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Examining the predictive accuracy of the novel 3D N-linear algebraic molecular codifications on benchmark datasets.

Journal of cheminformatics

García-Jacas CR, Contreras-Torres E, Marrero-Ponce Y, Pupo-Meriño M, Barigye SJ, Cabrera-Leyva L.
PMID: 26925168
J Cheminform. 2016 Feb 25;8:10. doi: 10.1186/s13321-016-0122-x. eCollection 2016.

BACKGROUND: Recently, novel 3D alignment-free molecular descriptors (also known as QuBiLS-MIDAS) based on two-linear, three-linear and four-linear algebraic forms have been introduced. These descriptors codify chemical information for relations between two, three and four atoms by using several (dis-)similarity...

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García-Jacas CR, Contreras-Torres E, Marrero-Ponce Y, et al. Examining the predictive accuracy of the novel 3D N-linear algebraic molecular codifications on benchmark datasets. J Cheminform. 2016;8:10doi: 10.1186/s13321-016-0122-x.
García-Jacas, C. R., Contreras-Torres, E., Marrero-Ponce, Y., Pupo-Meriño, M., Barigye, S. J., & Cabrera-Leyva, L. (2016). Examining the predictive accuracy of the novel 3D N-linear algebraic molecular codifications on benchmark datasets. Journal of cheminformatics, 810. https://doi.org/10.1186/s13321-016-0122-x
García-Jacas, César R, et al. "Examining the predictive accuracy of the novel 3D N-linear algebraic molecular codifications on benchmark datasets." Journal of cheminformatics vol. 8 (2016): 10. doi: https://doi.org/10.1186/s13321-016-0122-x
García-Jacas CR, Contreras-Torres E, Marrero-Ponce Y, Pupo-Meriño M, Barigye SJ, Cabrera-Leyva L. Examining the predictive accuracy of the novel 3D N-linear algebraic molecular codifications on benchmark datasets. J Cheminform. 2016 Feb 25;8:10. doi: 10.1186/s13321-016-0122-x. eCollection 2016. PMID: 26925168; PMCID: PMC4768433.
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Prognostic and predictive role of COX-2, XRCC1 and RASSF1 expression in patients with esophageal squamous cell carcinoma receiving radiotherapy.

Oncology letters

Zhang Y, Dong S, Xu R, Yang Y, Zheng Z, Wang X, Ren R, Sun R, Li M, Yang H, Huang Y, Zhou F, Zheng A.
PMID: 28454432
Oncol Lett. 2017 Apr;13(4):2549-2556. doi: 10.3892/ol.2017.5780. Epub 2017 Feb 24.

Identification of biomarkers for predicting radiosensitivity would be useful for administering individualized radiotherapy (RT) to patients with esophageal cancer. The aim of the present study was to evaluate the association between cyclooxygenase-2 (COX-2), X-ray repair cross complementing group 1...

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Zhang Y, Dong S, Xu R, et al. Prognostic and predictive role of COX-2, XRCC1 and RASSF1 expression in patients with esophageal squamous cell carcinoma receiving radiotherapy. Oncol Lett. 2017;13(4):2549-2556doi: 10.3892/ol.2017.5780.
Zhang, Y., Dong, S., Xu, R., Yang, Y., Zheng, Z., Wang, X., Ren, R., Sun, R., Li, M., Yang, H., Huang, Y., Zhou, F., & Zheng, A. (2017). Prognostic and predictive role of COX-2, XRCC1 and RASSF1 expression in patients with esophageal squamous cell carcinoma receiving radiotherapy. Oncology letters, 13(4), 2549-2556. https://doi.org/10.3892/ol.2017.5780
Zhang, Yaowen, et al. "Prognostic and predictive role of COX-2, XRCC1 and RASSF1 expression in patients with esophageal squamous cell carcinoma receiving radiotherapy." Oncology letters vol. 13,4 (2017): 2549-2556. doi: https://doi.org/10.3892/ol.2017.5780
Zhang Y, Dong S, Xu R, Yang Y, Zheng Z, Wang X, Ren R, Sun R, Li M, Yang H, Huang Y, Zhou F, Zheng A. Prognostic and predictive role of COX-2, XRCC1 and RASSF1 expression in patients with esophageal squamous cell carcinoma receiving radiotherapy. Oncol Lett. 2017 Apr;13(4):2549-2556. doi: 10.3892/ol.2017.5780. Epub 2017 Feb 24. PMID: 28454432; PMCID: PMC5403488.
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The traditional Korean herbal medicine Ga-Gam-Nai-Go-Hyan suppresses testosterone-induced benign prostatic hyperplasia by regulating inflammatory responses and apoptosis.

