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Satterlee JS, Beckel-Mitchener A, Little R, et al. Neuroepigenomics: Resources, Obstacles, and Opportunities. Neuroepigenetics. 2015;1:2-13doi: 10.1016/j.nepig.2014.10.001.
Satterlee, J. S., Beckel-Mitchener, A., Little, R., Procaccini, D., Rutter, J. L., & Lossie, A. C. (2015). Neuroepigenomics: Resources, Obstacles, and Opportunities. Neuroepigenetics, 12-13. https://doi.org/10.1016/j.nepig.2014.10.001
Satterlee, John S, et al. "Neuroepigenomics: Resources, Obstacles, and Opportunities." Neuroepigenetics vol. 1 (2015): 2-13. doi: https://doi.org/10.1016/j.nepig.2014.10.001
Satterlee JS, Beckel-Mitchener A, Little R, Procaccini D, Rutter JL, Lossie AC. Neuroepigenomics: Resources, Obstacles, and Opportunities. Neuroepigenetics. 2015 Jan 01;1:2-13. doi: 10.1016/j.nepig.2014.10.001. PMID: 25722961; PMCID: PMC4337407.
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Neuroepigenetics. 2015 Jan 01;1:2-13. doi: 10.1016/j.nepig.2014.10.001.

Neuroepigenomics: Resources, Obstacles, and Opportunities.

Neuroepigenetics

John S Satterlee, Andrea Beckel-Mitchener, Roger Little, Dena Procaccini, Joni L Rutter, Amy C Lossie

Affiliations

  1. National Institute on Drug Abuse (NIDA), Division of Basic Neurobiology and Behavioral Research, 6001 Executive Boulevard, Bethesda, MD 20850, USA.
  2. National Institute on Mental Health (NIMH), Division of Neuroscience and Basic Behavioral Science, 6001 Executive Boulevard Bethesda, MD 20892-9641, USA.
  3. Office of Behavioral and Social Sciences Research (OBSSR), Division of Program Coordination, Planning, and Strategic Initiatives, Office of the Director/National Institutes of Health (NIH), 31 Center Drive, Bethesda, MD 20892, USA.

PMID: 25722961 PMCID: PMC4337407 DOI: 10.1016/j.nepig.2014.10.001

Abstract

Long-lived post-mitotic cells, such as the majority of human neurons, must respond effectively to ongoing changes in neuronal stimulation or microenvironmental cues through transcriptional and epigenomic regulation of gene expression. The role of epigenomic regulation in neuronal function is of fundamental interest to the neuroscience community, as these types of studies have transformed our understanding of gene regulation in post-mitotic cells. This perspective article highlights many of the resources available to researchers interested in neuroepigenomic investigations and discusses some of the current obstacles and opportunities in neuroepigenomics.

