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Historeceptomic Fingerprints for Drug-Like Compounds.

Frontiers in physiology

Shmelkov E, Grigoryan A, Swetnam J, Xin J, Tivon D, Shmelkov SV, Cardozo T.
PMID: 26733872
Front Physiol. 2015 Dec 18;6:371. doi: 10.3389/fphys.2015.00371. eCollection 2015.

Most drugs exert their beneficial and adverse effects through their combined action on several different molecular targets (polypharmacology). The true molecular fingerprint of the direct action of a drug has two components: the ensemble of all the receptors upon...

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Shmelkov E, Grigoryan A, Swetnam J, et al. Historeceptomic Fingerprints for Drug-Like Compounds. Front Physiol. 2015;6:371doi: 10.3389/fphys.2015.00371.
Shmelkov, E., Grigoryan, A., Swetnam, J., Xin, J., Tivon, D., Shmelkov, S. V., & Cardozo, T. (2015). Historeceptomic Fingerprints for Drug-Like Compounds. Frontiers in physiology, 6371. https://doi.org/10.3389/fphys.2015.00371
Shmelkov, Evgeny, et al. "Historeceptomic Fingerprints for Drug-Like Compounds." Frontiers in physiology vol. 6 (2015): 371. doi: https://doi.org/10.3389/fphys.2015.00371
Shmelkov E, Grigoryan A, Swetnam J, Xin J, Tivon D, Shmelkov SV, Cardozo T. Historeceptomic Fingerprints for Drug-Like Compounds. Front Physiol. 2015 Dec 18;6:371. doi: 10.3389/fphys.2015.00371. eCollection 2015. PMID: 26733872; PMCID: PMC4683199.
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Improved electronic coupling in hybrid organic-inorganic nanocomposites employing thiol-functionalized P3HT and bismuth sulfide nanocrystals.

Nanoscale

Martinez L, Higuchi S, MacLachlan AJ, Stavrinadis A, Miller NC, Diedenhofen SL, Bernechea M, Sweetnam S, Nelson J, Haque SA, Tajima K, Konstantatos G.
PMID: 25029606
Nanoscale. 2014 Sep 07;6(17):10018-26. doi: 10.1039/c4nr01679c.

In this study, we employ a thiol-functionalized polymer (P3HT-SH) as a leverage to tailor the nanomorphology and electronic coupling in polymer-nanocrystal composites for hybrid solar cells. The presence of the thiol functional group allows for a highly crystalline semiconducting...

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Martinez L, Higuchi S, MacLachlan AJ, et al. Improved electronic coupling in hybrid organic-inorganic nanocomposites employing thiol-functionalized P3HT and bismuth sulfide nanocrystals. Nanoscale. 2014;6(17):10018-26doi: 10.1039/c4nr01679c.
Martinez, L., Higuchi, S., MacLachlan, A. J., Stavrinadis, A., Miller, N. C., Diedenhofen, S. L., Bernechea, M., Sweetnam, S., Nelson, J., Haque, S. A., Tajima, K., & Konstantatos, G. (2014). Improved electronic coupling in hybrid organic-inorganic nanocomposites employing thiol-functionalized P3HT and bismuth sulfide nanocrystals. Nanoscale, 6(17), 10018-26. https://doi.org/10.1039/c4nr01679c
Martinez, L, et al. "Improved electronic coupling in hybrid organic-inorganic nanocomposites employing thiol-functionalized P3HT and bismuth sulfide nanocrystals." Nanoscale vol. 6,17 (2014): 10018-26. doi: https://doi.org/10.1039/c4nr01679c
Martinez L, Higuchi S, MacLachlan AJ, Stavrinadis A, Miller NC, Diedenhofen SL, Bernechea M, Sweetnam S, Nelson J, Haque SA, Tajima K, Konstantatos G. Improved electronic coupling in hybrid organic-inorganic nanocomposites employing thiol-functionalized P3HT and bismuth sulfide nanocrystals. Nanoscale. 2014 Sep 07;6(17):10018-26. doi: 10.1039/c4nr01679c. PMID: 25029606.
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Royal Medical Benevolent Fund reminds readers of its Christmas appeal.