Experimental and therapeutic medicine

Shin SJ, Lee KH, Chung KS, Cheon SY, An HJ.
PMID: 28450936
Exp Ther Med. 2017 Mar;13(3):1025-1031. doi: 10.3892/etm.2017.4088. Epub 2017 Jan 25.

Benign prostatic hyperplasia (BPH) is a pathological condition that affects the majority of men above the age of 50 years. Pharmacological agents are typically used to treat BPH; however, there are currently no pharmacological agents that are able to...

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Shin SJ, Lee KH, Chung KS, et al. The traditional Korean herbal medicine Ga-Gam-Nai-Go-Hyan suppresses testosterone-induced benign prostatic hyperplasia by regulating inflammatory responses and apoptosis. Exp Ther Med. 2017;13(3):1025-1031doi: 10.3892/etm.2017.4088.
Shin, S. J., Lee, K. H., Chung, K. S., Cheon, S. Y., & An, H. J. (2017). The traditional Korean herbal medicine Ga-Gam-Nai-Go-Hyan suppresses testosterone-induced benign prostatic hyperplasia by regulating inflammatory responses and apoptosis. Experimental and therapeutic medicine, 13(3), 1025-1031. https://doi.org/10.3892/etm.2017.4088
Shin, Su-Jin, et al. "The traditional Korean herbal medicine Ga-Gam-Nai-Go-Hyan suppresses testosterone-induced benign prostatic hyperplasia by regulating inflammatory responses and apoptosis." Experimental and therapeutic medicine vol. 13,3 (2017): 1025-1031. doi: https://doi.org/10.3892/etm.2017.4088
Shin SJ, Lee KH, Chung KS, Cheon SY, An HJ. The traditional Korean herbal medicine Ga-Gam-Nai-Go-Hyan suppresses testosterone-induced benign prostatic hyperplasia by regulating inflammatory responses and apoptosis. Exp Ther Med. 2017 Mar;13(3):1025-1031. doi: 10.3892/etm.2017.4088. Epub 2017 Jan 25. PMID: 28450936; PMCID: PMC5403478.
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Cyclooxygenase-2 gene polymorphisms and susceptibility to colorectal cancer in a Brazilian population.

Journal of gastrointestinal oncology

Tomitão MTP, Nahas SC, Kubrusly MS, Furuya TK, Diniz MA, Marie SKN, Safatle-Ribeiro AV, Eluf-Neto J, Cecconello I, Ribeiro Junior U.
PMID: 28890812
J Gastrointest Oncol. 2017 Aug;8(4):629-635. doi: 10.21037/jgo.2017.03.05.

BACKGROUND: Multi-ethnicity of Brazilian population displays high levels of genomic diversity. Polymorphism may detect people at higher risk of developing cancer, distinctive response to treatment, and prognosis. Cyclooxygenase-2 (COX-2) is induced in response to growth factors and cytokines, and...

