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Effects of climate on the expression of the urban stream syndrome

EPSCoR Research Infrastructure Improvement Program AND Program Evaluation

Scoggins M, Smucker NJ.
GSID: GEUU_iFm2f8J
RL Hale, M Scoggins, NJ Smucker… - Freshwater …, 2016 - journals.uchicago.edu

Urban streams display many similar symptoms around the world, but awareness is growing that the mechanisms and severity of the symptoms differ among regions. Climate is a key contributor to these differences via: 1) variation in the initial conditions...

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Hale, R. L., Scoggins, M., Smucker, N. J., & Suchy, A. (2016). Effects of climate on the expression of the urban stream syndrome. Freshwater Science, 35(1), 421-428.
Hale, Rebecca L., et al. "Effects of climate on the expression of the urban stream syndrome." Freshwater Science 35.1 (2016): 421-428.
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Point-of-Use Mixing of Influenza H5N1 Vaccine and MF59 Adjuvant for Pandemic Vaccination Preparedness: Antibody Responses and Safety. A Phase 1 Clinical Trial.

Open forum infectious diseases

Mulligan MJ, Bernstein DI, Frey S, Winokur P, Rouphael N, Dickey M, Edupuganti S, Spearman P, Anderson E, Graham I, Noah DL, Mangal B, Kim S, Hill H, Whitaker J, Emery W, Beck A, Stephens K, Hartwell B, Ogilvie M, Rimann N, Osinski E, Destefano E, Gajadhar T, Strudwick A, Pierce K, Lai L, Yue L, Wang D, Ying C, Cline A, Foltz T, Wagner N, Dull G, Pacatte T, Taggart B, Johnson V, Haller L, Looney C, Li S, May M, Myers B, May R, Parker L, Cochran N, Bowen D, Bell M, Scoggins J, Burns A, Stablein C, Wolff M, Jolles B, Leung B, Lambert L, Shorer S, Buchanan W, Murray S, Chang S, Gorman R.
PMID: 25734170
Open Forum Infect Dis. 2014 Nov 18;1(3):ofu102. doi: 10.1093/ofid/ofu102. eCollection 2014 Dec.

BACKGROUND: Avian influenza A/H5N1 has threatened human health for nearly 2 decades. Avian influenza A vaccine without adjuvant is poorly immunogenic. A flexible rapid tactic for mass vaccination will be needed if a pandemic occurs.METHODS: A multicenter, randomized, blinded...

