Display options
Share it on

IUCrJ. 2017 May 24;4:455-465. doi: 10.1107/S2052252517006212. eCollection 2017 Jul 01.

Healing X-ray scattering images.

IUCrJ

Jiliang Liu, Julien Lhermitte, Ye Tian, Zheng Zhang, Dantong Yu, Kevin G Yager

Affiliations

  1. Center for Functional Nanomaterials, Brookhaven National Laboratory, Upton, New York 11973, USA.
  2. Computational Science Initiative, Brookhaven National Laboratory, Upton, New York 11973, USA.
  3. New Jersey Institute of Technology, Newark, New Jersey 07102, USA.

PMID: 28875032 PMCID: PMC5571808 DOI: 10.1107/S2052252517006212

Abstract

X-ray scattering images contain numerous gaps and defects arising from detector limitations and experimental configuration. We present a method to heal X-ray scattering images, filling gaps in the data and removing defects in a physically meaningful manner. Unlike generic inpainting methods, this method is closely tuned to the expected structure of reciprocal-space data. In particular, we exploit statistical tests and symmetry analysis to identify the structure of an image; we then copy, average and interpolate measured data into gaps in a way that respects the identified structure and symmetry. Importantly, the underlying analysis methods provide useful characterization of structures present in the image, including the identification of diffuse

Keywords: SAXS; X-ray scattering; data completion; image healing; inpainting

References

  1. Nat Mater. 2016 Jun;15(6):654-61 - PubMed
  2. IUCrJ. 2015 Feb 03;2(Pt 2):246-55 - PubMed
  3. Anal Bioanal Chem. 2003 May;376(1):3-10 - PubMed
  4. IUCrJ. 2015 Feb 03;2(Pt 2):230-45 - PubMed
  5. IUCrJ. 2016 Sep 26;3(Pt 6):420-429 - PubMed
  6. J Phys Condens Matter. 2016 Oct 12;28(40):403002 - PubMed
  7. IEEE Trans Image Process. 2003;12(8):882-9 - PubMed
  8. Sci Rep. 2016 Sep 15;6:33079 - PubMed
  9. PeerJ. 2014 Jun 19;2:e453 - PubMed
  10. Opt Express. 2012 Jun 4;20(12):12827-49 - PubMed
  11. Opt Express. 2012 Jun 4;20(12):12799-826 - PubMed
  12. J Synchrotron Radiat. 2013 Mar;20(Pt 2):211-8 - PubMed
  13. Protein Sci. 2010 Apr;19(4):642-57 - PubMed
  14. Biotechnol Biofuels. 2016 Jun 17;9:126 - PubMed
  15. Annu Rev Phys Chem. 2013;64:37-54 - PubMed
  16. J Appl Crystallogr. 2015 Jan 30;48(Pt 1):301-305 - PubMed
  17. Langmuir. 2010 Jun 1;26(11):9146-51 - PubMed
  18. Proc Natl Acad Sci U S A. 2009 Jul 14;106(28):11511-4 - PubMed
  19. IUCrJ. 2017 Jan 01;4(Pt 1):87-99 - PubMed
  20. IUCrJ. 2014 Oct 21;1(Pt 6):523-9 - PubMed
  21. Chem Rev. 2001 Jun;101(6):1727-61 - PubMed
  22. IEEE Trans Image Process. 2004 Sep;13(9):1200-12 - PubMed
  23. Opt Express. 2011 Aug 15;19(17):16542-9 - PubMed
  24. Chem Rev. 2016 Sep 28;116(18):11128-80 - PubMed
  25. Adv Mater. 2014 Dec 10;26(46):7902-10 - PubMed
  26. IUCrJ. 2015 Jan 01;2(Pt 1):106-25 - PubMed

Publication Types