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A Genome-wide Association Study of Lung Cancer Identifies a Region of Chromosome 5p15 Associated with Risk for Adenocarcinoma.

American journal of human genetics

Landi MT, Chatterjee N, Yu K, Goldin LR, Goldstein AM, Rotunno M, Mirabello L, Jacobs K, Wheeler W, Yeager M, Bergen AW, Li Q, Consonni D, Pesatori AC, Wacholder S, Thun M, Diver R, Oken M, Virtamo J, Albanes D, Wang Z, Burdette L, Doheny KF, Pugh EW, Laurie C, Brennan P, Hung R, Gaborieau V, McKay JD, Lathrop M, McLaughlin J, Wang Y, Tsao MS, Spitz MR, Wang Y, Krokan H, Vatten L, Skorpen F, Arnesen E, Benhamou S, Bouchard C, Metspalu A, Vooder T, Nelis M, Välk K, Field JK, Chen C, Goodman G, Sulem P, Thorleifsson G, Rafnar T, Eisen T, Sauter W, Rosenberger A, Bickeböller H, Risch A, Chang-Claude J, Wichmann HE, Stefansson K, Houlston R, Amos CI, Fraumeni JF, Savage SA, Bertazzi PA, Tucker MA, Chanock S, Caporaso NE.
PMID: 28472664
Am J Hum Genet. 2011 Jun 10;88(6):861. doi: 10.1016/j.ajhg.2011.05.003. Epub 2011 Jun 10.

No abstract available.

Cite
Landi MT, Chatterjee N, Yu K, et al. A Genome-wide Association Study of Lung Cancer Identifies a Region of Chromosome 5p15 Associated with Risk for Adenocarcinoma. Am J Hum Genet. 2011;88(6):861doi: 10.1016/j.ajhg.2011.05.003.
Landi, M. T., Chatterjee, N., Yu, K., Goldin, L. R., Goldstein, A. M., Rotunno, M., Mirabello, L., Jacobs, K., Wheeler, W., Yeager, M., Bergen, A. W., Li, Q., Consonni, D., Pesatori, A. C., Wacholder, S., Thun, M., Diver, R., Oken, M., Virtamo, J., Albanes, D., Wang, Z., Burdette, L., Doheny, K. F., Pugh, E. W., Laurie, C., Brennan, P., Hung, R., Gaborieau, V., McKay, J. D., Lathrop, M., McLaughlin, J., Wang, Y., Tsao, M. S., Spitz, M. R., Wang, Y., Krokan, H., Vatten, L., Skorpen, F., Arnesen, E., Benhamou, S., Bouchard, C., Metspalu, A., Vooder, T., Nelis, M., Välk, K., Field, J. K., Chen, C., Goodman, G., Sulem, P., Thorleifsson, G., Rafnar, T., Eisen, T., Sauter, W., Rosenberger, A., Bickeböller, H., Risch, A., Chang-Claude, J., Wichmann, H. E., Stefansson, K., Houlston, R., Amos, C. I., Fraumeni, J. F., Savage, S. A., Bertazzi, P. A., Tucker, M. A., Chanock, S., & Caporaso, N. E. (2011). A Genome-wide Association Study of Lung Cancer Identifies a Region of Chromosome 5p15 Associated with Risk for Adenocarcinoma. American journal of human genetics, 88(6), 861. https://doi.org/10.1016/j.ajhg.2011.05.003
Landi, Maria Teresa, et al. "A Genome-wide Association Study of Lung Cancer Identifies a Region of Chromosome 5p15 Associated with Risk for Adenocarcinoma." American journal of human genetics vol. 88,6 (2011): 861. doi: https://doi.org/10.1016/j.ajhg.2011.05.003
Landi MT, Chatterjee N, Yu K, Goldin LR, Goldstein AM, Rotunno M, Mirabello L, Jacobs K, Wheeler W, Yeager M, Bergen AW, Li Q, Consonni D, Pesatori AC, Wacholder S, Thun M, Diver R, Oken M, Virtamo J, Albanes D, Wang Z, Burdette L, Doheny KF, Pugh EW, Laurie C, Brennan P, Hung R, Gaborieau V, McKay JD, Lathrop M, McLaughlin J, Wang Y, Tsao MS, Spitz MR, Wang Y, Krokan H, Vatten L, Skorpen F, Arnesen E, Benhamou S, Bouchard C, Metspalu A, Vooder T, Nelis M, Välk K, Field JK, Chen C, Goodman G, Sulem P, Thorleifsson G, Rafnar T, Eisen T, Sauter W, Rosenberger A, Bickeböller H, Risch A, Chang-Claude J, Wichmann HE, Stefansson K, Houlston R, Amos CI, Fraumeni JF, Savage SA, Bertazzi PA, Tucker MA, Chanock S, Caporaso NE. A Genome-wide Association Study of Lung Cancer Identifies a Region of Chromosome 5p15 Associated with Risk for Adenocarcinoma. Am J Hum Genet. 2011 Jun 10;88(6):861. doi: 10.1016/j.ajhg.2011.05.003. Epub 2011 Jun 10. PMID: 28472664; PMCID: PMC3113243.
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Evolutionary Characterization of the Short Protein SPAAR.