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Mulligan MJ, Bernstein DI, Frey S, et al. Point-of-Use Mixing of Influenza H5N1 Vaccine and MF59 Adjuvant for Pandemic Vaccination Preparedness: Antibody Responses and Safety. A Phase 1 Clinical Trial. Open Forum Infect Dis. 2014;1(3):ofu102doi: 10.1093/ofid/ofu102.
Mulligan, M. J., Bernstein, D. I., Frey, S., Winokur, P., Rouphael, N., Dickey, M., Edupuganti, S., Spearman, P., Anderson, E., Graham, I., Noah, D. L., Mangal, B., Kim, S., Hill, H., Whitaker, J., Emery, W., Beck, A., Stephens, K., Hartwell, B., Ogilvie, M., Rimann, N., Osinski, E., Destefano, E., Gajadhar, T., Strudwick, A., Pierce, K., Lai, L., Yue, L., Wang, D., Ying, C., Cline, A., Foltz, T., Wagner, N., Dull, G., Pacatte, T., Taggart, B., Johnson, V., Haller, L., Looney, C., Li, S., May, M., Myers, B., May, R., Parker, L., Cochran, N., Bowen, D., Bell, M., Scoggins, J., Burns, A., Stablein, C., Wolff, M., Jolles, B., Leung, B., Lambert, L., Shorer, S., Buchanan, W., Murray, S., Chang, S., & Gorman, R. (2014). Point-of-Use Mixing of Influenza H5N1 Vaccine and MF59 Adjuvant for Pandemic Vaccination Preparedness: Antibody Responses and Safety. A Phase 1 Clinical Trial. Open forum infectious diseases, 1(3), ofu102. https://doi.org/10.1093/ofid/ofu102
Mulligan, Mark J, et al. "Point-of-Use Mixing of Influenza H5N1 Vaccine and MF59 Adjuvant for Pandemic Vaccination Preparedness: Antibody Responses and Safety. A Phase 1 Clinical Trial." Open forum infectious diseases vol. 1,3 (2014): ofu102. doi: https://doi.org/10.1093/ofid/ofu102
Mulligan MJ, Bernstein DI, Frey S, Winokur P, Rouphael N, Dickey M, Edupuganti S, Spearman P, Anderson E, Graham I, Noah DL, Mangal B, Kim S, Hill H, Whitaker J, Emery W, Beck A, Stephens K, Hartwell B, Ogilvie M, Rimann N, Osinski E, Destefano E, Gajadhar T, Strudwick A, Pierce K, Lai L, Yue L, Wang D, Ying C, Cline A, Foltz T, Wagner N, Dull G, Pacatte T, Taggart B, Johnson V, Haller L, Looney C, Li S, May M, Myers B, May R, Parker L, Cochran N, Bowen D, Bell M, Scoggins J, Burns A, Stablein C, Wolff M, Jolles B, Leung B, Lambert L, Shorer S, Buchanan W, Murray S, Chang S, Gorman R. Point-of-Use Mixing of Influenza H5N1 Vaccine and MF59 Adjuvant for Pandemic Vaccination Preparedness: Antibody Responses and Safety. A Phase 1 Clinical Trial. Open Forum Infect Dis. 2014 Nov 18;1(3):ofu102. doi: 10.1093/ofid/ofu102. eCollection 2014 Dec. PMID: 25734170; PMCID: PMC4324215.
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Corrigendum: A diverse range of gene products are effectors of the type I interferon antiviral response.

Nature

Schoggins JW, Wilson SJ, Panis M, Murphy MY, Jones CT, Bieniasz P, Rice CM.
PMID: 26153858
Nature. 2015 Sep 03;525(7567):144. doi: 10.1038/nature14554. Epub 2015 Jul 08.

No abstract available.

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Schoggins JW, Wilson SJ, Panis M, et al. Corrigendum: A diverse range of gene products are effectors of the type I interferon antiviral response. Nature. 2015;525(7567):144doi: 10.1038/nature14554.
Schoggins, J. W., Wilson, S. J., Panis, M., Murphy, M. Y., Jones, C. T., Bieniasz, P., & Rice, C. M. (2015). Corrigendum: A diverse range of gene products are effectors of the type I interferon antiviral response. Nature, 525(7567), 144. https://doi.org/10.1038/nature14554
Schoggins, John W, et al. "Corrigendum: A diverse range of gene products are effectors of the type I interferon antiviral response." Nature vol. 525,7567 (2015): 144. doi: https://doi.org/10.1038/nature14554
Schoggins JW, Wilson SJ, Panis M, Murphy MY, Jones CT, Bieniasz P, Rice CM. Corrigendum: A diverse range of gene products are effectors of the type I interferon antiviral response. Nature. 2015 Sep 03;525(7567):144. doi: 10.1038/nature14554. Epub 2015 Jul 08. PMID: 26153858.
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Early acquisition of non-technical skills using a blended approach to simulation-based medical education.

Advances in simulation (London, England)

Coggins A, Desai M, Nguyen K, Moore N.
PMID: 29450013
Adv Simul (Lond). 2017 Aug 14;2:12. doi: 10.1186/s41077-017-0045-2. eCollection 2017.

BACKGROUND: Non-technical skills are emerging as an important component of postgraduate medical education. Between 2013 and 2016, a new blended training program incorporating non-technical skills was introduced at an Australian university affiliated hospital. Program participants were medical officers in...

