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4DNvestigator: time series genomic data analysis toolbox.

Nucleus (Austin, Tex.)

Lindsly S, Chen C, Liu S, Ronquist S, Dilworth S, Perlman M, Rajapakse I.
PMID: 33794739
Nucleus. 2021 Dec;12(1):58-64. doi: 10.1080/19491034.2021.1910437.

Data on genome organization and output over time, or the 4D Nucleome (4DN), require synthesis for meaningful interpretation. Development of tools for the efficient integration of these data is needed, especially for the time dimension. We present the '4DNvestigator',...

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Lindsly S, Chen C, Liu S, et al. 4DNvestigator: time series genomic data analysis toolbox. Nucleus. 2021;12(1):58-64doi: 10.1080/19491034.2021.1910437.
Lindsly, S., Chen, C., Liu, S., Ronquist, S., Dilworth, S., Perlman, M., & Rajapakse, I. (2021). 4DNvestigator: time series genomic data analysis toolbox. Nucleus (Austin, Tex.), 12(1), 58-64. https://doi.org/10.1080/19491034.2021.1910437
Lindsly, Stephen, et al. "4DNvestigator: time series genomic data analysis toolbox." Nucleus (Austin, Tex.) vol. 12,1 (2021): 58-64. doi: https://doi.org/10.1080/19491034.2021.1910437
Lindsly S, Chen C, Liu S, Ronquist S, Dilworth S, Perlman M, Rajapakse I. 4DNvestigator: time series genomic data analysis toolbox. Nucleus. 2021 Dec;12(1):58-64. doi: 10.1080/19491034.2021.1910437. PMID: 33794739; PMCID: PMC8049205.
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Heterogeneity in maternal and child mental health responses to the COVID-19 pandemic.

Early childhood research quarterly

Saleem S, Burns S, Falenchuk O, Varmuza P, Perlman M.
PMID: 34955597
Early Child Res Q. 2022 2nd Quarter;59:203-214. doi: 10.1016/j.ecresq.2021.12.004. Epub 2021 Dec 20.

We used latent profile analysis on a longitudinal dataset to examine changes in maternal and child mental health during COVID-19 and factors that may protect against declines in mental health. Participants were 183 low-income mothers (

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Saleem S, Burns S, Falenchuk O, et al. Heterogeneity in maternal and child mental health responses to the COVID-19 pandemic. Early Child Res Q. 2021;59:203-214doi: 10.1016/j.ecresq.2021.12.004.
Saleem, S., Burns, S., Falenchuk, O., Varmuza, P., & Perlman, M. (2022). Heterogeneity in maternal and child mental health responses to the COVID-19 pandemic. Early childhood research quarterly, 59203-214. https://doi.org/10.1016/j.ecresq.2021.12.004
Saleem, Sumayya, et al. "Heterogeneity in maternal and child mental health responses to the COVID-19 pandemic." Early childhood research quarterly vol. 59 (2022): 203-214. doi: https://doi.org/10.1016/j.ecresq.2021.12.004
Saleem S, Burns S, Falenchuk O, Varmuza P, Perlman M. Heterogeneity in maternal and child mental health responses to the COVID-19 pandemic. Early Child Res Q. 2022 2nd Quarter;59:203-214. doi: 10.1016/j.ecresq.2021.12.004. Epub 2021 Dec 20. PMID: 34955597; PMCID: PMC8685196.
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Associations between dietary fatty acid patterns and cognitive function in the Hispanic Community Health Study/Study of Latinos.

The British journal of nutrition

Karazurna NA, Porter CM, Aytur S, Scott T, Mattei J, Noel SE, Gonzalez HM, Mossavar-Rahmani Y, Sotres-Alvarez D, Gallo LC, Daviglus ML, Van Horn L, Elfassy T, Gellman MD, Moncrieft AE, Tucker KL, Kaplan RC, Bigornia SJ.
PMID: 34433507
Br J Nutr. 2021 Aug 26;1-35. doi: 10.1017/S0007114521003275. Epub 2021 Aug 26.

