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The eXtraordinarY Kids Clinic: an interdisciplinary model of care for children and adolescents with sex chromosome aneuploidy.

Journal of multidisciplinary healthcare

Tartaglia N, Howell S, Wilson R, Janusz J, Boada R, Martin S, Frazier JB, Pfeiffer M, Regan K, McSwegin S, Zeitler P.
PMID: 26229481
J Multidiscip Healthc. 2015 Jul 17;8:323-34. doi: 10.2147/JMDH.S80242. eCollection 2015.

PURPOSE: Individuals with sex chromosome aneuploidies (SCAs) are born with an atypical number of X and/or Y chromosomes, and present with a range of medical, developmental, educational, behavioral, and psychological concerns. Rates of SCA diagnoses in infants and children...

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Tartaglia N, Howell S, Wilson R, et al. The eXtraordinarY Kids Clinic: an interdisciplinary model of care for children and adolescents with sex chromosome aneuploidy. J Multidiscip Healthc. 2015;8:323-34doi: 10.2147/JMDH.S80242.
Tartaglia, N., Howell, S., Wilson, R., Janusz, J., Boada, R., Martin, S., Frazier, J. B., Pfeiffer, M., Regan, K., McSwegin, S., & Zeitler, P. (2015). The eXtraordinarY Kids Clinic: an interdisciplinary model of care for children and adolescents with sex chromosome aneuploidy. Journal of multidisciplinary healthcare, 8323-34. https://doi.org/10.2147/JMDH.S80242
Tartaglia, Nicole, et al. "The eXtraordinarY Kids Clinic: an interdisciplinary model of care for children and adolescents with sex chromosome aneuploidy." Journal of multidisciplinary healthcare vol. 8 (2015): 323-34. doi: https://doi.org/10.2147/JMDH.S80242
Tartaglia N, Howell S, Wilson R, Janusz J, Boada R, Martin S, Frazier JB, Pfeiffer M, Regan K, McSwegin S, Zeitler P. The eXtraordinarY Kids Clinic: an interdisciplinary model of care for children and adolescents with sex chromosome aneuploidy. J Multidiscip Healthc. 2015 Jul 17;8:323-34. doi: 10.2147/JMDH.S80242. eCollection 2015. PMID: 26229481; PMCID: PMC4514383.
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Association between cell-bound blood amyloid-β(1-40) levels and hippocampus volume.

Alzheimer's research & therapy

Sotolongo-Grau O, Pesini P, Valero S, Lafuente A, Buendía M, Pérez-Grijalba V, José IS, Ibarria M, Tejero MA, Giménez J, Hernández I, Tárraga L, Ruiz A, Boada M, Sarasa M.
PMID: 25484928
Alzheimers Res Ther. 2014 Oct 20;6(5):56. doi: 10.1186/s13195-014-0056-3. eCollection 2014.

INTRODUCTION: The identification of early, preferably presymptomatic, biomarkers and true etiologic factors for Alzheimer's disease (AD) is the first step toward establishing effective primary and secondary prevention programs. Consequently, the search for a relatively inexpensive and harmless biomarker for...

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Sotolongo-Grau O, Pesini P, Valero S, et al. Association between cell-bound blood amyloid-β(1-40) levels and hippocampus volume. Alzheimers Res Ther. 2014;6(5):56doi: 10.1186/s13195-014-0056-3.
Sotolongo-Grau, O., Pesini, P., Valero, S., Lafuente, A., Buendía, M., Pérez-Grijalba, V., José, I. S., Ibarria, M., Tejero, M. A., Giménez, J., Hernández, I., Tárraga, L., Ruiz, A., Boada, M., & Sarasa, M. (2014). Association between cell-bound blood amyloid-β(1-40) levels and hippocampus volume. Alzheimer's research & therapy, 6(5), 56. https://doi.org/10.1186/s13195-014-0056-3
Sotolongo-Grau, Oscar, et al. "Association between cell-bound blood amyloid-β(1-40) levels and hippocampus volume." Alzheimer's research & therapy vol. 6,5 (2014): 56. doi: https://doi.org/10.1186/s13195-014-0056-3
Sotolongo-Grau O, Pesini P, Valero S, Lafuente A, Buendía M, Pérez-Grijalba V, José IS, Ibarria M, Tejero MA, Giménez J, Hernández I, Tárraga L, Ruiz A, Boada M, Sarasa M. Association between cell-bound blood amyloid-β(1-40) levels and hippocampus volume. Alzheimers Res Ther. 2014 Oct 20;6(5):56. doi: 10.1186/s13195-014-0056-3. eCollection 2014. PMID: 25484928; PMCID: PMC4255526.
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Aligned 1-D nanorods of a π-gelator exhibit molecular orientation and excitation energy transport different from entangled fiber networks.

