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Structure characterization of the mannofucogalactan isolated from fruit bodies of Quinine conk Fomitopsis officinalis.

Carbohydrate polymers

Golovchenko VV, Khramova DS, Shinen N, Jamsranjav G, Chizhov AO, Shashkov AS.
PMID: 30143116
Carbohydr Polym. 2018 Nov 01;199:161-169. doi: 10.1016/j.carbpol.2018.06.103. Epub 2018 Jun 26.

The mannofucogalactan as a major component of water extract was obtained from fruit bodies of Fomitopsis officinalis by extraction with boiling water followed by deproteination, decoloration, and purification using anion-exchange chromatography and size exclusion chromatography. Its structure was characterized...

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Golovchenko VV, Khramova DS, Shinen N, et al. Structure characterization of the mannofucogalactan isolated from fruit bodies of Quinine conk Fomitopsis officinalis. Carbohydr Polym. 2018;199:161-169doi: 10.1016/j.carbpol.2018.06.103.
Golovchenko, V. V., Khramova, D. S., Shinen, N., Jamsranjav, G., Chizhov, A. O., & Shashkov, A. S. (2018). Structure characterization of the mannofucogalactan isolated from fruit bodies of Quinine conk Fomitopsis officinalis. Carbohydrate polymers, 199161-169. https://doi.org/10.1016/j.carbpol.2018.06.103
Golovchenko, Victoria V, et al. "Structure characterization of the mannofucogalactan isolated from fruit bodies of Quinine conk Fomitopsis officinalis." Carbohydrate polymers vol. 199 (2018): 161-169. doi: https://doi.org/10.1016/j.carbpol.2018.06.103
Golovchenko VV, Khramova DS, Shinen N, Jamsranjav G, Chizhov AO, Shashkov AS. Structure characterization of the mannofucogalactan isolated from fruit bodies of Quinine conk Fomitopsis officinalis. Carbohydr Polym. 2018 Nov 01;199:161-169. doi: 10.1016/j.carbpol.2018.06.103. Epub 2018 Jun 26. PMID: 30143116.
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Network reconstruction and validation of the Snf1/AMPK pathway in baker's yeast based on a comprehensive literature review.

NPJ systems biology and applications

Lubitz T, Welkenhuysen N, Shashkova S, Bendrioua L, Hohmann S, Klipp E, Krantz M.
PMID: 28725459
NPJ Syst Biol Appl. 2015 Oct 22;1:15007. doi: 10.1038/npjsba.2015.7. eCollection 2015.

BACKGROUND/OBJECTIVES: The SNF1/AMPK protein kinase has a central role in energy homeostasis in eukaryotic cells. It is activated by energy depletion and stimulates processes leading to the production of ATP while it downregulates ATP-consuming processes. The yeast SNF1 complex...

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Lubitz T, Welkenhuysen N, Shashkova S, et al. Network reconstruction and validation of the Snf1/AMPK pathway in baker's yeast based on a comprehensive literature review. NPJ Syst Biol Appl. 2015;1:15007doi: 10.1038/npjsba.2015.7.
Lubitz, T., Welkenhuysen, N., Shashkova, S., Bendrioua, L., Hohmann, S., Klipp, E., & Krantz, M. (2015). Network reconstruction and validation of the Snf1/AMPK pathway in baker's yeast based on a comprehensive literature review. NPJ systems biology and applications, 115007. https://doi.org/10.1038/npjsba.2015.7
Lubitz, Timo, et al. "Network reconstruction and validation of the Snf1/AMPK pathway in baker's yeast based on a comprehensive literature review." NPJ systems biology and applications vol. 1 (2015): 15007. doi: https://doi.org/10.1038/npjsba.2015.7
Lubitz T, Welkenhuysen N, Shashkova S, Bendrioua L, Hohmann S, Klipp E, Krantz M. Network reconstruction and validation of the Snf1/AMPK pathway in baker's yeast based on a comprehensive literature review. NPJ Syst Biol Appl. 2015 Oct 22;1:15007. doi: 10.1038/npjsba.2015.7. eCollection 2015. PMID: 28725459; PMCID: PMC5516868.
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Composition of the Biofilm Matrix of .

Frontiers in microbiology

Gannesen AV, Zdorovenko EL, Botchkova EA, Hardouin J, Massier S, Kopitsyn DS, Gorbachevskii MV, Kadykova AA, Shashkov AS, Zhurina MV, Netrusov AI, Knirel YA, Plakunov VK, Feuilloley MGJ.
PMID: 31293526
Front Microbiol. 2019 Jun 21;10:1284. doi: 10.3389/fmicb.2019.01284. eCollection 2019.

