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Open Genetic Code: on open source in the life sciences.

Life sciences, society and policy

Deibel E.
PMID: 26573980
Life Sci Soc Policy. 2014;10:2. doi: 10.1186/2195-7819-10-2. Epub 2014 Jan 09.

The introduction of open source in the life sciences is increasingly being suggested as an alternative to patenting. This is an alternative, however, that takes its shape at the intersection of the life sciences and informatics. Numerous examples can...

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Deibel E. Open Genetic Code: on open source in the life sciences. Life Sci Soc Policy. 2014;10:2doi: 10.1186/2195-7819-10-2.
Deibel, E. (2014). Open Genetic Code: on open source in the life sciences. Life sciences, society and policy, 102. https://doi.org/10.1186/2195-7819-10-2
Deibel, Eric. "Open Genetic Code: on open source in the life sciences." Life sciences, society and policy vol. 10 (2014): 2. doi: https://doi.org/10.1186/2195-7819-10-2
Deibel E. Open Genetic Code: on open source in the life sciences. Life Sci Soc Policy. 2014;10:2. doi: 10.1186/2195-7819-10-2. Epub 2014 Jan 09. PMID: 26573980; PMCID: PMC4513027.
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Electrochemistry, chemical reactivity, and time-resolved infrared spectroscopy of donor-acceptor systems [(Q(x))Pt(pap(y))] (Q = substituted o-quinone or o-iminoquinone; pap = phenylazopyridine).

Inorganic chemistry

Deibel N, Schweinfurth D, Hohloch S, Delor M, Sazanovich IV, Towrie M, Weinstein JA, Sarkar B.
PMID: 24400886
Inorg Chem. 2014 Jan 21;53(2):1021-31. doi: 10.1021/ic4024713. Epub 2014 Jan 08.

The donor-acceptor complex [((O,N)Q(2-))Pt(pap(0))] (1; pap = phenylazopyridine, (O,N)Q(0) = 4,6-di-tert-butyl-N-phenyl-o-iminobenzoquinone), which displays strong π-bonding interactions and shows strong absorption in the near-IR region, has been investigated with respect to its redox-induced reactivity and electrochemical and excited-state properties. The...

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Deibel N, Schweinfurth D, Hohloch S, et al. Electrochemistry, chemical reactivity, and time-resolved infrared spectroscopy of donor-acceptor systems [(Q(x))Pt(pap(y))] (Q = substituted o-quinone or o-iminoquinone; pap = phenylazopyridine). Inorg Chem. 2014;53(2):1021-31doi: 10.1021/ic4024713.
Deibel, N., Schweinfurth, D., Hohloch, S., Delor, M., Sazanovich, I. V., Towrie, M., Weinstein, J. A., & Sarkar, B. (2014). Electrochemistry, chemical reactivity, and time-resolved infrared spectroscopy of donor-acceptor systems [(Q(x))Pt(pap(y))] (Q = substituted o-quinone or o-iminoquinone; pap = phenylazopyridine). Inorganic chemistry, 53(2), 1021-31. https://doi.org/10.1021/ic4024713
Deibel, Naina, et al. "Electrochemistry, chemical reactivity, and time-resolved infrared spectroscopy of donor-acceptor systems [(Q(x))Pt(pap(y))] (Q = substituted o-quinone or o-iminoquinone; pap = phenylazopyridine)." Inorganic chemistry vol. 53,2 (2014): 1021-31. doi: https://doi.org/10.1021/ic4024713
Deibel N, Schweinfurth D, Hohloch S, Delor M, Sazanovich IV, Towrie M, Weinstein JA, Sarkar B. Electrochemistry, chemical reactivity, and time-resolved infrared spectroscopy of donor-acceptor systems [(Q(x))Pt(pap(y))] (Q = substituted o-quinone or o-iminoquinone; pap = phenylazopyridine). Inorg Chem. 2014 Jan 21;53(2):1021-31. doi: 10.1021/ic4024713. Epub 2014 Jan 08. PMID: 24400886; PMCID: PMC3954650.
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On the effects of scale for ecosystem services mapping.

PloS one

Grêt-Regamey A, Weibel B, Bagstad KJ, Ferrari M, Geneletti D, Klug H, Schirpke U, Tappeiner U.
PMID: 25549256
PLoS One. 2014 Dec 30;9(12):e112601. doi: 10.1371/journal.pone.0112601. eCollection 2014.

Ecosystems provide life-sustaining services upon which human civilization depends, but their degradation largely continues unabated. Spatially explicit information on ecosystem services (ES) provision is required to better guide decision making, particularly for mountain systems, which are characterized by vertical...

