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Showing 1 to 12 of 116 entries
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Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder.

Frontiers in physiology

Hartmann P, Lang S, Zeng S, Duan Y, Zhang X, Wang Y, Bondareva M, Kruglov A, Fouts DE, Stärkel P, Schnabl B.
PMID: 34349667
Front Physiol. 2021 Jul 19;12:699253. doi: 10.3389/fphys.2021.699253. eCollection 2021.

BACKGROUND: Alcohol-associated liver disease (ALD) is an important cause of morbidity and mortality worldwide. The intestinal microbiota is involved in the development and progression of ALD; however, little is known about commensal fungi therein.METHODS: We studied the dynamic changes...

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Hartmann P, Lang S, Zeng S, et al. Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder. Front Physiol. 2021;12:699253doi: 10.3389/fphys.2021.699253.
Hartmann, P., Lang, S., Zeng, S., Duan, Y., Zhang, X., Wang, Y., Bondareva, M., Kruglov, A., Fouts, D. E., Stärkel, P., & Schnabl, B. (2021). Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder. Frontiers in physiology, 12699253. https://doi.org/10.3389/fphys.2021.699253
Hartmann, Phillipp, et al. "Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder." Frontiers in physiology vol. 12 (2021): 699253. doi: https://doi.org/10.3389/fphys.2021.699253
Hartmann P, Lang S, Zeng S, Duan Y, Zhang X, Wang Y, Bondareva M, Kruglov A, Fouts DE, Stärkel P, Schnabl B. Dynamic Changes of the Fungal Microbiome in Alcohol Use Disorder. Front Physiol. 2021 Jul 19;12:699253. doi: 10.3389/fphys.2021.699253. eCollection 2021. PMID: 34349667; PMCID: PMC8327211.
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Disease Activity Indices for Pouchitis: A Systematic Review.

Inflammatory bowel diseases

Sedano R, Nguyen TM, Almradi A, Rieder F, Parker CE, Shackelton LM, D'Haens G, Sandborn WJ, Feagan BG, Ma C, Jairath V.
PMID: 34180986
Inflamm Bowel Dis. 2021 Jun 28; doi: 10.1093/ibd/izab124. Epub 2021 Jun 28.

BACKGROUND: Several indices exist to measure pouchitis disease activity; however, none are fully validated. As an initial step toward creating a validated instrument, we identified pouchitis disease activity indices, examined their operating properties, and assessed their value as outcome...

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Sedano R, Nguyen TM, Almradi A, et al. Disease Activity Indices for Pouchitis: A Systematic Review. Inflamm Bowel Dis. 2021;doi: 10.1093/ibd/izab124.
Sedano, R., Nguyen, T. M., Almradi, A., Rieder, F., Parker, C. E., Shackelton, L. M., D'Haens, G., Sandborn, W. J., Feagan, B. G., Ma, C., & Jairath, V. (2021). Disease Activity Indices for Pouchitis: A Systematic Review. Inflammatory bowel diseases, . https://doi.org/10.1093/ibd/izab124
Sedano, Rocio, et al. "Disease Activity Indices for Pouchitis: A Systematic Review." Inflammatory bowel diseases vol. (2021). doi: https://doi.org/10.1093/ibd/izab124
Sedano R, Nguyen TM, Almradi A, Rieder F, Parker CE, Shackelton LM, D'Haens G, Sandborn WJ, Feagan BG, Ma C, Jairath V. Disease Activity Indices for Pouchitis: A Systematic Review. Inflamm Bowel Dis. 2021 Jun 28; doi: 10.1093/ibd/izab124. Epub 2021 Jun 28. PMID: 34180986.
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Vitamin D Levels May Predict Response to Vedolizumab.

Journal of Crohn's & colitis

Bamias G, Rivera-Nieves J.
PMID: 34185075
J Crohns Colitis. 2021 Jun 29; doi: 10.1093/ecco-jcc/jjab105. Epub 2021 Jun 29.