Clinical radiology

Sweetnam R.
PMID: 11124084
Clin Radiol. 2000 Dec;55(12):983. doi: 10.1053/crad.2000.0611.

No abstract available.

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Sweetnam R. Royal Medical Benevolent Fund reminds readers of its Christmas appeal. Clin Radiol. 2000;55(12):983doi: 10.1053/crad.2000.0611.
Sweetnam, R. (2000). Royal Medical Benevolent Fund reminds readers of its Christmas appeal. Clinical radiology, 55(12), 983. https://doi.org/10.1053/crad.2000.0611
Sweetnam, R. "Royal Medical Benevolent Fund reminds readers of its Christmas appeal." Clinical radiology vol. 55,12 (2000): 983. doi: https://doi.org/10.1053/crad.2000.0611
Sweetnam R. Royal Medical Benevolent Fund reminds readers of its Christmas appeal. Clin Radiol. 2000 Dec;55(12):983. doi: 10.1053/crad.2000.0611. PMID: 11124084.
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Banti's Syndrome in Siblings Treated by Porta-caval Anastomosis (Two cases).

Proceedings of the Royal Society of Medicine

Sweetnam WP.
PMID: 19993871
Proc R Soc Med. 1955 Dec;48(12):1108.

No abstract available.

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Sweetnam WP. Banti's Syndrome in Siblings Treated by Porta-caval Anastomosis (Two cases). Proc R Soc Med. 1955;48(12):1108
Sweetnam, W. P. (1955). Banti's Syndrome in Siblings Treated by Porta-caval Anastomosis (Two cases). Proceedings of the Royal Society of Medicine, 48(12), 1108.
Sweetnam, W P. "Banti's Syndrome in Siblings Treated by Porta-caval Anastomosis (Two cases)." Proceedings of the Royal Society of Medicine vol. 48,12 (1955): 1108.
Sweetnam WP. Banti's Syndrome in Siblings Treated by Porta-caval Anastomosis (Two cases). Proc R Soc Med. 1955 Dec;48(12):1108. PMID: 19993871; PMCID: PMC1919335.
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Light trapping to amplify metal enhanced fluorescence with application for sensing TNT.

Journal of fluorescence

Matoian MA, Sweetman R, Hall EC, Albanese S, Euler WB.
PMID: 23666028
J Fluoresc. 2013 Sep;23(5):877-80. doi: 10.1007/s10895-013-1232-8. Epub 2013 May 11.

Metal Enhanced Fluorescence (MEF) typically produces enhancement factors of 10 to 50. By using a polymer layer as the dielectric spacer enhancements as high as 1,600 can be observed. The effect occurs with a variety of different polymers and...

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Matoian MA, Sweetman R, Hall EC, et al. Light trapping to amplify metal enhanced fluorescence with application for sensing TNT. J Fluoresc. 2013;23(5):877-80doi: 10.1007/s10895-013-1232-8.
Matoian, M. A., Sweetman, R., Hall, E. C., Albanese, S., & Euler, W. B. (2013). Light trapping to amplify metal enhanced fluorescence with application for sensing TNT. Journal of fluorescence, 23(5), 877-80. https://doi.org/10.1007/s10895-013-1232-8
Matoian, Meredith A, et al. "Light trapping to amplify metal enhanced fluorescence with application for sensing TNT." Journal of fluorescence vol. 23,5 (2013): 877-80. doi: https://doi.org/10.1007/s10895-013-1232-8
Matoian MA, Sweetman R, Hall EC, Albanese S, Euler WB. Light trapping to amplify metal enhanced fluorescence with application for sensing TNT. J Fluoresc. 2013 Sep;23(5):877-80. doi: 10.1007/s10895-013-1232-8. Epub 2013 May 11. PMID: 23666028.
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The Friends of Cancer Research Real-World Data Collaboration Pilot 2.0: Methodological Recommendations from Oncology Case Studies.