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Coggins A, Desai M, Nguyen K, et al. Early acquisition of non-technical skills using a blended approach to simulation-based medical education. Adv Simul (Lond). 2017;2:12doi: 10.1186/s41077-017-0045-2.
Coggins, A., Desai, M., Nguyen, K., & Moore, N. (2017). Early acquisition of non-technical skills using a blended approach to simulation-based medical education. Advances in simulation (London, England), 212. https://doi.org/10.1186/s41077-017-0045-2
Coggins, Andrew, et al. "Early acquisition of non-technical skills using a blended approach to simulation-based medical education." Advances in simulation (London, England) vol. 2 (2017): 12. doi: https://doi.org/10.1186/s41077-017-0045-2
Coggins A, Desai M, Nguyen K, Moore N. Early acquisition of non-technical skills using a blended approach to simulation-based medical education. Adv Simul (Lond). 2017 Aug 14;2:12. doi: 10.1186/s41077-017-0045-2. eCollection 2017. PMID: 29450013; PMCID: PMC5806380.
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Derailing Dehydroquinate Synthase by Introducing a Stabilizing Stereoelectronic Effect in a Reaction Intermediate.

The Journal of organic chemistry

Parker EJ, Coggins JR, Abell C.
PMID: 11672011
J Org Chem. 1997 Nov 28;62(24):8582-8585. doi: 10.1021/jo9713060.

No abstract available.

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Parker EJ, Coggins JR, Abell C. Derailing Dehydroquinate Synthase by Introducing a Stabilizing Stereoelectronic Effect in a Reaction Intermediate. J Org Chem. 1997;62(24):8582-8585doi: 10.1021/jo9713060.
Parker, E. J., Coggins, J. R., & Abell, C. (1997). Derailing Dehydroquinate Synthase by Introducing a Stabilizing Stereoelectronic Effect in a Reaction Intermediate. The Journal of organic chemistry, 62(24), 8582-8585. https://doi.org/10.1021/jo9713060
Parker, Emily J., et al. "Derailing Dehydroquinate Synthase by Introducing a Stabilizing Stereoelectronic Effect in a Reaction Intermediate." The Journal of organic chemistry vol. 62,24 (1997): 8582-8585. doi: https://doi.org/10.1021/jo9713060
Parker EJ, Coggins JR, Abell C. Derailing Dehydroquinate Synthase by Introducing a Stabilizing Stereoelectronic Effect in a Reaction Intermediate. J Org Chem. 1997 Nov 28;62(24):8582-8585. doi: 10.1021/jo9713060. PMID: 11672011.
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Developing the protocol for the evaluation of the health foundation's 'engaging with quality initiative' - an emergent approach.

Implementation science : IS

Soper B, Buxton M, Hanney S, Oortwijn W, Scoggins A, Steel N, Ling T.
PMID: 18973650
Implement Sci. 2008 Oct 30;3:46. doi: 10.1186/1748-5908-3-46.

In 2004 a UK charity, The Health Foundation, established the 'Engaging with Quality Initiative' to explore and evaluate the benefits of engaging clinicians in quality improvement in healthcare. Eight projects run by professional bodies or specialist societies were commissioned...

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Soper B, Buxton M, Hanney S, et al. Developing the protocol for the evaluation of the health foundation's 'engaging with quality initiative' - an emergent approach. Implement Sci. 2008;3:46doi: 10.1186/1748-5908-3-46.
Soper, B., Buxton, M., Hanney, S., Oortwijn, W., Scoggins, A., Steel, N., & Ling, T. (2008). Developing the protocol for the evaluation of the health foundation's 'engaging with quality initiative' - an emergent approach. Implementation science : IS, 346. https://doi.org/10.1186/1748-5908-3-46
Soper, Bryony, et al. "Developing the protocol for the evaluation of the health foundation's 'engaging with quality initiative' - an emergent approach." Implementation science : IS vol. 3 (2008): 46. doi: https://doi.org/10.1186/1748-5908-3-46
Soper B, Buxton M, Hanney S, Oortwijn W, Scoggins A, Steel N, Ling T. Developing the protocol for the evaluation of the health foundation's 'engaging with quality initiative' - an emergent approach. Implement Sci. 2008 Oct 30;3:46. doi: 10.1186/1748-5908-3-46. PMID: 18973650; PMCID: PMC2612693.
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Esophageal carcinoma histology affects perioperative morbidity following open esophagogastrectomy.

