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Self-assembly of three-dimensional ensembles of magnetic particles with laterally shifted dipoles.

Soft matter

Yener AB, Klapp SH.
PMID: 26768903
Soft Matter. 2016 Feb 21;12(7):2066-75. doi: 10.1039/c5sm02648b. Epub 2016 Jan 15.

We consider a model of colloidal spherical particles carrying a permanent dipole moment which is laterally shifted out of the particles' geometrical centres, i.e. the dipole vector is oriented perpendicular to the radius of the particles. Varying the shift...

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Yener AB, Klapp SH. Self-assembly of three-dimensional ensembles of magnetic particles with laterally shifted dipoles. Soft Matter. 2016;12(7):2066-75doi: 10.1039/c5sm02648b.
Yener, A. B., & Klapp, S. H. (2016). Self-assembly of three-dimensional ensembles of magnetic particles with laterally shifted dipoles. Soft matter, 12(7), 2066-75. https://doi.org/10.1039/c5sm02648b
Yener, Arzu B, and Klapp, Sabine H L. "Self-assembly of three-dimensional ensembles of magnetic particles with laterally shifted dipoles." Soft matter vol. 12,7 (2016): 2066-75. doi: https://doi.org/10.1039/c5sm02648b
Yener AB, Klapp SH. Self-assembly of three-dimensional ensembles of magnetic particles with laterally shifted dipoles. Soft Matter. 2016 Feb 21;12(7):2066-75. doi: 10.1039/c5sm02648b. Epub 2016 Jan 15. PMID: 26768903.
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Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin.

Virus evolution

McWhite CD, Meyer AG, Wilke CO.
PMID: 27713835
Virus Evol. 2016 Jul;2(2). doi: 10.1093/ve/vew026. Epub 2016 Oct 03.

Clinical influenza A virus isolates are frequently not sequenced directly. Instead, a majority of these isolates (~70% in 2015) are first subjected to passaging for amplification, most commonly in non-human cell culture. Here, we find that this passaging leaves...

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McWhite CD, Meyer AG, Wilke CO. Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin. Virus Evol. 2016;2(2)doi: 10.1093/ve/vew026.
McWhite, C. D., Meyer, A. G., & Wilke, C. O. (2016). Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin. Virus evolution, 2(2), . https://doi.org/10.1093/ve/vew026
McWhite, Claire D, et al. "Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin." Virus evolution vol. 2,2 (2016). doi: https://doi.org/10.1093/ve/vew026
McWhite CD, Meyer AG, Wilke CO. Sequence amplification via cell passaging creates spurious signals of positive adaptation in influenza virus H3N2 hemagglutinin. Virus Evol. 2016 Jul;2(2). doi: 10.1093/ve/vew026. Epub 2016 Oct 03. PMID: 27713835; PMCID: PMC5049878.
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Accumulation rates and sediment deposition in the Gökova Bay in Aegean Sea Turkish Coast.

Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine

Uğur A, Yener G.
PMID: 11545515
Appl Radiat Isot. 2001 Oct;55(4):581-8. doi: 10.1016/s0969-8043(01)00106-3.

Sediment accumulation rates were estimated from the vertical distribution of excess 210Pb in sediment cores collected at six stations in the Gökova Bay near the heavily industrialized Turkish Coastal zone of the Aegean Sea. Total 210Pb was determined by...

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Uğur A, Yener G. Accumulation rates and sediment deposition in the Gökova Bay in Aegean Sea Turkish Coast. Appl Radiat Isot. 2001;55(4):581-8doi: 10.1016/s0969-8043(01)00106-3.
Uğur, A., & Yener, G. (2001). Accumulation rates and sediment deposition in the Gökova Bay in Aegean Sea Turkish Coast. Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine, 55(4), 581-8. https://doi.org/10.1016/s0969-8043(01)00106-3
Uğur, A, and Yener, G. "Accumulation rates and sediment deposition in the Gökova Bay in Aegean Sea Turkish Coast." Applied radiation and isotopes : including data, instrumentation and methods for use in agriculture, industry and medicine vol. 55,4 (2001): 581-8. doi: https://doi.org/10.1016/s0969-8043(01)00106-3
Uğur A, Yener G. Accumulation rates and sediment deposition in the Gökova Bay in Aegean Sea Turkish Coast. Appl Radiat Isot. 2001 Oct;55(4):581-8. doi: 10.1016/s0969-8043(01)00106-3. PMID: 11545515.
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Organic homojunction diodes with a high built-in potential: interpretation of the current-voltage characteristics by a generalized Einstein relation.