Clinical pharmacology and therapeutics

Rivera DR, Henk HJ, Garrett-Mayer E, Christian JB, Belli AJ, Bruinooge SS, Espirito JL, Sweetnam C, Izano MA, Natanzon Y, Robert NJ, Walker MS, Cohen AB, Boyd M, Enewold L, Hansen E, Honnold R, Kushi L, Mishra Kalyani PS, Pe Benito R, Sakoda LC, Sharon E, Tymejczyk O, Valice E, Wagner J, Lasiter L, Allen JD.
PMID: 34664259
Clin Pharmacol Ther. 2022 Jan;111(1):283-292. doi: 10.1002/cpt.2453. Epub 2021 Nov 11.

The purpose of this study was to evaluate the potential collective opportunities and challenges of transforming real-world data (RWD) to real-world evidence for clinical effectiveness by focusing on aligning analytic definitions of oncology end points. Patients treated with a...

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Rivera DR, Henk HJ, Garrett-Mayer E, et al. The Friends of Cancer Research Real-World Data Collaboration Pilot 2.0: Methodological Recommendations from Oncology Case Studies. Clin Pharmacol Ther. 2021;111(1):283-292doi: 10.1002/cpt.2453.
Rivera, D. R., Henk, H. J., Garrett-Mayer, E., Christian, J. B., Belli, A. J., Bruinooge, S. S., Espirito, J. L., Sweetnam, C., Izano, M. A., Natanzon, Y., Robert, N. J., Walker, M. S., Cohen, A. B., Boyd, M., Enewold, L., Hansen, E., Honnold, R., Kushi, L., Mishra Kalyani, P. S., Pe Benito, R., Sakoda, L. C., Sharon, E., Tymejczyk, O., Valice, E., Wagner, J., Lasiter, L., & Allen, J. D. (2022). The Friends of Cancer Research Real-World Data Collaboration Pilot 2.0: Methodological Recommendations from Oncology Case Studies. Clinical pharmacology and therapeutics, 111(1), 283-292. https://doi.org/10.1002/cpt.2453
Rivera, Donna R, et al. "The Friends of Cancer Research Real-World Data Collaboration Pilot 2.0: Methodological Recommendations from Oncology Case Studies." Clinical pharmacology and therapeutics vol. 111,1 (2022): 283-292. doi: https://doi.org/10.1002/cpt.2453
Rivera DR, Henk HJ, Garrett-Mayer E, Christian JB, Belli AJ, Bruinooge SS, Espirito JL, Sweetnam C, Izano MA, Natanzon Y, Robert NJ, Walker MS, Cohen AB, Boyd M, Enewold L, Hansen E, Honnold R, Kushi L, Mishra Kalyani PS, Pe Benito R, Sakoda LC, Sharon E, Tymejczyk O, Valice E, Wagner J, Lasiter L, Allen JD. The Friends of Cancer Research Real-World Data Collaboration Pilot 2.0: Methodological Recommendations from Oncology Case Studies. Clin Pharmacol Ther. 2022 Jan;111(1):283-292. doi: 10.1002/cpt.2453. Epub 2021 Nov 11. PMID: 34664259.
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A retrospective cohort study of clinical factors, visit patterns, and demographic factors associated with use of remote communications in patients with headache.

Headache

Mueller B, Sweetnam C, Klenofsky B, Pace A, Grant J, Natbony L, Robinson-Papp J, Kummer B.
PMID: 34713896
Headache. 2021 Oct 29; doi: 10.1111/head.14226. Epub 2021 Oct 29.

OBJECTIVE: To identify the characteristics associated with high utilization of remote communications (RCs) in patients with headache.BACKGROUND: Patients with headache frequently communicate with their providers using secure portal messaging and telephone calls. However, clinical and demographic factors as well...