No abstract available.

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Bamias G, Rivera-Nieves J. Vitamin D Levels May Predict Response to Vedolizumab. J Crohns Colitis. 2021;doi: 10.1093/ecco-jcc/jjab105.
Bamias, G., & Rivera-Nieves, J. (2021). Vitamin D Levels May Predict Response to Vedolizumab. Journal of Crohn's & colitis, . https://doi.org/10.1093/ecco-jcc/jjab105
Bamias, Giorgos, and Rivera-Nieves, Jesús. "Vitamin D Levels May Predict Response to Vedolizumab." Journal of Crohn's & colitis vol. (2021). doi: https://doi.org/10.1093/ecco-jcc/jjab105
Bamias G, Rivera-Nieves J. Vitamin D Levels May Predict Response to Vedolizumab. J Crohns Colitis. 2021 Jun 29; doi: 10.1093/ecco-jcc/jjab105. Epub 2021 Jun 29. PMID: 34185075.
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Emerging Role of Genomic Analysis in Clinical Evaluation of Lean Individuals With NAFLD.

Hepatology (Baltimore, Md.)

Vilarinho S, Ajmera V, Zheng M, Loomba R.
PMID: 34233030
Hepatology. 2021 Oct;74(4):2241-2250. doi: 10.1002/hep.32047.

No abstract available.

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Vilarinho S, Ajmera V, Zheng M, et al. Emerging Role of Genomic Analysis in Clinical Evaluation of Lean Individuals With NAFLD. Hepatology. 2021;74(4):2241-2250doi: 10.1002/hep.32047.
Vilarinho, S., Ajmera, V., Zheng, M., & Loomba, R. (2021). Emerging Role of Genomic Analysis in Clinical Evaluation of Lean Individuals With NAFLD. Hepatology (Baltimore, Md.), 74(4), 2241-2250. https://doi.org/10.1002/hep.32047
Vilarinho, Sílvia, et al. "Emerging Role of Genomic Analysis in Clinical Evaluation of Lean Individuals With NAFLD." Hepatology (Baltimore, Md.) vol. 74,4 (2021): 2241-2250. doi: https://doi.org/10.1002/hep.32047
Vilarinho S, Ajmera V, Zheng M, Loomba R. Emerging Role of Genomic Analysis in Clinical Evaluation of Lean Individuals With NAFLD. Hepatology. 2021 Oct;74(4):2241-2250. doi: 10.1002/hep.32047. PMID: 34233030; PMCID: PMC8463418.
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Links between gut microbiome composition and fatty liver disease in a large population sample.

Gut microbes

Ruuskanen MO, Åberg F, Männistö V, Havulinna AS, Méric G, Liu Y, Loomba R, Vázquez-Baeza Y, Tripathi A, Valsta LM, Inouye M, Jousilahti P, Salomaa V, Jain M, Knight R, Lahti L, Niiranen TJ.
PMID: 33651661
Gut Microbes. 2021 Jan-Dec;13(1):1-22. doi: 10.1080/19490976.2021.1888673.

Fatty liver disease is the most common liver disease in the world. Its connection with the gut microbiome has been known for at least 80 y, but this association remains mostly unstudied in the general population because of underdiagnosis...

