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Showing 13 to 24 of 831 entries
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Corrigendum: High-throughput discovery of novel developmental phenotypes.

Nature

Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie Helmut Fuchs SM, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Nutter SNLMJ, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, Wurst W, MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SDM, Adams DJ, Lloyd KCK, McKerlie C, Beaudet AL, Murray MBSA.
PMID: 29144450
Nature. 2017 Nov 16;551(7680):398. doi: 10.1038/nature24643. Epub 2017 Nov 08.

This corrects the article DOI: 10.1038/nature19356.

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Dickinson ME, Flenniken AM, Ji X, et al. Corrigendum: High-throughput discovery of novel developmental phenotypes. Nature. 2017;551(7680):398doi: 10.1038/nature24643.
Dickinson, M. E., Flenniken, A. M., Ji, X., Teboul, L., Wong, M. D., White, J. K., Meehan, T. F., Weninger, W. J., Westerberg, H., Adissu, H., Baker, C. N., Bower, L., Brown, J. M., Caddle, L. B., Chiani, F., Clary, D., Cleak, J., Daly, M. J., Denegre, J. M., Doe, B., Dolan, M. E., Edie Helmut Fuchs, S. M., Gailus-Durner, V., Galli, A., Gambadoro, A., Gallegos, J., Guo, S., Horner, N. R., Hsu, C. W., Johnson, S. J., Kalaga, S., Keith, L. C., Lanoue, L., Lawson, T. N., Lek, M., Mark, M., Marschall, S., Mason, J., McElwee, M. L., Nutter, S. N. L. M. J., Peterson, K. A., Ramirez-Solis, R., Rowland, D. J., Ryder, E., Samocha, K. E., Seavitt, J. R., Selloum, M., Szoke-Kovacs, Z., Tamura, M., Trainor, A. G., Tudose, I., Wakana, S., Warren, J., Wendling, O., West, D. B., Wong, L., Yoshiki, A., Wurst, W., MacArthur, D. G., Tocchini-Valentini, G. P., Gao, X., Flicek, P., Bradley, A., Skarnes, W. C., Justice, M. J., Parkinson, H. E., Moore, M., Wells, S., Braun, R. E., Svenson, K. L., de Angelis, M. H., Herault, Y., Mohun, T., Mallon, A. M., Henkelman, R. M., Brown, S. D. M., Adams, D. J., Lloyd, K. C. K., McKerlie, C., Beaudet, A. L., & Murray, M. B. S. A. (2017). Corrigendum: High-throughput discovery of novel developmental phenotypes. Nature, 551(7680), 398. https://doi.org/10.1038/nature24643
Dickinson, Mary E, et al. "Corrigendum: High-throughput discovery of novel developmental phenotypes." Nature vol. 551,7680 (2017): 398. doi: https://doi.org/10.1038/nature24643
Dickinson ME, Flenniken AM, Ji X, Teboul L, Wong MD, White JK, Meehan TF, Weninger WJ, Westerberg H, Adissu H, Baker CN, Bower L, Brown JM, Caddle LB, Chiani F, Clary D, Cleak J, Daly MJ, Denegre JM, Doe B, Dolan ME, Edie Helmut Fuchs SM, Gailus-Durner V, Galli A, Gambadoro A, Gallegos J, Guo S, Horner NR, Hsu CW, Johnson SJ, Kalaga S, Keith LC, Lanoue L, Lawson TN, Lek M, Mark M, Marschall S, Mason J, McElwee ML, Nutter SNLMJ, Peterson KA, Ramirez-Solis R, Rowland DJ, Ryder E, Samocha KE, Seavitt JR, Selloum M, Szoke-Kovacs Z, Tamura M, Trainor AG, Tudose I, Wakana S, Warren J, Wendling O, West DB, Wong L, Yoshiki A, Wurst W, MacArthur DG, Tocchini-Valentini GP, Gao X, Flicek P, Bradley A, Skarnes WC, Justice MJ, Parkinson HE, Moore M, Wells S, Braun RE, Svenson KL, de Angelis MH, Herault Y, Mohun T, Mallon AM, Henkelman RM, Brown SDM, Adams DJ, Lloyd KCK, McKerlie C, Beaudet AL, Murray MBSA. Corrigendum: High-throughput discovery of novel developmental phenotypes. Nature. 2017 Nov 16;551(7680):398. doi: 10.1038/nature24643. Epub 2017 Nov 08. PMID: 29144450; PMCID: PMC5849394.
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NetMatchStar: an enhanced Cytoscape network querying app.

