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Beyond the Ribosome: Extra-translational Functions of tRNA Fragments.

Biomarker insights

Diebel KW, Zhou K, Clarke AB, Bemis LT.
PMID: 26843810
Biomark Insights. 2016 Jan 28;11:1-8. doi: 10.4137/BMI.S35904. eCollection 2016.

High-throughput sequencing studies of small RNAs reveal a complex milieu of noncoding RNAs in biological samples. Early data analysis was often limited to microRNAs due to their regulatory nature and potential as biomarkers; however, many more classes of noncoding...

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Diebel KW, Zhou K, Clarke AB, et al. Beyond the Ribosome: Extra-translational Functions of tRNA Fragments. Biomark Insights. 2016;11:1-8doi: 10.4137/BMI.S35904.
Diebel, K. W., Zhou, K., Clarke, A. B., & Bemis, L. T. (2016). Beyond the Ribosome: Extra-translational Functions of tRNA Fragments. Biomarker insights, 111-8. https://doi.org/10.4137/BMI.S35904
Diebel, Kevin W, et al. "Beyond the Ribosome: Extra-translational Functions of tRNA Fragments." Biomarker insights vol. 11 (2016): 1-8. doi: https://doi.org/10.4137/BMI.S35904
Diebel KW, Zhou K, Clarke AB, Bemis LT. Beyond the Ribosome: Extra-translational Functions of tRNA Fragments. Biomark Insights. 2016 Jan 28;11:1-8. doi: 10.4137/BMI.S35904. eCollection 2016. PMID: 26843810; PMCID: PMC4734663.
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A radio counterpart to a neutron star merger.

Science (New York, N.Y.)

Hallinan G, Corsi A, Mooley KP, Hotokezaka K, Nakar E, Kasliwal MM, Kaplan DL, Frail DA, Myers ST, Murphy T, De K, Dobie D, Allison JR, Bannister KW, Bhalerao V, Chandra P, Clarke TE, Giacintucci S, Ho AYQ, Horesh A, Kassim NE, Kulkarni SR, Lenc E, Lockman FJ, Lynch C, Nichols D, Nissanke S, Palliyaguru N, Peters WM, Piran T, Rana J, Sadler EM, Singer LP.
PMID: 29038372
Science. 2017 Dec 22;358(6370):1579-1583. doi: 10.1126/science.aap9855. Epub 2017 Oct 16.

Gravitational waves have been detected from a binary neutron star merger event, GW170817. The detection of electromagnetic radiation from the same source has shown that the merger occurred in the outskirts of the galaxy NGC 4993, at a distance...

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Hallinan G, Corsi A, Mooley KP, et al. A radio counterpart to a neutron star merger. Science. 2017;358(6370):1579-1583doi: 10.1126/science.aap9855.
Hallinan, G., Corsi, A., Mooley, K. P., Hotokezaka, K., Nakar, E., Kasliwal, M. M., Kaplan, D. L., Frail, D. A., Myers, S. T., Murphy, T., De, K., Dobie, D., Allison, J. R., Bannister, K. W., Bhalerao, V., Chandra, P., Clarke, T. E., Giacintucci, S., Ho, A. Y. Q., Horesh, A., Kassim, N. E., Kulkarni, S. R., Lenc, E., Lockman, F. J., Lynch, C., Nichols, D., Nissanke, S., Palliyaguru, N., Peters, W. M., Piran, T., Rana, J., Sadler, E. M., & Singer, L. P. (2017). A radio counterpart to a neutron star merger. Science (New York, N.Y.), 358(6370), 1579-1583. https://doi.org/10.1126/science.aap9855
Hallinan, G, et al. "A radio counterpart to a neutron star merger." Science (New York, N.Y.) vol. 358,6370 (2017): 1579-1583. doi: https://doi.org/10.1126/science.aap9855
Hallinan G, Corsi A, Mooley KP, Hotokezaka K, Nakar E, Kasliwal MM, Kaplan DL, Frail DA, Myers ST, Murphy T, De K, Dobie D, Allison JR, Bannister KW, Bhalerao V, Chandra P, Clarke TE, Giacintucci S, Ho AYQ, Horesh A, Kassim NE, Kulkarni SR, Lenc E, Lockman FJ, Lynch C, Nichols D, Nissanke S, Palliyaguru N, Peters WM, Piran T, Rana J, Sadler EM, Singer LP. A radio counterpart to a neutron star merger. Science. 2017 Dec 22;358(6370):1579-1583. doi: 10.1126/science.aap9855. Epub 2017 Oct 16. PMID: 29038372.
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Somatic mutations in salivary duct carcinoma and potential therapeutic targets.

Oncotarget

Khoo TK, Yu B, Smith JA, Clarke AJ, Luk PP, Selinger CI, Mahon KL, Kraitsek S, Palme C, Boyer MJ, Dinger ME, Cowley MJ, O'Toole SA, Clark JR, Gupta R.
PMID: 29100278
Oncotarget. 2017 May 25;8(44):75893-75903. doi: 10.18632/oncotarget.18173. eCollection 2017 Sep 29.

