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The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data.

Glycobiology

Liu Y, McBride R, Stoll M, Palma AS, Silva L, Agravat S, Aoki-Kinoshita KF, Campbell MP, Costello CE, Dell A, Haslam SM, Karlsson NG, Khoo KH, Kolarich D, Novotny MV, Packer NH, Ranzinger R, Rapp E, Rudd PM, Struwe WB, Tiemeyer M, Wells L, York WS, Zaia J, Kettner C, Paulson JC, Feizi T, Smith DF.
PMID: 27993942
Glycobiology. 2017 Apr;27(4):280-284. doi: 10.1093/glycob/cww118. Epub 2016 Nov 22.

MIRAGE (Minimum Information Required for A Glycomics Experiment) is an initiative that was created by experts in the fields of glycobiology, glycoanalytics and glycoinformatics to produce guidelines for reporting results from the diverse types of experiments and analyses used...

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Liu Y, McBride R, Stoll M, et al. The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data. Glycobiology. 2016;27(4):280-284doi: 10.1093/glycob/cww118.
Liu, Y., McBride, R., Stoll, M., Palma, A. S., Silva, L., Agravat, S., Aoki-Kinoshita, K. F., Campbell, M. P., Costello, C. E., Dell, A., Haslam, S. M., Karlsson, N. G., Khoo, K. H., Kolarich, D., Novotny, M. V., Packer, N. H., Ranzinger, R., Rapp, E., Rudd, P. M., Struwe, W. B., Tiemeyer, M., Wells, L., York, W. S., Zaia, J., Kettner, C., Paulson, J. C., Feizi, T., & Smith, D. F. (2017). The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data. Glycobiology, 27(4), 280-284. https://doi.org/10.1093/glycob/cww118
Liu, Yan, et al. "The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data." Glycobiology vol. 27,4 (2017): 280-284. doi: https://doi.org/10.1093/glycob/cww118
Liu Y, McBride R, Stoll M, Palma AS, Silva L, Agravat S, Aoki-Kinoshita KF, Campbell MP, Costello CE, Dell A, Haslam SM, Karlsson NG, Khoo KH, Kolarich D, Novotny MV, Packer NH, Ranzinger R, Rapp E, Rudd PM, Struwe WB, Tiemeyer M, Wells L, York WS, Zaia J, Kettner C, Paulson JC, Feizi T, Smith DF. The minimum information required for a glycomics experiment (MIRAGE) project: improving the standards for reporting glycan microarray-based data. Glycobiology. 2017 Apr;27(4):280-284. doi: 10.1093/glycob/cww118. Epub 2016 Nov 22. PMID: 27993942; PMCID: PMC5444268.
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Erratum: Epithelial-specific A2B adenosine receptor signaling protects the colonic epithelial barrier during acute colitis.

Mucosal immunology

Aherne CM, Saeedi B, Collins CB, Masterson JC, McNamee EN, Perrenoud L, Rapp CR, Curtis VF, Bayless A, Fletcher A, Glover LE, Evans CM, Jedlicka P, Furuta GT, de Zoeten EF, Colgan SP, Eltzschig HK.
PMID: 25943416
Mucosal Immunol. 2015 May;8(3):699. doi: 10.1038/mi.2015.41.

No abstract available.

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Aherne CM, Saeedi B, Collins CB, et al. Erratum: Epithelial-specific A2B adenosine receptor signaling protects the colonic epithelial barrier during acute colitis. Mucosal Immunol. 2015;8(3):699doi: 10.1038/mi.2015.41.
Aherne, C. M., Saeedi, B., Collins, C. B., Masterson, J. C., McNamee, E. N., Perrenoud, L., Rapp, C. R., Curtis, V. F., Bayless, A., Fletcher, A., Glover, L. E., Evans, C. M., Jedlicka, P., Furuta, G. T., de Zoeten, E. F., Colgan, S. P., & Eltzschig, H. K. (2015). Erratum: Epithelial-specific A2B adenosine receptor signaling protects the colonic epithelial barrier during acute colitis. Mucosal immunology, 8(3), 699. https://doi.org/10.1038/mi.2015.41
Aherne, C M, et al. "Erratum: Epithelial-specific A2B adenosine receptor signaling protects the colonic epithelial barrier during acute colitis." Mucosal immunology vol. 8,3 (2015): 699. doi: https://doi.org/10.1038/mi.2015.41
Aherne CM, Saeedi B, Collins CB, Masterson JC, McNamee EN, Perrenoud L, Rapp CR, Curtis VF, Bayless A, Fletcher A, Glover LE, Evans CM, Jedlicka P, Furuta GT, de Zoeten EF, Colgan SP, Eltzschig HK. Erratum: Epithelial-specific A2B adenosine receptor signaling protects the colonic epithelial barrier during acute colitis. Mucosal Immunol. 2015 May;8(3):699. doi: 10.1038/mi.2015.41. PMID: 25943416.
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Predictors of Neurocognitive Syndromes in Combat Veterans.