Physical review letters

Harada K, Werner AG, Pfeiffer M, Bloom CJ, Elliott CM, Leo K.
PMID: 15698298
Phys Rev Lett. 2005 Jan 28;94(3):036601. doi: 10.1103/PhysRevLett.94.036601. Epub 2005 Jan 24.

We realize p- and n-type doping of the organic semiconductor zinc-phthalocyanine using a novel strong organic donor. This allows us to demonstrate the first stable and reproducible organic p-n homojunctions. The diodes show very high built-in potentials, attractive, e.g.,...

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Harada K, Werner AG, Pfeiffer M, et al. Organic homojunction diodes with a high built-in potential: interpretation of the current-voltage characteristics by a generalized Einstein relation. Phys Rev Lett. 2005;94(3):036601doi: 10.1103/PhysRevLett.94.036601.
Harada, K., Werner, A. G., Pfeiffer, M., Bloom, C. J., Elliott, C. M., & Leo, K. (2005). Organic homojunction diodes with a high built-in potential: interpretation of the current-voltage characteristics by a generalized Einstein relation. Physical review letters, 94(3), 036601. https://doi.org/10.1103/PhysRevLett.94.036601
Harada, K, et al. "Organic homojunction diodes with a high built-in potential: interpretation of the current-voltage characteristics by a generalized Einstein relation." Physical review letters vol. 94,3 (2005): 036601. doi: https://doi.org/10.1103/PhysRevLett.94.036601
Harada K, Werner AG, Pfeiffer M, Bloom CJ, Elliott CM, Leo K. Organic homojunction diodes with a high built-in potential: interpretation of the current-voltage characteristics by a generalized Einstein relation. Phys Rev Lett. 2005 Jan 28;94(3):036601. doi: 10.1103/PhysRevLett.94.036601. Epub 2005 Jan 24. PMID: 15698298.
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[Case of chloroma].

Tip Fakultesi mecmuasi

YENER MS, SABAR IR.
PMID: 13569482
Tip Fak Mecm. 1958;21(1):28-36.

No abstract available.

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YENER MS, SABAR IR. Bir (chloroma) vak'asi. [Case of chloroma]. Tip Fak Mecm. 1958;21(1):28-36
YENER, M. S., & SABAR, I. R. (1958). Bir (chloroma) vak'asi. [Case of chloroma]. Tip Fakultesi mecmuasi, 21(1), 28-36.
YENER, M S, and SABAR, I R. "Bir (chloroma) vak'asi." [Case of chloroma]. Tip Fakultesi mecmuasi vol. 21,1 (1958): 28-36.
YENER MS, SABAR IR. Bir (chloroma) vak'asi. [Case of chloroma]. Tip Fak Mecm. 1958;21(1):28-36. Turkish. PMID: 13569482.
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Sensory evoked and event related oscillations in Alzheimer's disease: a short review.

Cognitive neurodynamics

Yener GG, Başar E.
PMID: 22132038
Cogn Neurodyn. 2010 Dec;4(4):263-74. doi: 10.1007/s11571-010-9138-5. Epub 2010 Oct 21.

Diagnosis and treatment of Alzheimer's disease (AD) depend on clinical evaluation and there is a strong need for an objective tool as a biomarker. Our group has investigated brain oscillatory responses in a small group of AD subjects. We...

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Yener GG, Başar E. Sensory evoked and event related oscillations in Alzheimer's disease: a short review. Cogn Neurodyn. 2010;4(4):263-74doi: 10.1007/s11571-010-9138-5.
Yener, G. G., & Başar, E. (2010). Sensory evoked and event related oscillations in Alzheimer's disease: a short review. Cognitive neurodynamics, 4(4), 263-74. https://doi.org/10.1007/s11571-010-9138-5
Yener, Görsev G, and Başar, Erol. "Sensory evoked and event related oscillations in Alzheimer's disease: a short review." Cognitive neurodynamics vol. 4,4 (2010): 263-74. doi: https://doi.org/10.1007/s11571-010-9138-5
Yener GG, Başar E. Sensory evoked and event related oscillations in Alzheimer's disease: a short review. Cogn Neurodyn. 2010 Dec;4(4):263-74. doi: 10.1007/s11571-010-9138-5. Epub 2010 Oct 21. PMID: 22132038; PMCID: PMC2974091.
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The effects of 21 and 23 milimeter aortic valve prosthesis on hemodynamic performance and functional capacity in young adults.