In skin,

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Gannesen AV, Zdorovenko EL, Botchkova EA, et al. Composition of the Biofilm Matrix of . Front Microbiol. 2019;10:1284doi: 10.3389/fmicb.2019.01284.
Gannesen, A. V., Zdorovenko, E. L., Botchkova, E. A., Hardouin, J., Massier, S., Kopitsyn, D. S., Gorbachevskii, M. V., Kadykova, A. A., Shashkov, A. S., Zhurina, M. V., Netrusov, A. I., Knirel, Y. A., Plakunov, V. K., & Feuilloley, M. G. J. (2019). Composition of the Biofilm Matrix of . Frontiers in microbiology, 101284. https://doi.org/10.3389/fmicb.2019.01284
Gannesen, Andrei V, et al. "Composition of the Biofilm Matrix of ." Frontiers in microbiology vol. 10 (2019): 1284. doi: https://doi.org/10.3389/fmicb.2019.01284
Gannesen AV, Zdorovenko EL, Botchkova EA, Hardouin J, Massier S, Kopitsyn DS, Gorbachevskii MV, Kadykova AA, Shashkov AS, Zhurina MV, Netrusov AI, Knirel YA, Plakunov VK, Feuilloley MGJ. Composition of the Biofilm Matrix of . Front Microbiol. 2019 Jun 21;10:1284. doi: 10.3389/fmicb.2019.01284. eCollection 2019. PMID: 31293526; PMCID: PMC6598116.
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Characterising Maturation of GFP and mCherry of Genomically Integrated Fusions in .

Bio-protocol

Shashkova S, Wollman AJ, Hohmann S, Leake MC.
PMID: 29430484
Bio Protoc. 2018 Jan 20;8(2):e2710. doi: 10.21769/BioProtoc.2710.

Single-molecule fluorescence microscopy enables unrivaled sub-cellular quantitation of genomically encoded fusions of native proteins with fluorescent protein reporters. Fluorescent proteins must undergo

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Shashkova S, Wollman AJ, Hohmann S, et al. Characterising Maturation of GFP and mCherry of Genomically Integrated Fusions in . Bio Protoc. 2018;8(2):e2710doi: 10.21769/BioProtoc.2710.
Shashkova, S., Wollman, A. J., Hohmann, S., & Leake, M. C. (2018). Characterising Maturation of GFP and mCherry of Genomically Integrated Fusions in . Bio-protocol, 8(2), e2710. https://doi.org/10.21769/BioProtoc.2710
Shashkova, Sviatlana, et al. "Characterising Maturation of GFP and mCherry of Genomically Integrated Fusions in ." Bio-protocol vol. 8,2 (2018): e2710. doi: https://doi.org/10.21769/BioProtoc.2710
Shashkova S, Wollman AJ, Hohmann S, Leake MC. Characterising Maturation of GFP and mCherry of Genomically Integrated Fusions in . Bio Protoc. 2018 Jan 20;8(2):e2710. doi: 10.21769/BioProtoc.2710. PMID: 29430484; PMCID: PMC5802385.
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Corrigendum to "Structure of the O-polysaccharide of Escherichia coli O87" [Carbohydr. Res. 412 (2015) 15-18].

Carbohydrate research

Zdorovenko EL, Golomidova AK, Prokhorov NS, Shashkov AS, Wang L, Letarov AV, Knirel YA.
PMID: 29775670
Carbohydr Res. 2018 Jul 15;464:1. doi: 10.1016/j.carres.2018.04.013. Epub 2018 May 25.

No abstract available.

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Zdorovenko EL, Golomidova AK, Prokhorov NS, et al. Corrigendum to "Structure of the O-polysaccharide of Escherichia coli O87" [Carbohydr. Res. 412 (2015) 15-18]. Carbohydr Res. 2018;464:1doi: 10.1016/j.carres.2018.04.013.
Zdorovenko, E. L., Golomidova, A. K., Prokhorov, N. S., Shashkov, A. S., Wang, L., Letarov, A. V., & Knirel, Y. A. (2018). Corrigendum to "Structure of the O-polysaccharide of Escherichia coli O87" [Carbohydr. Res. 412 (2015) 15-18]. Carbohydrate research, 4641. https://doi.org/10.1016/j.carres.2018.04.013
Zdorovenko, Evelina L, et al. "Corrigendum to "Structure of the O-polysaccharide of Escherichia coli O87" [Carbohydr. Res. 412 (2015) 15-18]." Carbohydrate research vol. 464 (2018): 1. doi: https://doi.org/10.1016/j.carres.2018.04.013
Zdorovenko EL, Golomidova AK, Prokhorov NS, Shashkov AS, Wang L, Letarov AV, Knirel YA. Corrigendum to "Structure of the O-polysaccharide of Escherichia coli O87" [Carbohydr. Res. 412 (2015) 15-18]. Carbohydr Res. 2018 Jul 15;464:1. doi: 10.1016/j.carres.2018.04.013. Epub 2018 May 25. PMID: 29775670.
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Lamin A/C recruits ssDNA protective proteins RPA and RAD51 to stalled replication forks to maintain fork stability.