References

  1. Neuropharmacology. 2014 Jan;76 Pt B:259-68 - PubMed
  2. Neuroscience. 2014 Apr 4;264:198-206 - PubMed
  3. Biol Psychiatry. 2010 Jan 1;67(1):36-43 - PubMed
  4. Nature. 2014 Nov 27;515(7528):582-6 - PubMed
  5. Nat Neurosci. 2013 Jan;16(1):42-7 - PubMed
  6. Learn Mem. 2013 Jan 15;20(2):61-74 - PubMed
  7. PLoS One. 2008;3(11):e3745 - PubMed
  8. Schizophr Bull. 2009 Nov;35(6):1045-56 - PubMed
  9. Cell. 2013 Nov 7;155(4):934-47 - PubMed
  10. Proc Natl Acad Sci U S A. 2012 Jun 5;109 (23 ):9143-8 - PubMed
  11. Am J Med Genet A. 2008 Aug 15;146A(16):2041-52 - PubMed
  12. Nature. 2011 Oct 26;478(7370):483-9 - PubMed
  13. Neuropsychopharmacology. 2014 May;39(6):1315-23 - PubMed
  14. Cell. 2010 Dec 23;143(7):1084-96 - PubMed
  15. Annu Rev Genomics Hum Genet. 2008;9:233-57 - PubMed
  16. Mol Cell Biol. 2012 Oct;32(20):4215-25 - PubMed
  17. Nat Biotechnol. 2010 May;28(5):521-6 - PubMed
  18. F1000Prime Rep. 2014 Feb 03;6:8 - PubMed
  19. Neurosci Lett. 2013 Aug 29;550:119-24 - PubMed
  20. Neuropsychopharmacology. 2013 Jan;38(1):111-23 - PubMed
  21. Neuron. 2013 Oct 30;80(3):588-601 - PubMed
  22. Curr Genomics. 2012 Sep;13(6):477-88 - PubMed
  23. Nature. 2014 Jun 26;510(7506):537-41 - PubMed
  24. Biol Psychiatry. 2013 Jan 1;73(1):44-53 - PubMed
  25. Cell. 2013 Jan 31;152(3):642-54 - PubMed
  26. Nat Neurosci. 2013 May;16(5):552-61 - PubMed
  27. Trends Neurosci. 2014 Feb;37(2):106-23 - PubMed
  28. Science. 2013 Aug 9;341(6146):1237905 - PubMed
  29. Proc Natl Acad Sci U S A. 2011 Feb 15;108(7):3035-40 - PubMed
  30. Neuroimage. 2013 Jan 1;64:630-9 - PubMed
  31. Front Physiol. 2012 Jun 27;3:228 - PubMed
  32. J Comp Neurol. 2010 Oct 1;518(19):3981-4000 - PubMed
  33. Nat Methods. 2012 Feb 05;9(3):270-2 - PubMed
  34. Cell Tissue Bank. 2011 Nov;12(4):311-8 - PubMed
  35. Cell Tissue Bank. 2012 Dec;13(4):597-606 - PubMed
  36. Am J Hum Genet. 2011 Oct 7;89(4):551-63 - PubMed
  37. Nat Biotechnol. 2010 Oct;28(10):1045-8 - PubMed
  38. Epigenetics. 2013 Jul;8(7):756-64 - PubMed
  39. Nat Biotechnol. 2009 Apr;27(4):353-60 - PubMed
  40. Cell. 1992 Apr 3;69(1):41-53 - PubMed
  41. Proc Natl Acad Sci U S A. 2012 May 29;109(22):8477-82 - PubMed
  42. J Biol Chem. 2012 Feb 3;287(6):3842-9 - PubMed
  43. Nature. 2013 Aug 22;500(7463):472-6 - PubMed
  44. Annu Rev Neurosci. 2011;34:389-412 - PubMed
  45. Nat Methods. 2014 Aug;11(8):817-20 - PubMed
  46. Semin Cancer Biol. 2014 Oct;28:31-8 - PubMed
  47. Nature. 2010 Nov 18;468(7322):443-6 - PubMed
  48. Nature. 2014 Apr 10;508(7495):199-206 - PubMed
  49. Cell. 2007 Jul 13;130(1):77-88 - PubMed
  50. Am J Hum Genet. 1994 May;54(5):741-7 - PubMed
  51. Neuropsychopharmacology. 2010 Mar;35(4):870-80 - PubMed
  52. Science. 2014 Jun 20;344(6190):1396-401 - PubMed
  53. Nature. 2014 Jun 19;510(7505):363-9 - PubMed
  54. Neurotherapeutics. 2007 Jan;4(1):130-7 - PubMed
  55. Cell. 2014 Jan 16;156(1-2):261-76 - PubMed
  56. Carcinogenesis. 2010 Jan;31(1):27-36 - PubMed
  57. Nature. 2014 Apr 17;508(7496):411-5 - PubMed
  58. Philos Trans R Soc Lond B Biol Sci. 2008 Jun 27;363(1500):2099-109 - PubMed
  59. Nature. 2009 Nov 5;462(7269):58-64 - PubMed
  60. Cell. 2012 Nov 9;151(4):724-37 - PubMed
