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IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723.

IMA fungus

Wingfield BD, Ambler JM, Coetzee MP, de Beer ZW, Duong TA, Joubert F, Hammerbacher A, McTaggart AR, Naidoo K, Nguyen HD, Ponomareva E, Santana QS, Seifert KA, Steenkamp ET, Trollip C, van der Nest MA, Visagie CM, Wilken PM, Wingfield MJ, Yilmaz N.
PMID: 27433447
IMA Fungus. 2016 Jun;7(1):217-27. doi: 10.5598/imafungus.2016.07.01.11. Epub 2016 Jun 21.

The genomes of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica, and Penicillium freii DAOMC 242723 are presented in this genome announcement. These six genomes are from plant pathogens and otherwise economically important fungal species. The genome...

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Wingfield BD, Ambler JM, Coetzee MP, et al. IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723. IMA Fungus. 2016;7(1):217-27doi: 10.5598/imafungus.2016.07.01.11.
Wingfield, B. D., Ambler, J. M., Coetzee, M. P., de Beer, Z. W., Duong, T. A., Joubert, F., Hammerbacher, A., McTaggart, A. R., Naidoo, K., Nguyen, H. D., Ponomareva, E., Santana, Q. S., Seifert, K. A., Steenkamp, E. T., Trollip, C., van der Nest, M. A., Visagie, C. M., Wilken, P. M., Wingfield, M. J., & Yilmaz, N. (2016). IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723. IMA fungus, 7(1), 217-27. https://doi.org/10.5598/imafungus.2016.07.01.11
Wingfield, Brenda D, et al. "IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723." IMA fungus vol. 7,1 (2016): 217-27. doi: https://doi.org/10.5598/imafungus.2016.07.01.11
Wingfield BD, Ambler JM, Coetzee MP, de Beer ZW, Duong TA, Joubert F, Hammerbacher A, McTaggart AR, Naidoo K, Nguyen HD, Ponomareva E, Santana QS, Seifert KA, Steenkamp ET, Trollip C, van der Nest MA, Visagie CM, Wilken PM, Wingfield MJ, Yilmaz N. IMA Genome-F 6: Draft genome sequences of Armillaria fuscipes, Ceratocystiopsis minuta, Ceratocystis adiposa, Endoconidiophora laricicola, E. polonica and Penicillium freii DAOMC 242723. IMA Fungus. 2016 Jun;7(1):217-27. doi: 10.5598/imafungus.2016.07.01.11. Epub 2016 Jun 21. PMID: 27433447; PMCID: PMC4941685.
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Clinical trials using the Shang Ring device for male circumcision in Africa: a review.

Translational andrology and urology

Barone MA, Li PS, Awori QD, Lee R, Goldstein M.
PMID: 26816759
Transl Androl Urol. 2014 Mar;3(1):113-24. doi: 10.3978/j.issn.2223-4683.2014.01.09.

Male circumcision (MC) reduces the risk of HIV and other sexually transmitted infections (STIs), including human papillomavirus (HPV) and herpes simplex virus type 2 (HSV-2), and is recommended as an important component of a comprehensive package of HIV prevention...

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Barone MA, Li PS, Awori QD, et al. Clinical trials using the Shang Ring device for male circumcision in Africa: a review. Transl Androl Urol. 2014;3(1):113-24doi: 10.3978/j.issn.2223-4683.2014.01.09.
Barone, M. A., Li, P. S., Awori, Q. D., Lee, R., & Goldstein, M. (2014). Clinical trials using the Shang Ring device for male circumcision in Africa: a review. Translational andrology and urology, 3(1), 113-24. https://doi.org/10.3978/j.issn.2223-4683.2014.01.09
Barone, Mark A, et al. "Clinical trials using the Shang Ring device for male circumcision in Africa: a review." Translational andrology and urology vol. 3,1 (2014): 113-24. doi: https://doi.org/10.3978/j.issn.2223-4683.2014.01.09
Barone MA, Li PS, Awori QD, Lee R, Goldstein M. Clinical trials using the Shang Ring device for male circumcision in Africa: a review. Transl Androl Urol. 2014 Mar;3(1):113-24. doi: 10.3978/j.issn.2223-4683.2014.01.09. PMID: 26816759; PMCID: PMC4708291.
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Fluctuation Scaling, Calibration of Dispersion, and Detection of Differences.