The Journal of biological chemistry

Graziano S, Coll-Bonfill N, Teodoro-Castro B, Kuppa S, Jackson J, Shashkova E, Mahajan U, Vindigni A, Antony E, Gonzalo S.
PMID: 34648766
J Biol Chem. 2021 Nov;297(5):101301. doi: 10.1016/j.jbc.2021.101301. Epub 2021 Oct 11.

Lamin A/C provides a nuclear scaffold for compartmentalization of genome function that is important for genome integrity. Lamin A/C dysfunction is associated with cancer, aging, and degenerative diseases. The mechanisms whereby lamin A/C regulates genome stability remain poorly understood....

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Graziano S, Coll-Bonfill N, Teodoro-Castro B, et al. Lamin A/C recruits ssDNA protective proteins RPA and RAD51 to stalled replication forks to maintain fork stability. J Biol Chem. 2021;297(5):101301doi: 10.1016/j.jbc.2021.101301.
Graziano, S., Coll-Bonfill, N., Teodoro-Castro, B., Kuppa, S., Jackson, J., Shashkova, E., Mahajan, U., Vindigni, A., Antony, E., & Gonzalo, S. (2021). Lamin A/C recruits ssDNA protective proteins RPA and RAD51 to stalled replication forks to maintain fork stability. The Journal of biological chemistry, 297(5), 101301. https://doi.org/10.1016/j.jbc.2021.101301
Graziano, Simona, et al. "Lamin A/C recruits ssDNA protective proteins RPA and RAD51 to stalled replication forks to maintain fork stability." The Journal of biological chemistry vol. 297,5 (2021): 101301. doi: https://doi.org/10.1016/j.jbc.2021.101301
Graziano S, Coll-Bonfill N, Teodoro-Castro B, Kuppa S, Jackson J, Shashkova E, Mahajan U, Vindigni A, Antony E, Gonzalo S. Lamin A/C recruits ssDNA protective proteins RPA and RAD51 to stalled replication forks to maintain fork stability. J Biol Chem. 2021 Nov;297(5):101301. doi: 10.1016/j.jbc.2021.101301. Epub 2021 Oct 11. PMID: 34648766; PMCID: PMC8571089.
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Ecological data in Darwin Core: the case of earthworm surveys.

Biodiversity data journal

Shashkov M, Ivanova N, Wieczorek J.
PMID: 34924798
Biodivers Data J. 2021 Dec 08;9:e71292. doi: 10.3897/BDJ.9.e71292. eCollection 2021.

BACKGROUND: This sampling-event dataset provides primary data about species diversity, age structure, abundance (in terms of biomass and density) and seasonal activity of earthworms (Lumbricidae). The study was carried out in old-growth broad-leaved and young forests of two protected...

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Shashkov M, Ivanova N, Wieczorek J. Ecological data in Darwin Core: the case of earthworm surveys. Biodivers Data J. 2021;9:e71292doi: 10.3897/BDJ.9.e71292.
Shashkov, M., Ivanova, N., & Wieczorek, J. (2021). Ecological data in Darwin Core: the case of earthworm surveys. Biodiversity data journal, 9e71292. https://doi.org/10.3897/BDJ.9.e71292
Shashkov, Maxim, et al. "Ecological data in Darwin Core: the case of earthworm surveys." Biodiversity data journal vol. 9 (2021): e71292. doi: https://doi.org/10.3897/BDJ.9.e71292
Shashkov M, Ivanova N, Wieczorek J. Ecological data in Darwin Core: the case of earthworm surveys. Biodivers Data J. 2021 Dec 08;9:e71292. doi: 10.3897/BDJ.9.e71292. eCollection 2021. PMID: 34924798; PMCID: PMC8674212.
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Structure of cell-wall glycopolymers of Micrococcus luteus C01.