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Grêt-Regamey A, Weibel B, Bagstad KJ, et al. On the effects of scale for ecosystem services mapping. PLoS One. 2014;9(12):e112601doi: 10.1371/journal.pone.0112601.
Grêt-Regamey, A., Weibel, B., Bagstad, K. J., Ferrari, M., Geneletti, D., Klug, H., Schirpke, U., & Tappeiner, U. (2014). On the effects of scale for ecosystem services mapping. PloS one, 9(12), e112601. https://doi.org/10.1371/journal.pone.0112601
Grêt-Regamey, Adrienne, et al. "On the effects of scale for ecosystem services mapping." PloS one vol. 9,12 (2014): e112601. doi: https://doi.org/10.1371/journal.pone.0112601
Grêt-Regamey A, Weibel B, Bagstad KJ, Ferrari M, Geneletti D, Klug H, Schirpke U, Tappeiner U. On the effects of scale for ecosystem services mapping. PLoS One. 2014 Dec 30;9(12):e112601. doi: 10.1371/journal.pone.0112601. eCollection 2014. PMID: 25549256; PMCID: PMC4280228.
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Complex and strongly anisotropic magnetism in the pure spin system EuRh2Si2.

Journal of physics. Condensed matter : an Institute of Physics journal

Seiro S, Geibel C.
PMID: 24356002
J Phys Condens Matter. 2014 Jan 29;26(4):046002. doi: 10.1088/0953-8984/26/4/046002. Epub 2013 Dec 20.

In divalent Eu systems, the 4f local moment has a pure spin state J = S = 7/2. Although the absence of orbital moment precludes crystal electric field effects, we report a sizable magnetic anisotropy in single crystals of...

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Seiro S, Geibel C. Complex and strongly anisotropic magnetism in the pure spin system EuRh2Si2. J Phys Condens Matter. 2013;26(4):046002doi: 10.1088/0953-8984/26/4/046002.
Seiro, S., & Geibel, C. (2014). Complex and strongly anisotropic magnetism in the pure spin system EuRh2Si2. Journal of physics. Condensed matter : an Institute of Physics journal, 26(4), 046002. https://doi.org/10.1088/0953-8984/26/4/046002
Seiro, Silvia, and Geibel, Christoph. "Complex and strongly anisotropic magnetism in the pure spin system EuRh2Si2." Journal of physics. Condensed matter : an Institute of Physics journal vol. 26,4 (2014): 046002. doi: https://doi.org/10.1088/0953-8984/26/4/046002
Seiro S, Geibel C. Complex and strongly anisotropic magnetism in the pure spin system EuRh2Si2. J Phys Condens Matter. 2014 Jan 29;26(4):046002. doi: 10.1088/0953-8984/26/4/046002. Epub 2013 Dec 20. PMID: 24356002.
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Anisotropy of singlet exciton diffusion in organic semiconductor crystals from ab initio approaches.

The Journal of chemical physics

Stehr V, Engels B, Deibel C, Fink RF.
PMID: 24437892
J Chem Phys. 2014 Jan 14;140(2):024503. doi: 10.1063/1.4858464.

Due to its importance for the function of organic optoelectronic devices, accurate simulations of the singlet exciton diffusion are crucial to predict the performance of new materials. We present a protocol which allows for the efficient directional analysis of...

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Stehr V, Engels B, Deibel C, et al. Anisotropy of singlet exciton diffusion in organic semiconductor crystals from ab initio approaches. J Chem Phys. 2014;140(2):024503doi: 10.1063/1.4858464.
Stehr, V., Engels, B., Deibel, C., & Fink, R. F. (2014). Anisotropy of singlet exciton diffusion in organic semiconductor crystals from ab initio approaches. The Journal of chemical physics, 140(2), 024503. https://doi.org/10.1063/1.4858464
Stehr, V, et al. "Anisotropy of singlet exciton diffusion in organic semiconductor crystals from ab initio approaches." The Journal of chemical physics vol. 140,2 (2014): 024503. doi: https://doi.org/10.1063/1.4858464
Stehr V, Engels B, Deibel C, Fink RF. Anisotropy of singlet exciton diffusion in organic semiconductor crystals from ab initio approaches. J Chem Phys. 2014 Jan 14;140(2):024503. doi: 10.1063/1.4858464. PMID: 24437892.
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Corrigendum: SMN2 splice modulators enhance U1-pre-mRNA association and rescue SMA mice.