Our objective was to quantify the cross-sectional associations between dietary fatty acid (DFA) patterns and cognitive function among Hispanic/Latino adults. This study included data from 8,942 participants of the Hispanic Community Health Study/Study of Latinos, a population-based cohort study...

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Karazurna NA, Porter CM, Aytur S, et al. Associations between dietary fatty acid patterns and cognitive function in the Hispanic Community Health Study/Study of Latinos. Br J Nutr. 2021;1-35doi: 10.1017/S0007114521003275.
Karazurna, N. A., Porter, C. M., Aytur, S., Scott, T., Mattei, J., Noel, S. E., Gonzalez, H. M., Mossavar-Rahmani, Y., Sotres-Alvarez, D., Gallo, L. C., Daviglus, M. L., Van Horn, L., Elfassy, T., Gellman, M. D., Moncrieft, A. E., Tucker, K. L., Kaplan, R. C., & Bigornia, S. J. (2021). Associations between dietary fatty acid patterns and cognitive function in the Hispanic Community Health Study/Study of Latinos. The British journal of nutrition, 1-35. https://doi.org/10.1017/S0007114521003275
Karazurna, Nicole A, et al. "Associations between dietary fatty acid patterns and cognitive function in the Hispanic Community Health Study/Study of Latinos." The British journal of nutrition vol. (2021): 1-35. doi: https://doi.org/10.1017/S0007114521003275
Karazurna NA, Porter CM, Aytur S, Scott T, Mattei J, Noel SE, Gonzalez HM, Mossavar-Rahmani Y, Sotres-Alvarez D, Gallo LC, Daviglus ML, Van Horn L, Elfassy T, Gellman MD, Moncrieft AE, Tucker KL, Kaplan RC, Bigornia SJ. Associations between dietary fatty acid patterns and cognitive function in the Hispanic Community Health Study/Study of Latinos. Br J Nutr. 2021 Aug 26;1-35. doi: 10.1017/S0007114521003275. Epub 2021 Aug 26. PMID: 34433507.
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Improvement in Glucose Regulation Using a Digital Tracker and Continuous Glucose Monitoring in Healthy Adults and Those with Type 2 Diabetes.

Diabetes therapy : research, treatment and education of diabetes and related disorders

Dehghani Zahedani A, Shariat Torbaghan S, Rahili S, Karlin K, Scilley D, Thakkar R, Saberi M, Hashemi N, Perelman D, Aghaeepour N, McLaughlin T, Snyder MP.
PMID: 34047962
Diabetes Ther. 2021 Jul;12(7):1871-1886. doi: 10.1007/s13300-021-01081-3. Epub 2021 May 28.

INTRODUCTION: While continuous glucose monitoring (CGM) has been shown to decrease both hyper- and hypoglycemia in insulin-treated diabetes, its value in non-insulin-treated type 2 diabetes (T2D) and prediabetes is unclear. Studies examining the reduction in hyperglycemia with the use...

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Dehghani Zahedani A, Shariat Torbaghan S, Rahili S, et al. Improvement in Glucose Regulation Using a Digital Tracker and Continuous Glucose Monitoring in Healthy Adults and Those with Type 2 Diabetes. Diabetes Ther. 2021;12(7):1871-1886doi: 10.1007/s13300-021-01081-3.
Dehghani Zahedani, A., Shariat Torbaghan, S., Rahili, S., Karlin, K., Scilley, D., Thakkar, R., Saberi, M., Hashemi, N., Perelman, D., Aghaeepour, N., McLaughlin, T., & Snyder, M. P. (2021). Improvement in Glucose Regulation Using a Digital Tracker and Continuous Glucose Monitoring in Healthy Adults and Those with Type 2 Diabetes. Diabetes therapy : research, treatment and education of diabetes and related disorders, 12(7), 1871-1886. https://doi.org/10.1007/s13300-021-01081-3
Dehghani Zahedani, Ashkan, et al. "Improvement in Glucose Regulation Using a Digital Tracker and Continuous Glucose Monitoring in Healthy Adults and Those with Type 2 Diabetes." Diabetes therapy : research, treatment and education of diabetes and related disorders vol. 12,7 (2021): 1871-1886. doi: https://doi.org/10.1007/s13300-021-01081-3
Dehghani Zahedani A, Shariat Torbaghan S, Rahili S, Karlin K, Scilley D, Thakkar R, Saberi M, Hashemi N, Perelman D, Aghaeepour N, McLaughlin T, Snyder MP. Improvement in Glucose Regulation Using a Digital Tracker and Continuous Glucose Monitoring in Healthy Adults and Those with Type 2 Diabetes. Diabetes Ther. 2021 Jul;12(7):1871-1886. doi: 10.1007/s13300-021-01081-3. Epub 2021 May 28. PMID: 34047962; PMCID: PMC8266934.
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Vocal communication of magnitude across language, age, and auditory experience.

