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The development and application of bioinformatics core competencies to improve bioinformatics training and education

Undergraduate training programs

Brazas MD, Schwartz R.
GSID: 8NQYRHW4ozsJ
N Mulder, R Schwartz, MD Brazas… - PLoS computational …, 2018 - journals.plos.org

… face a special challenge compared with more traditional degree programs, in that the lack of clear standards for training at the undergraduate level means that there is little one can …

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Mulder, N., Schwartz, R., Brazas, M. D., Brooksbank, C., Gaeta, B., Morgan, S. L., ... & Welch, L. (2018). The development and application of bioinformatics core competencies to improve bioinformatics training and education. PLoS computational biology, 14(2), e1005772.
Mulder, Nicola, et al. "The development and application of bioinformatics core competencies to improve bioinformatics training and education." PLoS computational biology 14.2 (2018): e1005772.
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The reversal of the gender gap in education and its consequences for family life

ADVANCE: Organizational Change for Gender Equity in STEM Academic Professions AND Program Evaluation

Schwartz CR, Van J.
GSID: R2sP0Mf_pP0J
J Van Bavel, CR Schwartz… - Annual Review of …, 2018 - annualreviews.org

Although men tended to receive more education than women in the past, the gender gap in education has reversed in recent decades in most Western and many non-Western countries. We review the literature about the implications for union formation,...

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Van Bavel, J., Schwartz, C. R., & Esteve, A. (2018). The reversal of the gender gap in education and its consequences for family life. Annual Review of Sociology, 44, 341-360.
Van Bavel, Jan, Christine R. Schwartz, and Albert Esteve. "The reversal of the gender gap in education and its consequences for family life." Annual Review of Sociology 44 (2018): 341-360.
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We don't get any training: The impact of a professional development model on teaching practices of chemistry and biology graduate teaching assistants

Graduate training programs

Schwartz R.
GSID: 9qyt9UM_OJEJ
JM Mutambuki, R Schwartz - Chemistry Education Research and …, 2018 - pubs.rsc.org

… Interestingly, a few graduate programs concern themselves with providing the kinds of experiences necessary for science GTAs to develop the knowledge and skills they require to …

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Mutambuki, J. M., & Schwartz, R. (2018). We don’t get any training: The impact of a professional development model on teaching practices of chemistry and biology graduate teaching assistants. Chemistry Education Research and Practice, 19(1), 106-121.
Mutambuki, Jacinta M., and Renee Schwartz. "We don’t get any training: The impact of a professional development model on teaching practices of chemistry and biology graduate teaching assistants." Chemistry Education Research and Practice 19.1 (2018): 106-121.
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“You could like science and not be a science person”: Black girls' negotiation of space and identity in science

Science and underrepresentation

King NS, Schwartz R, Wade‐Jaimes K.
GSID: 32sOm9mH0C4J
K Wade‐Jaimes, NS King, R Schwartz - Science Education, 2021 - Wiley Online Library

… underrepresentation of women of color in science fields, this paper presents case studies of Black middle school girls to examine how their science … in school (science classroom) and …

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Wade‐Jaimes, K., King, N. S., & Schwartz, R. (2021). “You could like science and not be a science person”: Black girls' negotiation of space and identity in science. Science Education, 105(5), 855-879.
Wade‐Jaimes, Katherine, Natalie S. King, and Reneé Schwartz. "“You could like science and not be a science person”: Black girls' negotiation of space and identity in science." Science Education 105.5 (2021): 855-879.
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Mentoring new and early-stage investigators and underrepresented minority faculty for research success in health-related fields: An integrative literature review (2010 …

Centers of Research Excellence in Science and Technology (CREST) and HBCU Research Infrastructure for Science and Engineering (RISE) AND Program Evaluation

Lane TS, Ransdell LB, Schwartz AL.
GSID: NOZcL_GC58MJ
LB Ransdell, TS Lane, AL Schwartz… - … Research and Public …, 2021 - mdpi.com

Mentoring to develop research skills is an important strategy for facilitating faculty success. The purpose of this study was to conduct an integrative literature review to examine the barriers and facilitators to mentoring in health-related research, particularly for three...