Nature chemical biology

Palacino J, Swalley SE, Song C, Cheung AK, Shu L, Zhang X, Van Hoosear M, Shin Y, Chin DN, Keller CG, Beibel M, Renaud NA, Smith TM, Salcius M, Shi X, Hild M, Servais R, Jain M, Deng L, Bullock C, McLellan M, Schuierer S, Murphy L, Blommers MJ, Blaustein C, Berenshteyn F, Lacoste A, Thomas JR, Roma G, Michaud GA, Tseng BS, Porter JA, Myer VE, Tallarico JA, Hamann LG, Curtis D, Fishman MC, Dietrich WF, Dales NA, Sivasankaran R.
PMID: 26991088
Nat Chem Biol. 2016 Apr;12(4):304. doi: 10.1038/nchembio0416-304c.

No abstract available.

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Palacino J, Swalley SE, Song C, et al. Corrigendum: SMN2 splice modulators enhance U1-pre-mRNA association and rescue SMA mice. Nat Chem Biol. 2016;12(4):304doi: 10.1038/nchembio0416-304c.
Palacino, J., Swalley, S. E., Song, C., Cheung, A. K., Shu, L., Zhang, X., Van Hoosear, M., Shin, Y., Chin, D. N., Keller, C. G., Beibel, M., Renaud, N. A., Smith, T. M., Salcius, M., Shi, X., Hild, M., Servais, R., Jain, M., Deng, L., Bullock, C., McLellan, M., Schuierer, S., Murphy, L., Blommers, M. J., Blaustein, C., Berenshteyn, F., Lacoste, A., Thomas, J. R., Roma, G., Michaud, G. A., Tseng, B. S., Porter, J. A., Myer, V. E., Tallarico, J. A., Hamann, L. G., Curtis, D., Fishman, M. C., Dietrich, W. F., Dales, N. A., & Sivasankaran, R. (2016). Corrigendum: SMN2 splice modulators enhance U1-pre-mRNA association and rescue SMA mice. Nature chemical biology, 12(4), 304. https://doi.org/10.1038/nchembio0416-304c
Palacino, James, et al. "Corrigendum: SMN2 splice modulators enhance U1-pre-mRNA association and rescue SMA mice." Nature chemical biology vol. 12,4 (2016): 304. doi: https://doi.org/10.1038/nchembio0416-304c
Palacino J, Swalley SE, Song C, Cheung AK, Shu L, Zhang X, Van Hoosear M, Shin Y, Chin DN, Keller CG, Beibel M, Renaud NA, Smith TM, Salcius M, Shi X, Hild M, Servais R, Jain M, Deng L, Bullock C, McLellan M, Schuierer S, Murphy L, Blommers MJ, Blaustein C, Berenshteyn F, Lacoste A, Thomas JR, Roma G, Michaud GA, Tseng BS, Porter JA, Myer VE, Tallarico JA, Hamann LG, Curtis D, Fishman MC, Dietrich WF, Dales NA, Sivasankaran R. Corrigendum: SMN2 splice modulators enhance U1-pre-mRNA association and rescue SMA mice. Nat Chem Biol. 2016 Apr;12(4):304. doi: 10.1038/nchembio0416-304c. PMID: 26991088.
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Circadian-disruption-induced gene expression changes in rodent mammary tissues.

Oncoscience

Kochan DZ, Ilnytskyy Y, Golubov A, Deibel SH, McDonald RJ, Kovalchuk O.
PMID: 27014724
Oncoscience. 2016 Feb 12;3(2):58-70. doi: 10.18632/oncoscience.292. eCollection 2016.

Evidence is mounting that circadian disruption (CD) is a potential carcinogen in breast cancer development. However, despite the growing concern, to our knowledge, no studies have attempted a genome-wide analysis of CD-induced gene expression changes in mammary tissues. Using...

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Kochan DZ, Ilnytskyy Y, Golubov A, et al. Circadian-disruption-induced gene expression changes in rodent mammary tissues. Oncoscience. 2016;3(2):58-70doi: 10.18632/oncoscience.292.
Kochan, D. Z., Ilnytskyy, Y., Golubov, A., Deibel, S. H., McDonald, R. J., & Kovalchuk, O. (2016). Circadian-disruption-induced gene expression changes in rodent mammary tissues. Oncoscience, 3(2), 58-70. https://doi.org/10.18632/oncoscience.292
Kochan, David Z, et al. "Circadian-disruption-induced gene expression changes in rodent mammary tissues." Oncoscience vol. 3,2 (2016): 58-70. doi: https://doi.org/10.18632/oncoscience.292
Kochan DZ, Ilnytskyy Y, Golubov A, Deibel SH, McDonald RJ, Kovalchuk O. Circadian-disruption-induced gene expression changes in rodent mammary tissues. Oncoscience. 2016 Feb 12;3(2):58-70. doi: 10.18632/oncoscience.292. eCollection 2016. PMID: 27014724; PMCID: PMC4789572.
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Quantum energies of interfaces.