Genes

Lee J, Wacholder A, Carvunis AR.
PMID: 34946813
Genes (Basel). 2021 Nov 24;12(12). doi: 10.3390/genes12121864.

Microproteins (

Cite
Lee J, Wacholder A, Carvunis AR. Evolutionary Characterization of the Short Protein SPAAR. Genes (Basel). 2021;12(12)doi: 10.3390/genes12121864.
Lee, J., Wacholder, A., & Carvunis, A. R. (2021). Evolutionary Characterization of the Short Protein SPAAR. Genes, 12(12), . https://doi.org/10.3390/genes12121864
Lee, Jiwon, et al. "Evolutionary Characterization of the Short Protein SPAAR." Genes vol. 12,12 (2021). doi: https://doi.org/10.3390/genes12121864
Lee J, Wacholder A, Carvunis AR. Evolutionary Characterization of the Short Protein SPAAR. Genes (Basel). 2021 Nov 24;12(12). doi: 10.3390/genes12121864. PMID: 34946813.
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Comparison of antibody responses to human papillomavirus vaccination as measured by three assays.

Frontiers in oncology

Robbins HA, Kemp TJ, Porras C, Rodriguez AC, Schiffman M, Wacholder S, Gonzalez P, Schiller J, Lowy D, Poncelet S, Esser M, Matys K, Hildesheim A, Pinto LA, Herrero R, Safaeian M.
PMID: 24455487
Front Oncol. 2014 Jan 13;3:328. doi: 10.3389/fonc.2013.00328. eCollection 2014 Jan 13.

BACKGROUND: Different assays, including the competitive Luminex immunoassay (cLIA), secreted alkaline phosphatase neutralization assay (SEAP-NA), and virus-like particle-based ELISA, are commonly used to measure antibody responses after human papillomavirus (HPV) vaccination. Direct assay comparisons aid interpretation of immunogenicity data...

Cite
Robbins HA, Kemp TJ, Porras C, et al. Comparison of antibody responses to human papillomavirus vaccination as measured by three assays. Front Oncol. 2014;3:328doi: 10.3389/fonc.2013.00328.
Robbins, H. A., Kemp, T. J., Porras, C., Rodriguez, A. C., Schiffman, M., Wacholder, S., Gonzalez, P., Schiller, J., Lowy, D., Poncelet, S., Esser, M., Matys, K., Hildesheim, A., Pinto, L. A., Herrero, R., & Safaeian, M. (2014). Comparison of antibody responses to human papillomavirus vaccination as measured by three assays. Frontiers in oncology, 3328. https://doi.org/10.3389/fonc.2013.00328
Robbins, Hilary A, et al. "Comparison of antibody responses to human papillomavirus vaccination as measured by three assays." Frontiers in oncology vol. 3 (2014): 328. doi: https://doi.org/10.3389/fonc.2013.00328
Robbins HA, Kemp TJ, Porras C, Rodriguez AC, Schiffman M, Wacholder S, Gonzalez P, Schiller J, Lowy D, Poncelet S, Esser M, Matys K, Hildesheim A, Pinto LA, Herrero R, Safaeian M. Comparison of antibody responses to human papillomavirus vaccination as measured by three assays. Front Oncol. 2014 Jan 13;3:328. doi: 10.3389/fonc.2013.00328. eCollection 2014 Jan 13. PMID: 24455487; PMCID: PMC3888946.
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A population-based cross-sectional study of age-specific risk factors for high risk human papillomavirus prevalence in rural Nigeria.