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Ransdell, L. B., Lane, T. S., Schwartz, A. L., Wayment, H. A., & Baldwin, J. A. (2021). Mentoring new and early-stage investigators and underrepresented minority faculty for research success in health-related fields: An integrative literature review (2010–2020). International Journal of Environmental Research and Public Health, 18(2), 432.
Ransdell, Lynda B., et al. "Mentoring new and early-stage investigators and underrepresented minority faculty for research success in health-related fields: An integrative literature review (2010–2020)." International Journal of Environmental Research and Public Health 18.2 (2021): 432.
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Steps leading to a PRIMEX program.

ANA clinical sessions

Schwartz DR.
PMID: 4490716
ANA Clin Sess. 1972;50-4.

No abstract available.

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Schwartz DR. Steps leading to a PRIMEX program. ANA Clin Sess. 1972;50-4
Schwartz, D. R. (1972). Steps leading to a PRIMEX program. ANA clinical sessions, 50-4.
Schwartz, D R. "Steps leading to a PRIMEX program." ANA clinical sessions vol. (1972): 50-4.
Schwartz DR. Steps leading to a PRIMEX program. ANA Clin Sess. 1972;50-4. PMID: 4490716.
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Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee).

PLoS computational biology

Welch L, Brooksbank C, Schwartz R, Morgan SL, Gaeta B, Kilpatrick AM, Mietchen D, Moore BL, Mulder N, Pauley M, Pearson W, Radivojac P, Rosenberg N, Rosenwald A, Rustici G, Warnow T.
PMID: 27175996
PLoS Comput Biol. 2016 May 13;12(5):e1004943. doi: 10.1371/journal.pcbi.1004943. eCollection 2016 May.

No abstract available.

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Welch L, Brooksbank C, Schwartz R, et al. Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). PLoS Comput Biol. 2016;12(5):e1004943doi: 10.1371/journal.pcbi.1004943.
Welch, L., Brooksbank, C., Schwartz, R., Morgan, S. L., Gaeta, B., Kilpatrick, A. M., Mietchen, D., Moore, B. L., Mulder, N., Pauley, M., Pearson, W., Radivojac, P., Rosenberg, N., Rosenwald, A., Rustici, G., & Warnow, T. (2016). Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). PLoS computational biology, 12(5), e1004943. https://doi.org/10.1371/journal.pcbi.1004943
Welch, Lonnie, et al. "Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee)." PLoS computational biology vol. 12,5 (2016): e1004943. doi: https://doi.org/10.1371/journal.pcbi.1004943
Welch L, Brooksbank C, Schwartz R, Morgan SL, Gaeta B, Kilpatrick AM, Mietchen D, Moore BL, Mulder N, Pauley M, Pearson W, Radivojac P, Rosenberg N, Rosenwald A, Rustici G, Warnow T. Applying, Evaluating and Refining Bioinformatics Core Competencies (An Update from the Curriculum Task Force of ISCB's Education Committee). PLoS Comput Biol. 2016 May 13;12(5):e1004943. doi: 10.1371/journal.pcbi.1004943. eCollection 2016 May. PMID: 27175996; PMCID: PMC4866758.
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Association between Hypophosphatemia and Cardiac Arrhythmias in the Early Stage of Sepsis: Could Phosphorus Replacement Treatment Reduce the Incidence of Arrhythmias?.

Electrolyte & blood pressure : E & BP

Schwartz A, Brotfain E, Koyfman L, Kutz R, Gruenbaum SE, Klein M, Zlotnik A.
PMID: 25061469
Electrolyte Blood Press. 2014 Jun;12(1):19-25. doi: 10.5049/EBP.2014.12.1.19. Epub 2014 Jun 30.

It is well known that new-onset arrhythmias are common in septic patients. It is thought that hypophosphatemia in the early stages of sepsis may contribute to the development of new arrhythmias. In this study, we hypothesized that intravenous (IV)...