Journal of oncology

Woodall CE, Duvall R, Scoggins CR, McMasters KM, Martin RC.
PMID: 19277105
J Oncol. 2008;2008:389394. doi: 10.1155/2008/389394. Epub 2009 Feb 05.

Background. Esophagectomy for esophageal cancer is being practiced routinely with favorable results at many centers. We sought to determine if tumor histology is a powerful surrogate marker for perioperative morbidity. Methods. Seventy three consecutive patients managed operatively were reviewed...

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Woodall CE, Duvall R, Scoggins CR, et al. Esophageal carcinoma histology affects perioperative morbidity following open esophagogastrectomy. J Oncol. 2009;2008:389394doi: 10.1155/2008/389394.
Woodall, C. E., Duvall, R., Scoggins, C. R., McMasters, K. M., & Martin, R. C. (2008). Esophageal carcinoma histology affects perioperative morbidity following open esophagogastrectomy. Journal of oncology, 2008389394. https://doi.org/10.1155/2008/389394
Woodall, Charles E, et al. "Esophageal carcinoma histology affects perioperative morbidity following open esophagogastrectomy." Journal of oncology vol. 2008 (2008): 389394. doi: https://doi.org/10.1155/2008/389394
Woodall CE, Duvall R, Scoggins CR, McMasters KM, Martin RC. Esophageal carcinoma histology affects perioperative morbidity following open esophagogastrectomy. J Oncol. 2008;2008:389394. doi: 10.1155/2008/389394. Epub 2009 Feb 05. PMID: 19277105; PMCID: PMC2648642.
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Method for quantifying assessment of contact thermography: effect of extremity dominance on temperature distribution patterns.

The Journal of orthopaedic and sports physical therapy

Gross MT, Schuch CP, Huber E, Scoggins JF, Sullivan SH.
PMID: 18791308
J Orthop Sports Phys Ther. 1989;10(10):412-7. doi: 10.2519/jospt.1989.10.10.412.

This research was supported in part by a Junior Faculty Research Grant from the Department of Medical Allied Health Professions, The University of North Carolina at Chapel Hill. Chapel Hill. NC. The purposes of this project were to evaluate...

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Gross MT, Schuch CP, Huber E, et al. Method for quantifying assessment of contact thermography: effect of extremity dominance on temperature distribution patterns. J Orthop Sports Phys Ther. 1989;10(10):412-7doi: 10.2519/jospt.1989.10.10.412.
Gross, M. T., Schuch, C. P., Huber, E., Scoggins, J. F., & Sullivan, S. H. (1989). Method for quantifying assessment of contact thermography: effect of extremity dominance on temperature distribution patterns. The Journal of orthopaedic and sports physical therapy, 10(10), 412-7. https://doi.org/10.2519/jospt.1989.10.10.412
Gross, M T, et al. "Method for quantifying assessment of contact thermography: effect of extremity dominance on temperature distribution patterns." The Journal of orthopaedic and sports physical therapy vol. 10,10 (1989): 412-7. doi: https://doi.org/10.2519/jospt.1989.10.10.412
Gross MT, Schuch CP, Huber E, Scoggins JF, Sullivan SH. Method for quantifying assessment of contact thermography: effect of extremity dominance on temperature distribution patterns. J Orthop Sports Phys Ther. 1989;10(10):412-7. doi: 10.2519/jospt.1989.10.10.412. PMID: 18791308.
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CSEO - the Cigarette Smoke Exposure Ontology.

