Display options
Share it on

Nephrol Dial Transplant. 2017 Feb 01;32(2):325-332. doi: 10.1093/ndt/gfw001. Epub 2016 Feb 04.

Genetic risk variants for membranous nephropathy: extension of and association with other chronic kidney disease aetiologies.

Nephrology, dialysis, transplantation : official publication of the European Dialysis and Transplant Association - European Renal Association

Peggy Sekula, Yong Li, Horia C Stanescu, Matthias Wuttke, Arif B Ekici, Detlef Bockenhauer, Gerd Walz, Stephen H Powis, Jan T Kielstein, Paul Brenchley, Kai-Uwe Eckardt, Florian Kronenberg, Robert Kleta, Anna Köttgen

Affiliations

  1. Department of Internal Medicine IV, Medical Center-University of Freiburg, Freiburg, Germany.
  2. Center for Medical Biometry and Medical Informatics, Medical Center-University of Freiburg, Freiburg, Germany.
  3. Centre for Nephrology, University College London, London, UK.
  4. Institute of Human Genetics, Friedrich-Alexander University, Erlangen-Nürnberg, Germany.
  5. Department of Nephrology and Hypertension, Hannover Medical School, Hannover, Germany.
  6. Institute of Cardiovascular Sciences, University of Manchester, Manchester, UK.
  7. Department of Nephrology and Hypertension, Friedrich-Alexander University, Erlangen-Nürnberg, Germany.
  8. Division of Genetic Epidemiology, Department of Medical Genetics, Molecular and Clinical Pharmacology, Medical University of Innsbruck, Innsbruck, Austria.

PMID: 27333618 PMCID: PMC5837679 DOI: 10.1093/ndt/gfw001

Abstract

BACKGROUND: Membranous nephropathy (MN) is a common cause of nephrotic syndrome in adults. Previous genome-wide association studies (GWAS) of 300 000 genotyped variants identified MN-associated loci at HLA-DQA1 and PLA2R1.

METHODS: We used a combined approach of genotype imputation, GWAS, human leucocyte antigen (HLA) imputation and extension to other aetiologies of chronic kidney disease (CKD) to investigate genetic MN risk variants more comprehensively. GWAS using 9 million high-quality imputed genotypes and classical HLA alleles were conducted for 323 MN European-ancestry cases and 345 controls. Additionally, 4960 patients with different CKD aetiologies in the German Chronic Kidney Disease (GCKD) study were genotyped for risk variants at HLA-DQA1 and PLA2R1.

RESULTS: In GWAS, lead variants in known loci [rs9272729, HLA-DQA1, odds ratio (OR) = 7.3 per risk allele, P = 5.9 × 10

CONCLUSIONS: PLA2R1 and HLA-DQA1 are the predominant risk loci for MN detected by GWAS. While HLA-DQA1 risk variants show an association with other CKD aetiologies, PLA2R1 variants are specific to MN.

© The Author 2016. Published by Oxford University Press on behalf of ERA-EDTA. All rights reserved.

Keywords: chronic kidney disease; genome-wide association study; membranous nephropathy

References

  1. Hum Immunol. 1990 Nov;29(3):157-65 - PubMed
  2. Tissue Antigens. 1989 Nov;34(5):261-9 - PubMed
  3. Kidney Int. 2013 May;83(5):940-8 - PubMed
  4. Nat Genet. 2006 Aug;38(8):904-9 - PubMed
  5. J Am Soc Nephrol. 2011 Nov;22(11):2129-37 - PubMed
  6. Nat Methods. 2011 Dec 04;9(2):179-81 - PubMed
  7. J Am Soc Nephrol. 2013 Mar;24(4):677-83 - PubMed
  8. Br Med J (Clin Res Ed). 1984 Dec 1;289(6457):1500 - PubMed
  9. N Engl J Med. 2011 May 26;364(21):2072-3; author reply 2073-4 - PubMed
  10. Clin J Am Soc Nephrol. 2014 Feb;9(2):335-43 - PubMed
  11. N Engl J Med. 2009 Jul 2;361(1):11-21 - PubMed
  12. Nat Genet. 2007 Jul;39(7):906-13 - PubMed
  13. PLoS Genet. 2007 Nov;3(11):e192 - PubMed
  14. N Engl J Med. 2011 Feb 17;364(7):616-26 - PubMed
  15. Nat Genet. 2015 Oct;47(10 ):1121-1130 - PubMed
  16. Am J Hum Genet. 2008 Jan;82(1):48-56 - PubMed
  17. Semin Immunopathol. 2014 Jul;36(4):381-97 - PubMed
  18. Nat Rev Genet. 2010 Jul;11(7):499-511 - PubMed
  19. J Am Soc Nephrol. 2015 Jul;26(7):1701-10 - PubMed
  20. Am J Nephrol. 2011;34(5):452-9 - PubMed
  21. Diabetes. 2008 Apr;57(4):1084-92 - PubMed
  22. J Clin Invest. 2014 Jun;124(6):2307-14 - PubMed
  23. Nat Genet. 2011 Mar 13;43(4):321-7 - PubMed
  24. Am J Hum Genet. 2007 Sep;81(3):559-75 - PubMed
  25. J Clin Endocrinol Metab. 1993 Jun;76(6):1569-74 - PubMed
  26. Nephrol Dial Transplant. 2015 Mar;30(3):441-51 - PubMed
  27. PLoS Genet. 2009 Jun;5(6):e1000529 - PubMed
  28. Nephrol Dial Transplant. 2012 Apr;27(4):1454-60 - PubMed
  29. PLoS Genet. 2015 Jul 01;11(7):e1005230 - PubMed
  30. J Am Soc Nephrol. 2013 Jul;24(8):1323-9 - PubMed
  31. N Engl J Med. 2014 Dec 11;371(24):2277-2287 - PubMed
  32. N Engl J Med. 2011 May 26;364(21):2072; author reply 2073-4 - PubMed

Publication Types

Grant support