F1000Research

Rinnone F, Micale G, Bonnici V, Bader GD, Shasha D, Ferro A, Pulvirenti A, Giugno R.
PMID: 26594341
F1000Res. 2015 Aug 05;4:479. doi: 10.12688/f1000research.6656.1. eCollection 2015.

We present NetMatchStar, a Cytoscape app to find all the occurrences of a query graph in a network and check for its significance as a motif with respect to seven different random models. The query can be uploaded or...

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Rinnone F, Micale G, Bonnici V, et al. NetMatchStar: an enhanced Cytoscape network querying app. F1000Res. 2015;4:479doi: 10.12688/f1000research.6656.1.
Rinnone, F., Micale, G., Bonnici, V., Bader, G. D., Shasha, D., Ferro, A., Pulvirenti, A., & Giugno, R. (2015). NetMatchStar: an enhanced Cytoscape network querying app. F1000Research, 4479. https://doi.org/10.12688/f1000research.6656.1
Rinnone, Fabio, et al. "NetMatchStar: an enhanced Cytoscape network querying app." F1000Research vol. 4 (2015): 479. doi: https://doi.org/10.12688/f1000research.6656.1
Rinnone F, Micale G, Bonnici V, Bader GD, Shasha D, Ferro A, Pulvirenti A, Giugno R. NetMatchStar: an enhanced Cytoscape network querying app. F1000Res. 2015 Aug 05;4:479. doi: 10.12688/f1000research.6656.1. eCollection 2015. PMID: 26594341; PMCID: PMC4642848.
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Interpreting predictive maps of disease: highlighting the pitfalls of distribution models in epidemiology.

Geospatial health

Wardrop NA, Geary M, Osborne PE, Atkinson PM.
PMID: 25545941
Geospat Health. 2014 Nov;9(1):237-46. doi: 10.4081/gh.2014.397.

The application of spatial modelling to epidemiology has increased significantly over the past decade, delivering enhanced understanding of the environmental and climatic factors affecting disease distributions and providing spatially continuous representations of disease risk (predictive maps). These outputs provide...

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Wardrop NA, Geary M, Osborne PE, et al. Interpreting predictive maps of disease: highlighting the pitfalls of distribution models in epidemiology. Geospat Health. 2014;9(1):237-46doi: 10.4081/gh.2014.397.
Wardrop, N. A., Geary, M., Osborne, P. E., & Atkinson, P. M. (2014). Interpreting predictive maps of disease: highlighting the pitfalls of distribution models in epidemiology. Geospatial health, 9(1), 237-46. https://doi.org/10.4081/gh.2014.397
Wardrop, Nicola A, et al. "Interpreting predictive maps of disease: highlighting the pitfalls of distribution models in epidemiology." Geospatial health vol. 9,1 (2014): 237-46. doi: https://doi.org/10.4081/gh.2014.397
Wardrop NA, Geary M, Osborne PE, Atkinson PM. Interpreting predictive maps of disease: highlighting the pitfalls of distribution models in epidemiology. Geospat Health. 2014 Nov;9(1):237-46. doi: 10.4081/gh.2014.397. PMID: 25545941.
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Real-world analysis of the Celgene Global Drug Safety database: early discontinuation of lenalidomide in patients with myelodysplastic syndromes due to non-serious rash.

Therapeutics and clinical risk management

Weiss L, Gary D, Swern AS, Freeman J, Sugrue MM.
PMID: 26379438
Ther Clin Risk Manag. 2015 Sep 04;11:1355-60. doi: 10.2147/TCRM.S86449. eCollection 2015.

BACKGROUND: Lenalidomide is approved for treating transfusion-dependent anemia due to lower-risk del(5q) myelodysplastic syndromes (MDS). In clinical trials, rash was common, although severe rash was infrequent. To examine rash in patients with MDS treated with lenalidomide in the real...

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Weiss L, Gary D, Swern AS, et al. Real-world analysis of the Celgene Global Drug Safety database: early discontinuation of lenalidomide in patients with myelodysplastic syndromes due to non-serious rash. Ther Clin Risk Manag. 2015;11:1355-60doi: 10.2147/TCRM.S86449.
Weiss, L., Gary, D., Swern, A. S., Freeman, J., & Sugrue, M. M. (2015). Real-world analysis of the Celgene Global Drug Safety database: early discontinuation of lenalidomide in patients with myelodysplastic syndromes due to non-serious rash. Therapeutics and clinical risk management, 111355-60. https://doi.org/10.2147/TCRM.S86449
Weiss, Lilia, et al. "Real-world analysis of the Celgene Global Drug Safety database: early discontinuation of lenalidomide in patients with myelodysplastic syndromes due to non-serious rash." Therapeutics and clinical risk management vol. 11 (2015): 1355-60. doi: https://doi.org/10.2147/TCRM.S86449
Weiss L, Gary D, Swern AS, Freeman J, Sugrue MM. Real-world analysis of the Celgene Global Drug Safety database: early discontinuation of lenalidomide in patients with myelodysplastic syndromes due to non-serious rash. Ther Clin Risk Manag. 2015 Sep 04;11:1355-60. doi: 10.2147/TCRM.S86449. eCollection 2015. PMID: 26379438; PMCID: PMC4567225.
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A silver bullet in a golden age of functional genomics: the impact of .