Analytical chemistry

Holland R, Rebmann R, Williams C, Hanley QS.
PMID: 29019236
Anal Chem. 2017 Nov 07;89(21):11568-11575. doi: 10.1021/acs.analchem.7b02909. Epub 2017 Oct 26.

Fluctuation scaling describes the relationship between the mean and standard deviation of a set of measurements. An example is Horwitz scaling, which has been reported from interlaboratory studies. Horwitz and similar studies have reported simple exponential and segmented scaling...

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Holland R, Rebmann R, Williams C, et al. Fluctuation Scaling, Calibration of Dispersion, and Detection of Differences. Anal Chem. 2017;89(21):11568-11575doi: 10.1021/acs.analchem.7b02909.
Holland, R., Rebmann, R., Williams, C., & Hanley, Q. S. (2017). Fluctuation Scaling, Calibration of Dispersion, and Detection of Differences. Analytical chemistry, 89(21), 11568-11575. https://doi.org/10.1021/acs.analchem.7b02909
Holland, Rianne, et al. "Fluctuation Scaling, Calibration of Dispersion, and Detection of Differences." Analytical chemistry vol. 89,21 (2017): 11568-11575. doi: https://doi.org/10.1021/acs.analchem.7b02909
Holland R, Rebmann R, Williams C, Hanley QS. Fluctuation Scaling, Calibration of Dispersion, and Detection of Differences. Anal Chem. 2017 Nov 07;89(21):11568-11575. doi: 10.1021/acs.analchem.7b02909. Epub 2017 Oct 26. PMID: 29019236.
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Atomic-Resolution Spectrum Imaging of Semiconductor Nanowires.

Nano letters

Zamani RR, Hage FS, Lehmann S, Ramasse QM, Dick KA.
PMID: 29116807
Nano Lett. 2018 Mar 14;18(3):1557-1563. doi: 10.1021/acs.nanolett.7b03929. Epub 2017 Nov 13.

Over the past decade, III-V heterostructure nanowires have attracted a surge of attention for their application in novel semiconductor devices such as tunneling field-effect transistors (TFETs). The functionality of such devices critically depends on the specific atomic arrangement at...

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Zamani RR, Hage FS, Lehmann S, et al. Atomic-Resolution Spectrum Imaging of Semiconductor Nanowires. Nano Lett. 2017;18(3):1557-1563doi: 10.1021/acs.nanolett.7b03929.
Zamani, R. R., Hage, F. S., Lehmann, S., Ramasse, Q. M., & Dick, K. A. (2018). Atomic-Resolution Spectrum Imaging of Semiconductor Nanowires. Nano letters, 18(3), 1557-1563. https://doi.org/10.1021/acs.nanolett.7b03929
Zamani, Reza R, et al. "Atomic-Resolution Spectrum Imaging of Semiconductor Nanowires." Nano letters vol. 18,3 (2018): 1557-1563. doi: https://doi.org/10.1021/acs.nanolett.7b03929
Zamani RR, Hage FS, Lehmann S, Ramasse QM, Dick KA. Atomic-Resolution Spectrum Imaging of Semiconductor Nanowires. Nano Lett. 2018 Mar 14;18(3):1557-1563. doi: 10.1021/acs.nanolett.7b03929. Epub 2017 Nov 13. PMID: 29116807.
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Characterisation of false-positive observations in botanical surveys.

PeerJ

Groom QJ, Whild SJ.
PMID: 28533972
PeerJ. 2017 May 17;5:e3324. doi: 10.7717/peerj.3324. eCollection 2017.

Errors in botanical surveying are a common problem. The presence of a species is easily overlooked, leading to false-absences; while misidentifications and other mistakes lead to false-positive observations. While it is common knowledge that these errors occur, there are...

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Groom QJ, Whild SJ. Characterisation of false-positive observations in botanical surveys. PeerJ. 2017;5:e3324doi: 10.7717/peerj.3324.
Groom, Q. J., & Whild, S. J. (2017). Characterisation of false-positive observations in botanical surveys. PeerJ, 5e3324. https://doi.org/10.7717/peerj.3324
Groom, Quentin J, and Whild, Sarah J. "Characterisation of false-positive observations in botanical surveys." PeerJ vol. 5 (2017): e3324. doi: https://doi.org/10.7717/peerj.3324
Groom QJ, Whild SJ. Characterisation of false-positive observations in botanical surveys. PeerJ. 2017 May 17;5:e3324. doi: 10.7717/peerj.3324. eCollection 2017. PMID: 28533972; PMCID: PMC5437866.
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Crystal structure of borated N,N,N',N'-tetra-methyldi-amino-methane.

