R, Tortora D, Gimelli G, Cuoco C, Picco P.
PMID: 27766118
Mol Cytogenet. 2016 Oct 10;9:78. doi: 10.1186/s13039-016-0285-1. eCollection 2016.

BACKGROUND: Deletions of the long arm of chromosome 18 cause a common autosomal syndrome clinically characterized by a protean clinical phenotype.CASE PRESENTATION: We report on a 16-month-old male infant affected by fever attacks apparently unrelated with any infectious or...

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Tassano E, Severino M, Rosina S, et al. Interstitial . Mol Cytogenet. 2016;9:78doi: 10.1186/s13039-016-0285-1.
Tassano, E., Severino, M., Rosina, S., Papa, R., Tortora, D., Gimelli, G., Cuoco, C., & Picco, P. (2016). Interstitial . Molecular cytogenetics, 978. https://doi.org/10.1186/s13039-016-0285-1
Tassano, Elisa, et al. "Interstitial ." Molecular cytogenetics vol. 9 (2016): 78. doi: https://doi.org/10.1186/s13039-016-0285-1
Tassano E, Severino M, Rosina S, Papa R, Tortora D, Gimelli G, Cuoco C, Picco P. Interstitial . Mol Cytogenet. 2016 Oct 10;9:78. doi: 10.1186/s13039-016-0285-1. eCollection 2016. PMID: 27766118; PMCID: PMC5057431.
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Linkage disequilibrium and population structure in wild and domesticated populations of Phaseolus vulgaris L.

Evolutionary applications

Rossi M, Bitocchi E, Bellucci E, Nanni L, Rau D, Attene G, Papa R.
PMID: 25567895
Evol Appl. 2009 Nov;2(4):504-22. doi: 10.1111/j.1752-4571.2009.00082.x. Epub 2009 Jul 03.

Together with the knowledge of the population structure, a critical aspect for the planning of association and/or population genomics studies is the level of linkage disequilibrium (LD) that characterizes the species and the population used for such an analysis....

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Rossi M, Bitocchi E, Bellucci E, et al. Linkage disequilibrium and population structure in wild and domesticated populations of Phaseolus vulgaris L. Evol Appl. 2009;2(4):504-22doi: 10.1111/j.1752-4571.2009.00082.x.
Rossi, M., Bitocchi, E., Bellucci, E., Nanni, L., Rau, D., Attene, G., & Papa, R. (2009). Linkage disequilibrium and population structure in wild and domesticated populations of Phaseolus vulgaris L. Evolutionary applications, 2(4), 504-22. https://doi.org/10.1111/j.1752-4571.2009.00082.x
Rossi, Monica, et al. "Linkage disequilibrium and population structure in wild and domesticated populations of Phaseolus vulgaris L." Evolutionary applications vol. 2,4 (2009): 504-22. doi: https://doi.org/10.1111/j.1752-4571.2009.00082.x
Rossi M, Bitocchi E, Bellucci E, Nanni L, Rau D, Attene G, Papa R. Linkage disequilibrium and population structure in wild and domesticated populations of Phaseolus vulgaris L. Evol Appl. 2009 Nov;2(4):504-22. doi: 10.1111/j.1752-4571.2009.00082.x. Epub 2009 Jul 03. PMID: 25567895; PMCID: PMC3352449.
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Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.).

Frontiers in plant science

Iannucci A, Fragasso M, Platani C, Papa R.
PMID: 24381576
Front Plant Sci. 2013 Dec 17;4:509. doi: 10.3389/fpls.2013.00509. eCollection 2013.

The objectives of this study were to determine the pattern of dry matter (DM) accumulation and the evolution of phenolic compounds in the rhizosphere soil from tillering to the ripe seed stages of wild oat (Avena fatua L.), a...

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Iannucci A, Fragasso M, Platani C, et al. Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.). Front Plant Sci. 2013;4:509doi: 10.3389/fpls.2013.00509.
Iannucci, A., Fragasso, M., Platani, C., & Papa, R. (2013). Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.). Frontiers in plant science, 4509. https://doi.org/10.3389/fpls.2013.00509
Iannucci, Anna, et al. "Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.)." Frontiers in plant science vol. 4 (2013): 509. doi: https://doi.org/10.3389/fpls.2013.00509
Iannucci A, Fragasso M, Platani C, Papa R. Plant growth and phenolic compounds in the rhizosphere soil of wild oat (Avena fatua L.). Front Plant Sci. 2013 Dec 17;4:509. doi: 10.3389/fpls.2013.00509. eCollection 2013. PMID: 24381576; PMCID: PMC3865607.
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Inteins as indicators of gene flow in the halobacteria.

Frontiers in microbiology

Soucy SM, Fullmer MS, Papke RT, Gogarten JP.
PMID: 25018750
Front Microbiol. 2014 Jun 26;5:299. doi: 10.3389/fmicb.2014.00299. eCollection 2014.

This research uses inteins, a type of mobile genetic element, to infer patterns of gene transfer within the Halobacteria. We surveyed 118 genomes representing 26 genera of Halobacteria for intein sequences. We then used the presence-absence profile, sequence similarity...

