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Draft Genome Sequence of the Saccharomyces cerevisiae .

Genome announcements

Lopandic K, Tafer H, Sterflinger K.
PMID: 29773619
Genome Announc. 2018 May 17;6(20). doi: 10.1128/genomeA.00343-18.

No abstract available.

Cite
Lopandic K, Tafer H, Sterflinger K. Draft Genome Sequence of the Saccharomyces cerevisiae . Genome Announc. 2018;6(20)doi: 10.1128/genomeA.00343-18.
Lopandic, K., Tafer, H., & Sterflinger, K. (2018). Draft Genome Sequence of the Saccharomyces cerevisiae . Genome announcements, 6(20), . https://doi.org/10.1128/genomeA.00343-18
Lopandic, Ksenija, et al. "Draft Genome Sequence of the Saccharomyces cerevisiae ." Genome announcements vol. 6,20 (2018). doi: https://doi.org/10.1128/genomeA.00343-18
Lopandic K, Tafer H, Sterflinger K. Draft Genome Sequence of the Saccharomyces cerevisiae . Genome Announc. 2018 May 17;6(20). doi: 10.1128/genomeA.00343-18. PMID: 29773619; PMCID: PMC5958256.
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Shed Light in the DaRk LineagES of the Fungal Tree of Life-STRES.

Life (Basel, Switzerland)

Selbmann L, Benkő Z, Coleine C, de Hoog S, Donati C, Druzhinina I, Emri T, Ettinger CL, Gladfelter AS, Gorbushina AA, Grigoriev IV, Grube M, Gunde-Cimerman N, Karányi ZÁ, Kocsis B, Kubressoian T, Miklós I, Miskei M, Muggia L, Northen T, Novak-Babič M, Pennacchio C, Pfliegler WP, Pòcsi I, Prigione V, Riquelme M, Segata N, Schumacher J, Shelest E, Sterflinger K, Tesei D, U'Ren JM, Varese GC, Vázquez-Campos X, Vicente VA, Souza EM, Zalar P, Walker AK, Stajich JE.
PMID: 33352712
Life (Basel). 2020 Dec 19;10(12). doi: 10.3390/life10120362.

The polyphyletic group of black fungi within the Ascomycota (Arthoniomycetes, Dothideomycetes, and Eurotiomycetes) is ubiquitous in natural and anthropogenic habitats. Partly because of their dark, melanin-based pigmentation, black fungi are resistant to stresses including UV- and ionizing-radiation, heat and...

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Selbmann L, Benkő Z, Coleine C, et al. Shed Light in the DaRk LineagES of the Fungal Tree of Life-STRES. Life (Basel). 2020;10(12)doi: 10.3390/life10120362.
Selbmann, L., Benkő, Z., Coleine, C., de Hoog, S., Donati, C., Druzhinina, I., Emri, T., Ettinger, C. L., Gladfelter, A. S., Gorbushina, A. A., Grigoriev, I. V., Grube, M., Gunde-Cimerman, N., Karányi, Z. �. �., Kocsis, B., Kubressoian, T., Miklós, I., Miskei, M., Muggia, L., Northen, T., Novak-Babič, M., Pennacchio, C., Pfliegler, W. P., Pòcsi, I., Prigione, V., Riquelme, M., Segata, N., Schumacher, J., Shelest, E., Sterflinger, K., Tesei, D., U'Ren, J. M., Varese, G. C., Vázquez-Campos, X., Vicente, V. A., Souza, E. M., Zalar, P., Walker, A. K., & Stajich, J. E. (2020). Shed Light in the DaRk LineagES of the Fungal Tree of Life-STRES. Life (Basel, Switzerland), 10(12), . https://doi.org/10.3390/life10120362
Selbmann, Laura, et al. "Shed Light in the DaRk LineagES of the Fungal Tree of Life-STRES." Life (Basel, Switzerland) vol. 10,12 (2020). doi: https://doi.org/10.3390/life10120362
Selbmann L, Benkő Z, Coleine C, de Hoog S, Donati C, Druzhinina I, Emri T, Ettinger CL, Gladfelter AS, Gorbushina AA, Grigoriev IV, Grube M, Gunde-Cimerman N, Karányi ZÁ, Kocsis B, Kubressoian T, Miklós I, Miskei M, Muggia L, Northen T, Novak-Babič M, Pennacchio C, Pfliegler WP, Pòcsi I, Prigione V, Riquelme M, Segata N, Schumacher J, Shelest E, Sterflinger K, Tesei D, U'Ren JM, Varese GC, Vázquez-Campos X, Vicente VA, Souza EM, Zalar P, Walker AK, Stajich JE. Shed Light in the DaRk LineagES of the Fungal Tree of Life-STRES. Life (Basel). 2020 Dec 19;10(12). doi: 10.3390/life10120362. PMID: 33352712; PMCID: PMC7767062.
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An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota.