Journal of the American Chemical Society

Sakakibara K, Chithra P, Das B, Mori T, Akada M, Labuta J, Tsuruoka T, Maji S, Furumi S, Shrestha LK, Hill JP, Acharya S, Ariga K, Ajayaghosh A.
PMID: 24873554
J Am Chem Soc. 2014 Jun 18;136(24):8548-51. doi: 10.1021/ja504014k. Epub 2014 Jun 03.

Linear π-gelators self-assemble into entangled fibers in which the molecules are arranged perpendicular to the fiber long axis. However, orientation of gelator molecules in a direction parallel to the long axes of the one-dimensional (1-D) structures remains challenging. Herein...

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Sakakibara K, Chithra P, Das B, et al. Aligned 1-D nanorods of a π-gelator exhibit molecular orientation and excitation energy transport different from entangled fiber networks. J Am Chem Soc. 2014;136(24):8548-51doi: 10.1021/ja504014k.
Sakakibara, K., Chithra, P., Das, B., Mori, T., Akada, M., Labuta, J., Tsuruoka, T., Maji, S., Furumi, S., Shrestha, L. K., Hill, J. P., Acharya, S., Ariga, K., & Ajayaghosh, A. (2014). Aligned 1-D nanorods of a π-gelator exhibit molecular orientation and excitation energy transport different from entangled fiber networks. Journal of the American Chemical Society, 136(24), 8548-51. https://doi.org/10.1021/ja504014k
Sakakibara, Keita, et al. "Aligned 1-D nanorods of a π-gelator exhibit molecular orientation and excitation energy transport different from entangled fiber networks." Journal of the American Chemical Society vol. 136,24 (2014): 8548-51. doi: https://doi.org/10.1021/ja504014k
Sakakibara K, Chithra P, Das B, Mori T, Akada M, Labuta J, Tsuruoka T, Maji S, Furumi S, Shrestha LK, Hill JP, Acharya S, Ariga K, Ajayaghosh A. Aligned 1-D nanorods of a π-gelator exhibit molecular orientation and excitation energy transport different from entangled fiber networks. J Am Chem Soc. 2014 Jun 18;136(24):8548-51. doi: 10.1021/ja504014k. Epub 2014 Jun 03. PMID: 24873554.
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PET motion correction using MR-derived motion parameters.

EJNMMI physics

Bickell M, Koesters T, Boada F, Nuyts J.
PMID: 26501642
EJNMMI Phys. 2014 Jul;1:A53. doi: 10.1186/2197-7364-1-S1-A53.

No abstract available.

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Bickell M, Koesters T, Boada F, et al. PET motion correction using MR-derived motion parameters. EJNMMI Phys. 2014;1:A53doi: 10.1186/2197-7364-1-S1-A53.
Bickell, M., Koesters, T., Boada, F., & Nuyts, J. (2014). PET motion correction using MR-derived motion parameters. EJNMMI physics, 1A53. https://doi.org/10.1186/2197-7364-1-S1-A53
Bickell, Matthew, et al. "PET motion correction using MR-derived motion parameters." EJNMMI physics vol. 1 (2014): A53. doi: https://doi.org/10.1186/2197-7364-1-S1-A53
Bickell M, Koesters T, Boada F, Nuyts J. PET motion correction using MR-derived motion parameters. EJNMMI Phys. 2014 Jul;1:A53. doi: 10.1186/2197-7364-1-S1-A53. PMID: 26501642; PMCID: PMC4546068.
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Representing annotation compositionality and provenance for the Semantic Web.

Journal of biomedical semantics

Livingston KM, Bada M, Hunter LE, Verspoor K.
PMID: 24268021
J Biomed Semantics. 2013 Nov 22;4:38. doi: 10.1186/2041-1480-4-38. eCollection 2013.