Acta crystallographica. Section E, Crystallographic communications

Louven K, Quentin G, Strohmann C.
PMID: 26594453
Acta Crystallogr E Crystallogr Commun. 2015 Sep 12;71:o743-4. doi: 10.1107/S2056989015016813. eCollection 2015 Oct 01.

In the title compound, {[(di-methyl-amino)-meth-yl]di-methyl-amine}-trihydridoboron, C5H17BN2, the tetra-hedral geometry of the N-C-N unit is slightly disorted. As a result of the bulky amine substituents, a wider N-C-N angle of 113.6 (1)° is observed. The bond lengths between the N...

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Louven K, Quentin G, Strohmann C. Crystal structure of borated N,N,N',N'-tetra-methyldi-amino-methane. Acta Crystallogr E Crystallogr Commun. 2015;71:o743-4doi: 10.1107/S2056989015016813.
Louven, K., Quentin, G., & Strohmann, C. (2015). Crystal structure of borated N,N,N',N'-tetra-methyldi-amino-methane. Acta crystallographica. Section E, Crystallographic communications, 71o743-4. https://doi.org/10.1107/S2056989015016813
Louven, Kathrin, et al. "Crystal structure of borated N,N,N',N'-tetra-methyldi-amino-methane." Acta crystallographica. Section E, Crystallographic communications vol. 71 (2015): o743-4. doi: https://doi.org/10.1107/S2056989015016813
Louven K, Quentin G, Strohmann C. Crystal structure of borated N,N,N',N'-tetra-methyldi-amino-methane. Acta Crystallogr E Crystallogr Commun. 2015 Sep 12;71:o743-4. doi: 10.1107/S2056989015016813. eCollection 2015 Oct 01. PMID: 26594453; PMCID: PMC4647418.
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Controlling the Electrical Transport Properties of Nanocontacts to Nanowires.

Nano letters

Lord AM, Maffeis TG, Kryvchenkova O, Cobley RJ, Kalna K, Kepaptsoglou DM, Ramasse QM, Walton AS, Ward MB, Köble J, Wilks SP.
PMID: 26042356
Nano Lett. 2015 Jul 08;15(7):4248-54. doi: 10.1021/nl503743t. Epub 2015 Jun 11.

The ability to control the properties of electrical contacts to nanostructures is essential to realize operational nanodevices. Here, we show that the electrical behavior of the nanocontacts between free-standing ZnO nanowires and the catalytic Au particle used for their...

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Lord AM, Maffeis TG, Kryvchenkova O, et al. Controlling the Electrical Transport Properties of Nanocontacts to Nanowires. Nano Lett. 2015;15(7):4248-54doi: 10.1021/nl503743t.
Lord, A. M., Maffeis, T. G., Kryvchenkova, O., Cobley, R. J., Kalna, K., Kepaptsoglou, D. M., Ramasse, Q. M., Walton, A. S., Ward, M. B., Köble, J., & Wilks, S. P. (2015). Controlling the Electrical Transport Properties of Nanocontacts to Nanowires. Nano letters, 15(7), 4248-54. https://doi.org/10.1021/nl503743t
Lord, Alex M, et al. "Controlling the Electrical Transport Properties of Nanocontacts to Nanowires." Nano letters vol. 15,7 (2015): 4248-54. doi: https://doi.org/10.1021/nl503743t
Lord AM, Maffeis TG, Kryvchenkova O, Cobley RJ, Kalna K, Kepaptsoglou DM, Ramasse QM, Walton AS, Ward MB, Köble J, Wilks SP. Controlling the Electrical Transport Properties of Nanocontacts to Nanowires. Nano Lett. 2015 Jul 08;15(7):4248-54. doi: 10.1021/nl503743t. Epub 2015 Jun 11. PMID: 26042356.
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The nature of the silicaphilic fluorescence of PDMPO.

Physical chemistry chemical physics : PCCP

Parambath M, Hanley QS, Martin-Martinez FJ, Giesa T, Buehler MJ, Perry CC.
PMID: 26685751
Phys Chem Chem Phys. 2016 Feb 17;18(8):5938-48. doi: 10.1039/c5cp05105c.