Life (Basel, Switzerland)

Muggia L, Ametrano CG, Sterflinger K, Tesei D.
PMID: 33348904
Life (Basel). 2020 Dec 17;10(12). doi: 10.3390/life10120356.

Fungi are among the most successful eukaryotes on Earth: they have evolved strategies to survive in the most diverse environments and stressful conditions and have been selected and exploited for multiple aims by humans. The characteristic features intrinsic of...

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Muggia L, Ametrano CG, Sterflinger K, et al. An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota. Life (Basel). 2020;10(12)doi: 10.3390/life10120356.
Muggia, L., Ametrano, C. G., Sterflinger, K., & Tesei, D. (2020). An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota. Life (Basel, Switzerland), 10(12), . https://doi.org/10.3390/life10120356
Muggia, Lucia, et al. "An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota." Life (Basel, Switzerland) vol. 10,12 (2020). doi: https://doi.org/10.3390/life10120356
Muggia L, Ametrano CG, Sterflinger K, Tesei D. An Overview of Genomics, Phylogenomics and Proteomics Approaches in Ascomycota. Life (Basel). 2020 Dec 17;10(12). doi: 10.3390/life10120356. PMID: 33348904; PMCID: PMC7765829.
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Author Correction: Shotgun proteomics reveals putative polyesterases in the secretome of the rock-inhabiting fungus Knufia chersonesos.

Scientific reports

Tesei D, Quartinello F, Guebitz GM, Ribitsch D, Nöbauer K, Razzazi-Fazeli E, Sterflinger K.
PMID: 33009427
Sci Rep. 2020 Oct 02;10(1):16713. doi: 10.1038/s41598-020-70778-5.

An amendment to this paper has been published and can be accessed via a link at the top of the paper.

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Tesei D, Quartinello F, Guebitz GM, et al. Author Correction: Shotgun proteomics reveals putative polyesterases in the secretome of the rock-inhabiting fungus Knufia chersonesos. Sci Rep. 2020;10(1):16713doi: 10.1038/s41598-020-70778-5.
Tesei, D., Quartinello, F., Guebitz, G. M., Ribitsch, D., Nöbauer, K., Razzazi-Fazeli, E., & Sterflinger, K. (2020). Author Correction: Shotgun proteomics reveals putative polyesterases in the secretome of the rock-inhabiting fungus Knufia chersonesos. Scientific reports, 10(1), 16713. https://doi.org/10.1038/s41598-020-70778-5
Tesei, Donatella, et al. "Author Correction: Shotgun proteomics reveals putative polyesterases in the secretome of the rock-inhabiting fungus Knufia chersonesos." Scientific reports vol. 10,1 (2020): 16713. doi: https://doi.org/10.1038/s41598-020-70778-5
Tesei D, Quartinello F, Guebitz GM, Ribitsch D, Nöbauer K, Razzazi-Fazeli E, Sterflinger K. Author Correction: Shotgun proteomics reveals putative polyesterases in the secretome of the rock-inhabiting fungus Knufia chersonesos. Sci Rep. 2020 Oct 02;10(1):16713. doi: 10.1038/s41598-020-70778-5. PMID: 33009427; PMCID: PMC7532174.
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The emerging pathogen Paecilomyces variotii - a novel and important fungal allergen source.

Allergy

Pfeiffer S, Raith M, Pascal M, Munoz-Cano RM, San Bartolome C, Nöbauer K, Quirce S, Razzazi-Fazeli E, Focke-Tejkl M, Sterflinger K, Swoboda I.
PMID: 34773271
Allergy. 2021 Nov 13; doi: 10.1111/all.15176. Epub 2021 Nov 13.

No abstract available.