Pakistan journal of medical sciences

Yener AU, Ozcan S, Budak AB, Genc SB, Ozkan T, Cicek OF.
PMID: 24772143
Pak J Med Sci. 2014 Mar;30(2):356-60.

OBJECTIVE: Early and medium-term improvement of functional capacity and regression of left ventricular hypertrophy was evaluated in the young adult patient group following application of 21 mm or 23 mm bileaflet aortic mechanical valve prosthesis due to aortic stenosis....

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Yener AU, Ozcan S, Budak AB, et al. The effects of 21 and 23 milimeter aortic valve prosthesis on hemodynamic performance and functional capacity in young adults. Pak J Med Sci. 2014;30(2):356-60
Yener, A. U., Ozcan, S., Budak, A. B., Genc, S. B., Ozkan, T., & Cicek, O. F. (2014). The effects of 21 and 23 milimeter aortic valve prosthesis on hemodynamic performance and functional capacity in young adults. Pakistan journal of medical sciences, 30(2), 356-60.
Yener, Ali Umit, et al. "The effects of 21 and 23 milimeter aortic valve prosthesis on hemodynamic performance and functional capacity in young adults." Pakistan journal of medical sciences vol. 30,2 (2014): 356-60.
Yener AU, Ozcan S, Budak AB, Genc SB, Ozkan T, Cicek OF. The effects of 21 and 23 milimeter aortic valve prosthesis on hemodynamic performance and functional capacity in young adults. Pak J Med Sci. 2014 Mar;30(2):356-60. PMID: 24772143; PMCID: PMC3999010.
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Digital optical cellular image processor (DOCIP): experimental implementation.

Applied optics

Huang KS, Sawchuk AA, Jenkins BK, Chavel P, Wang JM, Weber AG, Wang CH, Glaser I.
PMID: 20802673
Appl Opt. 1993 Jan 10;32(2):166-73. doi: 10.1364/AO.32.000166.

We demonstrate experimentally the concept of the digital optical cellular image processor architecture by implementing one processing element of a prototype optical computer that includes a 54-gate processor, an instruction decoder, and electronic input-output interfaces. The processor consists of...

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Huang KS, Sawchuk AA, Jenkins BK, et al. Digital optical cellular image processor (DOCIP): experimental implementation. Appl Opt. 1993;32(2):166-73doi: 10.1364/AO.32.000166.
Huang, K. S., Sawchuk, A. A., Jenkins, B. K., Chavel, P., Wang, J. M., Weber, A. G., Wang, C. H., & Glaser, I. (1993). Digital optical cellular image processor (DOCIP): experimental implementation. Applied optics, 32(2), 166-73. https://doi.org/10.1364/AO.32.000166
Huang, K S, et al. "Digital optical cellular image processor (DOCIP): experimental implementation." Applied optics vol. 32,2 (1993): 166-73. doi: https://doi.org/10.1364/AO.32.000166
Huang KS, Sawchuk AA, Jenkins BK, Chavel P, Wang JM, Weber AG, Wang CH, Glaser I. Digital optical cellular image processor (DOCIP): experimental implementation. Appl Opt. 1993 Jan 10;32(2):166-73. doi: 10.1364/AO.32.000166. PMID: 20802673.
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Erratum to: Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures.

Genome biology

Şenbabaoğlu Y, Gejman RS, Winer AG, Liu M, Van Allen EM, de Velasco G, Miao D, Ostrovnaya I, Drill E, Luna A, Weinhold N, Lee W, Manley BJ, Khalil DN, Kaffenberger SD, Chen Y, Danilova L, Voss MH, Coleman JA, Russo P, Reuter VE, Chan TA, Cheng EH, Scheinberg DA, Li MO, Choueiri TK, Hsieh JJ, Sander C, Hakimi AA.
PMID: 28249590
Genome Biol. 2017 Mar 01;18(1):46. doi: 10.1186/s13059-017-1180-8.

No abstract available.