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Mueller B, Sweetnam C, Klenofsky B, et al. A retrospective cohort study of clinical factors, visit patterns, and demographic factors associated with use of remote communications in patients with headache. Headache. 2021;doi: 10.1111/head.14226.
Mueller, B., Sweetnam, C., Klenofsky, B., Pace, A., Grant, J., Natbony, L., Robinson-Papp, J., & Kummer, B. (2021). A retrospective cohort study of clinical factors, visit patterns, and demographic factors associated with use of remote communications in patients with headache. Headache, . https://doi.org/10.1111/head.14226
Mueller, Bridget, et al. "A retrospective cohort study of clinical factors, visit patterns, and demographic factors associated with use of remote communications in patients with headache." Headache vol. (2021). doi: https://doi.org/10.1111/head.14226
Mueller B, Sweetnam C, Klenofsky B, Pace A, Grant J, Natbony L, Robinson-Papp J, Kummer B. A retrospective cohort study of clinical factors, visit patterns, and demographic factors associated with use of remote communications in patients with headache. Headache. 2021 Oct 29; doi: 10.1111/head.14226. Epub 2021 Oct 29. PMID: 34713896.
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Furin Cleavage Site Is Key to SARS-CoV-2 Pathogenesis.

bioRxiv : the preprint server for biology

Johnson BA, Xie X, Kalveram B, Lokugamage KG, Muruato A, Zou J, Zhang X, Juelich T, Smith JK, Zhang L, Bopp N, Schindewolf C, Vu M, Vanderheiden A, Swetnam D, Plante JA, Aguilar P, Plante KS, Lee B, Weaver SC, Suthar MS, Routh AL, Ren P, Ku Z, An Z, Debbink K, Shi PY, Freiberg AN, Menachery VD.
PMID: 32869021
bioRxiv. 2020 Aug 26; doi: 10.1101/2020.08.26.268854.

SARS-CoV-2 has resulted in a global pandemic and shutdown economies around the world. Sequence analysis indicates that the novel coronavirus (CoV) has an insertion of a furin cleavage site (PRRAR) in its spike protein. Absent in other group 2B...

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Johnson BA, Xie X, Kalveram B, et al. Furin Cleavage Site Is Key to SARS-CoV-2 Pathogenesis. bioRxiv. 2020;doi: 10.1101/2020.08.26.268854.
Johnson, B. A., Xie, X., Kalveram, B., Lokugamage, K. G., Muruato, A., Zou, J., Zhang, X., Juelich, T., Smith, J. K., Zhang, L., Bopp, N., Schindewolf, C., Vu, M., Vanderheiden, A., Swetnam, D., Plante, J. A., Aguilar, P., Plante, K. S., Lee, B., Weaver, S. C., Suthar, M. S., Routh, A. L., Ren, P., Ku, Z., An, Z., Debbink, K., Shi, P. Y., Freiberg, A. N., & Menachery, V. D. (2020). Furin Cleavage Site Is Key to SARS-CoV-2 Pathogenesis. bioRxiv : the preprint server for biology, . https://doi.org/10.1101/2020.08.26.268854
Johnson, Bryan A, et al. "Furin Cleavage Site Is Key to SARS-CoV-2 Pathogenesis." bioRxiv : the preprint server for biology vol. (2020). doi: https://doi.org/10.1101/2020.08.26.268854
Johnson BA, Xie X, Kalveram B, Lokugamage KG, Muruato A, Zou J, Zhang X, Juelich T, Smith JK, Zhang L, Bopp N, Schindewolf C, Vu M, Vanderheiden A, Swetnam D, Plante JA, Aguilar P, Plante KS, Lee B, Weaver SC, Suthar MS, Routh AL, Ren P, Ku Z, An Z, Debbink K, Shi PY, Freiberg AN, Menachery VD. Furin Cleavage Site Is Key to SARS-CoV-2 Pathogenesis. bioRxiv. 2020 Aug 26; doi: 10.1101/2020.08.26.268854. PMID: 32869021; PMCID: PMC7457603.
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Ten simple rules to cultivate transdisciplinary collaboration in data science.