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Pfeiffer S, Raith M, Pascal M, et al. The emerging pathogen Paecilomyces variotii - a novel and important fungal allergen source. Allergy. 2021;doi: 10.1111/all.15176.
Pfeiffer, S., Raith, M., Pascal, M., Munoz-Cano, R. M., San Bartolome, C., Nöbauer, K., Quirce, S., Razzazi-Fazeli, E., Focke-Tejkl, M., Sterflinger, K., & Swoboda, I. (2021). The emerging pathogen Paecilomyces variotii - a novel and important fungal allergen source. Allergy, . https://doi.org/10.1111/all.15176
Pfeiffer, Sandra, et al. "The emerging pathogen Paecilomyces variotii - a novel and important fungal allergen source." Allergy vol. (2021). doi: https://doi.org/10.1111/all.15176
Pfeiffer S, Raith M, Pascal M, Munoz-Cano RM, San Bartolome C, Nöbauer K, Quirce S, Razzazi-Fazeli E, Focke-Tejkl M, Sterflinger K, Swoboda I. The emerging pathogen Paecilomyces variotii - a novel and important fungal allergen source. Allergy. 2021 Nov 13; doi: 10.1111/all.15176. Epub 2021 Nov 13. PMID: 34773271.
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Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions.

Data in brief

Tesei D, Marzban G, Marchetti-Deschmann M, Tafer H, Arcalis E, Sterflinger K.
PMID: 26958594
Data Brief. 2015 Sep 02;5:372-5. doi: 10.1016/j.dib.2015.08.008. eCollection 2015 Dec.

In the current study a comparative proteomic approach was used to investigate the response of the human pathogen black yeast Exophiala dermatitidis toward temperature treatment. Protein functional analysis - based on cellular process GO terms - was performed on...

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Tesei D, Marzban G, Marchetti-Deschmann M, et al. Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions. Data Brief. 2015;5:372-5doi: 10.1016/j.dib.2015.08.008.
Tesei, D., Marzban, G., Marchetti-Deschmann, M., Tafer, H., Arcalis, E., & Sterflinger, K. (2015). Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions. Data in brief, 5372-5. https://doi.org/10.1016/j.dib.2015.08.008
Tesei, Donatella, et al. "Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions." Data in brief vol. 5 (2015): 372-5. doi: https://doi.org/10.1016/j.dib.2015.08.008
Tesei D, Marzban G, Marchetti-Deschmann M, Tafer H, Arcalis E, Sterflinger K. Protein functional analysis data in support of comparative proteomics of the pathogenic black yeast Exophiala dermatitidis under different temperature conditions. Data Brief. 2015 Sep 02;5:372-5. doi: 10.1016/j.dib.2015.08.008. eCollection 2015 Dec. PMID: 26958594; PMCID: PMC4773397.
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Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human Interdigital Mycotic Lesion.

Genome announcements

Tafer H, Sterflinger K, Lopandic K.
PMID: 26847909
Genome Announc. 2016 Feb 04;4(1). doi: 10.1128/genomeA.01580-15.

The yeast genus Debaryomyces comprises species isolated from various natural habitats, man-made environments, and clinical materials. Here, the draft genome of D. fabryi CBS 789(T), isolated from a human interdigital mycotic lesion, is presented.

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Tafer H, Sterflinger K, Lopandic K. Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human Interdigital Mycotic Lesion. Genome Announc. 2016;4(1)doi: 10.1128/genomeA.01580-15.
Tafer, H., Sterflinger, K., & Lopandic, K. (2016). Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human Interdigital Mycotic Lesion. Genome announcements, 4(1), . https://doi.org/10.1128/genomeA.01580-15
Tafer, Hakim, et al. "Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human Interdigital Mycotic Lesion." Genome announcements vol. 4,1 (2016). doi: https://doi.org/10.1128/genomeA.01580-15
Tafer H, Sterflinger K, Lopandic K. Draft Genome of Debaryomyces fabryi CBS 789T, Isolated from a Human Interdigital Mycotic Lesion. Genome Announc. 2016 Feb 04;4(1). doi: 10.1128/genomeA.01580-15. PMID: 26847909; PMCID: PMC4742678.
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Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs.

Life (Basel, Switzerland)

Sterflinger K, Voitl C, Lopandic K, Piñar G, Tafer H.
PMID: 29903995
Life (Basel). 2018 Jun 14;8(2). doi: 10.3390/life8020022.

Recent investigations have shown that xerophilic fungi may pose a biodeterioration risk by threatening objects of cultural heritage including many types of materials, including wood, paint layers, organic glues or leather and even metal. Historic—and also new built—pipe organs...