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Ruuskanen MO, Åberg F, Männistö V, et al. Links between gut microbiome composition and fatty liver disease in a large population sample. Gut Microbes. 2021;13(1):1-22doi: 10.1080/19490976.2021.1888673.
Ruuskanen, M. O., Åberg, F., Männistö, V., Havulinna, A. S., Méric, G., Liu, Y., Loomba, R., Vázquez-Baeza, Y., Tripathi, A., Valsta, L. M., Inouye, M., Jousilahti, P., Salomaa, V., Jain, M., Knight, R., Lahti, L., & Niiranen, T. J. (2021). Links between gut microbiome composition and fatty liver disease in a large population sample. Gut microbes, 13(1), 1-22. https://doi.org/10.1080/19490976.2021.1888673
Ruuskanen, Matti O, et al. "Links between gut microbiome composition and fatty liver disease in a large population sample." Gut microbes vol. 13,1 (2021): 1-22. doi: https://doi.org/10.1080/19490976.2021.1888673
Ruuskanen MO, Åberg F, Männistö V, Havulinna AS, Méric G, Liu Y, Loomba R, Vázquez-Baeza Y, Tripathi A, Valsta LM, Inouye M, Jousilahti P, Salomaa V, Jain M, Knight R, Lahti L, Niiranen TJ. Links between gut microbiome composition and fatty liver disease in a large population sample. Gut Microbes. 2021 Jan-Dec;13(1):1-22. doi: 10.1080/19490976.2021.1888673. PMID: 33651661; PMCID: PMC7928040.
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Class Ib MHC-Mediated Immune Interactions Play a Critical Role in Maintaining Mucosal Homeostasis in the Mammalian Large Intestine.

ImmunoHorizons

Dasgupta S, Maricic I, Tang J, Wandro S, Weldon K, Carpenter CS, Eckmann L, Rivera-Nieves J, Sandborn W, Knight R, Dorrestein P, Swafford AD, Kumar V.
PMID: 34911745
Immunohorizons. 2021 Dec 15;5(12):953-971. doi: 10.4049/immunohorizons.2100090.

Lymphocytes within the intestinal epithelial layer (IEL) in mammals have unique composition compared with their counterparts in the lamina propria. Little is known about the role of some of the key colonic IEL subsets, such as TCRαβ

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Dasgupta S, Maricic I, Tang J, et al. Class Ib MHC-Mediated Immune Interactions Play a Critical Role in Maintaining Mucosal Homeostasis in the Mammalian Large Intestine. Immunohorizons. 2021;5(12):953-971doi: 10.4049/immunohorizons.2100090.
Dasgupta, S., Maricic, I., Tang, J., Wandro, S., Weldon, K., Carpenter, C. S., Eckmann, L., Rivera-Nieves, J., Sandborn, W., Knight, R., Dorrestein, P., Swafford, A. D., & Kumar, V. (2021). Class Ib MHC-Mediated Immune Interactions Play a Critical Role in Maintaining Mucosal Homeostasis in the Mammalian Large Intestine. ImmunoHorizons, 5(12), 953-971. https://doi.org/10.4049/immunohorizons.2100090
Dasgupta, Suryasarathi, et al. "Class Ib MHC-Mediated Immune Interactions Play a Critical Role in Maintaining Mucosal Homeostasis in the Mammalian Large Intestine." ImmunoHorizons vol. 5,12 (2021): 953-971. doi: https://doi.org/10.4049/immunohorizons.2100090
Dasgupta S, Maricic I, Tang J, Wandro S, Weldon K, Carpenter CS, Eckmann L, Rivera-Nieves J, Sandborn W, Knight R, Dorrestein P, Swafford AD, Kumar V. Class Ib MHC-Mediated Immune Interactions Play a Critical Role in Maintaining Mucosal Homeostasis in the Mammalian Large Intestine. Immunohorizons. 2021 Dec 15;5(12):953-971. doi: 10.4049/immunohorizons.2100090. PMID: 34911745.
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Heterogeneity of HSCs in a Mouse Model of NASH.

Hepatology (Baltimore, Md.)

Rosenthal SB, Liu X, Ganguly S, Dhar D, Pasillas MP, Ricciardelli E, Li RZ, Troutman TD, Kisseleva T, Glass CK, Brenner DA.
PMID: 33550587
Hepatology. 2021 Aug;74(2):667-685. doi: 10.1002/hep.31743. Epub 2021 Aug 10.

BACKGROUND AND AIMS: In clinical and experimental NASH, the origin of the scar-forming myofibroblast is the HSC. We used foz/foz mice on a Western diet to characterize in detail the phenotypic changes of HSCs in a NASH model.APPROACH AND...