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Schwartz A, Brotfain E, Koyfman L, et al. Association between Hypophosphatemia and Cardiac Arrhythmias in the Early Stage of Sepsis: Could Phosphorus Replacement Treatment Reduce the Incidence of Arrhythmias?. Electrolyte Blood Press. 2014;12(1):19-25doi: 10.5049/EBP.2014.12.1.19.
Schwartz, A., Brotfain, E., Koyfman, L., Kutz, R., Gruenbaum, S. E., Klein, M., & Zlotnik, A. (2014). Association between Hypophosphatemia and Cardiac Arrhythmias in the Early Stage of Sepsis: Could Phosphorus Replacement Treatment Reduce the Incidence of Arrhythmias?. Electrolyte & blood pressure : E & BP, 12(1), 19-25. https://doi.org/10.5049/EBP.2014.12.1.19
Schwartz, Andrei, et al. "Association between Hypophosphatemia and Cardiac Arrhythmias in the Early Stage of Sepsis: Could Phosphorus Replacement Treatment Reduce the Incidence of Arrhythmias?." Electrolyte & blood pressure : E & BP vol. 12,1 (2014): 19-25. doi: https://doi.org/10.5049/EBP.2014.12.1.19
Schwartz A, Brotfain E, Koyfman L, Kutz R, Gruenbaum SE, Klein M, Zlotnik A. Association between Hypophosphatemia and Cardiac Arrhythmias in the Early Stage of Sepsis: Could Phosphorus Replacement Treatment Reduce the Incidence of Arrhythmias?. Electrolyte Blood Press. 2014 Jun;12(1):19-25. doi: 10.5049/EBP.2014.12.1.19. Epub 2014 Jun 30. PMID: 25061469; PMCID: PMC4105385.
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In Reply.

Obstetrics and gynecology

Hicks-Courant K, Schwartz AL.
PMID: 27333350
Obstet Gynecol. 2016 Jul;128(1):207-208. doi: 10.1097/AOG.0000000000001502.

No abstract available.

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Hicks-Courant K, Schwartz AL. In Reply. Obstet Gynecol. 2016;128(1):207-208doi: 10.1097/AOG.0000000000001502.
Hicks-Courant, K., & Schwartz, A. L. (2016). In Reply. Obstetrics and gynecology, 128(1), 207-208. https://doi.org/10.1097/AOG.0000000000001502
Hicks-Courant, Katherine, and Schwartz, Aaron L. "In Reply." Obstetrics and gynecology vol. 128,1 (2016): 207-208. doi: https://doi.org/10.1097/AOG.0000000000001502
Hicks-Courant K, Schwartz AL. In Reply. Obstet Gynecol. 2016 Jul;128(1):207-208. doi: 10.1097/AOG.0000000000001502. PMID: 27333350.
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The Development of .

Frontiers in immunology

Boyle MJ, Jagannathan P, Bowen K, McIntyre TI, Vance HM, Farrington LA, Schwartz A, Nankya F, Naluwu K, Wamala S, Sikyomu E, Rek J, Greenhouse B, Arinaitwe E, Dorsey G, Kamya MR, Feeney ME.
PMID: 29097996
Front Immunol. 2017 Oct 19;8:1329. doi: 10.3389/fimmu.2017.01329. eCollection 2017.

Cytokine-producing CD4 T cells have important roles in immunity against

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Boyle MJ, Jagannathan P, Bowen K, et al. The Development of . Front Immunol. 2017;8:1329doi: 10.3389/fimmu.2017.01329.
Boyle, M. J., Jagannathan, P., Bowen, K., McIntyre, T. I., Vance, H. M., Farrington, L. A., Schwartz, A., Nankya, F., Naluwu, K., Wamala, S., Sikyomu, E., Rek, J., Greenhouse, B., Arinaitwe, E., Dorsey, G., Kamya, M. R., & Feeney, M. E. (2017). The Development of . Frontiers in immunology, 81329. https://doi.org/10.3389/fimmu.2017.01329
Boyle, Michelle J, et al. "The Development of ." Frontiers in immunology vol. 8 (2017): 1329. doi: https://doi.org/10.3389/fimmu.2017.01329
Boyle MJ, Jagannathan P, Bowen K, McIntyre TI, Vance HM, Farrington LA, Schwartz A, Nankya F, Naluwu K, Wamala S, Sikyomu E, Rek J, Greenhouse B, Arinaitwe E, Dorsey G, Kamya MR, Feeney ME. The Development of . Front Immunol. 2017 Oct 19;8:1329. doi: 10.3389/fimmu.2017.01329. eCollection 2017. PMID: 29097996; PMCID: PMC5653696.
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Epigenetic alteration by DNA-demethylating treatment restores apoptotic response to glucocorticoids in dexamethasone-resistant human malignant lymphoid cells.