  61. Nucleic Acids Res. 2011 Aug;39(15):6475-88 - PubMed
  62. Cell. 2007 May 18;129(4):823-37 - PubMed
  63. PLoS One. 2013;8(3):e59922 - PubMed
  64. Blood. 2009 Sep 24;114(13):2733-43 - PubMed
  65. Epigenomics. 2012 Jun;4(3):317-24 - PubMed
  66. J Neurosci. 2013 Nov 6;33(45):17577-86 - PubMed
  67. Proc Natl Acad Sci U S A. 2010 Dec 14;107(50):21931-6 - PubMed
  68. Anal Chem. 2010 Mar 15;82(6):2480-7 - PubMed
  69. Am J Hum Genet. 2008 Mar;82(3):696-711 - PubMed
  70. Brain Res. 2002 Jun 28;942(1-2):120-3 - PubMed
  71. J Med Genet. 2001 Dec;38(12 ):834-45 - PubMed
  72. Nature. 2011 Aug 03;478(7370):524-8 - PubMed
  73. Nature. 2012 Sep 6;489(7414):57-74 - PubMed
  74. Nature. 2012 Feb 29;483(7388):222-6 - PubMed
  75. Curr Opin Neurobiol. 2010 Aug;20(4):432-40 - PubMed
  76. Brain Res Mol Brain Res. 2005 Aug 18;138(2):164-77 - PubMed
  77. Nat Neurosci. 2014 Sep;17(9):1138-40 - PubMed
  78. Cell. 2013 May 23;153(5):1149-63 - PubMed
  79. Curr Opin Neurobiol. 2013 Dec;23(6):903-13 - PubMed
  80. Nature. 2010 Dec 23;468(7327):1067-73 - PubMed
  81. Annu Rev Cell Dev Biol. 2014;30:561-80 - PubMed
  82. Nat Genet. 2012 Mar 18;44(4):376-8 - PubMed
  83. Science. 2011 Sep 2;333(6047):1300-3 - PubMed
  84. Nat Neurosci. 2014 Jan;17 (1):89-96 - PubMed
  85. Nat Rev Mol Cell Biol. 2012 Jan 23;13(2):115-26 - PubMed
  86. Mol Biosyst. 2010 Aug;6(8):1376-80 - PubMed
  87. Nat Neurosci. 2013 Apr;16(4):434-40 - PubMed
  88. Neurobiol Aging. 2011 Jul;32(7):1196-7 - PubMed
  89. Mol Cancer. 2011 Sep 22;10:117 - PubMed
  90. J Neurosci. 2014 Feb 19;34(8):2768-73 - PubMed
  91. Nat Genet. 1999 Oct;23(2):185-8 - PubMed
  92. Nat Neurosci. 2014 Sep;17(9):1164-70 - PubMed
  93. Neurobiol Learn Mem. 2013 Oct;105:133-50 - PubMed
  94. Nat Rev Genet. 2009 Jan;10(1):32-42 - PubMed
  95. J Hum Genet. 2013 Jul;58(7):439-45 - PubMed
  96. Nature. 2007 May 10;447(7141):178-82 - PubMed
  97. Neuropharmacology. 2014 May;80:3-17 - PubMed
  98. Nature. 2010 Jun 10;465(7299):728-35 - PubMed
  99. J Med Chem. 2010 Aug 12;53(15):5629-38 - PubMed
  100. Nucleic Acids Res. 2012 Jan;40(Database issue):D1245-9 - PubMed
  101. J Natl Cancer Inst. 2006 Oct 18;98(20):1443-4 - PubMed
  102. Semin Cell Dev Biol. 2013 Apr;24(4):357-69 - PubMed
  103. Neurobiol Learn Mem. 2011 Jul;96(1):41-52 - PubMed
  104. Nat Neurosci. 2014 Feb;17(2):215-22 - PubMed
  105. Nat Neurosci. 2014 Sep;17(9):1156-63 - PubMed
  106. Neurobiol Learn Mem. 2011 Jul;96(1):53-60 - PubMed
  107. Nat Genet. 2013 Jun;45(6):580-5 - PubMed
  108. Clin Ther. 2014 Jun 1;36(6):830-46 - PubMed
  109. Neuron. 2007 Nov 8;56(3):517-29 - PubMed
  110. Genome Res. 2013 Mar;23(3):555-67 - PubMed
  111. Nat Rev Neurosci. 2014 Aug;15(8):497-506 - PubMed
  112. Nat Neurosci. 2004 Aug;7(8):847-54 - PubMed
  113. Hum Mol Genet. 2004 Jun 15;13(12):1275-86 - PubMed
  114. Nat Methods. 2013 May;10(5):375-6 - PubMed
  115. Am J Hum Genet. 2005 Feb;76(2):227-36 - PubMed
  116. Nat Rev Drug Discov. 2012 Apr 13;11(5):384-400 - PubMed
  117. Nat Neurosci. 2010 Jun;13(6):664-6 - PubMed
  118. J Mol Biol. 2014 Oct 9;426(20):3389-412 - PubMed
  119. Nat Rev Genet. 2007 Jan;8(1):35-46 - PubMed
  120. Nat Methods. 2011 Nov 29;8(12):989-90 - PubMed