Cureus

Roy MJ, Costanzo M, Gill J, Leaman S, Law W, Ndiongue R, Taylor P, Kim HS, Bieler GS, Garge N, Rapp PE, Keyser D, Nathan D, Xydakis M, Pham D, Wassermann E.
PMID: 26251769
Cureus. 2015 Jul 30;7(7):e293. doi: 10.7759/cureus.293. eCollection 2015 Jul.

Traumatic brain injury, depression and posttraumatic stress disorder (PTSD) are neurocognitive syndromes often associated with impairment of physical and mental health, as well as functional status. These syndromes are also frequent in military service members (SMs) after combat, although...

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Roy MJ, Costanzo M, Gill J, et al. Predictors of Neurocognitive Syndromes in Combat Veterans. Cureus. 2015;7(7):e293doi: 10.7759/cureus.293.
Roy, M. J., Costanzo, M., Gill, J., Leaman, S., Law, W., Ndiongue, R., Taylor, P., Kim, H. S., Bieler, G. S., Garge, N., Rapp, P. E., Keyser, D., Nathan, D., Xydakis, M., Pham, D., & Wassermann, E. (2015). Predictors of Neurocognitive Syndromes in Combat Veterans. Cureus, 7(7), e293. https://doi.org/10.7759/cureus.293
Roy, Michael J, et al. "Predictors of Neurocognitive Syndromes in Combat Veterans." Cureus vol. 7,7 (2015): e293. doi: https://doi.org/10.7759/cureus.293
Roy MJ, Costanzo M, Gill J, Leaman S, Law W, Ndiongue R, Taylor P, Kim HS, Bieler GS, Garge N, Rapp PE, Keyser D, Nathan D, Xydakis M, Pham D, Wassermann E. Predictors of Neurocognitive Syndromes in Combat Veterans. Cureus. 2015 Jul 30;7(7):e293. doi: 10.7759/cureus.293. eCollection 2015 Jul. PMID: 26251769; PMCID: PMC4524772.
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Effective normalization of complexity measurements for epoch length and sampling frequency.

Physical review. E, Statistical, nonlinear, and soft matter physics

Rapp PE, Cellucci CJ, Korslund KE, Watanabe TA, Jiménez-Montaño MA.
PMID: 11461369
Phys Rev E Stat Nonlin Soft Matter Phys. 2001 Jul;64(1):016209. doi: 10.1103/PhysRevE.64.016209. Epub 2001 Jun 14.

The algorithmic complexity of a symbol sequence is sensitive to the length of the message. Additionally, in those cases where the sequence is constructed by the symbolic reduction of an experimentally observed wave form, the corresponding value of algorithmic...

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Rapp PE, Cellucci CJ, Korslund KE, et al. Effective normalization of complexity measurements for epoch length and sampling frequency. Phys Rev E Stat Nonlin Soft Matter Phys. 2001;64(1):016209doi: 10.1103/PhysRevE.64.016209.
Rapp, P. E., Cellucci, C. J., Korslund, K. E., Watanabe, T. A., & Jiménez-Montaño, M. A. (2001). Effective normalization of complexity measurements for epoch length and sampling frequency. Physical review. E, Statistical, nonlinear, and soft matter physics, 64(1), 016209. https://doi.org/10.1103/PhysRevE.64.016209
Rapp, P E, et al. "Effective normalization of complexity measurements for epoch length and sampling frequency." Physical review. E, Statistical, nonlinear, and soft matter physics vol. 64,1 (2001): 016209. doi: https://doi.org/10.1103/PhysRevE.64.016209
Rapp PE, Cellucci CJ, Korslund KE, Watanabe TA, Jiménez-Montaño MA. Effective normalization of complexity measurements for epoch length and sampling frequency. Phys Rev E Stat Nonlin Soft Matter Phys. 2001 Jul;64(1):016209. doi: 10.1103/PhysRevE.64.016209. Epub 2001 Jun 14. PMID: 11461369.
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Quantitative characterization of animal behavior following blast exposure.