Carbohydrate research

Zdorovenko EL, Gannesen AV, Dmitrenok AS, Zhurina MV, Mart'yanov SV, Shashkov AS.
PMID: 34087653
Carbohydr Res. 2021 Aug;506:108356. doi: 10.1016/j.carres.2021.108356. Epub 2021 May 28.

Glycopolymers of two types were isolated from the cell wall of Micrococcus luteus C01 by stepwise extraction with cold and hot 10% aq CCl

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Zdorovenko EL, Gannesen AV, Dmitrenok AS, et al. Structure of cell-wall glycopolymers of Micrococcus luteus C01. Carbohydr Res. 2021;506:108356doi: 10.1016/j.carres.2021.108356.
Zdorovenko, E. L., Gannesen, A. V., Dmitrenok, A. S., Zhurina, M. V., Mart'yanov, S. V., & Shashkov, A. S. (2021). Structure of cell-wall glycopolymers of Micrococcus luteus C01. Carbohydrate research, 506108356. https://doi.org/10.1016/j.carres.2021.108356
Zdorovenko, Evelina L, et al. "Structure of cell-wall glycopolymers of Micrococcus luteus C01." Carbohydrate research vol. 506 (2021): 108356. doi: https://doi.org/10.1016/j.carres.2021.108356
Zdorovenko EL, Gannesen AV, Dmitrenok AS, Zhurina MV, Mart'yanov SV, Shashkov AS. Structure of cell-wall glycopolymers of Micrococcus luteus C01. Carbohydr Res. 2021 Aug;506:108356. doi: 10.1016/j.carres.2021.108356. Epub 2021 May 28. PMID: 34087653.
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Correlation of Acinetobacter baumannii K144 and K86 capsular polysaccharide structures with genes at the K locus reveals the involvement of a novel multifunctional rhamnosyltransferase for structural synthesis.

International journal of biological macromolecules

Kenyon JJ, Kasimova AA, Sviridova AN, Shpirt AM, Shneider MM, Mikhaylova YV, Shelenkov AA, Popova AV, Perepelov AV, Shashkov AS, Dmitrenok AS, Chizov AO, Knirel YA.
PMID: 34757131
Int J Biol Macromol. 2021 Dec 15;193:1294-1300. doi: 10.1016/j.ijbiomac.2021.10.178. Epub 2021 Oct 30.

Whole genome sequence from Acinetobacter baumannii isolate Ab-46-1632 reveals a novel KL144 capsular polysaccharide (CPS) biosynthesis gene cluster, which carries genes for d-glucuronic acid (D-GlcA) and l-rhamnose (l-Rha) synthesis. The CPS was extracted from Ab-46-1632 and studied by

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Kenyon JJ, Kasimova AA, Sviridova AN, et al. Correlation of Acinetobacter baumannii K144 and K86 capsular polysaccharide structures with genes at the K locus reveals the involvement of a novel multifunctional rhamnosyltransferase for structural synthesis. Int J Biol Macromol. 2021;193:1294-1300doi: 10.1016/j.ijbiomac.2021.10.178.
Kenyon, J. J., Kasimova, A. A., Sviridova, A. N., Shpirt, A. M., Shneider, M. M., Mikhaylova, Y. V., Shelenkov, A. A., Popova, A. V., Perepelov, A. V., Shashkov, A. S., Dmitrenok, A. S., Chizov, A. O., & Knirel, Y. A. (2021). Correlation of Acinetobacter baumannii K144 and K86 capsular polysaccharide structures with genes at the K locus reveals the involvement of a novel multifunctional rhamnosyltransferase for structural synthesis. International journal of biological macromolecules, 1931294-1300. https://doi.org/10.1016/j.ijbiomac.2021.10.178
Kenyon, Johanna J, et al. "Correlation of Acinetobacter baumannii K144 and K86 capsular polysaccharide structures with genes at the K locus reveals the involvement of a novel multifunctional rhamnosyltransferase for structural synthesis." International journal of biological macromolecules vol. 193 (2021): 1294-1300. doi: https://doi.org/10.1016/j.ijbiomac.2021.10.178
Kenyon JJ, Kasimova AA, Sviridova AN, Shpirt AM, Shneider MM, Mikhaylova YV, Shelenkov AA, Popova AV, Perepelov AV, Shashkov AS, Dmitrenok AS, Chizov AO, Knirel YA. Correlation of Acinetobacter baumannii K144 and K86 capsular polysaccharide structures with genes at the K locus reveals the involvement of a novel multifunctional rhamnosyltransferase for structural synthesis. Int J Biol Macromol. 2021 Dec 15;193:1294-1300. doi: 10.1016/j.ijbiomac.2021.10.178. Epub 2021 Oct 30. PMID: 34757131.
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Physical Activity Is Associated With Sleep Quality: Results of the ESSE-RF Epidemiological Study.