PLoS computational biology

Sahneh F, Balk MA, Kisley M, Chan CK, Fox M, Nord B, Lyons E, Swetnam T, Huppenkothen D, Sutherland W, Walls RL, Quinn DP, Tarin T, LeBauer D, Ribes D, Birnie DP, Lushbough C, Carr E, Nearing G, Fischer J, Tyle K, Carrasco L, Lang M, Rose PW, Rushforth RR, Roy S, Matheson T, Lee T, Brown CT, Teal TK, Papeș M, Kobourov S, Merchant N.
PMID: 33983959
PLoS Comput Biol. 2021 May 13;17(5):e1008879. doi: 10.1371/journal.pcbi.1008879. eCollection 2021 May.

No abstract available.

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Sahneh F, Balk MA, Kisley M, et al. Ten simple rules to cultivate transdisciplinary collaboration in data science. PLoS Comput Biol. 2021;17(5):e1008879doi: 10.1371/journal.pcbi.1008879.
Sahneh, F., Balk, M. A., Kisley, M., Chan, C. K., Fox, M., Nord, B., Lyons, E., Swetnam, T., Huppenkothen, D., Sutherland, W., Walls, R. L., Quinn, D. P., Tarin, T., LeBauer, D., Ribes, D., Birnie, D. P., Lushbough, C., Carr, E., Nearing, G., Fischer, J., Tyle, K., Carrasco, L., Lang, M., Rose, P. W., Rushforth, R. R., Roy, S., Matheson, T., Lee, T., Brown, C. T., Teal, T. K., Papeș, M., Kobourov, S., & Merchant, N. (2021). Ten simple rules to cultivate transdisciplinary collaboration in data science. PLoS computational biology, 17(5), e1008879. https://doi.org/10.1371/journal.pcbi.1008879
Sahneh, Faryad, et al. "Ten simple rules to cultivate transdisciplinary collaboration in data science." PLoS computational biology vol. 17,5 (2021): e1008879. doi: https://doi.org/10.1371/journal.pcbi.1008879
Sahneh F, Balk MA, Kisley M, Chan CK, Fox M, Nord B, Lyons E, Swetnam T, Huppenkothen D, Sutherland W, Walls RL, Quinn DP, Tarin T, LeBauer D, Ribes D, Birnie DP, Lushbough C, Carr E, Nearing G, Fischer J, Tyle K, Carrasco L, Lang M, Rose PW, Rushforth RR, Roy S, Matheson T, Lee T, Brown CT, Teal TK, Papeș M, Kobourov S, Merchant N. Ten simple rules to cultivate transdisciplinary collaboration in data science. PLoS Comput Biol. 2021 May 13;17(5):e1008879. doi: 10.1371/journal.pcbi.1008879. eCollection 2021 May. PMID: 33983959; PMCID: PMC8118297.
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Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants.

bioRxiv : the preprint server for biology

Jaworski E, Langsjoen RM, Mitchell B, Judy B, Newman P, Plante JA, Plante KS, Miller AL, Zhou Y, Swetnam D, Sotcheff S, Morris V, Saada N, Machado R, McConnell A, Widen S, Thompson J, Dong J, Ren P, Pyles RB, Ksiazek T, Menachery VD, Weaver SC, Routh A.
PMID: 33758846
bioRxiv. 2021 Mar 11; doi: 10.1101/2021.03.10.434828.

High-throughput genomics of SARS-CoV-2 is essential to characterize virus evolution and to identify adaptations that affect pathogenicity or transmission. While single-nucleotide variations (SNVs) are commonly considered as driving virus adaption, RNA recombination events that delete or insert nucleic acid...