Cognitive neurodynamics

Rapp PE.
PMID: 19003499
Cogn Neurodyn. 2007 Dec;1(4):287-93. doi: 10.1007/s11571-007-9027-8. Epub 2007 Oct 16.

The simplest approach to quantifying animal behavior begins by identifying a list of discrete behaviors and observing the animal's behavior at regular intervals for a specified period of time. The behavioral distribution (the fraction of observations corresponding to each...

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Rapp PE. Quantitative characterization of animal behavior following blast exposure. Cogn Neurodyn. 2007;1(4):287-93doi: 10.1007/s11571-007-9027-8.
Rapp, P. E. (2007). Quantitative characterization of animal behavior following blast exposure. Cognitive neurodynamics, 1(4), 287-93. https://doi.org/10.1007/s11571-007-9027-8
Rapp, Paul Ernest. "Quantitative characterization of animal behavior following blast exposure." Cognitive neurodynamics vol. 1,4 (2007): 287-93. doi: https://doi.org/10.1007/s11571-007-9027-8
Rapp PE. Quantitative characterization of animal behavior following blast exposure. Cogn Neurodyn. 2007 Dec;1(4):287-93. doi: 10.1007/s11571-007-9027-8. Epub 2007 Oct 16. PMID: 19003499; PMCID: PMC2289045.
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Science Planks and Party Platforms.

Science (New York, N.Y.)

Lapp RE.
PMID: 17753133
Science. 1964 Jan 17;143(3603):195. doi: 10.1126/science.143.3603.195.

No abstract available.

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Lapp RE. Science Planks and Party Platforms. Science. 1964;143(3603):195doi: 10.1126/science.143.3603.195.
Lapp, R. E. (1964). Science Planks and Party Platforms. Science (New York, N.Y.), 143(3603), 195. https://doi.org/10.1126/science.143.3603.195
Lapp, R E. "Science Planks and Party Platforms." Science (New York, N.Y.) vol. 143,3603 (1964): 195. doi: https://doi.org/10.1126/science.143.3603.195
Lapp RE. Science Planks and Party Platforms. Science. 1964 Jan 17;143(3603):195. doi: 10.1126/science.143.3603.195. PMID: 17753133.
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Comparative study of embedding methods.

Physical review. E, Statistical, nonlinear, and soft matter physics

Cellucci CJ, Albano AM, Rapp PE.
PMID: 16241329
Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Jun;67(6):066210. doi: 10.1103/PhysRevE.67.066210. Epub 2003 Jun 23.

Embedding experimental data is a common first step in many forms of dynamical analysis. The choice of appropriate embedding parameters (dimension and lag) is crucial to the success of the subsequent analysis. We argue here that the optimal embedding...

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Cellucci CJ, Albano AM, Rapp PE. Comparative study of embedding methods. Phys Rev E Stat Nonlin Soft Matter Phys. 2003;67(6):066210doi: 10.1103/PhysRevE.67.066210.
Cellucci, C. J., Albano, A. M., & Rapp, P. E. (2003). Comparative study of embedding methods. Physical review. E, Statistical, nonlinear, and soft matter physics, 67(6), 066210. https://doi.org/10.1103/PhysRevE.67.066210
Cellucci, C J, et al. "Comparative study of embedding methods." Physical review. E, Statistical, nonlinear, and soft matter physics vol. 67,6 (2003): 066210. doi: https://doi.org/10.1103/PhysRevE.67.066210
Cellucci CJ, Albano AM, Rapp PE. Comparative study of embedding methods. Phys Rev E Stat Nonlin Soft Matter Phys. 2003 Jun;67(6):066210. doi: 10.1103/PhysRevE.67.066210. Epub 2003 Jun 23. PMID: 16241329.
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Cellulose degradation and monitoring of viscosity decrease in cultures of Cellulomonas uda grown on printed newspaper.