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Soucy SM, Fullmer MS, Papke RT, et al. Inteins as indicators of gene flow in the halobacteria. Front Microbiol. 2014;5:299doi: 10.3389/fmicb.2014.00299.
Soucy, S. M., Fullmer, M. S., Papke, R. T., & Gogarten, J. P. (2014). Inteins as indicators of gene flow in the halobacteria. Frontiers in microbiology, 5299. https://doi.org/10.3389/fmicb.2014.00299
Soucy, Shannon M, et al. "Inteins as indicators of gene flow in the halobacteria." Frontiers in microbiology vol. 5 (2014): 299. doi: https://doi.org/10.3389/fmicb.2014.00299
Soucy SM, Fullmer MS, Papke RT, Gogarten JP. Inteins as indicators of gene flow in the halobacteria. Front Microbiol. 2014 Jun 26;5:299. doi: 10.3389/fmicb.2014.00299. eCollection 2014. PMID: 25018750; PMCID: PMC4071816.
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Pilot Study and Review: Physiological Differences in BDNF, a Potential Biomarker in Males and Females with Autistic Disorder.

International neuropsychiatric disease journal

Spratt EG, Granholm AC, Carpenter LA, Boger HA, Papa CE, Logan S, Chaudhary H, Boatwright SW, Brady KT.
PMID: 26866045
Int Neuropsychiatr Dis J. 2015;3(1):19-26. doi: 10.9734/INDJ/2015/12118. Epub 2014 Sep 24.

AIMS: There is a need for more biologic research in autistic disorder (AD) to determine if biomarkers exist that would be useful for correlating to symptom severity and/or clinical improvement during treatment. Given the fact that AD is 4...

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Spratt EG, Granholm AC, Carpenter LA, et al. Pilot Study and Review: Physiological Differences in BDNF, a Potential Biomarker in Males and Females with Autistic Disorder. Int Neuropsychiatr Dis J. 2014;3(1):19-26doi: 10.9734/INDJ/2015/12118.
Spratt, E. G., Granholm, A. C., Carpenter, L. A., Boger, H. A., Papa, C. E., Logan, S., Chaudhary, H., Boatwright, S. W., & Brady, K. T. (2015). Pilot Study and Review: Physiological Differences in BDNF, a Potential Biomarker in Males and Females with Autistic Disorder. International neuropsychiatric disease journal, 3(1), 19-26. https://doi.org/10.9734/INDJ/2015/12118
Spratt, Eve G, et al. "Pilot Study and Review: Physiological Differences in BDNF, a Potential Biomarker in Males and Females with Autistic Disorder." International neuropsychiatric disease journal vol. 3,1 (2015): 19-26. doi: https://doi.org/10.9734/INDJ/2015/12118
Spratt EG, Granholm AC, Carpenter LA, Boger HA, Papa CE, Logan S, Chaudhary H, Boatwright SW, Brady KT. Pilot Study and Review: Physiological Differences in BDNF, a Potential Biomarker in Males and Females with Autistic Disorder. Int Neuropsychiatr Dis J. 2015;3(1):19-26. doi: 10.9734/INDJ/2015/12118. Epub 2014 Sep 24. PMID: 26866045; PMCID: PMC4746008.
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Genome-wide DNA methylation analysis of Haloferax volcanii H26 and identification of DNA methyltransferase related PD-(D/E)XK nuclease family protein HVO_A0006.

Frontiers in microbiology

Ouellette M, Jackson L, Chimileski S, Papke RT.
PMID: 25904898
Front Microbiol. 2015 Apr 08;6:251. doi: 10.3389/fmicb.2015.00251. eCollection 2015.

Restriction-modification (RM) systems have evolved to protect the cell from invading DNAs and are composed of two enzymes: a DNA methyltransferase and a restriction endonuclease. Although RM systems are present in both archaeal and bacterial genomes, DNA methylation in...

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Ouellette M, Jackson L, Chimileski S, et al. Genome-wide DNA methylation analysis of Haloferax volcanii H26 and identification of DNA methyltransferase related PD-(D/E)XK nuclease family protein HVO_A0006. Front Microbiol. 2015;6:251doi: 10.3389/fmicb.2015.00251.
Ouellette, M., Jackson, L., Chimileski, S., & Papke, R. T. (2015). Genome-wide DNA methylation analysis of Haloferax volcanii H26 and identification of DNA methyltransferase related PD-(D/E)XK nuclease family protein HVO_A0006. Frontiers in microbiology, 6251. https://doi.org/10.3389/fmicb.2015.00251
Ouellette, Matthew, et al. "Genome-wide DNA methylation analysis of Haloferax volcanii H26 and identification of DNA methyltransferase related PD-(D/E)XK nuclease family protein HVO_A0006." Frontiers in microbiology vol. 6 (2015): 251. doi: https://doi.org/10.3389/fmicb.2015.00251
Ouellette M, Jackson L, Chimileski S, Papke RT. Genome-wide DNA methylation analysis of Haloferax volcanii H26 and identification of DNA methyltransferase related PD-(D/E)XK nuclease family protein HVO_A0006. Front Microbiol. 2015 Apr 08;6:251. doi: 10.3389/fmicb.2015.00251. eCollection 2015. PMID: 25904898; PMCID: PMC4389544.
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Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations.