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Rosenthal SB, Liu X, Ganguly S, et al. Heterogeneity of HSCs in a Mouse Model of NASH. Hepatology. 2021;74(2):667-685doi: 10.1002/hep.31743.
Rosenthal, S. B., Liu, X., Ganguly, S., Dhar, D., Pasillas, M. P., Ricciardelli, E., Li, R. Z., Troutman, T. D., Kisseleva, T., Glass, C. K., & Brenner, D. A. (2021). Heterogeneity of HSCs in a Mouse Model of NASH. Hepatology (Baltimore, Md.), 74(2), 667-685. https://doi.org/10.1002/hep.31743
Rosenthal, Sara Brin, et al. "Heterogeneity of HSCs in a Mouse Model of NASH." Hepatology (Baltimore, Md.) vol. 74,2 (2021): 667-685. doi: https://doi.org/10.1002/hep.31743
Rosenthal SB, Liu X, Ganguly S, Dhar D, Pasillas MP, Ricciardelli E, Li RZ, Troutman TD, Kisseleva T, Glass CK, Brenner DA. Heterogeneity of HSCs in a Mouse Model of NASH. Hepatology. 2021 Aug;74(2):667-685. doi: 10.1002/hep.31743. Epub 2021 Aug 10. PMID: 33550587; PMCID: PMC8346581.
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Vitamin D Levels May Predict Response to Vedolizumab.

Journal of Crohn's & colitis

Bamias G, Rivera-Nieves J.
PMID: 34185075
J Crohns Colitis. 2021 Dec 18;15(12):1978-1979. doi: 10.1093/ecco-jcc/jjab105.

No abstract available.

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Bamias G, Rivera-Nieves J. Vitamin D Levels May Predict Response to Vedolizumab. J Crohns Colitis. 2021;15(12):1978-1979doi: 10.1093/ecco-jcc/jjab105.
Bamias, G., & Rivera-Nieves, J. (2021). Vitamin D Levels May Predict Response to Vedolizumab. Journal of Crohn's & colitis, 15(12), 1978-1979. https://doi.org/10.1093/ecco-jcc/jjab105
Bamias, Giorgos, and Rivera-Nieves, Jesús. "Vitamin D Levels May Predict Response to Vedolizumab." Journal of Crohn's & colitis vol. 15,12 (2021): 1978-1979. doi: https://doi.org/10.1093/ecco-jcc/jjab105
Bamias G, Rivera-Nieves J. Vitamin D Levels May Predict Response to Vedolizumab. J Crohns Colitis. 2021 Dec 18;15(12):1978-1979. doi: 10.1093/ecco-jcc/jjab105. PMID: 34185075; PMCID: PMC8684447.
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Comprehensive characterization of purine and pyrimidine transport activities in Trichomonas vaginalis and functional cloning of a trichomonad nucleoside transporter.

Molecular microbiology

Natto MJ, Miyamoto Y, Munday JC, AlSiari TA, Al-Salabi MI, Quashie NB, Eze AA, Eckmann L, De Koning HP.
PMID: 34738285
Mol Microbiol. 2021 Dec;116(6):1489-1511. doi: 10.1111/mmi.14840. Epub 2021 Nov 20.

Trichomoniasis is a common and widespread sexually-transmitted infection, caused by the protozoan parasite Trichomonas vaginalis. T. vaginalis lacks the biosynthetic pathways for purines and pyrimidines, making nucleoside metabolism a drug target. Here we report the first comprehensive investigation into...