Physical review letters

Graham N, Jaffe RL, Quandt M, Weigel H.
PMID: 11580574
Phys Rev Lett. 2001 Sep 24;87(13):131601. doi: 10.1103/PhysRevLett.87.131601. Epub 2001 Sep 10.

We present a method for computing the one-loop, renormalized quantum energies of symmetrical interfaces of arbitrary dimension and codimension using elementary scattering data. Internal consistency requires finite-energy sum rules relating phase shifts to bound state energies.

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Graham N, Jaffe RL, Quandt M, et al. Quantum energies of interfaces. Phys Rev Lett. 2001;87(13):131601doi: 10.1103/PhysRevLett.87.131601.
Graham, N., Jaffe, R. L., Quandt, M., & Weigel, H. (2001). Quantum energies of interfaces. Physical review letters, 87(13), 131601. https://doi.org/10.1103/PhysRevLett.87.131601
Graham, N, et al. "Quantum energies of interfaces." Physical review letters vol. 87,13 (2001): 131601. doi: https://doi.org/10.1103/PhysRevLett.87.131601
Graham N, Jaffe RL, Quandt M, Weigel H. Quantum energies of interfaces. Phys Rev Lett. 2001 Sep 24;87(13):131601. doi: 10.1103/PhysRevLett.87.131601. Epub 2001 Sep 10. PMID: 11580574.
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A C60 primary ion beam system for time of flight secondary ion mass spectrometry: its development and secondary ion yield characteristics.

Analytical chemistry

Weibel D, Wong S, Lockyer N, Blenkinsopp P, Hill R, Vickerman JC.
PMID: 12705613
Anal Chem. 2003 Apr 01;75(7):1754-64. doi: 10.1021/ac026338o.

A buckminsterfullerene (C60)-based primary ion beam system has been developed for routine application in TOF-SIMS analysis of organic materials. The ion beam system is described, and its performance is characterized. Nanoamp beam currents of C60+ are obtainable in continuous...

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Weibel D, Wong S, Lockyer N, et al. A C60 primary ion beam system for time of flight secondary ion mass spectrometry: its development and secondary ion yield characteristics. Anal Chem. 2003;75(7):1754-64doi: 10.1021/ac026338o.
Weibel, D., Wong, S., Lockyer, N., Blenkinsopp, P., Hill, R., & Vickerman, J. C. (2003). A C60 primary ion beam system for time of flight secondary ion mass spectrometry: its development and secondary ion yield characteristics. Analytical chemistry, 75(7), 1754-64. https://doi.org/10.1021/ac026338o
Weibel, Daniel, et al. "A C60 primary ion beam system for time of flight secondary ion mass spectrometry: its development and secondary ion yield characteristics." Analytical chemistry vol. 75,7 (2003): 1754-64. doi: https://doi.org/10.1021/ac026338o
Weibel D, Wong S, Lockyer N, Blenkinsopp P, Hill R, Vickerman JC. A C60 primary ion beam system for time of flight secondary ion mass spectrometry: its development and secondary ion yield characteristics. Anal Chem. 2003 Apr 01;75(7):1754-64. doi: 10.1021/ac026338o. PMID: 12705613.
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Clinical perception of the therapeutic transaction.

Journal of consulting psychology

FORER BR, FARBEROW NL, FEIFEL H, MEYER MM, SOMMERS VS, TOLMAN RS.
PMID: 13700758
J Consult Psychol. 1961 Apr;25:93-101. doi: 10.1037/h0044887.

No abstract available.

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FORER BR, FARBEROW NL, FEIFEL H, et al. Clinical perception of the therapeutic transaction. J Consult Psychol. 1961;25:93-101doi: 10.1037/h0044887.
FORER, B. R., FARBEROW, N. L., FEIFEL, H., MEYER, M. M., SOMMERS, V. S., & TOLMAN, R. S. (1961). Clinical perception of the therapeutic transaction. Journal of consulting psychology, 2593-101. https://doi.org/10.1037/h0044887
FORER, B R, et al. "Clinical perception of the therapeutic transaction." Journal of consulting psychology vol. 25 (1961): 93-101. doi: https://doi.org/10.1037/h0044887
FORER BR, FARBEROW NL, FEIFEL H, MEYER MM, SOMMERS VS, TOLMAN RS. Clinical perception of the therapeutic transaction. J Consult Psychol. 1961 Apr;25:93-101. doi: 10.1037/h0044887. PMID: 13700758.
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Determination of gap symmetry from angle-dependent H(c2) measurements on CeCu₂Si₂.