BACKGROUND: Though the annotation of digital artifacts with metadata has a long history, the bulk of that work focuses on the association of single terms or concepts to single targets. As annotation efforts expand to capture more complex information,...

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Livingston KM, Bada M, Hunter LE, et al. Representing annotation compositionality and provenance for the Semantic Web. J Biomed Semantics. 2013;4:38doi: 10.1186/2041-1480-4-38.
Livingston, K. M., Bada, M., Hunter, L. E., & Verspoor, K. (2013). Representing annotation compositionality and provenance for the Semantic Web. Journal of biomedical semantics, 438. https://doi.org/10.1186/2041-1480-4-38
Livingston, Kevin M, et al. "Representing annotation compositionality and provenance for the Semantic Web." Journal of biomedical semantics vol. 4 (2013): 38. doi: https://doi.org/10.1186/2041-1480-4-38
Livingston KM, Bada M, Hunter LE, Verspoor K. Representing annotation compositionality and provenance for the Semantic Web. J Biomed Semantics. 2013 Nov 22;4:38. doi: 10.1186/2041-1480-4-38. eCollection 2013. PMID: 24268021; PMCID: PMC4129183.
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Synthesis and Crystal Structure of Diaqua(1,10-Phenanthroline-N,N')(Thiosulfato-O,S)Manganese(II). Biological Properties.

Metal-based drugs

Brezeanu M, Badea M, Morgant G, Viossat B, Bouttier S, Fourniat J, Marinescu D, Huy DN.
PMID: 18475862
Met Based Drugs. 1998;5(5):305-12. doi: 10.1155/MBD.1998.305.

The synthesis of diaqua(1,10-phenanthroline-N,N')(thiosulfato-O,S)manganese(ll) [Mn(phen)(S(2)O(3))(H(2)O)(2)] was investigated. Its structure was determined by single crystal X-ray diffraction from 2418 reflections (I > 3 sigma(I)) to a final value of R = 0.047 and Rw = 0.054. Crystal data are as...

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Brezeanu M, Badea M, Morgant G, et al. Synthesis and Crystal Structure of Diaqua(1,10-Phenanthroline-N,N')(Thiosulfato-O,S)Manganese(II). Biological Properties. Met Based Drugs. 1998;5(5):305-12doi: 10.1155/MBD.1998.305.
Brezeanu, M., Badea, M., Morgant, G., Viossat, B., Bouttier, S., Fourniat, J., Marinescu, D., & Huy, D. N. (1998). Synthesis and Crystal Structure of Diaqua(1,10-Phenanthroline-N,N')(Thiosulfato-O,S)Manganese(II). Biological Properties. Metal-based drugs, 5(5), 305-12. https://doi.org/10.1155/MBD.1998.305
Brezeanu, M, et al. "Synthesis and Crystal Structure of Diaqua(1,10-Phenanthroline-N,N')(Thiosulfato-O,S)Manganese(II). Biological Properties." Metal-based drugs vol. 5,5 (1998): 305-12. doi: https://doi.org/10.1155/MBD.1998.305
Brezeanu M, Badea M, Morgant G, Viossat B, Bouttier S, Fourniat J, Marinescu D, Huy DN. Synthesis and Crystal Structure of Diaqua(1,10-Phenanthroline-N,N')(Thiosulfato-O,S)Manganese(II). Biological Properties. Met Based Drugs. 1998;5(5):305-12. doi: 10.1155/MBD.1998.305. PMID: 18475862; PMCID: PMC2365141.
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Conformation of solvent N,N-dimethylpropionamide in the coordination sphere of the zinc(II) ion studied by Raman spectroscopy and DFT calculations.

The journal of physical chemistry. A

Umebayashi Y, Mroz B, Asada M, Fujii K, Matsumoto K, Mune Y, Probst M, Ishiguro S.
PMID: 16833831
J Phys Chem A. 2005 Jun 02;109(21):4862-8. doi: 10.1021/jp044763a.

Solvation structure of the zinc(II) ion in N,N-dimethylpropionamide (DMPA) was studied by Raman spectroscopy at varying temperature and by quantum mechanical calculations. No significant ion-pair formation was found for the Zn(ClO4)2 solution in the molality range m(Zn) < 1.5...