Fungal biology and biotechnology

Idnurm A, Bailey AM, Cairns TC, Elliott CE, Foster GD, Ianiri G, Jeon J.
PMID: 28955474
Fungal Biol Biotechnol. 2017 Sep 26;4:6. doi: 10.1186/s40694-017-0035-0. eCollection 2017.

The implementation of

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Idnurm A, Bailey AM, Cairns TC, et al. A silver bullet in a golden age of functional genomics: the impact of . Fungal Biol Biotechnol. 2017;4:6doi: 10.1186/s40694-017-0035-0.
Idnurm, A., Bailey, A. M., Cairns, T. C., Elliott, C. E., Foster, G. D., Ianiri, G., & Jeon, J. (2017). A silver bullet in a golden age of functional genomics: the impact of . Fungal biology and biotechnology, 46. https://doi.org/10.1186/s40694-017-0035-0
Idnurm, Alexander, et al. "A silver bullet in a golden age of functional genomics: the impact of ." Fungal biology and biotechnology vol. 4 (2017): 6. doi: https://doi.org/10.1186/s40694-017-0035-0
Idnurm A, Bailey AM, Cairns TC, Elliott CE, Foster GD, Ianiri G, Jeon J. A silver bullet in a golden age of functional genomics: the impact of . Fungal Biol Biotechnol. 2017 Sep 26;4:6. doi: 10.1186/s40694-017-0035-0. eCollection 2017. PMID: 28955474; PMCID: PMC5615635.
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Errata: Spatially correlated microthermography maps threshold temperature in laser-induced damage.

Journal of biomedical optics

Denton ML, Noojin GD, Foltz MS, Clark CD, Estlack LE, Rockwell BA, Thomas RJ.
PMID: 26222964
J Biomed Opt. 2015 Jul;20(7):079801. doi: 10.1117/1.JBO.20.7.079801.

No abstract available.

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Denton ML, Noojin GD, Foltz MS, et al. Errata: Spatially correlated microthermography maps threshold temperature in laser-induced damage. J Biomed Opt. 2015;20(7):079801doi: 10.1117/1.JBO.20.7.079801.
Denton, M. L., Noojin, G. D., Foltz, M. S., Clark, C. D., Estlack, L. E., Rockwell, B. A., & Thomas, R. J. (2015). Errata: Spatially correlated microthermography maps threshold temperature in laser-induced damage. Journal of biomedical optics, 20(7), 079801. https://doi.org/10.1117/1.JBO.20.7.079801
Denton, Michael L, et al. "Errata: Spatially correlated microthermography maps threshold temperature in laser-induced damage." Journal of biomedical optics vol. 20,7 (2015): 079801. doi: https://doi.org/10.1117/1.JBO.20.7.079801
Denton ML, Noojin GD, Foltz MS, Clark CD, Estlack LE, Rockwell BA, Thomas RJ. Errata: Spatially correlated microthermography maps threshold temperature in laser-induced damage. J Biomed Opt. 2015 Jul;20(7):079801. doi: 10.1117/1.JBO.20.7.079801. PMID: 26222964.
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Parathyroid hormone as a marker for metabolic bone disease of prematurity.

Journal of perinatology : official journal of the California Perinatal Association

Moreira A, Swischuk L, Malloy M, Mudd D, Blanco C, Geary C.
PMID: 26219702
J Perinatol. 2015 Aug;35(8):667. doi: 10.1038/jp.2015.64.

No abstract available.