PDMPO (2-(4-pyridyl)-5-((4-(2-dimethylaminoethylaminocarbamoyl)methoxy)phenyl)oxazole), has unique silica specific fluorescence and is used in biology to understand biosilicification. This 'silicaphilic' fluorescence is not well understood nor is the response to local environmental variables like solvent and pH. We investigated PDMPO in a...

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Parambath M, Hanley QS, Martin-Martinez FJ, et al. The nature of the silicaphilic fluorescence of PDMPO. Phys Chem Chem Phys. 2016;18(8):5938-48doi: 10.1039/c5cp05105c.
Parambath, M., Hanley, Q. S., Martin-Martinez, F. J., Giesa, T., Buehler, M. J., & Perry, C. C. (2016). The nature of the silicaphilic fluorescence of PDMPO. Physical chemistry chemical physics : PCCP, 18(8), 5938-48. https://doi.org/10.1039/c5cp05105c
Parambath, Mithun, et al. "The nature of the silicaphilic fluorescence of PDMPO." Physical chemistry chemical physics : PCCP vol. 18,8 (2016): 5938-48. doi: https://doi.org/10.1039/c5cp05105c
Parambath M, Hanley QS, Martin-Martinez FJ, Giesa T, Buehler MJ, Perry CC. The nature of the silicaphilic fluorescence of PDMPO. Phys Chem Chem Phys. 2016 Feb 17;18(8):5938-48. doi: 10.1039/c5cp05105c. PMID: 26685751.
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Correction to 'Magnetic targeting of microbubbles against physiologically relevant flow conditions'.

Interface focus

Owen J, Rademeyer P, Chung D, Cheng Q, Holroyd D, Coussios C, Friend P, Pankhurst QA, Stride E.
PMID: 26855764
Interface Focus. 2016 Feb 06;6(1):20150097. doi: 10.1098/rsfs.2015.0097.

[This corrects the article DOI: 10.1098/rsfs.2015.0001.].

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Owen J, Rademeyer P, Chung D, et al. Correction to 'Magnetic targeting of microbubbles against physiologically relevant flow conditions'. Interface Focus. 2016;6(1):20150097doi: 10.1098/rsfs.2015.0097.
Owen, J., Rademeyer, P., Chung, D., Cheng, Q., Holroyd, D., Coussios, C., Friend, P., Pankhurst, Q. A., & Stride, E. (2016). Correction to 'Magnetic targeting of microbubbles against physiologically relevant flow conditions'. Interface focus, 6(1), 20150097. https://doi.org/10.1098/rsfs.2015.0097
Owen, Joshua, et al. "Correction to 'Magnetic targeting of microbubbles against physiologically relevant flow conditions'." Interface focus vol. 6,1 (2016): 20150097. doi: https://doi.org/10.1098/rsfs.2015.0097
Owen J, Rademeyer P, Chung D, Cheng Q, Holroyd D, Coussios C, Friend P, Pankhurst QA, Stride E. Correction to 'Magnetic targeting of microbubbles against physiologically relevant flow conditions'. Interface Focus. 2016 Feb 06;6(1):20150097. doi: 10.1098/rsfs.2015.0097. PMID: 26855764; PMCID: PMC4686253.
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Fibroblast growth factors as tissue repair and regeneration therapeutics.

PeerJ

Nunes QM, Li Y, Sun C, Kinnunen TK, Fernig DG.
PMID: 26793421
PeerJ. 2016 Jan 12;4:e1535. doi: 10.7717/peerj.1535. eCollection 2016.

Cell communication is central to the integration of cell function required for the development and homeostasis of multicellular animals. Proteins are an important currency of cell communication, acting locally (auto-, juxta-, or paracrine) or systemically (endocrine). The fibroblast growth...

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Nunes QM, Li Y, Sun C, et al. Fibroblast growth factors as tissue repair and regeneration therapeutics. PeerJ. 2016;4:e1535doi: 10.7717/peerj.1535.
Nunes, Q. M., Li, Y., Sun, C., Kinnunen, T. K., & Fernig, D. G. (2016). Fibroblast growth factors as tissue repair and regeneration therapeutics. PeerJ, 4e1535. https://doi.org/10.7717/peerj.1535
Nunes, Quentin M, et al. "Fibroblast growth factors as tissue repair and regeneration therapeutics." PeerJ vol. 4 (2016): e1535. doi: https://doi.org/10.7717/peerj.1535
Nunes QM, Li Y, Sun C, Kinnunen TK, Fernig DG. Fibroblast growth factors as tissue repair and regeneration therapeutics. PeerJ. 2016 Jan 12;4:e1535. doi: 10.7717/peerj.1535. eCollection 2016. PMID: 26793421; PMCID: PMC4715458.
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Stabilisation of Fe2O3-rich Perovskite Nanophase in Epitaxial Rare-earth Doped BiFeO3 Films.