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Şenbabaoğlu Y, Gejman RS, Winer AG, et al. Erratum to: Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures. Genome Biol. 2017;18(1):46doi: 10.1186/s13059-017-1180-8.
Şenbabaoğlu, Y., Gejman, R. S., Winer, A. G., Liu, M., Van Allen, E. M., de Velasco, G., Miao, D., Ostrovnaya, I., Drill, E., Luna, A., Weinhold, N., Lee, W., Manley, B. J., Khalil, D. N., Kaffenberger, S. D., Chen, Y., Danilova, L., Voss, M. H., Coleman, J. A., Russo, P., Reuter, V. E., Chan, T. A., Cheng, E. H., Scheinberg, D. A., Li, M. O., Choueiri, T. K., Hsieh, J. J., Sander, C., & Hakimi, A. A. (2017). Erratum to: Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures. Genome biology, 18(1), 46. https://doi.org/10.1186/s13059-017-1180-8
Şenbabaoğlu, Yasin, et al. "Erratum to: Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures." Genome biology vol. 18,1 (2017): 46. doi: https://doi.org/10.1186/s13059-017-1180-8
Şenbabaoğlu Y, Gejman RS, Winer AG, Liu M, Van Allen EM, de Velasco G, Miao D, Ostrovnaya I, Drill E, Luna A, Weinhold N, Lee W, Manley BJ, Khalil DN, Kaffenberger SD, Chen Y, Danilova L, Voss MH, Coleman JA, Russo P, Reuter VE, Chan TA, Cheng EH, Scheinberg DA, Li MO, Choueiri TK, Hsieh JJ, Sander C, Hakimi AA. Erratum to: Tumor immune microenvironment characterization in clear cell renal cell carcinoma identifies prognostic and immunotherapeutically relevant messenger RNA signatures. Genome Biol. 2017 Mar 01;18(1):46. doi: 10.1186/s13059-017-1180-8. PMID: 28249590; PMCID: PMC5333404.
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Kinetic Benchmarking Reveals the Competence of Prenyl Groups in Ring-Closing Metathesis.

Organic letters

Bahou KA, Braddock DC, Meyer AG, Savage GP.
PMID: 28933551
Org Lett. 2017 Oct 06;19(19):5332-5335. doi: 10.1021/acs.orglett.7b02492. Epub 2017 Sep 21.

A series of prenyl-containing malonates are kinetically benchmarked against the standard allyl-containing congeners using a ruthenium benzylidene precatalyst for ring-closing metatheses. The prenyl grouping is found to be a superior acceptor olefin compared to an allyl group in RCM...

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Bahou KA, Braddock DC, Meyer AG, et al. Kinetic Benchmarking Reveals the Competence of Prenyl Groups in Ring-Closing Metathesis. Org Lett. 2017;19(19):5332-5335doi: 10.1021/acs.orglett.7b02492.
Bahou, K. A., Braddock, D. C., Meyer, A. G., & Savage, G. P. (2017). Kinetic Benchmarking Reveals the Competence of Prenyl Groups in Ring-Closing Metathesis. Organic letters, 19(19), 5332-5335. https://doi.org/10.1021/acs.orglett.7b02492
Bahou, Karim A, et al. "Kinetic Benchmarking Reveals the Competence of Prenyl Groups in Ring-Closing Metathesis." Organic letters vol. 19,19 (2017): 5332-5335. doi: https://doi.org/10.1021/acs.orglett.7b02492
Bahou KA, Braddock DC, Meyer AG, Savage GP. Kinetic Benchmarking Reveals the Competence of Prenyl Groups in Ring-Closing Metathesis. Org Lett. 2017 Oct 06;19(19):5332-5335. doi: 10.1021/acs.orglett.7b02492. Epub 2017 Sep 21. PMID: 28933551.
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The thyroid hormone converting enzyme human deiodinase 1 is inhibited by gold ions from inorganic salts, organic substances, and by small-size nanoparticles.

Chemico-biological interactions

Weber AG, Birk B, Müller C, Schneider S, van Ravenzwaay B, Funk-Weyer D, Landsiedel R.
PMID: 34662569
Chem Biol Interact. 2021 Oct 16;351:109709. doi: 10.1016/j.cbi.2021.109709. Epub 2021 Oct 16.

The selenocysteine-containing enzyme class deiodinases (DIO) consists of three isoforms. DIOs play a role in regulation of thyroid hormone (TH) signaling through the removal of iodide from TH leading to TH that interact with the hypothalamic-pituitary-thyroid (HPT) axis with...