Journal of biomedical semantics

Younesi E, Ansari S, Guendel M, Ahmadi S, Coggins C, Hoeng J, Hofmann-Apitius M, Peitsch MC.
PMID: 25093069
J Biomed Semantics. 2014 Jul 10;5:31. doi: 10.1186/2041-1480-5-31. eCollection 2014.

BACKGROUND: In the past years, significant progress has been made to develop and use experimental settings for extensive data collection on tobacco smoke exposure and tobacco smoke exposure-associated diseases. Due to the growing number of such data, there is...

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Younesi E, Ansari S, Guendel M, et al. CSEO - the Cigarette Smoke Exposure Ontology. J Biomed Semantics. 2014;5:31doi: 10.1186/2041-1480-5-31.
Younesi, E., Ansari, S., Guendel, M., Ahmadi, S., Coggins, C., Hoeng, J., Hofmann-Apitius, M., & Peitsch, M. C. (2014). CSEO - the Cigarette Smoke Exposure Ontology. Journal of biomedical semantics, 531. https://doi.org/10.1186/2041-1480-5-31
Younesi, Erfan, et al. "CSEO - the Cigarette Smoke Exposure Ontology." Journal of biomedical semantics vol. 5 (2014): 31. doi: https://doi.org/10.1186/2041-1480-5-31
Younesi E, Ansari S, Guendel M, Ahmadi S, Coggins C, Hoeng J, Hofmann-Apitius M, Peitsch MC. CSEO - the Cigarette Smoke Exposure Ontology. J Biomed Semantics. 2014 Jul 10;5:31. doi: 10.1186/2041-1480-5-31. eCollection 2014. PMID: 25093069; PMCID: PMC4120729.
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A Chemist's Perspective on the Role of Phosphorus at the Origins of Life.

Life (Basel, Switzerland)

Fernández-García C, Coggins AJ, Powner MW.
PMID: 28703763
Life (Basel). 2017 Jul 13;7(3). doi: 10.3390/life7030031.

The central role that phosphates play in biological systems, suggests they also played an important role in the emergence of life on Earth. In recent years, numerous important advances have been made towards understanding the influence that phosphates may...

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Fernández-García C, Coggins AJ, Powner MW. A Chemist's Perspective on the Role of Phosphorus at the Origins of Life. Life (Basel). 2017;7(3)doi: 10.3390/life7030031.
Fernández-García, C., Coggins, A. J., & Powner, M. W. (2017). A Chemist's Perspective on the Role of Phosphorus at the Origins of Life. Life (Basel, Switzerland), 7(3), . https://doi.org/10.3390/life7030031
Fernández-García, Christian, et al. "A Chemist's Perspective on the Role of Phosphorus at the Origins of Life." Life (Basel, Switzerland) vol. 7,3 (2017). doi: https://doi.org/10.3390/life7030031
Fernández-García C, Coggins AJ, Powner MW. A Chemist's Perspective on the Role of Phosphorus at the Origins of Life. Life (Basel). 2017 Jul 13;7(3). doi: 10.3390/life7030031. PMID: 28703763; PMCID: PMC5617956.
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A feasibility study of neoadjuvant talazoparib for operable breast cancer patients with a germline .

NPJ breast cancer

Litton JK, Scoggins M, Ramirez DL, Murthy RK, Whitman GJ, Hess KR, Adrada BE, Moulder SL, Barcenas CH, Valero V, Gomez JS, Mittendorf EA, Thompson A, Helgason T, Mills GB, Piwnica-Worms H, Arun BK.
PMID: 29238749
NPJ Breast Cancer. 2017 Dec 06;3:49. doi: 10.1038/s41523-017-0052-4. eCollection 2017.

This study was undertaken to determine the feasibility of enrolling breast cancer patients on a single-agent-targeted therapy trial before neoadjuvant chemotherapy. Specifically, we evaluated talazoparib in patients harboring a deleterious BRCA mutation (BRCA+). Patients with a germline BRCA mutation...