Scientific reports

Zhang H, Reaney IM, Marincel DM, Trolier-McKinstry S, Ramasse QM, MacLaren I, Findlay SD, Fraleigh RD, Ross IM, Hu S, Ren W, Rainforth WM.
PMID: 26272264
Sci Rep. 2015 Aug 14;5:13066. doi: 10.1038/srep13066.

Researchers have demonstrated that BiFeO3 exhibits ferroelectric hysteresis but none have shown a strong ferromagnetic response in either bulk or thin film without significant structural or compositional modification. When remanent magnetisations are observed in BiFeO3 based thin films, iron...

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Zhang H, Reaney IM, Marincel DM, et al. Stabilisation of Fe2O3-rich Perovskite Nanophase in Epitaxial Rare-earth Doped BiFeO3 Films. Sci Rep. 2015;5:13066doi: 10.1038/srep13066.
Zhang, H., Reaney, I. M., Marincel, D. M., Trolier-McKinstry, S., Ramasse, Q. M., MacLaren, I., Findlay, S. D., Fraleigh, R. D., Ross, I. M., Hu, S., Ren, W., & Rainforth, W. M. (2015). Stabilisation of Fe2O3-rich Perovskite Nanophase in Epitaxial Rare-earth Doped BiFeO3 Films. Scientific reports, 513066. https://doi.org/10.1038/srep13066
Zhang, Huairuo, et al. "Stabilisation of Fe2O3-rich Perovskite Nanophase in Epitaxial Rare-earth Doped BiFeO3 Films." Scientific reports vol. 5 (2015): 13066. doi: https://doi.org/10.1038/srep13066
Zhang H, Reaney IM, Marincel DM, Trolier-McKinstry S, Ramasse QM, MacLaren I, Findlay SD, Fraleigh RD, Ross IM, Hu S, Ren W, Rainforth WM. Stabilisation of Fe2O3-rich Perovskite Nanophase in Epitaxial Rare-earth Doped BiFeO3 Films. Sci Rep. 2015 Aug 14;5:13066. doi: 10.1038/srep13066. PMID: 26272264; PMCID: PMC4536528.
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PETMiner-A Visual Analysis Tool for Petrophysical Properties of Core Sample Data.

IEEE transactions on visualization and computer graphics

Harrison DG, Efford ND, Fisher QJ, Ruddle RA.
PMID: 28320668
IEEE Trans Vis Comput Graph. 2018 May;24(5):1728-1741. doi: 10.1109/TVCG.2017.2682865. Epub 2017 Mar 15.

The aim of the PETMiner software is to reduce the time and monetary cost of analysing petrophysical data that is obtained from reservoir sample cores. Analysis of these data requires tacit knowledge to fill 'gaps' so that predictions can...

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Harrison DG, Efford ND, Fisher QJ, et al. PETMiner-A Visual Analysis Tool for Petrophysical Properties of Core Sample Data. IEEE Trans Vis Comput Graph. 2017;24(5):1728-1741doi: 10.1109/TVCG.2017.2682865.
Harrison, D. G., Efford, N. D., Fisher, Q. J., & Ruddle, R. A. (2018). PETMiner-A Visual Analysis Tool for Petrophysical Properties of Core Sample Data. IEEE transactions on visualization and computer graphics, 24(5), 1728-1741. https://doi.org/10.1109/TVCG.2017.2682865
Harrison, Dave Graham, et al. "PETMiner-A Visual Analysis Tool for Petrophysical Properties of Core Sample Data." IEEE transactions on visualization and computer graphics vol. 24,5 (2018): 1728-1741. doi: https://doi.org/10.1109/TVCG.2017.2682865
Harrison DG, Efford ND, Fisher QJ, Ruddle RA. PETMiner-A Visual Analysis Tool for Petrophysical Properties of Core Sample Data. IEEE Trans Vis Comput Graph. 2018 May;24(5):1728-1741. doi: 10.1109/TVCG.2017.2682865. Epub 2017 Mar 15. PMID: 28320668.
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Showing 1 to 12 of 529 entries