Journal of experimental psychology. General

Perlman M, Paul J, Lupyan G.
PMID: 34498908
J Exp Psychol Gen. 2021 Sep 09; doi: 10.1037/xge0001103. Epub 2021 Sep 09.

Like many other vocalizing vertebrates, humans convey information about their body size through the sound of their voice. Vocalizations of larger animals are typically longer in duration, louder in intensity, and lower in frequency. We investigated people's ability to...

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Perlman M, Paul J, Lupyan G. Vocal communication of magnitude across language, age, and auditory experience. J Exp Psychol Gen. 2021;doi: 10.1037/xge0001103.
Perlman, M., Paul, J., & Lupyan, G. (2021). Vocal communication of magnitude across language, age, and auditory experience. Journal of experimental psychology. General, . https://doi.org/10.1037/xge0001103
Perlman, Marcus, et al. "Vocal communication of magnitude across language, age, and auditory experience." Journal of experimental psychology. General vol. (2021). doi: https://doi.org/10.1037/xge0001103
Perlman M, Paul J, Lupyan G. Vocal communication of magnitude across language, age, and auditory experience. J Exp Psychol Gen. 2021 Sep 09; doi: 10.1037/xge0001103. Epub 2021 Sep 09. PMID: 34498908.
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The Contribution of Surface Tension-Dependent Alveolar Septal Stress Concentrations to Ventilation-Induced Lung Injury in the Acute Respiratory Distress Syndrome.

Frontiers in physiology

Perlman CE.
PMID: 32670073
Front Physiol. 2020 Jun 26;11:388. doi: 10.3389/fphys.2020.00388. eCollection 2020.

In the acute respiratory distress syndrome (ARDS), surface tension,

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Perlman CE. The Contribution of Surface Tension-Dependent Alveolar Septal Stress Concentrations to Ventilation-Induced Lung Injury in the Acute Respiratory Distress Syndrome. Front Physiol. 2020;11:388doi: 10.3389/fphys.2020.00388.
Perlman, C. E. (2020). The Contribution of Surface Tension-Dependent Alveolar Septal Stress Concentrations to Ventilation-Induced Lung Injury in the Acute Respiratory Distress Syndrome. Frontiers in physiology, 11388. https://doi.org/10.3389/fphys.2020.00388
Perlman, Carrie E. "The Contribution of Surface Tension-Dependent Alveolar Septal Stress Concentrations to Ventilation-Induced Lung Injury in the Acute Respiratory Distress Syndrome." Frontiers in physiology vol. 11 (2020): 388. doi: https://doi.org/10.3389/fphys.2020.00388
Perlman CE. The Contribution of Surface Tension-Dependent Alveolar Septal Stress Concentrations to Ventilation-Induced Lung Injury in the Acute Respiratory Distress Syndrome. Front Physiol. 2020 Jun 26;11:388. doi: 10.3389/fphys.2020.00388. eCollection 2020. PMID: 32670073; PMCID: PMC7332732.
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Health and Wellness Coaching in Serving the Needs of Today's Patients: A Primer for Healthcare Professionals.

Global advances in health and medicine

Perlman AI, Abu Dabrh AM.
PMID: 33014630
Glob Adv Health Med. 2020 Sep 21;9:2164956120959274. doi: 10.1177/2164956120959274. eCollection 2020.