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Sterflinger K, Voitl C, Lopandic K, et al. Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs. Life (Basel). 2018;8(2)doi: 10.3390/life8020022.
Sterflinger, K., Voitl, C., Lopandic, K., Piñar, G., & Tafer, H. (2018). Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs. Life (Basel, Switzerland), 8(2), . https://doi.org/10.3390/life8020022
Sterflinger, Katja, et al. "Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs." Life (Basel, Switzerland) vol. 8,2 (2018). doi: https://doi.org/10.3390/life8020022
Sterflinger K, Voitl C, Lopandic K, Piñar G, Tafer H. Big Sound and Extreme Fungi-Xerophilic, Halotolerant Aspergilli and Penicillia with Low Optimal Temperature as Invaders of Historic Pipe Organs. Life (Basel). 2018 Jun 14;8(2). doi: 10.3390/life8020022. PMID: 29903995; PMCID: PMC6027336.
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Incidence and Prediction of HBsAg Seroconversion in a Prospective Multi-ethnic HBeAg-Negative Chronic Hepatitis B Cohort.

Hepatology (Baltimore, Md.)

Terrault NA, Wahed AS, Feld JJ, Cooper SL, Ghany MG, Lisker-Melman M, Perrillo R, Sterling RK, Khalili M, Chung RT, Rosenthal P, Fontana RJ, Sarowar A, Lau D, Wang J, Lok AS, Janssen H.
PMID: 34743343
Hepatology. 2021 Nov 07; doi: 10.1002/hep.32231. Epub 2021 Nov 07.

BACKGROUND & AIMS: Achieving HBsAg loss is an important landmark in the natural history of chronic hepatitis B. A more personalized approach to prediction of HBsAg loss is relevant in couseling patients. This study sought to develop and validate...

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Terrault NA, Wahed AS, Feld JJ, et al. Incidence and Prediction of HBsAg Seroconversion in a Prospective Multi-ethnic HBeAg-Negative Chronic Hepatitis B Cohort. Hepatology. 2021;doi: 10.1002/hep.32231.
Terrault, N. A., Wahed, A. S., Feld, J. J., Cooper, S. L., Ghany, M. G., Lisker-Melman, M., Perrillo, R., Sterling, R. K., Khalili, M., Chung, R. T., Rosenthal, P., Fontana, R. J., Sarowar, A., Lau, D., Wang, J., Lok, A. S., & Janssen, H. (2021). Incidence and Prediction of HBsAg Seroconversion in a Prospective Multi-ethnic HBeAg-Negative Chronic Hepatitis B Cohort. Hepatology (Baltimore, Md.), . https://doi.org/10.1002/hep.32231
Terrault, N A, et al. "Incidence and Prediction of HBsAg Seroconversion in a Prospective Multi-ethnic HBeAg-Negative Chronic Hepatitis B Cohort." Hepatology (Baltimore, Md.) vol. (2021). doi: https://doi.org/10.1002/hep.32231
Terrault NA, Wahed AS, Feld JJ, Cooper SL, Ghany MG, Lisker-Melman M, Perrillo R, Sterling RK, Khalili M, Chung RT, Rosenthal P, Fontana RJ, Sarowar A, Lau D, Wang J, Lok AS, Janssen H. Incidence and Prediction of HBsAg Seroconversion in a Prospective Multi-ethnic HBeAg-Negative Chronic Hepatitis B Cohort. Hepatology. 2021 Nov 07; doi: 10.1002/hep.32231. Epub 2021 Nov 07. PMID: 34743343.
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A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations.

Polymers

Pintus V, Szabó F, Noel Tóth D, Wieland K, Csuti P, Anghelone M, Santorelli O, Salvadori C, Haisch C, Sterflinger K, Schreiner M.
PMID: 34960992
Polymers (Basel). 2021 Dec 17;13(24). doi: 10.3390/polym13244441.

This study aims to investigate the chemical stability of some modern paint samples exposed to a new Light Emitting Diode (LED)-lighting system and a halogen lamp by using micro-attenuated total reflectance of Fourier transform infrared spectroscopy (µ-ATR-FTIR), µ-Raman, pyrolysis-gas...