Biotechnology and bioengineering

Rapp P, Reng H, Hempel DC, Wagner F.
PMID: 18551634
Biotechnol Bioeng. 1984 Oct;26(10):1167-75. doi: 10.1002/bit.260261005.

The rheological behavior of cultures of Cellulomonas uda with shredded printed newspaper as the carbon source was studied. The initial substrate concentrations ranged from 23 to 60 g/L. The changes in apparent viscosity were followed on-line by applying a...

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Rapp P, Reng H, Hempel DC, et al. Cellulose degradation and monitoring of viscosity decrease in cultures of Cellulomonas uda grown on printed newspaper. Biotechnol Bioeng. 1984;26(10):1167-75doi: 10.1002/bit.260261005.
Rapp, P., Reng, H., Hempel, D. C., & Wagner, F. (1984). Cellulose degradation and monitoring of viscosity decrease in cultures of Cellulomonas uda grown on printed newspaper. Biotechnology and bioengineering, 26(10), 1167-75. https://doi.org/10.1002/bit.260261005
Rapp, P, et al. "Cellulose degradation and monitoring of viscosity decrease in cultures of Cellulomonas uda grown on printed newspaper." Biotechnology and bioengineering vol. 26,10 (1984): 1167-75. doi: https://doi.org/10.1002/bit.260261005
Rapp P, Reng H, Hempel DC, Wagner F. Cellulose degradation and monitoring of viscosity decrease in cultures of Cellulomonas uda grown on printed newspaper. Biotechnol Bioeng. 1984 Oct;26(10):1167-75. doi: 10.1002/bit.260261005. PMID: 18551634.
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Canadian Aeronautics and Space Institute (B3).

Science (New York, N.Y.)

Lapp PA.
PMID: 17793576
Science. 1965 Feb 19;147(3660):920-1. doi: 10.1126/science.147.3660.920-b.

No abstract available.

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Lapp PA. Canadian Aeronautics and Space Institute (B3). Science. 1965;147(3660):920-1doi: 10.1126/science.147.3660.920-b.
Lapp, P. A. (1965). Canadian Aeronautics and Space Institute (B3). Science (New York, N.Y.), 147(3660), 920-1. https://doi.org/10.1126/science.147.3660.920-b
Lapp, P A. "Canadian Aeronautics and Space Institute (B3)." Science (New York, N.Y.) vol. 147,3660 (1965): 920-1. doi: https://doi.org/10.1126/science.147.3660.920-b
Lapp PA. Canadian Aeronautics and Space Institute (B3). Science. 1965 Feb 19;147(3660):920-1. doi: 10.1126/science.147.3660.920-b. PMID: 17793576.
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Searching for a needle in a stack of needles: challenges in metaproteomics data analysis.

Molecular bioSystems

Muth T, Benndorf D, Reichl U, Rapp E, Martens L.
PMID: 23238088
Mol Biosyst. 2013 Apr 05;9(4):578-85. doi: 10.1039/c2mb25415h.

In the past years the integral study of microbial communities of varying complexity has gained increasing research interest. Mass spectrometry-driven metaproteomics enables the analysis of such communities on the functional level, but this fledgling field still faces various technical...

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Muth T, Benndorf D, Reichl U, et al. Searching for a needle in a stack of needles: challenges in metaproteomics data analysis. Mol Biosyst. 2013;9(4):578-85doi: 10.1039/c2mb25415h.
Muth, T., Benndorf, D., Reichl, U., Rapp, E., & Martens, L. (2013). Searching for a needle in a stack of needles: challenges in metaproteomics data analysis. Molecular bioSystems, 9(4), 578-85. https://doi.org/10.1039/c2mb25415h
Muth, Thilo, et al. "Searching for a needle in a stack of needles: challenges in metaproteomics data analysis." Molecular bioSystems vol. 9,4 (2013): 578-85. doi: https://doi.org/10.1039/c2mb25415h
Muth T, Benndorf D, Reichl U, Rapp E, Martens L. Searching for a needle in a stack of needles: challenges in metaproteomics data analysis. Mol Biosyst. 2013 Apr 05;9(4):578-85. doi: 10.1039/c2mb25415h. PMID: 23238088.
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Low-temperature magnetic and transport properties of single-crystal CeCoGe.