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Jaworski E, Langsjoen RM, Mitchell B, et al. Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants. bioRxiv. 2021;doi: 10.1101/2021.03.10.434828.
Jaworski, E., Langsjoen, R. M., Mitchell, B., Judy, B., Newman, P., Plante, J. A., Plante, K. S., Miller, A. L., Zhou, Y., Swetnam, D., Sotcheff, S., Morris, V., Saada, N., Machado, R., McConnell, A., Widen, S., Thompson, J., Dong, J., Ren, P., Pyles, R. B., Ksiazek, T., Menachery, V. D., Weaver, S. C., & Routh, A. (2021). Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants. bioRxiv : the preprint server for biology, . https://doi.org/10.1101/2021.03.10.434828
Jaworski, Elizabeth, et al. "Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants." bioRxiv : the preprint server for biology vol. (2021). doi: https://doi.org/10.1101/2021.03.10.434828
Jaworski E, Langsjoen RM, Mitchell B, Judy B, Newman P, Plante JA, Plante KS, Miller AL, Zhou Y, Swetnam D, Sotcheff S, Morris V, Saada N, Machado R, McConnell A, Widen S, Thompson J, Dong J, Ren P, Pyles RB, Ksiazek T, Menachery VD, Weaver SC, Routh A. Tiled-ClickSeq for targeted sequencing of complete coronavirus genomes with simultaneous capture of RNA recombination and minority variants. bioRxiv. 2021 Mar 11; doi: 10.1101/2021.03.10.434828. PMID: 33758846; PMCID: PMC7987005.
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Royal Medical Benevolent Fund reminds readers of its Christmas appeal.

BMJ (Clinical research ed.)

Sweetnam R.
PMID: 10567158
BMJ. 1999 Nov 20;319(7221):1369. doi: 10.1136/bmj.319.7221.1369.

No abstract available.

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Sweetnam R. Royal Medical Benevolent Fund reminds readers of its Christmas appeal. BMJ. 1999;319(7221):1369doi: 10.1136/bmj.319.7221.1369.
Sweetnam, R. (1999). Royal Medical Benevolent Fund reminds readers of its Christmas appeal. BMJ (Clinical research ed.), 319(7221), 1369. https://doi.org/10.1136/bmj.319.7221.1369
Sweetnam. "Royal Medical Benevolent Fund reminds readers of its Christmas appeal." BMJ (Clinical research ed.) vol. 319,7221 (1999): 1369. doi: https://doi.org/10.1136/bmj.319.7221.1369
Sweetnam R. Royal Medical Benevolent Fund reminds readers of its Christmas appeal. BMJ. 1999 Nov 20;319(7221):1369. doi: 10.1136/bmj.319.7221.1369. PMID: 10567158; PMCID: PMC1117098.
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Congenital fibrosis of the liver as a familial defect.

Lancet (London, England)

SWEETNAM WP, SYKES CG.
PMID: 13774271
Lancet. 1961 Feb 18;1(7173):374-6. doi: 10.1016/s0140-6736(61)91539-2.

No abstract available.

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SWEETNAM WP, SYKES CG. Congenital fibrosis of the liver as a familial defect. Lancet. 1961;1(7173):374-6doi: 10.1016/s0140-6736(61)91539-2.
SWEETNAM, W. P., & SYKES, C. G. (1961). Congenital fibrosis of the liver as a familial defect. Lancet (London, England), 1(7173), 374-6. https://doi.org/10.1016/s0140-6736(61)91539-2
SWEETNAM, W P, and SYKES, C G. "Congenital fibrosis of the liver as a familial defect." Lancet (London, England) vol. 1,7173 (1961): 374-6. doi: https://doi.org/10.1016/s0140-6736(61)91539-2
SWEETNAM WP, SYKES CG. Congenital fibrosis of the liver as a familial defect. Lancet. 1961 Feb 18;1(7173):374-6. doi: 10.1016/s0140-6736(61)91539-2. PMID: 13774271.
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Showing 1 to 12 of 43 entries