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Pintus V, Szabó F, Noel Tóth D, et al. A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations. Polymers (Basel). 2021;13(24)doi: 10.3390/polym13244441.
Pintus, V., Szabó, F., Noel Tóth, D., Wieland, K., Csuti, P., Anghelone, M., Santorelli, O., Salvadori, C., Haisch, C., Sterflinger, K., & Schreiner, M. (2021). A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations. Polymers, 13(24), . https://doi.org/10.3390/polym13244441
Pintus, Valentina, et al. "A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations." Polymers vol. 13,24 (2021). doi: https://doi.org/10.3390/polym13244441
Pintus V, Szabó F, Noel Tóth D, Wieland K, Csuti P, Anghelone M, Santorelli O, Salvadori C, Haisch C, Sterflinger K, Schreiner M. A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations. Polymers (Basel). 2021 Dec 17;13(24). doi: 10.3390/polym13244441. PMID: 34960992.
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A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations.

Polymers

Pintus V, Szabó F, Noel Tóth D, Wieland K, Csuti P, Anghelone M, Santorelli O, Salvadori C, Haisch C, Sterflinger K, Schreiner M.
PMID: 34960992
Polymers (Basel). 2021 Dec 17;13(24). doi: 10.3390/polym13244441.

This study aims to investigate the chemical stability of some modern paint samples exposed to a new Light Emitting Diode (LED)-lighting system and a halogen lamp by using micro-attenuated total reflectance of Fourier transform infrared spectroscopy (µ-ATR-FTIR), µ-Raman, pyrolysis-gas...

Cite
Pintus V, Szabó F, Noel Tóth D, et al. A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations. Polymers (Basel). 2021;13(24)doi: 10.3390/polym13244441.
Pintus, V., Szabó, F., Noel Tóth, D., Wieland, K., Csuti, P., Anghelone, M., Santorelli, O., Salvadori, C., Haisch, C., Sterflinger, K., & Schreiner, M. (2021). A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations. Polymers, 13(24), . https://doi.org/10.3390/polym13244441
Pintus, Valentina, et al. "A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations." Polymers vol. 13,24 (2021). doi: https://doi.org/10.3390/polym13244441
Pintus V, Szabó F, Noel Tóth D, Wieland K, Csuti P, Anghelone M, Santorelli O, Salvadori C, Haisch C, Sterflinger K, Schreiner M. A Multi-Analytical Approach for Studying the Effect of New LED Lighting Systems on Modern Paints: Chemical Stability Investigations. Polymers (Basel). 2021 Dec 17;13(24). doi: 10.3390/polym13244441. PMID: 34960992; PMCID: PMC8707339.
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Draft Genome of Cladophialophora immunda, a Black Yeast and Efficient Degrader of Polyaromatic Hydrocarbons.

Genome announcements

Sterflinger K, Lopandic K, Blasi B, Poynter C, de Hoog S, Tafer H.
PMID: 25635024
Genome Announc. 2015 Jan 29;3(1). doi: 10.1128/genomeA.01283-14.

The fungal genus Cladophialophora comprises many species which cause severe and even fatal infections in humans as well as environmental strains able to degrade polyaromatic hydrocarbons. The draft genome of Cladophialophora immunda presented here is the first whole-genome sequence...

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Sterflinger K, Lopandic K, Blasi B, et al. Draft Genome of Cladophialophora immunda, a Black Yeast and Efficient Degrader of Polyaromatic Hydrocarbons. Genome Announc. 2015;3(1)doi: 10.1128/genomeA.01283-14.
Sterflinger, K., Lopandic, K., Blasi, B., Poynter, C., de Hoog, S., & Tafer, H. (2015). Draft Genome of Cladophialophora immunda, a Black Yeast and Efficient Degrader of Polyaromatic Hydrocarbons. Genome announcements, 3(1), . https://doi.org/10.1128/genomeA.01283-14
Sterflinger, Katja, et al. "Draft Genome of Cladophialophora immunda, a Black Yeast and Efficient Degrader of Polyaromatic Hydrocarbons." Genome announcements vol. 3,1 (2015). doi: https://doi.org/10.1128/genomeA.01283-14
Sterflinger K, Lopandic K, Blasi B, Poynter C, de Hoog S, Tafer H. Draft Genome of Cladophialophora immunda, a Black Yeast and Efficient Degrader of Polyaromatic Hydrocarbons. Genome Announc. 2015 Jan 29;3(1). doi: 10.1128/genomeA.01283-14. PMID: 25635024; PMCID: PMC4319495.
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Showing 1 to 12 of 25 entries