The past six decades have been marked by leaps and bounds in medical advances, while concurrently clinical outcomes and the quality of life continued to lag or decline. There is a need for more comprehensive approaches to delivering healthcare...

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Perlman AI, Abu Dabrh AM. Health and Wellness Coaching in Serving the Needs of Today's Patients: A Primer for Healthcare Professionals. Glob Adv Health Med. 2020;9:2164956120959274doi: 10.1177/2164956120959274.
Perlman, A. I., & Abu Dabrh, A. M. (2020). Health and Wellness Coaching in Serving the Needs of Today's Patients: A Primer for Healthcare Professionals. Global advances in health and medicine, 92164956120959274. https://doi.org/10.1177/2164956120959274
Perlman, Adam I, and Abu Dabrh, Abd Moain. "Health and Wellness Coaching in Serving the Needs of Today's Patients: A Primer for Healthcare Professionals." Global advances in health and medicine vol. 9 (2020): 2164956120959274. doi: https://doi.org/10.1177/2164956120959274
Perlman AI, Abu Dabrh AM. Health and Wellness Coaching in Serving the Needs of Today's Patients: A Primer for Healthcare Professionals. Glob Adv Health Med. 2020 Sep 21;9:2164956120959274. doi: 10.1177/2164956120959274. eCollection 2020. PMID: 33014630; PMCID: PMC7509728.
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How High? Trends in Cannabis Use Prior to First Admission to Inpatient Psychiatry in Ontario, Canada, between 2007 and 2017: À quelle hauteur? Les tendances de l'usage du cannabis avant la première hospitalisation en psychiatrie en Ontario, Canada entre 2007 et 2017.

Canadian journal of psychiatry. Revue canadienne de psychiatrie

McGuckin T, Ferro MA, Hammond D, Stewart S, Maloney-Hall B, Madi N, Porath A, Perlman CM.
PMID: 33380219
Can J Psychiatry. 2020 Dec 31;706743720984679. doi: 10.1177/0706743720984679. Epub 2020 Dec 31.

OBJECTIVES: To examine the trends in cannabis use within 30 days of first admission to inpatient psychiatry in Ontario, Canada, between 2007 and 2017, and the characteristics of persons reporting cannabis use.METHODS: A retrospective cross-sectional analysis was conducted for...

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McGuckin T, Ferro MA, Hammond D, et al. How High? Trends in Cannabis Use Prior to First Admission to Inpatient Psychiatry in Ontario, Canada, between 2007 and 2017: À quelle hauteur? Les tendances de l'usage du cannabis avant la première hospitalisation en psychiatrie en Ontario, Canada entre 2007 et 2017. Can J Psychiatry. 2020;706743720984679doi: 10.1177/0706743720984679.
McGuckin, T., Ferro, M. A., Hammond, D., Stewart, S., Maloney-Hall, B., Madi, N., Porath, A., & Perlman, C. M. (2020). How High? Trends in Cannabis Use Prior to First Admission to Inpatient Psychiatry in Ontario, Canada, between 2007 and 2017: À quelle hauteur? Les tendances de l'usage du cannabis avant la première hospitalisation en psychiatrie en Ontario, Canada entre 2007 et 2017. Canadian journal of psychiatry. Revue canadienne de psychiatrie, 706743720984679. https://doi.org/10.1177/0706743720984679
McGuckin, Taylor, et al. "How High? Trends in Cannabis Use Prior to First Admission to Inpatient Psychiatry in Ontario, Canada, between 2007 and 2017: À quelle hauteur? Les tendances de l'usage du cannabis avant la première hospitalisation en psychiatrie en Ontario, Canada entre 2007 et 2017." Canadian journal of psychiatry. Revue canadienne de psychiatrie vol. (2020): 706743720984679. doi: https://doi.org/10.1177/0706743720984679
McGuckin T, Ferro MA, Hammond D, Stewart S, Maloney-Hall B, Madi N, Porath A, Perlman CM. How High? Trends in Cannabis Use Prior to First Admission to Inpatient Psychiatry in Ontario, Canada, between 2007 and 2017: À quelle hauteur? Les tendances de l'usage du cannabis avant la première hospitalisation en psychiatrie en Ontario, Canada entre 2007 et 2017. Can J Psychiatry. 2020 Dec 31;706743720984679. doi: 10.1177/0706743720984679. Epub 2020 Dec 31. PMID: 33380219.
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Sexual and gender minority individuals report higher rates of lifetime traumas and current PTSD than cisgender heterosexual individuals admitted to residential eating disorder treatment.