Cancer cell international

Miller AL, Geng C, Golovko G, Sharma M, Schwartz JR, Yan J, Sowers L, Widger WR, Fofanov Y, Vedeckis WV, Thompson EB.
PMID: 24795534
Cancer Cell Int. 2014 Apr 23;14:35. doi: 10.1186/1475-2867-14-35. eCollection 2014.

BACKGROUND: Glucocorticoids (GCs) are often included in the therapy of lymphoid malignancies because they kill several types of malignant lymphoid cells. GCs activate the glucocorticoid receptor (GR), to regulate a complex genetic network, culminating in apoptosis. Normal lymphoblasts and...

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Miller AL, Geng C, Golovko G, et al. Epigenetic alteration by DNA-demethylating treatment restores apoptotic response to glucocorticoids in dexamethasone-resistant human malignant lymphoid cells. Cancer Cell Int. 2014;14:35doi: 10.1186/1475-2867-14-35.
Miller, A. L., Geng, C., Golovko, G., Sharma, M., Schwartz, J. R., Yan, J., Sowers, L., Widger, W. R., Fofanov, Y., Vedeckis, W. V., & Thompson, E. B. (2014). Epigenetic alteration by DNA-demethylating treatment restores apoptotic response to glucocorticoids in dexamethasone-resistant human malignant lymphoid cells. Cancer cell international, 1435. https://doi.org/10.1186/1475-2867-14-35
Miller, Aaron L, et al. "Epigenetic alteration by DNA-demethylating treatment restores apoptotic response to glucocorticoids in dexamethasone-resistant human malignant lymphoid cells." Cancer cell international vol. 14 (2014): 35. doi: https://doi.org/10.1186/1475-2867-14-35
Miller AL, Geng C, Golovko G, Sharma M, Schwartz JR, Yan J, Sowers L, Widger WR, Fofanov Y, Vedeckis WV, Thompson EB. Epigenetic alteration by DNA-demethylating treatment restores apoptotic response to glucocorticoids in dexamethasone-resistant human malignant lymphoid cells. Cancer Cell Int. 2014 Apr 23;14:35. doi: 10.1186/1475-2867-14-35. eCollection 2014. PMID: 24795534; PMCID: PMC4008436.
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Computational biology and bioinformatics.

Bioinformatics (Oxford, England)

Batzoglou S, Schwartz R.
PMID: 24931972
Bioinformatics. 2014 Jun 15;30(12):i1-2. doi: 10.1093/bioinformatics/btu304.

No abstract available.

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Batzoglou S, Schwartz R. Computational biology and bioinformatics. Bioinformatics. 2014;30(12):i1-2doi: 10.1093/bioinformatics/btu304.
Batzoglou, S., & Schwartz, R. (2014). Computational biology and bioinformatics. Bioinformatics (Oxford, England), 30(12), i1-2. https://doi.org/10.1093/bioinformatics/btu304
Batzoglou, Serafim, and Schwartz, Russell. "Computational biology and bioinformatics." Bioinformatics (Oxford, England) vol. 30,12 (2014): i1-2. doi: https://doi.org/10.1093/bioinformatics/btu304
Batzoglou S, Schwartz R. Computational biology and bioinformatics. Bioinformatics. 2014 Jun 15;30(12):i1-2. doi: 10.1093/bioinformatics/btu304. PMID: 24931972; PMCID: PMC4058912.
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Showing 1 to 12 of 888 entries