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Tomitão MTP, Nahas SC, Kubrusly MS, et al. Cyclooxygenase-2 gene polymorphisms and susceptibility to colorectal cancer in a Brazilian population. J Gastrointest Oncol. 2017;8(4):629-635doi: 10.21037/jgo.2017.03.05.
Tomitão, M. T. P., Nahas, S. C., Kubrusly, M. S., Furuya, T. K., Diniz, M. A., Marie, S. K. N., Safatle-Ribeiro, A. V., Eluf-Neto, J., Cecconello, I., & Ribeiro Junior, U. (2017). Cyclooxygenase-2 gene polymorphisms and susceptibility to colorectal cancer in a Brazilian population. Journal of gastrointestinal oncology, 8(4), 629-635. https://doi.org/10.21037/jgo.2017.03.05
Tomitão, Michele Tatiana Pereira, et al. "Cyclooxygenase-2 gene polymorphisms and susceptibility to colorectal cancer in a Brazilian population." Journal of gastrointestinal oncology vol. 8,4 (2017): 629-635. doi: https://doi.org/10.21037/jgo.2017.03.05
Tomitão MTP, Nahas SC, Kubrusly MS, Furuya TK, Diniz MA, Marie SKN, Safatle-Ribeiro AV, Eluf-Neto J, Cecconello I, Ribeiro Junior U. Cyclooxygenase-2 gene polymorphisms and susceptibility to colorectal cancer in a Brazilian population. J Gastrointest Oncol. 2017 Aug;8(4):629-635. doi: 10.21037/jgo.2017.03.05. PMID: 28890812; PMCID: PMC5582032.
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Expression and clinical significance of cyclooxygenase-2 and microRNA-143 in osteosarcoma.

Experimental and therapeutic medicine

Fang Y, Zhang Z, Wang Q, Zhao J.
PMID: 26136990
Exp Ther Med. 2015 Jun;9(6):2374-2378. doi: 10.3892/etm.2015.2420. Epub 2015 Apr 14.

The aim of the present study was to investigate the expression profiles of cyclooxygenase (COX)-2 and microRNA (miRNA)-143 in the tumor tissue and blood samples of patients with osteosarcoma, and their involvement in the disease pathogenesis. Tumor tissue and...

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Fang Y, Zhang Z, Wang Q, et al. Expression and clinical significance of cyclooxygenase-2 and microRNA-143 in osteosarcoma. Exp Ther Med. 2015;9(6):2374-2378doi: 10.3892/etm.2015.2420.
Fang, Y., Zhang, Z., Wang, Q., & Zhao, J. (2015). Expression and clinical significance of cyclooxygenase-2 and microRNA-143 in osteosarcoma. Experimental and therapeutic medicine, 9(6), 2374-2378. https://doi.org/10.3892/etm.2015.2420
Fang, Yongchao, et al. "Expression and clinical significance of cyclooxygenase-2 and microRNA-143 in osteosarcoma." Experimental and therapeutic medicine vol. 9,6 (2015): 2374-2378. doi: https://doi.org/10.3892/etm.2015.2420
Fang Y, Zhang Z, Wang Q, Zhao J. Expression and clinical significance of cyclooxygenase-2 and microRNA-143 in osteosarcoma. Exp Ther Med. 2015 Jun;9(6):2374-2378. doi: 10.3892/etm.2015.2420. Epub 2015 Apr 14. PMID: 26136990; PMCID: PMC4473373.
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Design, synthesis, molecular modeling and biological evaluation of novel diaryl heterocyclic analogs as potential selective cyclooxygenase-2 (COX-2) inhibitors.

Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society

Al-Turki DA, Al-Omar MA, Abou-Zeid LA, Shehata IA, Al-Awady MS.
PMID: 28223863
Saudi Pharm J. 2017 Jan;25(1):59-69. doi: 10.1016/j.jsps.2015.07.001. Epub 2015 Jul 26.

New series of 3,4-diaryl-2-thioxoimidazolidin-4-ones and 3-alkylthio-4,5-diaryl-4

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Al-Turki DA, Al-Omar MA, Abou-Zeid LA, et al. Design, synthesis, molecular modeling and biological evaluation of novel diaryl heterocyclic analogs as potential selective cyclooxygenase-2 (COX-2) inhibitors. Saudi Pharm J. 2015;25(1):59-69doi: 10.1016/j.jsps.2015.07.001.
Al-Turki, D. A., Al-Omar, M. A., Abou-Zeid, L. A., Shehata, I. A., & Al-Awady, M. S. (2017). Design, synthesis, molecular modeling and biological evaluation of novel diaryl heterocyclic analogs as potential selective cyclooxygenase-2 (COX-2) inhibitors. Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society, 25(1), 59-69. https://doi.org/10.1016/j.jsps.2015.07.001
Al-Turki, Deema A, et al. "Design, synthesis, molecular modeling and biological evaluation of novel diaryl heterocyclic analogs as potential selective cyclooxygenase-2 (COX-2) inhibitors." Saudi pharmaceutical journal : SPJ : the official publication of the Saudi Pharmaceutical Society vol. 25,1 (2017): 59-69. doi: https://doi.org/10.1016/j.jsps.2015.07.001
Al-Turki DA, Al-Omar MA, Abou-Zeid LA, Shehata IA, Al-Awady MS. Design, synthesis, molecular modeling and biological evaluation of novel diaryl heterocyclic analogs as potential selective cyclooxygenase-2 (COX-2) inhibitors. Saudi Pharm J. 2017 Jan;25(1):59-69. doi: 10.1016/j.jsps.2015.07.001. Epub 2015 Jul 26. PMID: 28223863; PMCID: PMC5310148.
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Revisiting the role of COX-2 inhibitor for non-small cell lung cancer.