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Umebayashi Y, Mroz B, Asada M, et al. Conformation of solvent N,N-dimethylpropionamide in the coordination sphere of the zinc(II) ion studied by Raman spectroscopy and DFT calculations. J Phys Chem A. 2005;109(21):4862-8doi: 10.1021/jp044763a.
Umebayashi, Y., Mroz, B., Asada, M., Fujii, K., Matsumoto, K., Mune, Y., Probst, M., & Ishiguro, S. (2005). Conformation of solvent N,N-dimethylpropionamide in the coordination sphere of the zinc(II) ion studied by Raman spectroscopy and DFT calculations. The journal of physical chemistry. A, 109(21), 4862-8. https://doi.org/10.1021/jp044763a
Umebayashi, Yasuhiro, et al. "Conformation of solvent N,N-dimethylpropionamide in the coordination sphere of the zinc(II) ion studied by Raman spectroscopy and DFT calculations." The journal of physical chemistry. A vol. 109,21 (2005): 4862-8. doi: https://doi.org/10.1021/jp044763a
Umebayashi Y, Mroz B, Asada M, Fujii K, Matsumoto K, Mune Y, Probst M, Ishiguro S. Conformation of solvent N,N-dimethylpropionamide in the coordination sphere of the zinc(II) ion studied by Raman spectroscopy and DFT calculations. J Phys Chem A. 2005 Jun 02;109(21):4862-8. doi: 10.1021/jp044763a. PMID: 16833831.
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Evidence of conformational equilibrium of 1-ethyl-3-methylimidazolium in its ionic liquid salts: Raman spectroscopic study and quantum chemical calculations.

The journal of physical chemistry. A

Umebayashi Y, Fujimori T, Sukizaki T, Asada M, Fujii K, Kanzaki R, Ishiguro S.
PMID: 16332000
J Phys Chem A. 2005 Oct 13;109(40):8976-82. doi: 10.1021/jp053476j.

Raman spectra of liquid 1-ethyl-3-methylimidazolium (EMI+) salts, EMI(+)BF4-, EMI(+)PF6-, EMI(+)CF3SO3-, and EMI(+)N(CF3SO2)2-, were measured over the frequency range 200-1600 cm(-1). In the range 200-500 cm(-1), we found five bands originating from the EMI+ ion at 241, 297, 387, 430,...

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Umebayashi Y, Fujimori T, Sukizaki T, et al. Evidence of conformational equilibrium of 1-ethyl-3-methylimidazolium in its ionic liquid salts: Raman spectroscopic study and quantum chemical calculations. J Phys Chem A. 2005;109(40):8976-82doi: 10.1021/jp053476j.
Umebayashi, Y., Fujimori, T., Sukizaki, T., Asada, M., Fujii, K., Kanzaki, R., & Ishiguro, S. (2005). Evidence of conformational equilibrium of 1-ethyl-3-methylimidazolium in its ionic liquid salts: Raman spectroscopic study and quantum chemical calculations. The journal of physical chemistry. A, 109(40), 8976-82. https://doi.org/10.1021/jp053476j
Umebayashi, Yasuhiro, et al. "Evidence of conformational equilibrium of 1-ethyl-3-methylimidazolium in its ionic liquid salts: Raman spectroscopic study and quantum chemical calculations." The journal of physical chemistry. A vol. 109,40 (2005): 8976-82. doi: https://doi.org/10.1021/jp053476j
Umebayashi Y, Fujimori T, Sukizaki T, Asada M, Fujii K, Kanzaki R, Ishiguro S. Evidence of conformational equilibrium of 1-ethyl-3-methylimidazolium in its ionic liquid salts: Raman spectroscopic study and quantum chemical calculations. J Phys Chem A. 2005 Oct 13;109(40):8976-82. doi: 10.1021/jp053476j. PMID: 16332000.
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Impaired urge-to-cough in elderly patients with aspiration pneumonia.

Cough (London, England)

Yamanda S, Ebihara S, Ebihara T, Yamasaki M, Asamura T, Asada M, Une K, Arai H.
PMID: 19019213
Cough. 2008 Nov 19;4:11. doi: 10.1186/1745-9974-4-11.

