Advanced Search
Display options
Filter resources
Text Availability
Article type
Publication date
Species
Language
Sex
Age
Showing 1 to 12 of 8748 entries
Sorted by: Best Match Show Resources per page
Rapid agarose gel electrophoretic mobility shift assay for quantitating protein: RNA interactions

Louis Stokes Alliances for Minority Participation AND Program Evaluation

[No authors listed]
GSID: Q5EPAZOZOJQJ
JA Ream, LK Lewis, KA Lewis - Analytical biochemistry, 2016 - Elsevier

Interactions between proteins and nucleic acids are frequently analyzed using electrophoretic mobility shift assays (EMSAs). This technique separates bound protein: nucleic acid complexes from free nucleic acids by electrophoresis, most commonly using polyacrylamide gels. The current study utilizes recent...

Cite
Ream, J. A., Lewis, L. K., & Lewis, K. A. (2016). Rapid agarose gel electrophoretic mobility shift assay for quantitating protein: RNA interactions. Analytical biochemistry, 511, 36-41.
Ream, Jennifer A., L. Kevin Lewis, and Karen A. Lewis. "Rapid agarose gel electrophoretic mobility shift assay for quantitating protein: RNA interactions." Analytical biochemistry 511 (2016): 36-41.
Copy Download .nbib Format: MLA
The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo

k-12

Xiao H, Burgess R, Cashel M.
GSID: HrvQSmIcxHAJ
D Gentry, H Xiao, R Burgess, M Cashel - Journal of bacteriology, 1991 - Am Soc Microbiol

Igarashi et al. (K. Igarashi, N. Fujita, and A. Ishihama, Nucleic Acids Res. 17:8755-8765, 1989) reported that the omega (omega) subunit of Escherichia coli RNA polymerase was required for stringent control as judged by in vitro transcription assays in...

Cite
Gentry, D., Xiao, H., Burgess, R., & Cashel, M. (1991). The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo. Journal of bacteriology, 173(12), 3901-3903.
Gentry, D., et al. "The omega subunit of Escherichia coli K-12 RNA polymerase is not required for stringent RNA control in vivo." Journal of bacteriology 173.12 (1991): 3901-3903.
Copy Download .nbib Format: MLA
INSPIRE Project's Bill Taylor Memorial Scholarship Recipient Fulfilling Her STEM Dreams

Centers of Research Excellence in Science and Technology (CREST) and HBCU Research Infrastructure for Science and Engineering (RISE) AND Program Evaluation

[No authors listed]
GSID: k1_9xx1DkL0J
M Brinson - … Center 2021 Spring Intern Reports on Research …, 2019 - theinspireproject.org

Benkert, P., Künzli, M., & Schwede, T.(2009). QMEAN server for protein model quality estimation. Nucleic acids research, 37. https://doi. org/10.1093/nar/gkp322 Bienert, S., Waterhouse, A., de Beer, TAP, Tauriello, G., Studer, G., Bordoli, L., Schwede, T. The SWISS-MODEL Repository-new features...

Cite
Brinson, M. (2019). INSPIRE Project’s Bill Taylor Memorial Scholarship Recipient Fulfilling Her STEM Dreams. INSPIRE’s NASA Goddard Space Flight Center 2021 Spring Intern Reports on Research Project.................. 27 Malaya Moon, 24, 5.
Brinson, Morgan. "INSPIRE Project’s Bill Taylor Memorial Scholarship Recipient Fulfilling Her STEM Dreams." INSPIRE’s NASA Goddard Space Flight Center 2021 Spring Intern Reports on Research Project.................. 27 Malaya Moon 24 (2019): 5.
Copy Download .nbib Format: MLA
Circulating nucleic acids in plasma and serum: applications in diagnostic techniques for noninvasive prenatal diagnosis.

International journal of women's health

Gahan PB.
PMID: 23637563
Int J Womens Health. 2013 Apr 17;5:177-86. doi: 10.2147/IJWH.S34442. Print 2013.

The analysis of fetal nucleic acids in maternal blood 13 years ago has led to the initiation of noninvasive methods for the early determination of fetal gender, rhesus D status, and a number of aneuploid disorders and hemoglobinopathies. Subsequently,...