Eating and weight disorders : EWD

Brewerton TD, Suro G, Gavidia I, Perlman MM.
PMID: 34057704
Eat Weight Disord. 2021 May 31; doi: 10.1007/s40519-021-01222-4. Epub 2021 May 31.

OBJECTIVE: Trauma and posttraumatic stress disorder (PTSD) are associated with eating disorders (EDs), which occur across all sexual orientations and gender identities. Prior traumas and PTSD also are reported to occur significantly more frequently in individuals identifying as lesbian,...

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Brewerton TD, Suro G, Gavidia I, et al. Sexual and gender minority individuals report higher rates of lifetime traumas and current PTSD than cisgender heterosexual individuals admitted to residential eating disorder treatment. Eat Weight Disord. 2021;doi: 10.1007/s40519-021-01222-4.
Brewerton, T. D., Suro, G., Gavidia, I., & Perlman, M. M. (2021). Sexual and gender minority individuals report higher rates of lifetime traumas and current PTSD than cisgender heterosexual individuals admitted to residential eating disorder treatment. Eating and weight disorders : EWD, . https://doi.org/10.1007/s40519-021-01222-4
Brewerton, Timothy D, et al. "Sexual and gender minority individuals report higher rates of lifetime traumas and current PTSD than cisgender heterosexual individuals admitted to residential eating disorder treatment." Eating and weight disorders : EWD vol. (2021). doi: https://doi.org/10.1007/s40519-021-01222-4
Brewerton TD, Suro G, Gavidia I, Perlman MM. Sexual and gender minority individuals report higher rates of lifetime traumas and current PTSD than cisgender heterosexual individuals admitted to residential eating disorder treatment. Eat Weight Disord. 2021 May 31; doi: 10.1007/s40519-021-01222-4. Epub 2021 May 31. PMID: 34057704.
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Implications for preeclampsia: hypoxia-induced Notch promotes trophoblast migration.

Reproduction (Cambridge, England)

Perlman BE, Merriam AA, Lemenze A, Zhao Q, Begum S, Nair M, Wu T, Wapner RJ, Kitajewski JK, Shawber CJ, Douglas NC.
PMID: 33784241
Reproduction. 2021 May 14;161(6):681-696. doi: 10.1530/REP-20-0483.

In the first trimester of human pregnancy, low oxygen tension or hypoxia is essential for proper placentation and placenta function. Low oxygen levels and activation of signaling pathways have been implicated as critical mediators in the promotion of trophoblast...

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Perlman BE, Merriam AA, Lemenze A, et al. Implications for preeclampsia: hypoxia-induced Notch promotes trophoblast migration. Reproduction. 2021;161(6):681-696doi: 10.1530/REP-20-0483.
Perlman, B. E., Merriam, A. A., Lemenze, A., Zhao, Q., Begum, S., Nair, M., Wu, T., Wapner, R. J., Kitajewski, J. K., Shawber, C. J., & Douglas, N. C. (2021). Implications for preeclampsia: hypoxia-induced Notch promotes trophoblast migration. Reproduction (Cambridge, England), 161(6), 681-696. https://doi.org/10.1530/REP-20-0483
Perlman, Barry E, et al. "Implications for preeclampsia: hypoxia-induced Notch promotes trophoblast migration." Reproduction (Cambridge, England) vol. 161,6 (2021): 681-696. doi: https://doi.org/10.1530/REP-20-0483
Perlman BE, Merriam AA, Lemenze A, Zhao Q, Begum S, Nair M, Wu T, Wapner RJ, Kitajewski JK, Shawber CJ, Douglas NC. Implications for preeclampsia: hypoxia-induced Notch promotes trophoblast migration. Reproduction. 2021 May 14;161(6):681-696. doi: 10.1530/REP-20-0483. PMID: 33784241; PMCID: PMC8403268.
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Safety of Deep Enteroscopy and Capsule Endoscopy in LVAD Patients: Case Report and Literature Review.