Infectious agents and cancer

Clarke MA, Gage JC, Ajenifuja KO, Wentzensen NA, Adepiti AC, Wacholder S, Burk RD, Schiffman M.
PMID: 21801395
Infect Agent Cancer. 2011 Jul 29;6:12. doi: 10.1186/1750-9378-6-12.

BACKGROUND: Cervical cancer, caused by persistent infection with carcinogenic human papillomavirus (HR-HPV), is particularly prevalent in Sub-Saharan Africa and is associated with a high mortality rate. Some studies in West Africa, including our own, have found unusually high HR-HPV...

Cite
Clarke MA, Gage JC, Ajenifuja KO, et al. A population-based cross-sectional study of age-specific risk factors for high risk human papillomavirus prevalence in rural Nigeria. Infect Agent Cancer. 2011;6:12doi: 10.1186/1750-9378-6-12.
Clarke, M. A., Gage, J. C., Ajenifuja, K. O., Wentzensen, N. A., Adepiti, A. C., Wacholder, S., Burk, R. D., & Schiffman, M. (2011). A population-based cross-sectional study of age-specific risk factors for high risk human papillomavirus prevalence in rural Nigeria. Infectious agents and cancer, 612. https://doi.org/10.1186/1750-9378-6-12
Clarke, Megan A, et al. "A population-based cross-sectional study of age-specific risk factors for high risk human papillomavirus prevalence in rural Nigeria." Infectious agents and cancer vol. 6 (2011): 12. doi: https://doi.org/10.1186/1750-9378-6-12
Clarke MA, Gage JC, Ajenifuja KO, Wentzensen NA, Adepiti AC, Wacholder S, Burk RD, Schiffman M. A population-based cross-sectional study of age-specific risk factors for high risk human papillomavirus prevalence in rural Nigeria. Infect Agent Cancer. 2011 Jul 29;6:12. doi: 10.1186/1750-9378-6-12. PMID: 21801395; PMCID: PMC3162906.
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Cruising through the journey without getting drowned: The saga of a PhD student in the Netherlands.

Acute medicine

Galen LV, Wachelder J.
PMID: 28424805
Acute Med. 2017;16(1):43-45.

Young medical trainees all over the world are encouraged to investigate unknown areas of medicine that need clarification. This often leads them to undertake a PhD (Doctor of Philosophy). Being curious, critical, and creative are necessary competences which enable...

Cite
Galen LV, Wachelder J. Cruising through the journey without getting drowned: The saga of a PhD student in the Netherlands. Acute Med. 2017;16(1):43-45
Galen, L. V., & Wachelder, J. (2017). Cruising through the journey without getting drowned: The saga of a PhD student in the Netherlands. Acute medicine, 16(1), 43-45.
Galen, Louise van, and Wachelder, Joyce. "Cruising through the journey without getting drowned: The saga of a PhD student in the Netherlands." Acute medicine vol. 16,1 (2017): 43-45.
Galen LV, Wachelder J. Cruising through the journey without getting drowned: The saga of a PhD student in the Netherlands. Acute Med. 2017;16(1):43-45. PMID: 28424805.
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Evolutionary Characterization of the Short Protein SPAAR.