Translational lung cancer research

Yokouchi H, Kanazawa K.
PMID: 26629442
Transl Lung Cancer Res. 2015 Oct;4(5):660-4. doi: 10.3978/j.issn.2218-6751.2015.04.03.

Accumulating preclinical and clinical studies have shown that cyclooxygenase-2 (COX-2) inhibitor has some efficacy for non-small cell lung cancer (NSCLC). However, two phase III clinical trials using COX-2 inhibitor in combination with platinum-based chemotherapy showed no survival benefit for...

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Yokouchi H, Kanazawa K. Revisiting the role of COX-2 inhibitor for non-small cell lung cancer. Transl Lung Cancer Res. 2015;4(5):660-4doi: 10.3978/j.issn.2218-6751.2015.04.03.
Yokouchi, H., & Kanazawa, K. (2015). Revisiting the role of COX-2 inhibitor for non-small cell lung cancer. Translational lung cancer research, 4(5), 660-4. https://doi.org/10.3978/j.issn.2218-6751.2015.04.03
Yokouchi, Hiroshi, and Kanazawa, Kenya. "Revisiting the role of COX-2 inhibitor for non-small cell lung cancer." Translational lung cancer research vol. 4,5 (2015): 660-4. doi: https://doi.org/10.3978/j.issn.2218-6751.2015.04.03
Yokouchi H, Kanazawa K. Revisiting the role of COX-2 inhibitor for non-small cell lung cancer. Transl Lung Cancer Res. 2015 Oct;4(5):660-4. doi: 10.3978/j.issn.2218-6751.2015.04.03. PMID: 26629442; PMCID: PMC4630508.
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Effect of Ixeris dentata Nakai Extract on Nitric Oxide Production and Prostaglandin E2 Generation in LPS-stimulated RAW264.7 Cells.

Immune network

Jung YY, Hong JT, Han SB, Park YH, Son DJ.
PMID: 26770187
Immune Netw. 2015 Dec;15(6):325-30. doi: 10.4110/in.2015.15.6.325. Epub 2015 Dec 24.

Inflammation is the basis of severe acute and chronic diseases. This study investigated the anti-inflammatory property of a crude methanol extract (MeOH-ex) and the solvent fractions of Ixeris dentata Nakai (IDN) in LPS-stimulated murine macrophage-like cell line RAW264.7. Here,...

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Jung YY, Hong JT, Han SB, et al. Effect of Ixeris dentata Nakai Extract on Nitric Oxide Production and Prostaglandin E2 Generation in LPS-stimulated RAW264.7 Cells. Immune Netw. 2015;15(6):325-30doi: 10.4110/in.2015.15.6.325.
Jung, Y. Y., Hong, J. T., Han, S. B., Park, Y. H., & Son, D. J. (2015). Effect of Ixeris dentata Nakai Extract on Nitric Oxide Production and Prostaglandin E2 Generation in LPS-stimulated RAW264.7 Cells. Immune network, 15(6), 325-30. https://doi.org/10.4110/in.2015.15.6.325
Jung, Yu Yeon, et al. "Effect of Ixeris dentata Nakai Extract on Nitric Oxide Production and Prostaglandin E2 Generation in LPS-stimulated RAW264.7 Cells." Immune network vol. 15,6 (2015): 325-30. doi: https://doi.org/10.4110/in.2015.15.6.325
Jung YY, Hong JT, Han SB, Park YH, Son DJ. Effect of Ixeris dentata Nakai Extract on Nitric Oxide Production and Prostaglandin E2 Generation in LPS-stimulated RAW264.7 Cells. Immune Netw. 2015 Dec;15(6):325-30. doi: 10.4110/in.2015.15.6.325. Epub 2015 Dec 24. PMID: 26770187; PMCID: PMC4700409.
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Corrigendum to "MiRNA-26b regulates the expression of cyclooxygenase-2 in desferrioxamine-treated CNE cells" [FEBS Lett. 584 (5) (2010) 961-967].