Frontiers in microbiology

Ram Mohan N, Fullmer MS, Makkay AM, Wheeler R, Ventosa A, Naor A, Gogarten JP, Papke RT.
PMID: 24782838
Front Microbiol. 2014 Apr 09;5:143. doi: 10.3389/fmicb.2014.00143. eCollection 2014.

Halobacteria require high NaCl concentrations for growth and are the dominant inhabitants of hypersaline environments above 15% NaCl. They are well-documented to be highly recombinogenic, both in frequency and in the range of exchange partners. In this study, we...

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Ram Mohan N, Fullmer MS, Makkay AM, et al. Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations. Front Microbiol. 2014;5:143doi: 10.3389/fmicb.2014.00143.
Ram Mohan, N., Fullmer, M. S., Makkay, A. M., Wheeler, R., Ventosa, A., Naor, A., Gogarten, J. P., & Papke, R. T. (2014). Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations. Frontiers in microbiology, 5143. https://doi.org/10.3389/fmicb.2014.00143
Ram Mohan, Nikhil, et al. "Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations." Frontiers in microbiology vol. 5 (2014): 143. doi: https://doi.org/10.3389/fmicb.2014.00143
Ram Mohan N, Fullmer MS, Makkay AM, Wheeler R, Ventosa A, Naor A, Gogarten JP, Papke RT. Evidence from phylogenetic and genome fingerprinting analyses suggests rapidly changing variation in Halorubrum and Haloarcula populations. Front Microbiol. 2014 Apr 09;5:143. doi: 10.3389/fmicb.2014.00143. eCollection 2014. PMID: 24782838; PMCID: PMC3988388.
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Visualizing large, heterogeneous data in hybrid-reality environments.

IEEE computer graphics and applications

Reda K, Febretti A, Knoll A, Aurisano J, Leigh J, Johnson A, Papka ME, Hereld M.
PMID: 24808058
IEEE Comput Graph Appl. 2013 Jul-Aug;33(4):38-48. doi: 10.1109/MCG.2013.37.

Constructing integrative visualizations that simultaneously cater to a variety of data types is challenging. Hybrid-reality environments blur the line between virtual environments and tiled display walls. They incorporate high-resolution, stereoscopic displays, which can be used to juxtapose large, heterogeneous...

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Reda K, Febretti A, Knoll A, et al. Visualizing large, heterogeneous data in hybrid-reality environments. IEEE Comput Graph Appl. 2013;33(4):38-48doi: 10.1109/MCG.2013.37.
Reda, K., Febretti, A., Knoll, A., Aurisano, J., Leigh, J., Johnson, A., Papka, M. E., & Hereld, M. (2013). Visualizing large, heterogeneous data in hybrid-reality environments. IEEE computer graphics and applications, 33(4), 38-48. https://doi.org/10.1109/MCG.2013.37
Reda, Khairi, et al. "Visualizing large, heterogeneous data in hybrid-reality environments." IEEE computer graphics and applications vol. 33,4 (2013): 38-48. doi: https://doi.org/10.1109/MCG.2013.37
Reda K, Febretti A, Knoll A, Aurisano J, Leigh J, Johnson A, Papka ME, Hereld M. Visualizing large, heterogeneous data in hybrid-reality environments. IEEE Comput Graph Appl. 2013 Jul-Aug;33(4):38-48. doi: 10.1109/MCG.2013.37. PMID: 24808058.
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Synovial cyst of dens axis. A case report.

The neuroradiology journal

Riva G, Puglisi CG, Giudice A, Papa R, Cavallaro T, Chiaramonte I, Pero G.
PMID: 24351226
Neuroradiol J. 2006 Jun 30;19(3):379-81. doi: 10.1177/197140090601900318. Epub 2006 Jun 30.

Synovial cyst of dens axis is a rare pathology accounting for 0.5%-1% of all cases of spinal synovial cysts. The lesion is normally found in the final part of the lumbar tract. The etiopathogenesis is uncertain and many theories...

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Riva G, Puglisi CG, Giudice A, et al. Synovial cyst of dens axis. A case report. Neuroradiol J. 2006;19(3):379-81doi: 10.1177/197140090601900318.
Riva, G., Puglisi, C. G., Giudice, A., Papa, R., Cavallaro, T., Chiaramonte, I., & Pero, G. (2006). Synovial cyst of dens axis. A case report. The neuroradiology journal, 19(3), 379-81. https://doi.org/10.1177/197140090601900318
Riva, G, et al. "Synovial cyst of dens axis. A case report." The neuroradiology journal vol. 19,3 (2006): 379-81. doi: https://doi.org/10.1177/197140090601900318
Riva G, Puglisi CG, Giudice A, Papa R, Cavallaro T, Chiaramonte I, Pero G. Synovial cyst of dens axis. A case report. Neuroradiol J. 2006 Jun 30;19(3):379-81. doi: 10.1177/197140090601900318. Epub 2006 Jun 30. PMID: 24351226.
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Showing 1 to 12 of 208 entries