Cite
Gahan PB. Circulating nucleic acids in plasma and serum: applications in diagnostic techniques for noninvasive prenatal diagnosis. Int J Womens Health. 2013;5:177-86doi: 10.2147/IJWH.S34442.
Gahan, P. B. (2013). Circulating nucleic acids in plasma and serum: applications in diagnostic techniques for noninvasive prenatal diagnosis. International journal of women's health, 5177-86. https://doi.org/10.2147/IJWH.S34442
Gahan, Peter B. "Circulating nucleic acids in plasma and serum: applications in diagnostic techniques for noninvasive prenatal diagnosis." International journal of women's health vol. 5 (2013): 177-86. doi: https://doi.org/10.2147/IJWH.S34442
Gahan PB. Circulating nucleic acids in plasma and serum: applications in diagnostic techniques for noninvasive prenatal diagnosis. Int J Womens Health. 2013 Apr 17;5:177-86. doi: 10.2147/IJWH.S34442. Print 2013. PMID: 23637563; PMCID: PMC3634397.
Copy Download .nbib Format: NLM
Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions.

Journal of nucleic acids

Saxena S, Nagatoishi S, Miyoshi D, Sugimoto N.
PMID: 22919464
J Nucleic Acids. 2012;2012:392039. doi: 10.1155/2012/392039. Epub 2012 Aug 08.

In an ATP-dependent reaction, the Escherichia coli RecG helicase unwinds DNA junctions in vitro. We present evidence of a unique protein conformational change in the RecG helicase from an α-helix to a β-strand upon an ATP binding under dilute...

Cite
Saxena S, Nagatoishi S, Miyoshi D, et al. Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions. J Nucleic Acids. 2012;2012:392039doi: 10.1155/2012/392039.
Saxena, S., Nagatoishi, S., Miyoshi, D., & Sugimoto, N. (2012). Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions. Journal of nucleic acids, 2012392039. https://doi.org/10.1155/2012/392039
Saxena, Sarika, et al. "Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions." Journal of nucleic acids vol. 2012 (2012): 392039. doi: https://doi.org/10.1155/2012/392039
Saxena S, Nagatoishi S, Miyoshi D, Sugimoto N. Structural and Functional Characterization of RecG Helicase under Dilute and Molecular Crowding Conditions. J Nucleic Acids. 2012;2012:392039. doi: 10.1155/2012/392039. Epub 2012 Aug 08. PMID: 22919464; PMCID: PMC3420092.
Copy Download .nbib Format: NLM
Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants.

Plant methods

Zhang H, Tang K, Wang B, Duan CG, Lang Z, Zhu JK.
PMID: 24955108
Plant Methods. 2014 Jun 14;10:18. doi: 10.1186/1746-4811-10-18. eCollection 2014.

BACKGROUND: DNA methylation is a conserved epigenetic mark that controls genome stability, development and environmental responses in many eukaryotes. DNA methylation can be guided by non-coding RNAs that include small interfering RNAs and scaffold RNAs. Although measurement of DNA...

Cite
Zhang H, Tang K, Wang B, et al. Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants. Plant Methods. 2014;10:18doi: 10.1186/1746-4811-10-18.
Zhang, H., Tang, K., Wang, B., Duan, C. G., Lang, Z., & Zhu, J. K. (2014). Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants. Plant methods, 1018. https://doi.org/10.1186/1746-4811-10-18
Zhang, Huiming, et al. "Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants." Plant methods vol. 10 (2014): 18. doi: https://doi.org/10.1186/1746-4811-10-18
Zhang H, Tang K, Wang B, Duan CG, Lang Z, Zhu JK. Protocol: a beginner's guide to the analysis of RNA-directed DNA methylation in plants. Plant Methods. 2014 Jun 14;10:18. doi: 10.1186/1746-4811-10-18. eCollection 2014. PMID: 24955108; PMCID: PMC4065543.
Copy Download .nbib Format: NLM
A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics.

Journal of chemical theory and computation

Dans PD, Zeida A, Machado MR, Pantano S.
PMID: 26615701
J Chem Theory Comput. 2010 May 11;6(5):1711-25. doi: 10.1021/ct900653p. Epub 2010 Apr 14.

Coarse-grain (CG) techniques allow considerable extension of the accessible size and time scales in simulations of biological systems. Although many CG representations are available for the most common biomacromolecules, very few have been reported for nucleic acids. Here, we...

Cite
Dans PD, Zeida A, Machado MR, et al. A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics. J Chem Theory Comput. 2010;6(5):1711-25doi: 10.1021/ct900653p.
Dans, P. D., Zeida, A., Machado, M. R., & Pantano, S. (2010). A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics. Journal of chemical theory and computation, 6(5), 1711-25. https://doi.org/10.1021/ct900653p
Dans, Pablo D, et al. "A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics." Journal of chemical theory and computation vol. 6,5 (2010): 1711-25. doi: https://doi.org/10.1021/ct900653p
Dans PD, Zeida A, Machado MR, Pantano S. A Coarse Grained Model for Atomic-Detailed DNA Simulations with Explicit Electrostatics. J Chem Theory Comput. 2010 May 11;6(5):1711-25. doi: 10.1021/ct900653p. Epub 2010 Apr 14. PMID: 26615701.
Copy Download .nbib Format: NLM
Extraction of total nucleic acids from bacterial isolates using the bioMérieux NucliSENS easyMAG total nucleic acid extractor.