BACKGROUND: The down-regulation of the cough reflex in patients with aspiration pneumonia can involve both cortical facilitatory pathways for cough and medullary reflex pathways. In order to study the possible involvement of the supramedullary system in the down-regulation of...

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Yamanda S, Ebihara S, Ebihara T, et al. Impaired urge-to-cough in elderly patients with aspiration pneumonia. Cough. 2008;4:11doi: 10.1186/1745-9974-4-11.
Yamanda, S., Ebihara, S., Ebihara, T., Yamasaki, M., Asamura, T., Asada, M., Une, K., & Arai, H. (2008). Impaired urge-to-cough in elderly patients with aspiration pneumonia. Cough (London, England), 411. https://doi.org/10.1186/1745-9974-4-11
Yamanda, Shinsuke, et al. "Impaired urge-to-cough in elderly patients with aspiration pneumonia." Cough (London, England) vol. 4 (2008): 11. doi: https://doi.org/10.1186/1745-9974-4-11
Yamanda S, Ebihara S, Ebihara T, Yamasaki M, Asamura T, Asada M, Une K, Arai H. Impaired urge-to-cough in elderly patients with aspiration pneumonia. Cough. 2008 Nov 19;4:11. doi: 10.1186/1745-9974-4-11. PMID: 19019213; PMCID: PMC2600632.
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Diverse self-assembly in soluble oligoazaacenes: a microscopy study.

Langmuir : the ACS journal of surfaces and colloids

Richards GJ, Hill JP, Okamoto K, Shundo A, Akada M, Elsegood MR, Mori T, Ariga K.
PMID: 19281267
Langmuir. 2009 Aug 04;25(15):8408-13. doi: 10.1021/la8041633.

The synthesis and morphologies of self-assembled aggregates of novel oligoazapentacene 2 and oligoazaheptacene 3 derivatives are reported. Double nucleophilic substitution on 2,3-dicyano-[h,j]-dibenzo-1,4,5,10-tetrazaanthracene 4 gives the corresponding dihydro-oligoacene derivatives, which were then N-alkylated using n-dodecyl bromide to yield self-assembling acene...

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Richards GJ, Hill JP, Okamoto K, et al. Diverse self-assembly in soluble oligoazaacenes: a microscopy study. Langmuir. 2009;25(15):8408-13doi: 10.1021/la8041633.
Richards, G. J., Hill, J. P., Okamoto, K., Shundo, A., Akada, M., Elsegood, M. R., Mori, T., & Ariga, K. (2009). Diverse self-assembly in soluble oligoazaacenes: a microscopy study. Langmuir : the ACS journal of surfaces and colloids, 25(15), 8408-13. https://doi.org/10.1021/la8041633
Richards, Gary J, et al. "Diverse self-assembly in soluble oligoazaacenes: a microscopy study." Langmuir : the ACS journal of surfaces and colloids vol. 25,15 (2009): 8408-13. doi: https://doi.org/10.1021/la8041633
Richards GJ, Hill JP, Okamoto K, Shundo A, Akada M, Elsegood MR, Mori T, Ariga K. Diverse self-assembly in soluble oligoazaacenes: a microscopy study. Langmuir. 2009 Aug 04;25(15):8408-13. doi: 10.1021/la8041633. PMID: 19281267.
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Initialization and self-organized optimization of recurrent neural network connectivity.

HFSP journal

Boedecker J, Obst O, Mayer NM, Asada M.
PMID: 20357891
HFSP J. 2009 Oct;3(5):340-9. doi: 10.2976/1.3240502. Epub 2009 Oct 26.

Reservoir computing (RC) is a recent paradigm in the field of recurrent neural networks. Networks in RC have a sparsely and randomly connected fixed hidden layer, and only output connections are trained. RC networks have recently received increased attention...