FEBS letters

Ji Y, He Y, Liu L, Chong X.
PMID: 26874650
FEBS Lett. 2015 Jan 16;589(2):277. doi: 10.1016/j.febslet.2014.12.001.

No abstract available.

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Ji Y, He Y, Liu L, et al. Corrigendum to "MiRNA-26b regulates the expression of cyclooxygenase-2 in desferrioxamine-treated CNE cells" [FEBS Lett. 584 (5) (2010) 961-967]. FEBS Lett. 2015;589(2):277doi: 10.1016/j.febslet.2014.12.001.
Ji, Y., He, Y., Liu, L., & Chong, X. (2015). Corrigendum to "MiRNA-26b regulates the expression of cyclooxygenase-2 in desferrioxamine-treated CNE cells" [FEBS Lett. 584 (5) (2010) 961-967]. FEBS letters, 589(2), 277. https://doi.org/10.1016/j.febslet.2014.12.001
Ji, Yanhong, et al. "Corrigendum to "MiRNA-26b regulates the expression of cyclooxygenase-2 in desferrioxamine-treated CNE cells" [FEBS Lett. 584 (5) (2010) 961-967]." FEBS letters vol. 589,2 (2015): 277. doi: https://doi.org/10.1016/j.febslet.2014.12.001
Ji Y, He Y, Liu L, Chong X. Corrigendum to "MiRNA-26b regulates the expression of cyclooxygenase-2 in desferrioxamine-treated CNE cells" [FEBS Lett. 584 (5) (2010) 961-967]. FEBS Lett. 2015 Jan 16;589(2):277. doi: 10.1016/j.febslet.2014.12.001. PMID: 26874650.
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Virtual Dual inhibition of COX-2 / 5-LOX enzymes based on binding properties of alpha-amyrins, the anti-inflammatory compound as a promising anti-cancer drug.

EXCLI journal

Ranjbar MM, Assadolahi V, Yazdani M, Nikaein D, Rashidieh B.
PMID: 27231478
EXCLI J. 2016 Mar 23;15:238-45. doi: 10.17179/excli2016-164. eCollection 2016.

Hydro-alcoholic fruit extract of Cordia myxa was considerably effective on curing acute inflammation in mouse model. Previous studies suggested significant anti-inflammatory activities as well as potential anticancer agent of α-amyrins in seeds. Inhibition of Cyclooxygenase-2 (COX-2) and 5-Lipooxygenase (5-LOX)...

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Ranjbar MM, Assadolahi V, Yazdani M, et al. Virtual Dual inhibition of COX-2 / 5-LOX enzymes based on binding properties of alpha-amyrins, the anti-inflammatory compound as a promising anti-cancer drug. EXCLI J. 2016;15:238-45doi: 10.17179/excli2016-164.
Ranjbar, M. M., Assadolahi, V., Yazdani, M., Nikaein, D., & Rashidieh, B. (2016). Virtual Dual inhibition of COX-2 / 5-LOX enzymes based on binding properties of alpha-amyrins, the anti-inflammatory compound as a promising anti-cancer drug. EXCLI journal, 15238-45. https://doi.org/10.17179/excli2016-164
Ranjbar, Mohammad Mehdi, et al. "Virtual Dual inhibition of COX-2 / 5-LOX enzymes based on binding properties of alpha-amyrins, the anti-inflammatory compound as a promising anti-cancer drug." EXCLI journal vol. 15 (2016): 238-45. doi: https://doi.org/10.17179/excli2016-164
Ranjbar MM, Assadolahi V, Yazdani M, Nikaein D, Rashidieh B. Virtual Dual inhibition of COX-2 / 5-LOX enzymes based on binding properties of alpha-amyrins, the anti-inflammatory compound as a promising anti-cancer drug. EXCLI J. 2016 Mar 23;15:238-45. doi: 10.17179/excli2016-164. eCollection 2016. PMID: 27231478; PMCID: PMC4874318.
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The effects of increasing PGE2 on translocation of labeled albumin into rat brain.

