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Xu, D., Zhang, J., Roy, A., & Zhang, Y. (2011). Automated protein structure modeling in CASP9 by I‐TASSER pipeline combined with QUARK‐based ab initio folding and FG‐MD‐based structure refinement. Proteins: Structure, Function, and Bioinformatics, 79(S10), 147-160.
Xu, Dong, et al. "Automated protein structure modeling in CASP9 by I‐TASSER pipeline combined with QUARK‐based ab initio folding and FG‐MD‐based structure refinement." Proteins: Structure, Function, and Bioinformatics 79.S10 (2011): 147-160.
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D Xu, J Zhang, A Roy, Y Zhang - Proteins: Structure, Function …, 2011 - Wiley Online Library

Automated protein structure modeling in CASP9 by I‐TASSER pipeline combined with QUARK‐based ab initio folding and FG‐MD‐based structure refinement.

pipeline programs

Xu, Zhang, Roy, Zhang

GSID: hL6I-10K2qQJ

Excerpt

… The QUARK server (for Easy targets) used all the eight LOMETS threading programs plus two in-house threading programs PPA-II and … top 20 templates identified by each threading programs and then re-rank the templates of all LOMETS programs based on their TM-score to …

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