Annals of clinical microbiology and antimicrobials

Powell EA, Mortensen JE.
PMID: 27658494
Ann Clin Microbiol Antimicrob. 2016 Sep 22;15(1):54. doi: 10.1186/s12941-016-0168-7.

The BioMerieux NucliSENS easyMAG total nucleic acid extractor was evaluated for use on bacterial isolates in the clinical microbiology laboratory. Forty eight isolates were extracted, yielding quantifiable amounts of DNA for all isolates. The easyMAG is appropriate for DNA...

Cite
Powell EA, Mortensen JE. Extraction of total nucleic acids from bacterial isolates using the bioMérieux NucliSENS easyMAG total nucleic acid extractor. Ann Clin Microbiol Antimicrob. 2016;15(1):54doi: 10.1186/s12941-016-0168-7.
Powell, E. A., & Mortensen, J. E. (2016). Extraction of total nucleic acids from bacterial isolates using the bioMérieux NucliSENS easyMAG total nucleic acid extractor. Annals of clinical microbiology and antimicrobials, 15(1), 54. https://doi.org/10.1186/s12941-016-0168-7
Powell, Eleanor A, and Mortensen, Joel E. "Extraction of total nucleic acids from bacterial isolates using the bioMérieux NucliSENS easyMAG total nucleic acid extractor." Annals of clinical microbiology and antimicrobials vol. 15,1 (2016): 54. doi: https://doi.org/10.1186/s12941-016-0168-7
Powell EA, Mortensen JE. Extraction of total nucleic acids from bacterial isolates using the bioMérieux NucliSENS easyMAG total nucleic acid extractor. Ann Clin Microbiol Antimicrob. 2016 Sep 22;15(1):54. doi: 10.1186/s12941-016-0168-7. PMID: 27658494; PMCID: PMC5034424.
Copy Download .nbib Format: NLM
The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans.

Nucleic acids research

Wells GR, Weichmann F, Colvin D, Sloan KE, Kudla G, Tollervey D, Watkins NJ, Schneider C.
PMID: 27034467
Nucleic Acids Res. 2016 Jun 20;44(11):5399-409. doi: 10.1093/nar/gkw213. Epub 2016 Mar 31.

During ribosomal RNA (rRNA) maturation, cleavages at defined sites separate the mature rRNAs from spacer regions, but the identities of several enzymes required for 18S rRNA release remain unknown. PilT N-terminus (PIN) domain proteins are frequently endonucleases and the...

Cite
Wells GR, Weichmann F, Colvin D, et al. The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans. Nucleic Acids Res. 2016;44(11):5399-409doi: 10.1093/nar/gkw213.
Wells, G. R., Weichmann, F., Colvin, D., Sloan, K. E., Kudla, G., Tollervey, D., Watkins, N. J., & Schneider, C. (2016). The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans. Nucleic acids research, 44(11), 5399-409. https://doi.org/10.1093/nar/gkw213
Wells, Graeme R, et al. "The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans." Nucleic acids research vol. 44,11 (2016): 5399-409. doi: https://doi.org/10.1093/nar/gkw213
Wells GR, Weichmann F, Colvin D, Sloan KE, Kudla G, Tollervey D, Watkins NJ, Schneider C. The PIN domain endonuclease Utp24 cleaves pre-ribosomal RNA at two coupled sites in yeast and humans. Nucleic Acids Res. 2016 Jun 20;44(11):5399-409. doi: 10.1093/nar/gkw213. Epub 2016 Mar 31. PMID: 27034467; PMCID: PMC4914098.
Copy Download .nbib Format: NLM
DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides.

Nucleic acids research

Pirtskhalava M, Gabrielian A, Cruz P, Griggs HL, Squires RB, Hurt DE, Grigolava M, Chubinidze M, Gogoladze G, Vishnepolsky B, Alekseyev V, Rosenthal A, Tartakovsky M.
PMID: 27060142
Nucleic Acids Res. 2016 Jul 27;44(13):6503. doi: 10.1093/nar/gkw243. Epub 2016 Apr 08.

No abstract available.