Journal of physics. Condensed matter : an Institute of Physics journal

Elmassalami M, Rapp RE, Sinnecker JP, Andreev AV, Prokleska J.
PMID: 21693861
J Phys Condens Matter. 2008 Nov 19;20(46):465223. doi: 10.1088/0953-8984/20/46/465223. Epub 2008 Oct 27.

The low-temperature properties of single-crystal CeCoGe were investigated by specific heat C(T,H), magnetoresistivity ρ(T,H), and differential susceptibility measurements χ(T,H). The zero-field low-temperature specific heat evolves as C = γT+βT(3) = 42T+23.5T(3) mJ mol(-1) K(-1). On comparing its γ =...

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Elmassalami M, Rapp RE, Sinnecker JP, et al. Low-temperature magnetic and transport properties of single-crystal CeCoGe. J Phys Condens Matter. 2008;20(46):465223doi: 10.1088/0953-8984/20/46/465223.
Elmassalami, M., Rapp, R. E., Sinnecker, J. P., Andreev, A. V., & Prokleska, J. (2008). Low-temperature magnetic and transport properties of single-crystal CeCoGe. Journal of physics. Condensed matter : an Institute of Physics journal, 20(46), 465223. https://doi.org/10.1088/0953-8984/20/46/465223
Elmassalami, M, et al. "Low-temperature magnetic and transport properties of single-crystal CeCoGe." Journal of physics. Condensed matter : an Institute of Physics journal vol. 20,46 (2008): 465223. doi: https://doi.org/10.1088/0953-8984/20/46/465223
Elmassalami M, Rapp RE, Sinnecker JP, Andreev AV, Prokleska J. Low-temperature magnetic and transport properties of single-crystal CeCoGe. J Phys Condens Matter. 2008 Nov 19;20(46):465223. doi: 10.1088/0953-8984/20/46/465223. Epub 2008 Oct 27. PMID: 21693861.
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Rapid bonding of polydimethylsiloxane to stereolithographically manufactured epoxy components using a photogenerated intermediary layer.

Lab on a chip

Wilhelm E, Neumann C, Sachsenheimer K, Schmitt T, Länge K, Rapp BE.
PMID: 23645317
Lab Chip. 2013 Jun 21;13(12):2268-71. doi: 10.1039/c3lc50341k. Epub 2013 May 03.

We describe a low cost, photo-induced, room-temperature bonding technique for bonding epoxy components to flexible PDMS membranes in less than half an hour. Bond strengths (~350 kPa) were characterized by ISO-conform tensile testing for a popular stereolithography resin and...

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Wilhelm E, Neumann C, Sachsenheimer K, et al. Rapid bonding of polydimethylsiloxane to stereolithographically manufactured epoxy components using a photogenerated intermediary layer. Lab Chip. 2013;13(12):2268-71doi: 10.1039/c3lc50341k.
Wilhelm, E., Neumann, C., Sachsenheimer, K., Schmitt, T., Länge, K., & Rapp, B. E. (2013). Rapid bonding of polydimethylsiloxane to stereolithographically manufactured epoxy components using a photogenerated intermediary layer. Lab on a chip, 13(12), 2268-71. https://doi.org/10.1039/c3lc50341k
Wilhelm, Elisabeth, et al. "Rapid bonding of polydimethylsiloxane to stereolithographically manufactured epoxy components using a photogenerated intermediary layer." Lab on a chip vol. 13,12 (2013): 2268-71. doi: https://doi.org/10.1039/c3lc50341k
Wilhelm E, Neumann C, Sachsenheimer K, Schmitt T, Länge K, Rapp BE. Rapid bonding of polydimethylsiloxane to stereolithographically manufactured epoxy components using a photogenerated intermediary layer. Lab Chip. 2013 Jun 21;13(12):2268-71. doi: 10.1039/c3lc50341k. Epub 2013 May 03. PMID: 23645317.
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Showing 1 to 12 of 201 entries