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Moreira A, Swischuk L, Malloy M, et al. Parathyroid hormone as a marker for metabolic bone disease of prematurity. J Perinatol. 2015;35(8):667doi: 10.1038/jp.2015.64.
Moreira, A., Swischuk, L., Malloy, M., Mudd, D., Blanco, C., & Geary, C. (2015). Parathyroid hormone as a marker for metabolic bone disease of prematurity. Journal of perinatology : official journal of the California Perinatal Association, 35(8), 667. https://doi.org/10.1038/jp.2015.64
Moreira, A, et al. "Parathyroid hormone as a marker for metabolic bone disease of prematurity." Journal of perinatology : official journal of the California Perinatal Association vol. 35,8 (2015): 667. doi: https://doi.org/10.1038/jp.2015.64
Moreira A, Swischuk L, Malloy M, Mudd D, Blanco C, Geary C. Parathyroid hormone as a marker for metabolic bone disease of prematurity. J Perinatol. 2015 Aug;35(8):667. doi: 10.1038/jp.2015.64. PMID: 26219702.
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Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes.

F1000Research

Ammar R, Paton TA, Torti D, Shlien A, Bader GD.
PMID: 25901276
F1000Res. 2015 Jan 21;4:17. doi: 10.12688/f1000research.6037.1. eCollection 2015.

Haplotypes are often critical for the interpretation of genetic laboratory observations into medically actionable findings. Current massively parallel DNA sequencing technologies produce short sequence reads that are often unable to resolve haplotype information. Phasing short read data typically requires...

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Ammar R, Paton TA, Torti D, et al. Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes. F1000Res. 2015;4:17doi: 10.12688/f1000research.6037.1.
Ammar, R., Paton, T. A., Torti, D., Shlien, A., & Bader, G. D. (2015). Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes. F1000Research, 417. https://doi.org/10.12688/f1000research.6037.1
Ammar, Ron, et al. "Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes." F1000Research vol. 4 (2015): 17. doi: https://doi.org/10.12688/f1000research.6037.1
Ammar R, Paton TA, Torti D, Shlien A, Bader GD. Long read nanopore sequencing for detection of HLA and CYP2D6 variants and haplotypes. F1000Res. 2015 Jan 21;4:17. doi: 10.12688/f1000research.6037.1. eCollection 2015. PMID: 25901276; PMCID: PMC4392832.
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Photoinduced alkyl group exchange of ethylzinc alkoxides: X-ray crystal structure of an iodomethylzinc methoxide.

Chemical communications (Cambridge, England)

Charette A, Beauchemin A, Francoeur S, Bélanger-Gariépy F, Enright GD.
PMID: 12120544
Chem Commun (Camb). 2002 Mar 07;(5):466-7. doi: 10.1039/b110736d.

Irradiation of a solution of ethyl zinc alkoxides and CH2I2 leads to clean formation of iodomethylzinc alkoxides; these intermediates are important species generated in stereoselective cyclopropanation processes; no alkyl group exchange is observed in the absence of irradiation; the...

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Charette A, Beauchemin A, Francoeur S, et al. Photoinduced alkyl group exchange of ethylzinc alkoxides: X-ray crystal structure of an iodomethylzinc methoxide. Chem Commun (Camb). 2002;(5):466-7doi: 10.1039/b110736d.
Charette, A., Beauchemin, A., Francoeur, S., Bélanger-Gariépy, F., & Enright, G. D. (2002). Photoinduced alkyl group exchange of ethylzinc alkoxides: X-ray crystal structure of an iodomethylzinc methoxide. Chemical communications (Cambridge, England), (5), 466-7. https://doi.org/10.1039/b110736d
Charette, André, et al. "Photoinduced alkyl group exchange of ethylzinc alkoxides: X-ray crystal structure of an iodomethylzinc methoxide." Chemical communications (Cambridge, England) vol. ,5 (2002): 466-7. doi: https://doi.org/10.1039/b110736d
Charette A, Beauchemin A, Francoeur S, Bélanger-Gariépy F, Enright GD. Photoinduced alkyl group exchange of ethylzinc alkoxides: X-ray crystal structure of an iodomethylzinc methoxide. Chem Commun (Camb). 2002 Mar 07;(5):466-7. doi: 10.1039/b110736d. PMID: 12120544.
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Field evaluation of seed production, shattering, and dormancy in hybrid populations of transgenic rice (Oryza sativa) and the weed, red rice (Oryza sativa).

Plant science : an international journal of experimental plant biology

Oard J, Cohn MA, Linscombe S, Gealy D, Gravois1 K.
PMID: 10940465
Plant Sci. 2000 Aug 08;157(1):13-22. doi: 10.1016/s0168-9452(00)00245-4.

The genetic and agronomic consequences of transferring glufosinate (Liberty) herbicide resistance from transgenic rice (Oryza sativa L.) lines to the noxious weed red rice (Oryza sativa L.) were evaluated under field conditions. Replicated field trials in Louisiana (LA) and...