  121. Nat Neurosci. 2010 Sep;13(9):1137-43 - PubMed
  122. Stem Cells Dev. 2014 May 1;23(9):923-30 - PubMed
  123. Nature. 2011 Oct 26;478(7370):519-23 - PubMed
  124. Nat Genet. 2013 Feb;45(2):124-30 - PubMed
  125. Science. 2009 May 15;324(5929):929-30 - PubMed
  126. Front Neuroendocrinol. 2008 Jun;29(3):386-97 - PubMed
  127. J Neurosci Methods. 2008 Sep 15;174(1):123-5 - PubMed
  128. Nature. 2011 Feb 10;470(7333):279-83 - PubMed
  129. J Neurosci. 2005 Mar 2;25(9):2176-80 - PubMed
  130. Nature. 2011 May 25;474(7351):380-4 - PubMed
  131. Trends Pharmacol Sci. 2013 Jul;34(7):385-92 - PubMed
  132. Cell. 2012 Dec 21;151(7):1417-30 - PubMed
  133. Neuron. 2011 Jun 9;70(5):813-29 - PubMed
  134. Epigenomics. 2010 Apr;2(2):183-6 - PubMed
  135. Nature. 2009 Nov 19;462(7271):315-22 - PubMed
  136. Epigenomics. 2009 Oct;1(1):119-30 - PubMed
  137. Neuron. 2009 May 14;62(3):335-48 - PubMed
  138. Nat Genet. 2014 Feb;46(2):136-43 - PubMed
  139. Nat Biotechnol. 2013 Aug;31(8):748-52 - PubMed
  140. Neuropharmacology. 2014 May;80:70-82 - PubMed
  141. Exp Neurol. 2015 Jun;268:3-9 - PubMed
  142. Genes Dev. 2009 Apr 1;23(7):781-3 - PubMed
  143. Nat Neurosci. 2009 Mar;12(3):342-8 - PubMed
  144. Nature. 2011 Mar 3;471(7336):68-73 - PubMed
  145. Endocrinology. 2014 Aug;155(8):2770-80 - PubMed
  146. Leg Med (Tokyo). 2006 Mar;8(2):132-6 - PubMed
  147. Nat Neurosci. 2014 May;17(5):667-9 - PubMed
  148. Behav Brain Res. 2011 Mar 17;218(1):200-5 - PubMed
  149. Physiol Genomics. 2004 Jan 15;16(2):222-8 - PubMed
  150. J Neuropathol Exp Neurol. 2010 Jan;69(1):70-81 - PubMed
  151. Science. 2009 Oct 9;326(5950):289-93 - PubMed
  152. Nat Genet. 2014 Apr;46(4):385-8 - PubMed
  153. Neuropsychopharmacology. 2013 Jan;38(1):3-22 - PubMed
  154. Science. 2009 May 15;324(5929):930-5 - PubMed
  155. Nat Genet. 2012 Mar 18;44(4):379-80 - PubMed
  156. Curr Opin Neurobiol. 2013 Aug;23(4):521-8 - PubMed
  157. J Cell Sci. 2010 Nov 15;123(Pt 22):3837-48 - PubMed
  158. Science. 2012 Sep 7;337(6099):1190-5 - PubMed
  159. Proc Natl Acad Sci U S A. 1982 Jul;79(13):4118-22 - PubMed
  160. Nature. 2011 May 5;473(7345):43-9 - PubMed
  161. Proc Natl Acad Sci U S A. 2003 Jul 22;100(15):8758-63 - PubMed
  162. Neuron. 2013 Oct 30;80(3):624-32 - PubMed
  163. Curr Opin Genet Dev. 2006 Jun;16(3):276-81 - PubMed
  164. Am J Med Genet. 1997 Jan 20;68(2):195-206 - PubMed
  165. Neurobiol Learn Mem. 2008 May;89(4):599-603 - PubMed
  166. Behav Brain Res. 2014 May 15;265:142-7 - PubMed
  167. Genome Biol. 2012 Jun 15;13(6):R43 - PubMed
  168. Prog Brain Res. 2012;196:49-61 - PubMed
  169. Am J Physiol Lung Cell Mol Physiol. 2013 Oct 1;305(7):L501-7 - PubMed
  170. Mol Psychiatry. 2015 Feb;20(2):232-9 - PubMed
  171. PLoS One. 2011 Jan 21;6(1):e16266 - PubMed
  172. Clin Cancer Res. 2009 Dec 1;15(23):7111-3 - PubMed
  173. Nature. 2009 Jul 30;460(7255):642-6 - PubMed
  174. Nat Rev Neurosci. 2011 Oct 12;12(11):623-37 - PubMed
  175. Proc Natl Acad Sci U S A. 2013 Jun 4;110(23):9607-12 - PubMed
  176. Trends Neurosci. 2010 Aug;33(8):345-54 - PubMed
  177. Biol Psychiatry. 2014 Jun 15;75(12):961-9 - PubMed

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