Physical review letters

Vieyra HA, Oeschler N, Seiro S, Jeevan HS, Geibel C, Parker D, Steglich F.
PMID: 21668257
Phys Rev Lett. 2011 May 20;106(20):207001. doi: 10.1103/PhysRevLett.106.207001. Epub 2011 May 20.

The tetragonal heavy-fermion compound CeCu₂Si₂ exhibits a superconducting ground state (S type, T(c) = 0.67 K) close to a magnetic instability. Here, we present angle-resolved resistivity measurements of the upper critical field H(c2). In-plane rotation of S-type CeCu₂Si₂ single...

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Vieyra HA, Oeschler N, Seiro S, et al. Determination of gap symmetry from angle-dependent H(c2) measurements on CeCu₂Si₂. Phys Rev Lett. 2011;106(20):207001doi: 10.1103/PhysRevLett.106.207001.
Vieyra, H. A., Oeschler, N., Seiro, S., Jeevan, H. S., Geibel, C., Parker, D., & Steglich, F. (2011). Determination of gap symmetry from angle-dependent H(c2) measurements on CeCu₂Si₂. Physical review letters, 106(20), 207001. https://doi.org/10.1103/PhysRevLett.106.207001
Vieyra, H A, et al. "Determination of gap symmetry from angle-dependent H(c2) measurements on CeCu₂Si₂." Physical review letters vol. 106,20 (2011): 207001. doi: https://doi.org/10.1103/PhysRevLett.106.207001
Vieyra HA, Oeschler N, Seiro S, Jeevan HS, Geibel C, Parker D, Steglich F. Determination of gap symmetry from angle-dependent H(c2) measurements on CeCu₂Si₂. Phys Rev Lett. 2011 May 20;106(20):207001. doi: 10.1103/PhysRevLett.106.207001. Epub 2011 May 20. PMID: 21668257.
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CeFePO: f-d hybridization and quenching of superconductivity.

Physical review letters

Holder MG, Jesche A, Lombardo P, Hayn R, Vyalikh DV, Danzenbächer S, Kummer K, Krellner C, Geibel C, Kucherenko Y, Kim TK, Follath R, Molodtsov SL, Laubschat C.
PMID: 20366999
Phys Rev Lett. 2010 Mar 05;104(9):096402. doi: 10.1103/PhysRevLett.104.096402. Epub 2010 Mar 05.

As a homologue to the new, Fe-based type of high-temperature superconductors, the electronic structure of the heavy-fermion compound CeFePO was studied by means of angle-resolved resonant photoemission. It was experimentally found-and later on confirmed by local-density approximation (LDA) as...

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Holder MG, Jesche A, Lombardo P, et al. CeFePO: f-d hybridization and quenching of superconductivity. Phys Rev Lett. 2010;104(9):096402doi: 10.1103/PhysRevLett.104.096402.
Holder, M. G., Jesche, A., Lombardo, P., Hayn, R., Vyalikh, D. V., Danzenbächer, S., Kummer, K., Krellner, C., Geibel, C., Kucherenko, Y., Kim, T. K., Follath, R., Molodtsov, S. L., & Laubschat, C. (2010). CeFePO: f-d hybridization and quenching of superconductivity. Physical review letters, 104(9), 096402. https://doi.org/10.1103/PhysRevLett.104.096402
Holder, M G, et al. "CeFePO: f-d hybridization and quenching of superconductivity." Physical review letters vol. 104,9 (2010): 096402. doi: https://doi.org/10.1103/PhysRevLett.104.096402
Holder MG, Jesche A, Lombardo P, Hayn R, Vyalikh DV, Danzenbächer S, Kummer K, Krellner C, Geibel C, Kucherenko Y, Kim TK, Follath R, Molodtsov SL, Laubschat C. CeFePO: f-d hybridization and quenching of superconductivity. Phys Rev Lett. 2010 Mar 05;104(9):096402. doi: 10.1103/PhysRevLett.104.096402. Epub 2010 Mar 05. PMID: 20366999.
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Showing 1 to 12 of 223 entries