Genes

Lee J, Wacholder A, Carvunis AR.
PMID: 34946813
Genes (Basel). 2021 Nov 24;12(12). doi: 10.3390/genes12121864.

Microproteins (

Cite
Lee J, Wacholder A, Carvunis AR. Evolutionary Characterization of the Short Protein SPAAR. Genes (Basel). 2021;12(12)doi: 10.3390/genes12121864.
Lee, J., Wacholder, A., & Carvunis, A. R. (2021). Evolutionary Characterization of the Short Protein SPAAR. Genes, 12(12), . https://doi.org/10.3390/genes12121864
Lee, Jiwon, et al. "Evolutionary Characterization of the Short Protein SPAAR." Genes vol. 12,12 (2021). doi: https://doi.org/10.3390/genes12121864
Lee J, Wacholder A, Carvunis AR. Evolutionary Characterization of the Short Protein SPAAR. Genes (Basel). 2021 Nov 24;12(12). doi: 10.3390/genes12121864. PMID: 34946813; PMCID: PMC8702040.
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[No title available]

Technology and culture

Wachelder J.
PMID: 35000968
Technol Cult. 2022;63(1):239-241. doi: 10.1353/tech.2022.0011.

No abstract available.

Cite
Wachelder J. . Technol Cult. 2022;63(1):239-241doi: 10.1353/tech.2022.0011.
Wachelder, J. (2022). . Technology and culture, 63(1), 239-241. https://doi.org/10.1353/tech.2022.0011
Wachelder, Joseph. "." Technology and culture vol. 63,1 (2022): 239-241. doi: https://doi.org/10.1353/tech.2022.0011
Wachelder J. . Technol Cult. 2022;63(1):239-241. doi: 10.1353/tech.2022.0011. PMID: 35000968.
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Finding and extending ancient simple sequence repeat-derived regions in the human genome.

Mobile DNA

Shortt JA, Ruggiero RP, Cox C, Wacholder AC, Pollock DD.
PMID: 32095164
Mob DNA. 2020 Feb 17;11:11. doi: 10.1186/s13100-020-00206-y. eCollection 2020.

BACKGROUND: Previously, 3% of the human genome has been annotated as simple sequence repeats (SSRs), similar to the proportion annotated as protein coding. The origin of much of the genome is not well annotated, however, and some of the...

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Shortt JA, Ruggiero RP, Cox C, et al. Finding and extending ancient simple sequence repeat-derived regions in the human genome. Mob DNA. 2020;11:11doi: 10.1186/s13100-020-00206-y.
Shortt, J. A., Ruggiero, R. P., Cox, C., Wacholder, A. C., & Pollock, D. D. (2020). Finding and extending ancient simple sequence repeat-derived regions in the human genome. Mobile DNA, 1111. https://doi.org/10.1186/s13100-020-00206-y
Shortt, Jonathan A, et al. "Finding and extending ancient simple sequence repeat-derived regions in the human genome." Mobile DNA vol. 11 (2020): 11. doi: https://doi.org/10.1186/s13100-020-00206-y
Shortt JA, Ruggiero RP, Cox C, Wacholder AC, Pollock DD. Finding and extending ancient simple sequence repeat-derived regions in the human genome. Mob DNA. 2020 Feb 17;11:11. doi: 10.1186/s13100-020-00206-y. eCollection 2020. PMID: 32095164; PMCID: PMC7027126.
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Deep sequencing of HPV16 genomes: A new high-throughput tool for exploring the carcinogenicity and natural history of HPV16 infection.

Papillomavirus research (Amsterdam, Netherlands)

Cullen M, Boland JF, Schiffman M, Zhang X, Wentzensen N, Yang Q, Chen Z, Yu K, Mitchell J, Roberson D, Bass S, Burdette L, Machado M, Ravichandran S, Luke B, Machiela MJ, Andersen M, Osentoski M, Laptewicz M, Wacholder S, Feldman A, Raine-Bennett T, Lorey T, Castle PE, Yeager M, Burk RD, Mirabello L.
PMID: 26645052
Papillomavirus Res. 2015 Dec 01;1:3-11. doi: 10.1016/j.pvr.2015.05.004.