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Natto MJ, Miyamoto Y, Munday JC, et al. Comprehensive characterization of purine and pyrimidine transport activities in Trichomonas vaginalis and functional cloning of a trichomonad nucleoside transporter. Mol Microbiol. 2021;116(6):1489-1511doi: 10.1111/mmi.14840.
Natto, M. J., Miyamoto, Y., Munday, J. C., AlSiari, T. A., Al-Salabi, M. I., Quashie, N. B., Eze, A. A., Eckmann, L., & De Koning, H. P. (2021). Comprehensive characterization of purine and pyrimidine transport activities in Trichomonas vaginalis and functional cloning of a trichomonad nucleoside transporter. Molecular microbiology, 116(6), 1489-1511. https://doi.org/10.1111/mmi.14840
Natto, Manal J, et al. "Comprehensive characterization of purine and pyrimidine transport activities in Trichomonas vaginalis and functional cloning of a trichomonad nucleoside transporter." Molecular microbiology vol. 116,6 (2021): 1489-1511. doi: https://doi.org/10.1111/mmi.14840
Natto MJ, Miyamoto Y, Munday JC, AlSiari TA, Al-Salabi MI, Quashie NB, Eze AA, Eckmann L, De Koning HP. Comprehensive characterization of purine and pyrimidine transport activities in Trichomonas vaginalis and functional cloning of a trichomonad nucleoside transporter. Mol Microbiol. 2021 Dec;116(6):1489-1511. doi: 10.1111/mmi.14840. Epub 2021 Nov 20. PMID: 34738285.
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Aryl Hydrocarbon Receptor Deficiency in Intestinal Epithelial Cells Aggravates Alcohol-Related Liver Disease.

Cellular and molecular gastroenterology and hepatology

Qian M, Liu J, Zhao D, Cai P, Pan C, Jia W, Gao Y, Zhang Y, Zhang N, Zhang Y, Zhang Q, Wu D, Shan C, Zhang M, Schnabl B, Yang S, Shen X, Wang L.
PMID: 34454169
Cell Mol Gastroenterol Hepatol. 2022;13(1):233-256. doi: 10.1016/j.jcmgh.2021.08.014. Epub 2021 Aug 25.

BACKGROUND & AIMS: The ligand-activated transcription factor, aryl hydrocarbon receptor (AHR) can sense xenobiotics, dietary, microbial, and metabolic cues. Roles of Ahr in intestinal epithelial cells (IECs) have been much less elucidated compared with those in intestinal innate immune...

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Qian M, Liu J, Zhao D, et al. Aryl Hydrocarbon Receptor Deficiency in Intestinal Epithelial Cells Aggravates Alcohol-Related Liver Disease. Cell Mol Gastroenterol Hepatol. 2021;13(1):233-256doi: 10.1016/j.jcmgh.2021.08.014.
Qian, M., Liu, J., Zhao, D., Cai, P., Pan, C., Jia, W., Gao, Y., Zhang, Y., Zhang, N., Zhang, Y., Zhang, Q., Wu, D., Shan, C., Zhang, M., Schnabl, B., Yang, S., Shen, X., & Wang, L. (2022). Aryl Hydrocarbon Receptor Deficiency in Intestinal Epithelial Cells Aggravates Alcohol-Related Liver Disease. Cellular and molecular gastroenterology and hepatology, 13(1), 233-256. https://doi.org/10.1016/j.jcmgh.2021.08.014
Qian, Minyi, et al. "Aryl Hydrocarbon Receptor Deficiency in Intestinal Epithelial Cells Aggravates Alcohol-Related Liver Disease." Cellular and molecular gastroenterology and hepatology vol. 13,1 (2022): 233-256. doi: https://doi.org/10.1016/j.jcmgh.2021.08.014
Qian M, Liu J, Zhao D, Cai P, Pan C, Jia W, Gao Y, Zhang Y, Zhang N, Zhang Y, Zhang Q, Wu D, Shan C, Zhang M, Schnabl B, Yang S, Shen X, Wang L. Aryl Hydrocarbon Receptor Deficiency in Intestinal Epithelial Cells Aggravates Alcohol-Related Liver Disease. Cell Mol Gastroenterol Hepatol. 2022;13(1):233-256. doi: 10.1016/j.jcmgh.2021.08.014. Epub 2021 Aug 25. PMID: 34454169; PMCID: PMC8599170.
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Multicenter Analysis of Liver Injury Patterns and Mortality in COVID-19.