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Boedecker J, Obst O, Mayer NM, et al. Initialization and self-organized optimization of recurrent neural network connectivity. HFSP J. 2009;3(5):340-9doi: 10.2976/1.3240502.
Boedecker, J., Obst, O., Mayer, N. M., & Asada, M. (2009). Initialization and self-organized optimization of recurrent neural network connectivity. HFSP journal, 3(5), 340-9. https://doi.org/10.2976/1.3240502
Boedecker, Joschka, et al. "Initialization and self-organized optimization of recurrent neural network connectivity." HFSP journal vol. 3,5 (2009): 340-9. doi: https://doi.org/10.2976/1.3240502
Boedecker J, Obst O, Mayer NM, Asada M. Initialization and self-organized optimization of recurrent neural network connectivity. HFSP J. 2009 Oct;3(5):340-9. doi: 10.2976/1.3240502. Epub 2009 Oct 26. PMID: 20357891; PMCID: PMC2801534.
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The membrane-spanning 4-domains, subfamily A (MS4A) gene cluster contains a common variant associated with Alzheimer's disease.

Genome medicine

Antúnez C, Boada M, González-Pérez A, Gayán J, Ramírez-Lorca R, Marín J, Hernández I, Moreno-Rey C, Morón FJ, López-Arrieta J, Mauleón A, Rosende-Roca M, Noguera-Perea F, Legaz-García A, Vivancos-Moreau L, Velasco J, Carrasco JM, Alegret M, Antequera-Torres M, Manzanares S, Romo A, Blanca I, Ruiz S, Espinosa A, Castaño S, García B, Martínez-Herrada B, Vinyes G, Lafuente A, Becker JT, Galán JJ, Serrano-Ríos M, Vázquez E, Tárraga L, Sáez ME, López OL, Real LM, Ruiz A.
PMID: 21627779
Genome Med. 2011 May 31;3(5):33. doi: 10.1186/gm249.

BACKGROUND: In order to identify novel loci associated with Alzheimer's disease (AD), we conducted a genome-wide association study (GWAS) in the Spanish population.METHODS: We genotyped 1,128 individuals using the Affymetrix Nsp I 250K chip. A sample of 327 sporadic...

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Antúnez C, Boada M, González-Pérez A, et al. The membrane-spanning 4-domains, subfamily A (MS4A) gene cluster contains a common variant associated with Alzheimer's disease. Genome Med. 2011;3(5):33doi: 10.1186/gm249.
Antúnez, C., Boada, M., González-Pérez, A., Gayán, J., Ramírez-Lorca, R., Marín, J., Hernández, I., Moreno-Rey, C., Morón, F. J., López-Arrieta, J., Mauleón, A., Rosende-Roca, M., Noguera-Perea, F., Legaz-García, A., Vivancos-Moreau, L., Velasco, J., Carrasco, J. M., Alegret, M., Antequera-Torres, M., Manzanares, S., Romo, A., Blanca, I., Ruiz, S., Espinosa, A., Castaño, S., García, B., Martínez-Herrada, B., Vinyes, G., Lafuente, A., Becker, J. T., Galán, J. J., Serrano-Ríos, M., Vázquez, E., Tárraga, L., Sáez, M. E., López, O. L., Real, L. M., & Ruiz, A. (2011). The membrane-spanning 4-domains, subfamily A (MS4A) gene cluster contains a common variant associated with Alzheimer's disease. Genome medicine, 3(5), 33. https://doi.org/10.1186/gm249
Antúnez, Carmen, et al. "The membrane-spanning 4-domains, subfamily A (MS4A) gene cluster contains a common variant associated with Alzheimer's disease." Genome medicine vol. 3,5 (2011): 33. doi: https://doi.org/10.1186/gm249
Antúnez C, Boada M, González-Pérez A, Gayán J, Ramírez-Lorca R, Marín J, Hernández I, Moreno-Rey C, Morón FJ, López-Arrieta J, Mauleón A, Rosende-Roca M, Noguera-Perea F, Legaz-García A, Vivancos-Moreau L, Velasco J, Carrasco JM, Alegret M, Antequera-Torres M, Manzanares S, Romo A, Blanca I, Ruiz S, Espinosa A, Castaño S, García B, Martínez-Herrada B, Vinyes G, Lafuente A, Becker JT, Galán JJ, Serrano-Ríos M, Vázquez E, Tárraga L, Sáez ME, López OL, Real LM, Ruiz A. The membrane-spanning 4-domains, subfamily A (MS4A) gene cluster contains a common variant associated with Alzheimer's disease. Genome Med. 2011 May 31;3(5):33. doi: 10.1186/gm249. PMID: 21627779; PMCID: PMC3219074.
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