Gastroenterology research

Kwong WT, Pearlman M, Kalmaz D.
PMID: 27785314
Gastroenterology Res. 2015 Dec;8(6):309-312. doi: 10.14740/gr666w. Epub 2015 Dec 31.

Patients with a left ventricular assist device (LVAD) have increased risk of gastrointestinal (GI) bleeding. They are prone to develop angiodysplasia of the small intestine, and have a higher risk of bleeding as these patients are all required to...

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Kwong WT, Pearlman M, Kalmaz D. Safety of Deep Enteroscopy and Capsule Endoscopy in LVAD Patients: Case Report and Literature Review. Gastroenterology Res. 2015;8(6):309-312doi: 10.14740/gr666w.
Kwong, W. T., Pearlman, M., & Kalmaz, D. (2015). Safety of Deep Enteroscopy and Capsule Endoscopy in LVAD Patients: Case Report and Literature Review. Gastroenterology research, 8(6), 309-312. https://doi.org/10.14740/gr666w
Kwong, Wilson Tak-Yu, et al. "Safety of Deep Enteroscopy and Capsule Endoscopy in LVAD Patients: Case Report and Literature Review." Gastroenterology research vol. 8,6 (2015): 309-312. doi: https://doi.org/10.14740/gr666w
Kwong WT, Pearlman M, Kalmaz D. Safety of Deep Enteroscopy and Capsule Endoscopy in LVAD Patients: Case Report and Literature Review. Gastroenterology Res. 2015 Dec;8(6):309-312. doi: 10.14740/gr666w. Epub 2015 Dec 31. PMID: 27785314; PMCID: PMC5051031.
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Clinical Presentation and Treatment of High-Risk Sarcoidosis.

Annals of the American Thoracic Society

Perlman DM, Sudheendra MT, Furuya Y, Shenoy C, Kalra R, Roukoz H, Markowitz J, Maier LA, Bhargava M.
PMID: 34524933
Ann Am Thorac Soc. 2021 Dec;18(12):1935-1947. doi: 10.1513/AnnalsATS.202102-212CME.

Sarcoidosis is a multisystem disease of unknown cause with heterogeneous clinical manifestations and variable course. Spontaneous remissions occur in some patients, whereas others have progressive disease impacting survival, organ function, and quality of life. Four high-risk sarcoidosis phenotypes associated...

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Perlman DM, Sudheendra MT, Furuya Y, et al. Clinical Presentation and Treatment of High-Risk Sarcoidosis. Ann Am Thorac Soc. 2021;18(12):1935-1947doi: 10.1513/AnnalsATS.202102-212CME.
Perlman, D. M., Sudheendra, M. T., Furuya, Y., Shenoy, C., Kalra, R., Roukoz, H., Markowitz, J., Maier, L. A., & Bhargava, M. (2021). Clinical Presentation and Treatment of High-Risk Sarcoidosis. Annals of the American Thoracic Society, 18(12), 1935-1947. https://doi.org/10.1513/AnnalsATS.202102-212CME
Perlman, David M, et al. "Clinical Presentation and Treatment of High-Risk Sarcoidosis." Annals of the American Thoracic Society vol. 18,12 (2021): 1935-1947. doi: https://doi.org/10.1513/AnnalsATS.202102-212CME
Perlman DM, Sudheendra MT, Furuya Y, Shenoy C, Kalra R, Roukoz H, Markowitz J, Maier LA, Bhargava M. Clinical Presentation and Treatment of High-Risk Sarcoidosis. Ann Am Thorac Soc. 2021 Dec;18(12):1935-1947. doi: 10.1513/AnnalsATS.202102-212CME. PMID: 34524933.
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Showing 25 to 36 of 161 entries