For unknown reasons, there is huge variability in risk conferred by different HPV types and, remarkably, strong differences even between closely related variant lineages within each type. HPV16 is a uniquely powerful carcinogenic type, causing approximately half of cervical...

Cite
Cullen M, Boland JF, Schiffman M, et al. Deep sequencing of HPV16 genomes: A new high-throughput tool for exploring the carcinogenicity and natural history of HPV16 infection. Papillomavirus Res. 2015;1:3-11doi: 10.1016/j.pvr.2015.05.004.
Cullen, M., Boland, J. F., Schiffman, M., Zhang, X., Wentzensen, N., Yang, Q., Chen, Z., Yu, K., Mitchell, J., Roberson, D., Bass, S., Burdette, L., Machado, M., Ravichandran, S., Luke, B., Machiela, M. J., Andersen, M., Osentoski, M., Laptewicz, M., Wacholder, S., Feldman, A., Raine-Bennett, T., Lorey, T., Castle, P. E., Yeager, M., Burk, R. D., & Mirabello, L. (2015). Deep sequencing of HPV16 genomes: A new high-throughput tool for exploring the carcinogenicity and natural history of HPV16 infection. Papillomavirus research (Amsterdam, Netherlands), 13-11. https://doi.org/10.1016/j.pvr.2015.05.004
Cullen, Michael, et al. "Deep sequencing of HPV16 genomes: A new high-throughput tool for exploring the carcinogenicity and natural history of HPV16 infection." Papillomavirus research (Amsterdam, Netherlands) vol. 1 (2015): 3-11. doi: https://doi.org/10.1016/j.pvr.2015.05.004
Cullen M, Boland JF, Schiffman M, Zhang X, Wentzensen N, Yang Q, Chen Z, Yu K, Mitchell J, Roberson D, Bass S, Burdette L, Machado M, Ravichandran S, Luke B, Machiela MJ, Andersen M, Osentoski M, Laptewicz M, Wacholder S, Feldman A, Raine-Bennett T, Lorey T, Castle PE, Yeager M, Burk RD, Mirabello L. Deep sequencing of HPV16 genomes: A new high-throughput tool for exploring the carcinogenicity and natural history of HPV16 infection. Papillomavirus Res. 2015 Dec 01;1:3-11. doi: 10.1016/j.pvr.2015.05.004. PMID: 26645052; PMCID: PMC4669577.
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Response.

Journal of the National Cancer Institute

Gu F, Wacholder S, Freedman ND, Panagiotou OA, Reyes-Guzman C, Bertazzi PA, Caporaso NE.
PMID: 25381398
J Natl Cancer Inst. 2014 Nov 07;106(12). doi: 10.1093/jnci/dju350. Print 2014 Dec.

No abstract available.

Cite
Gu F, Wacholder S, Freedman ND, et al. Response. J Natl Cancer Inst. 2014;106(12)doi: 10.1093/jnci/dju350.
Gu, F., Wacholder, S., Freedman, N. D., Panagiotou, O. A., Reyes-Guzman, C., Bertazzi, P. A., & Caporaso, N. E. (2014). Response. Journal of the National Cancer Institute, 106(12), . https://doi.org/10.1093/jnci/dju350
Gu, Fangyi, et al. "Response." Journal of the National Cancer Institute vol. 106,12 (2014). doi: https://doi.org/10.1093/jnci/dju350
Gu F, Wacholder S, Freedman ND, Panagiotou OA, Reyes-Guzman C, Bertazzi PA, Caporaso NE. Response. J Natl Cancer Inst. 2014 Nov 07;106(12). doi: 10.1093/jnci/dju350. Print 2014 Dec. PMID: 25381398; PMCID: PMC4271082.
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Right-sided ectocervical lesions may be associated with false-negative cytology among women with histologic cervical intraepithelial neoplasia 2 or 3.