Research in pharmaceutical sciences

Messripour M, Mesripour A, Mashayekhie FJ.
PMID: 26487895
Res Pharm Sci. 2015 Mar-Apr;10(2):177-81.

Under pathophysiological conditions, infiltration of leukocyte plays a key role in the progression of the neuroinflammatory reaction in the CNS. Prostaglandin E2 (PGE2) is known to accumulate at lesion sites of the post-ischemic brain. Although post-ischemic treatments with cyclooxygenase-2...

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Messripour M, Mesripour A, Mashayekhie FJ. The effects of increasing PGE2 on translocation of labeled albumin into rat brain. Res Pharm Sci. 2015;10(2):177-81
Messripour, M., Mesripour, A., & Mashayekhie, F. J. (2015). The effects of increasing PGE2 on translocation of labeled albumin into rat brain. Research in pharmaceutical sciences, 10(2), 177-81.
Messripour, M, et al. "The effects of increasing PGE2 on translocation of labeled albumin into rat brain." Research in pharmaceutical sciences vol. 10,2 (2015): 177-81.
Messripour M, Mesripour A, Mashayekhie FJ. The effects of increasing PGE2 on translocation of labeled albumin into rat brain. Res Pharm Sci. 2015 Mar-Apr;10(2):177-81. PMID: 26487895; PMCID: PMC4584457.
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High-Fat and Fat-Enriched Diets Impair the Benefits of Moderate Physical Training in the Aorta and the Heart in Rats.

Frontiers in nutrition

Fernandes CR, Kannen V, Mata KM, Frajacomo FT, Jordão Junior AA, Gasparotto B, Sakita JY, Elias Junior J, Leonardi DS, Mauad FM, Ramos SG, Uyemura SA, Garcia SB.
PMID: 28573134
Front Nutr. 2017 May 18;4:21. doi: 10.3389/fnut.2017.00021. eCollection 2017.

AIM: Millions of people die each year due to cardiovascular disease (CVD). A Western lifestyle not only fuses a significant intake of fat with physical inactivity and obesity but also promotes CVD. Recent evidence suggests that dietary fat intake...

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Fernandes CR, Kannen V, Mata KM, et al. High-Fat and Fat-Enriched Diets Impair the Benefits of Moderate Physical Training in the Aorta and the Heart in Rats. Front Nutr. 2017;4:21doi: 10.3389/fnut.2017.00021.
Fernandes, C. R., Kannen, V., Mata, K. M., Frajacomo, F. T., Jordão Junior, A. A., Gasparotto, B., Sakita, J. Y., Elias Junior, J., Leonardi, D. S., Mauad, F. M., Ramos, S. G., Uyemura, S. A., & Garcia, S. B. (2017). High-Fat and Fat-Enriched Diets Impair the Benefits of Moderate Physical Training in the Aorta and the Heart in Rats. Frontiers in nutrition, 421. https://doi.org/10.3389/fnut.2017.00021
Fernandes, Cleverson Rodrigues, et al. "High-Fat and Fat-Enriched Diets Impair the Benefits of Moderate Physical Training in the Aorta and the Heart in Rats." Frontiers in nutrition vol. 4 (2017): 21. doi: https://doi.org/10.3389/fnut.2017.00021
Fernandes CR, Kannen V, Mata KM, Frajacomo FT, Jordão Junior AA, Gasparotto B, Sakita JY, Elias Junior J, Leonardi DS, Mauad FM, Ramos SG, Uyemura SA, Garcia SB. High-Fat and Fat-Enriched Diets Impair the Benefits of Moderate Physical Training in the Aorta and the Heart in Rats. Front Nutr. 2017 May 18;4:21. doi: 10.3389/fnut.2017.00021. eCollection 2017. PMID: 28573134; PMCID: PMC5435813.
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Showing 1 to 12 of 1853 entries