Cite
Pirtskhalava M, Gabrielian A, Cruz P, et al. DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides. Nucleic Acids Res. 2016;44(13):6503doi: 10.1093/nar/gkw243.
Pirtskhalava, M., Gabrielian, A., Cruz, P., Griggs, H. L., Squires, R. B., Hurt, D. E., Grigolava, M., Chubinidze, M., Gogoladze, G., Vishnepolsky, B., Alekseyev, V., Rosenthal, A., & Tartakovsky, M. (2016). DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides. Nucleic acids research, 44(13), 6503. https://doi.org/10.1093/nar/gkw243
Pirtskhalava, Malak, et al. "DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides." Nucleic acids research vol. 44,13 (2016): 6503. doi: https://doi.org/10.1093/nar/gkw243
Pirtskhalava M, Gabrielian A, Cruz P, Griggs HL, Squires RB, Hurt DE, Grigolava M, Chubinidze M, Gogoladze G, Vishnepolsky B, Alekseyev V, Rosenthal A, Tartakovsky M. DBAASP v.2: an enhanced database of structure and antimicrobial/cytotoxic activity of natural and synthetic peptides. Nucleic Acids Res. 2016 Jul 27;44(13):6503. doi: 10.1093/nar/gkw243. Epub 2016 Apr 08. PMID: 27060142; PMCID: PMC4994862.
Copy Download .nbib Format: NLM
Circulating microRNAs in patients with hormone receptor-positive, metastatic breast cancer treated with dovitinib.

Clinical and translational medicine

Shivapurkar N, Vietsch EE, Carney E, Isaacs C, Wellstein A.
PMID: 28980224
Clin Transl Med. 2017 Oct 04;6(1):37. doi: 10.1186/s40169-017-0169-y.

BACKGROUND: Serial analysis of biomarkers in the circulation of patients undergoing treatment ("liquid biopsies") can provide new insights into drug effects. In particular the analysis of cell-free, circulating nucleic acids such as microRNAs (miRs) can reveal altered expression patterns...

Cite
Shivapurkar N, Vietsch EE, Carney E, et al. Circulating microRNAs in patients with hormone receptor-positive, metastatic breast cancer treated with dovitinib. Clin Transl Med. 2017;6(1):37doi: 10.1186/s40169-017-0169-y.
Shivapurkar, N., Vietsch, E. E., Carney, E., Isaacs, C., & Wellstein, A. (2017). Circulating microRNAs in patients with hormone receptor-positive, metastatic breast cancer treated with dovitinib. Clinical and translational medicine, 6(1), 37. https://doi.org/10.1186/s40169-017-0169-y
Shivapurkar, Narayan, et al. "Circulating microRNAs in patients with hormone receptor-positive, metastatic breast cancer treated with dovitinib." Clinical and translational medicine vol. 6,1 (2017): 37. doi: https://doi.org/10.1186/s40169-017-0169-y
Shivapurkar N, Vietsch EE, Carney E, Isaacs C, Wellstein A. Circulating microRNAs in patients with hormone receptor-positive, metastatic breast cancer treated with dovitinib. Clin Transl Med. 2017 Oct 04;6(1):37. doi: 10.1186/s40169-017-0169-y. PMID: 28980224; PMCID: PMC5628092.
Copy Download .nbib Format: NLM
Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry.

Nucleic acids research

Wang YR, Chen SF, Wu CC, Liao YW, Lin TS, Liu KT, Chen YS, Li TK, Chien TC, Chan NL.
PMID: 28977544
Nucleic Acids Res. 2017 Oct 13;45(18):10920. doi: 10.1093/nar/gkx806.

No abstract available.

Cite
Wang YR, Chen SF, Wu CC, et al. Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry. Nucleic Acids Res. 2017;45(18):10920doi: 10.1093/nar/gkx806.
Wang, Y. R., Chen, S. F., Wu, C. C., Liao, Y. W., Lin, T. S., Liu, K. T., Chen, Y. S., Li, T. K., Chien, T. C., & Chan, N. L. (2017). Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry. Nucleic acids research, 45(18), 10920. https://doi.org/10.1093/nar/gkx806
Wang, Ying-Ren, et al. "Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry." Nucleic acids research vol. 45,18 (2017): 10920. doi: https://doi.org/10.1093/nar/gkx806
Wang YR, Chen SF, Wu CC, Liao YW, Lin TS, Liu KT, Chen YS, Li TK, Chien TC, Chan NL. Producing irreversible topoisomerase II-mediated DNA breaks by site-specific Pt(II)-methionine coordination chemistry. Nucleic Acids Res. 2017 Oct 13;45(18):10920. doi: 10.1093/nar/gkx806. PMID: 28977544; PMCID: PMC5737763.
Copy Download .nbib Format: NLM
Showing 1 to 12 of 8748 entries