Frontiers in psychology

Dubinina E, Korostovtseva LS, Rotar O, Amelina V, Boyarinova M, Bochkarev M, Shashkova T, Baranova E, Libis R, Duplyakov D, Sviryaev Y, Konradi A, Shlyakhto E.
PMID: 34447339
Front Psychol. 2021 Aug 05;12:705212. doi: 10.3389/fpsyg.2021.705212. eCollection 2021.

BACKGROUND AND HYPOTHESIS: Physical activity (PA) is an important behavioral factor associated with the quality of life and healthy longevity. We hypothesize that extremely low and extremely high levels of daily PA (including occupational PA) may have a negative...

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Dubinina E, Korostovtseva LS, Rotar O, et al. Physical Activity Is Associated With Sleep Quality: Results of the ESSE-RF Epidemiological Study. Front Psychol. 2021;12:705212doi: 10.3389/fpsyg.2021.705212.
Dubinina, E., Korostovtseva, L. S., Rotar, O., Amelina, V., Boyarinova, M., Bochkarev, M., Shashkova, T., Baranova, E., Libis, R., Duplyakov, D., Sviryaev, Y., Konradi, A., & Shlyakhto, E. (2021). Physical Activity Is Associated With Sleep Quality: Results of the ESSE-RF Epidemiological Study. Frontiers in psychology, 12705212. https://doi.org/10.3389/fpsyg.2021.705212
Dubinina, Elena, et al. "Physical Activity Is Associated With Sleep Quality: Results of the ESSE-RF Epidemiological Study." Frontiers in psychology vol. 12 (2021): 705212. doi: https://doi.org/10.3389/fpsyg.2021.705212
Dubinina E, Korostovtseva LS, Rotar O, Amelina V, Boyarinova M, Bochkarev M, Shashkova T, Baranova E, Libis R, Duplyakov D, Sviryaev Y, Konradi A, Shlyakhto E. Physical Activity Is Associated With Sleep Quality: Results of the ESSE-RF Epidemiological Study. Front Psychol. 2021 Aug 05;12:705212. doi: 10.3389/fpsyg.2021.705212. eCollection 2021. PMID: 34447339; PMCID: PMC8383779.
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Communities of ground beetles (Carabidae, Coleoptera) in broad-leaved forests of protected and urban areas of the Kaluga Oblast (European Russia).

Biodiversity data journal

Shashkov M, Alexeev S, Ivanova N.
PMID: 33281475
Biodivers Data J. 2020 Nov 26;8:e58688. doi: 10.3897/BDJ.8.e58688. eCollection 2020.

BACKGROUND: This sampling-event dataset provides primary data about species diversity, population and seasonal activity of ground beetles (Carabidae, Coleoptera). The study was carried out in broad-leaved forests of protected ("Kaluzhskiye Zaseki" Nature Reserve and Ugra National Park) and urban...

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Shashkov M, Alexeev S, Ivanova N. Communities of ground beetles (Carabidae, Coleoptera) in broad-leaved forests of protected and urban areas of the Kaluga Oblast (European Russia). Biodivers Data J. 2020;8:e58688doi: 10.3897/BDJ.8.e58688.
Shashkov, M., Alexeev, S., & Ivanova, N. (2020). Communities of ground beetles (Carabidae, Coleoptera) in broad-leaved forests of protected and urban areas of the Kaluga Oblast (European Russia). Biodiversity data journal, 8e58688. https://doi.org/10.3897/BDJ.8.e58688
Shashkov, Maxim, et al. "Communities of ground beetles (Carabidae, Coleoptera) in broad-leaved forests of protected and urban areas of the Kaluga Oblast (European Russia)." Biodiversity data journal vol. 8 (2020): e58688. doi: https://doi.org/10.3897/BDJ.8.e58688
Shashkov M, Alexeev S, Ivanova N. Communities of ground beetles (Carabidae, Coleoptera) in broad-leaved forests of protected and urban areas of the Kaluga Oblast (European Russia). Biodivers Data J. 2020 Nov 26;8:e58688. doi: 10.3897/BDJ.8.e58688. eCollection 2020. PMID: 33281475; PMCID: PMC7714771.
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Showing 61 to 71 of 71 entries