Journal of lower genital tract disease

Jeronimo J, Castle PE, Herrero R, Sherman ME, Bratti MC, Hildesheim A, Alfaro M, Morales J, Hutchinson ML, Burk RD, Lorincz A, Wacholder S, Rodríguez AC, Schiffman M.
PMID: 17051065
J Low Genit Tract Dis. 2003 Jul;7(3):175-83. doi: 10.1097/00128360-200307000-00004.

BACKGROUND: The association between the location of an ectocervical lesion and the sensibility of cytologic screening has not been adequately evaluated.METHODS: We evaluated the proportion of false-negative cytologic interpretations using three independent cytologic interpretations (conventional, PapNet, and ThinPrep) according...

Cite
Jeronimo J, Castle PE, Herrero R, et al. Right-sided ectocervical lesions may be associated with false-negative cytology among women with histologic cervical intraepithelial neoplasia 2 or 3. J Low Genit Tract Dis. 2003;7(3):175-83doi: 10.1097/00128360-200307000-00004.
Jeronimo, J., Castle, P. E., Herrero, R., Sherman, M. E., Bratti, M. C., Hildesheim, A., Alfaro, M., Morales, J., Hutchinson, M. L., Burk, R. D., Lorincz, A., Wacholder, S., Rodríguez, A. C., & Schiffman, M. (2003). Right-sided ectocervical lesions may be associated with false-negative cytology among women with histologic cervical intraepithelial neoplasia 2 or 3. Journal of lower genital tract disease, 7(3), 175-83. https://doi.org/10.1097/00128360-200307000-00004
Jeronimo, Jose, et al. "Right-sided ectocervical lesions may be associated with false-negative cytology among women with histologic cervical intraepithelial neoplasia 2 or 3." Journal of lower genital tract disease vol. 7,3 (2003): 175-83. doi: https://doi.org/10.1097/00128360-200307000-00004
Jeronimo J, Castle PE, Herrero R, Sherman ME, Bratti MC, Hildesheim A, Alfaro M, Morales J, Hutchinson ML, Burk RD, Lorincz A, Wacholder S, Rodríguez AC, Schiffman M. Right-sided ectocervical lesions may be associated with false-negative cytology among women with histologic cervical intraepithelial neoplasia 2 or 3. J Low Genit Tract Dis. 2003 Jul;7(3):175-83. doi: 10.1097/00128360-200307000-00004. PMID: 17051065.
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[Necessity and possibility of special hygienic care for night-shift workers].

Das Deutsche Gesundheitswesen

WACHHOLDER K.
PMID: 14849353
Dtsch Gesundheitsw. 1951 Jun 21;6(25):685-90.

No abstract available.

Cite
WACHHOLDER K. Uber die Notwendigkeit und die Möglichkeit besonderer gesundheitlicher Fürsorge für Nachtschichtarbeiter. [Necessity and possibility of special hygienic care for night-shift workers]. Dtsch Gesundheitsw. 1951;6(25):685-90
WACHHOLDER, K. (1951). Uber die Notwendigkeit und die Möglichkeit besonderer gesundheitlicher Fürsorge für Nachtschichtarbeiter. [Necessity and possibility of special hygienic care for night-shift workers]. Das Deutsche Gesundheitswesen, 6(25), 685-90.
WACHHOLDER, K. "Uber die Notwendigkeit und die Möglichkeit besonderer gesundheitlicher Fürsorge für Nachtschichtarbeiter." [Necessity and possibility of special hygienic care for night-shift workers]. Das Deutsche Gesundheitswesen vol. 6,25 (1951): 685-90.
WACHHOLDER K. Uber die Notwendigkeit und die Möglichkeit besonderer gesundheitlicher Fürsorge für Nachtschichtarbeiter. [Necessity and possibility of special hygienic care for night-shift workers]. Dtsch Gesundheitsw. 1951 Jun 21;6(25):685-90. Undetermined. PMID: 14849353.
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