Frontiers in medicine

Chu H, Bai T, Chen L, Hu L, Xiao L, Yao L, Zhu R, Niu X, Li Z, Zhang L, Han C, Song S, He Q, Zhao Y, Zhu Q, Chen H, Schnabl B, Yang L, Hou X.
PMID: 33195339
Front Med (Lausanne). 2020 Oct 20;7:584342. doi: 10.3389/fmed.2020.584342. eCollection 2020.

No abstract available.

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Chu H, Bai T, Chen L, et al. Multicenter Analysis of Liver Injury Patterns and Mortality in COVID-19. Front Med (Lausanne). 2020;7:584342doi: 10.3389/fmed.2020.584342.
Chu, H., Bai, T., Chen, L., Hu, L., Xiao, L., Yao, L., Zhu, R., Niu, X., Li, Z., Zhang, L., Han, C., Song, S., He, Q., Zhao, Y., Zhu, Q., Chen, H., Schnabl, B., Yang, L., & Hou, X. (2020). Multicenter Analysis of Liver Injury Patterns and Mortality in COVID-19. Frontiers in medicine, 7584342. https://doi.org/10.3389/fmed.2020.584342
Chu, Huikuan, et al. "Multicenter Analysis of Liver Injury Patterns and Mortality in COVID-19." Frontiers in medicine vol. 7 (2020): 584342. doi: https://doi.org/10.3389/fmed.2020.584342
Chu H, Bai T, Chen L, Hu L, Xiao L, Yao L, Zhu R, Niu X, Li Z, Zhang L, Han C, Song S, He Q, Zhao Y, Zhu Q, Chen H, Schnabl B, Yang L, Hou X. Multicenter Analysis of Liver Injury Patterns and Mortality in COVID-19. Front Med (Lausanne). 2020 Oct 20;7:584342. doi: 10.3389/fmed.2020.584342. eCollection 2020. PMID: 33195339; PMCID: PMC7606271.
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Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome.

Frontiers in physiology

Xue J, Allaband C, Zhou D, Poulsen O, Martino C, Jiang L, Tripathi A, Elijah E, Dorrestein PC, Knight R, Zarrinpar A, Haddad GG.
PMID: 33897472
Front Physiol. 2021 Apr 08;12:663950. doi: 10.3389/fphys.2021.663950. eCollection 2021.

Obstructive sleep apnea (OSA), a common sleep disorder characterized by intermittent hypoxia and hypercapnia (IHC), increases atherosclerosis risk. However, the contribution of intermittent hypoxia (IH) or intermittent hypercapnia (IC) in promoting atherosclerosis remains unclear. Since gut microbiota and metabolites...

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Xue J, Allaband C, Zhou D, et al. Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome. Front Physiol. 2021;12:663950doi: 10.3389/fphys.2021.663950.
Xue, J., Allaband, C., Zhou, D., Poulsen, O., Martino, C., Jiang, L., Tripathi, A., Elijah, E., Dorrestein, P. C., Knight, R., Zarrinpar, A., & Haddad, G. G. (2021). Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome. Frontiers in physiology, 12663950. https://doi.org/10.3389/fphys.2021.663950
Xue, Jin, et al. "Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome." Frontiers in physiology vol. 12 (2021): 663950. doi: https://doi.org/10.3389/fphys.2021.663950
Xue J, Allaband C, Zhou D, Poulsen O, Martino C, Jiang L, Tripathi A, Elijah E, Dorrestein PC, Knight R, Zarrinpar A, Haddad GG. Influence of Intermittent Hypoxia/Hypercapnia on Atherosclerosis, Gut Microbiome, and Metabolome. Front Physiol. 2021 Apr 08;12:663950. doi: 10.3389/fphys.2021.663950. eCollection 2021. PMID: 33897472; PMCID: PMC8060652.
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Showing 1 to 12 of 116 entries