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Litton JK, Scoggins M, Ramirez DL, et al. A feasibility study of neoadjuvant talazoparib for operable breast cancer patients with a germline . NPJ Breast Cancer. 2017;3:49doi: 10.1038/s41523-017-0052-4.
Litton, J. K., Scoggins, M., Ramirez, D. L., Murthy, R. K., Whitman, G. J., Hess, K. R., Adrada, B. E., Moulder, S. L., Barcenas, C. H., Valero, V., Gomez, J. S., Mittendorf, E. A., Thompson, A., Helgason, T., Mills, G. B., Piwnica-Worms, H., & Arun, B. K. (2017). A feasibility study of neoadjuvant talazoparib for operable breast cancer patients with a germline . NPJ breast cancer, 349. https://doi.org/10.1038/s41523-017-0052-4
Litton, J K, et al. "A feasibility study of neoadjuvant talazoparib for operable breast cancer patients with a germline ." NPJ breast cancer vol. 3 (2017): 49. doi: https://doi.org/10.1038/s41523-017-0052-4
Litton JK, Scoggins M, Ramirez DL, Murthy RK, Whitman GJ, Hess KR, Adrada BE, Moulder SL, Barcenas CH, Valero V, Gomez JS, Mittendorf EA, Thompson A, Helgason T, Mills GB, Piwnica-Worms H, Arun BK. A feasibility study of neoadjuvant talazoparib for operable breast cancer patients with a germline . NPJ Breast Cancer. 2017 Dec 06;3:49. doi: 10.1038/s41523-017-0052-4. eCollection 2017. PMID: 29238749; PMCID: PMC5719044.
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Preventing Futile Liver Resection: A Risk-Based Approach to Surgical Selection in Major Hepatectomy for Colorectal Cancer.

Annals of surgical oncology

Fromer MW, Scoggins CR, Egger ME, Philips P, McMasters KM, Martin Ii RCG.
PMID: 34522997
Ann Surg Oncol. 2022 Feb;29(2):905-912. doi: 10.1245/s10434-021-10761-0. Epub 2021 Sep 14.

BACKGROUND: Early recurrence following liver resection for metastatic colorectal cancer generally portends poor survival. We sought to identify factors associated with early disease recurrence after major hepatectomy for metastatic colorectal cancer in order to improve patient selection and prevent...

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Fromer MW, Scoggins CR, Egger ME, et al. Preventing Futile Liver Resection: A Risk-Based Approach to Surgical Selection in Major Hepatectomy for Colorectal Cancer. Ann Surg Oncol. 2021;29(2):905-912doi: 10.1245/s10434-021-10761-0.
Fromer, M. W., Scoggins, C. R., Egger, M. E., Philips, P., McMasters, K. M., & Martin Ii, R. C. G. (2022). Preventing Futile Liver Resection: A Risk-Based Approach to Surgical Selection in Major Hepatectomy for Colorectal Cancer. Annals of surgical oncology, 29(2), 905-912. https://doi.org/10.1245/s10434-021-10761-0
Fromer, Marc W, et al. "Preventing Futile Liver Resection: A Risk-Based Approach to Surgical Selection in Major Hepatectomy for Colorectal Cancer." Annals of surgical oncology vol. 29,2 (2022): 905-912. doi: https://doi.org/10.1245/s10434-021-10761-0
Fromer MW, Scoggins CR, Egger ME, Philips P, McMasters KM, Martin Ii RCG. Preventing Futile Liver Resection: A Risk-Based Approach to Surgical Selection in Major Hepatectomy for Colorectal Cancer. Ann Surg Oncol. 2022 Feb;29(2):905-912. doi: 10.1245/s10434-021-10761-0. Epub 2021 Sep 14. PMID: 34522997; PMCID: PMC8439367.
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Showing 1 to 12 of 109 entries