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Weber AG, Birk B, Müller C, et al. The thyroid hormone converting enzyme human deiodinase 1 is inhibited by gold ions from inorganic salts, organic substances, and by small-size nanoparticles. Chem Biol Interact. 2021;351:109709doi: 10.1016/j.cbi.2021.109709.
Weber, A. G., Birk, B., Müller, C., Schneider, S., van Ravenzwaay, B., Funk-Weyer, D., & Landsiedel, R. (2021). The thyroid hormone converting enzyme human deiodinase 1 is inhibited by gold ions from inorganic salts, organic substances, and by small-size nanoparticles. Chemico-biological interactions, 351109709. https://doi.org/10.1016/j.cbi.2021.109709
Weber, Andreas Georg, et al. "The thyroid hormone converting enzyme human deiodinase 1 is inhibited by gold ions from inorganic salts, organic substances, and by small-size nanoparticles." Chemico-biological interactions vol. 351 (2021): 109709. doi: https://doi.org/10.1016/j.cbi.2021.109709
Weber AG, Birk B, Müller C, Schneider S, van Ravenzwaay B, Funk-Weyer D, Landsiedel R. The thyroid hormone converting enzyme human deiodinase 1 is inhibited by gold ions from inorganic salts, organic substances, and by small-size nanoparticles. Chem Biol Interact. 2021 Oct 16;351:109709. doi: 10.1016/j.cbi.2021.109709. Epub 2021 Oct 16. PMID: 34662569.
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EEG measures for clinical research in major vascular cognitive impairment: recommendations by an expert panel.

Neurobiology of aging

Babiloni C, Arakaki X, Bonanni L, Bujan A, Carrillo MC, Del Percio C, Edelmayer RM, Egan G, Elahh FM, Evans A, Ferri R, Frisoni GB, Güntekin B, Hainsworth A, Hampel H, Jelic V, Jeong J, Kim DK, Kramberger M, Kumar S, Lizio R, Nobili F, Noce G, Puce A, Ritter P, Smit DJA, Soricelli A, Teipel S, Tucci F, Sachdev P, Valdes-Sosa M, Valdes-Sosa P, Vergallo A, Yener G.
PMID: 33845399
Neurobiol Aging. 2021 Jul;103:78-97. doi: 10.1016/j.neurobiolaging.2021.03.003. Epub 2021 Mar 10.

Vascular contribution to cognitive impairment (VCI) and dementia is related to etiologies that may affect the neurophysiological mechanisms regulating brain arousal and generating electroencephalographic (EEG) activity. A multidisciplinary expert panel reviewed the clinical literature and reached consensus about the...

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Babiloni C, Arakaki X, Bonanni L, et al. EEG measures for clinical research in major vascular cognitive impairment: recommendations by an expert panel. Neurobiol Aging. 2021;103:78-97doi: 10.1016/j.neurobiolaging.2021.03.003.
Babiloni, C., Arakaki, X., Bonanni, L., Bujan, A., Carrillo, M. C., Del Percio, C., Edelmayer, R. M., Egan, G., Elahh, F. M., Evans, A., Ferri, R., Frisoni, G. B., Güntekin, B., Hainsworth, A., Hampel, H., Jelic, V., Jeong, J., Kim, D. K., Kramberger, M., Kumar, S., Lizio, R., Nobili, F., Noce, G., Puce, A., Ritter, P., Smit, D. J. A., Soricelli, A., Teipel, S., Tucci, F., Sachdev, P., Valdes-Sosa, M., Valdes-Sosa, P., Vergallo, A., & Yener, G. (2021). EEG measures for clinical research in major vascular cognitive impairment: recommendations by an expert panel. Neurobiology of aging, 10378-97. https://doi.org/10.1016/j.neurobiolaging.2021.03.003
Babiloni, Claudio, et al. "EEG measures for clinical research in major vascular cognitive impairment: recommendations by an expert panel." Neurobiology of aging vol. 103 (2021): 78-97. doi: https://doi.org/10.1016/j.neurobiolaging.2021.03.003
Babiloni C, Arakaki X, Bonanni L, Bujan A, Carrillo MC, Del Percio C, Edelmayer RM, Egan G, Elahh FM, Evans A, Ferri R, Frisoni GB, Güntekin B, Hainsworth A, Hampel H, Jelic V, Jeong J, Kim DK, Kramberger M, Kumar S, Lizio R, Nobili F, Noce G, Puce A, Ritter P, Smit DJA, Soricelli A, Teipel S, Tucci F, Sachdev P, Valdes-Sosa M, Valdes-Sosa P, Vergallo A, Yener G. EEG measures for clinical research in major vascular cognitive impairment: recommendations by an expert panel. Neurobiol Aging. 2021 Jul;103:78-97. doi: 10.1016/j.neurobiolaging.2021.03.003. Epub 2021 Mar 10. PMID: 33845399.
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