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Oard J, Cohn MA, Linscombe S, et al. Field evaluation of seed production, shattering, and dormancy in hybrid populations of transgenic rice (Oryza sativa) and the weed, red rice (Oryza sativa). Plant Sci. 2000;157(1):13-22doi: 10.1016/s0168-9452(00)00245-4.
Oard, J., Cohn, M. A., Linscombe, S., Gealy, D., & Gravois1, K. (2000). Field evaluation of seed production, shattering, and dormancy in hybrid populations of transgenic rice (Oryza sativa) and the weed, red rice (Oryza sativa). Plant science : an international journal of experimental plant biology, 157(1), 13-22. https://doi.org/10.1016/s0168-9452(00)00245-4
Oard, et al. "Field evaluation of seed production, shattering, and dormancy in hybrid populations of transgenic rice (Oryza sativa) and the weed, red rice (Oryza sativa)." Plant science : an international journal of experimental plant biology vol. 157,1 (2000): 13-22. doi: https://doi.org/10.1016/s0168-9452(00)00245-4
Oard J, Cohn MA, Linscombe S, Gealy D, Gravois1 K. Field evaluation of seed production, shattering, and dormancy in hybrid populations of transgenic rice (Oryza sativa) and the weed, red rice (Oryza sativa). Plant Sci. 2000 Aug 08;157(1):13-22. doi: 10.1016/s0168-9452(00)00245-4. PMID: 10940465.
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Shoulder dystocia: risk factors and maternal and perinatal outcome.

Journal of obstetrics and gynaecology : the journal of the Institute of Obstetrics and Gynaecology

Al Hadi M, Geary M, Byrne P, McKenna P.
PMID: 12521824
J Obstet Gynaecol. 2001 Jul;21(4):352-4. doi: 10.1080/01443610120059860.

Shoulder dystocia (S.D.) is an obstetric emergency which may be catastrophic for both mother and baby. The aims of this study were to determine the incidence of S.D., the maternal and perinatal outcome, and which risk factors were important....

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Al Hadi M, Geary M, Byrne P, et al. Shoulder dystocia: risk factors and maternal and perinatal outcome. J Obstet Gynaecol. 2001;21(4):352-4doi: 10.1080/01443610120059860.
Al Hadi, M., Geary, M., Byrne, P., & McKenna, P. (2001). Shoulder dystocia: risk factors and maternal and perinatal outcome. Journal of obstetrics and gynaecology : the journal of the Institute of Obstetrics and Gynaecology, 21(4), 352-4. https://doi.org/10.1080/01443610120059860
Al Hadi, M, et al. "Shoulder dystocia: risk factors and maternal and perinatal outcome." Journal of obstetrics and gynaecology : the journal of the Institute of Obstetrics and Gynaecology vol. 21,4 (2001): 352-4. doi: https://doi.org/10.1080/01443610120059860
Al Hadi M, Geary M, Byrne P, McKenna P. Shoulder dystocia: risk factors and maternal and perinatal outcome. J Obstet Gynaecol. 2001 Jul;21(4):352-4. doi: 10.1080/01443610120059860. PMID: 12521824.
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Unusual solid-state behavior in a neutral [2]catenane bearing a hydrolyzable component.

Organic letters

Fallon GD, Lee MA, Langford SJ, Nichols PJ.
PMID: 14986942
Org Lett. 2004 Mar 04;6(5):655-8. doi: 10.1021/ol036116s.

A template-directed strategy to forming a bis(diimide) macrocycle through an intermediate asymmetric [2]catenane is reported. Saponification of the ester linkages within the crown ether component is much slower in the mechanically interlocked structure when compared to the free crown....

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Fallon GD, Lee MA, Langford SJ, et al. Unusual solid-state behavior in a neutral [2]catenane bearing a hydrolyzable component. Org Lett. 2004;6(5):655-8doi: 10.1021/ol036116s.
Fallon, G. D., Lee, M. A., Langford, S. J., & Nichols, P. J. (2004). Unusual solid-state behavior in a neutral [2]catenane bearing a hydrolyzable component. Organic letters, 6(5), 655-8. https://doi.org/10.1021/ol036116s
Fallon, Gary D, et al. "Unusual solid-state behavior in a neutral [2]catenane bearing a hydrolyzable component." Organic letters vol. 6,5 (2004): 655-8. doi: https://doi.org/10.1021/ol036116s
Fallon GD, Lee MA, Langford SJ, Nichols PJ. Unusual solid-state behavior in a neutral [2]catenane bearing a hydrolyzable component. Org Lett. 2004 Mar 04;6(5):655-8. doi: 10.1021/ol036116s. PMID: 14986942.
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