BACKGROUND: Salivary duct carcinomas (SDCa) are rare highly aggressive malignancies. Most patients die from distant metastatic disease within three years of diagnosis. There are limited therapeutic options for disseminated disease.RESULTS: 11 cases showed androgen receptor expression and 6 cases...

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Khoo TK, Yu B, Smith JA, et al. Somatic mutations in salivary duct carcinoma and potential therapeutic targets. Oncotarget. 2017;8(44):75893-75903doi: 10.18632/oncotarget.18173.
Khoo, T. K., Yu, B., Smith, J. A., Clarke, A. J., Luk, P. P., Selinger, C. I., Mahon, K. L., Kraitsek, S., Palme, C., Boyer, M. J., Dinger, M. E., Cowley, M. J., O'Toole, S. A., Clark, J. R., & Gupta, R. (2017). Somatic mutations in salivary duct carcinoma and potential therapeutic targets. Oncotarget, 8(44), 75893-75903. https://doi.org/10.18632/oncotarget.18173
Khoo, Timothy K, et al. "Somatic mutations in salivary duct carcinoma and potential therapeutic targets." Oncotarget vol. 8,44 (2017): 75893-75903. doi: https://doi.org/10.18632/oncotarget.18173
Khoo TK, Yu B, Smith JA, Clarke AJ, Luk PP, Selinger CI, Mahon KL, Kraitsek S, Palme C, Boyer MJ, Dinger ME, Cowley MJ, O'Toole SA, Clark JR, Gupta R. Somatic mutations in salivary duct carcinoma and potential therapeutic targets. Oncotarget. 2017 May 25;8(44):75893-75903. doi: 10.18632/oncotarget.18173. eCollection 2017 Sep 29. PMID: 29100278; PMCID: PMC5652672.
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Genome Sequence of .

Genome announcements

Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK.
PMID: 28572309
Genome Announc. 2017 Jun 01;5(22). doi: 10.1128/genomeA.00394-17.

We present the genome of

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Töpel M, Pinder MIM, Johansson ON, et al. Genome Sequence of . Genome Announc. 2017;5(22)doi: 10.1128/genomeA.00394-17.
Töpel, M., Pinder, M. I. M., Johansson, O. N., Kourtchenko, O., Godhe, A., & Clarke, A. K. (2017). Genome Sequence of . Genome announcements, 5(22), . https://doi.org/10.1128/genomeA.00394-17
Töpel, Mats, et al. "Genome Sequence of ." Genome announcements vol. 5,22 (2017). doi: https://doi.org/10.1128/genomeA.00394-17
Töpel M, Pinder MIM, Johansson ON, Kourtchenko O, Godhe A, Clarke AK. Genome Sequence of . Genome Announc. 2017 Jun 01;5(22). doi: 10.1128/genomeA.00394-17. PMID: 28572309; PMCID: PMC5454192.
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Diagnostic yield from colon biopsies in patients with inflammatory bowel disease and suspected cytomegalovirus infection: is it worth it?.

Annals of gastroenterology

Umar S, Clarke K, Bilimoria F, Bilal M, Singh S, Silverman J.
PMID: 28655979
Ann Gastroenterol. 2017;30(4):429-432. doi: 10.20524/aog.2017.0153. Epub 2017 May 05.

BACKGROUND: Patients with inflammatory bowel disease (IBD) are often immunosuppressed and are at risk for reactivation of latent cytomegalovirus (CMV) infection. We examined the diagnostic yield from colon biopsies in IBD patients with suspected CMV infection.METHODS: Patients above 18...

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Umar S, Clarke K, Bilimoria F, et al. Diagnostic yield from colon biopsies in patients with inflammatory bowel disease and suspected cytomegalovirus infection: is it worth it?. Ann Gastroenterol. 2017;30(4):429-432doi: 10.20524/aog.2017.0153.
Umar, S., Clarke, K., Bilimoria, F., Bilal, M., Singh, S., & Silverman, J. (2017). Diagnostic yield from colon biopsies in patients with inflammatory bowel disease and suspected cytomegalovirus infection: is it worth it?. Annals of gastroenterology, 30(4), 429-432. https://doi.org/10.20524/aog.2017.0153
Umar, Shifa, et al. "Diagnostic yield from colon biopsies in patients with inflammatory bowel disease and suspected cytomegalovirus infection: is it worth it?." Annals of gastroenterology vol. 30,4 (2017): 429-432. doi: https://doi.org/10.20524/aog.2017.0153
Umar S, Clarke K, Bilimoria F, Bilal M, Singh S, Silverman J. Diagnostic yield from colon biopsies in patients with inflammatory bowel disease and suspected cytomegalovirus infection: is it worth it?. Ann Gastroenterol. 2017;30(4):429-432. doi: 10.20524/aog.2017.0153. Epub 2017 May 05. PMID: 28655979; PMCID: PMC5479995.
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Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth.

Frontiers in microbiology

Beckwith CR, Edwards MJ, Lawes M, Shi L, Butt JN, Richardson DJ, Clarke TA.
PMID: 25972843
Front Microbiol. 2015 Apr 28;6:332. doi: 10.3389/fmicb.2015.00332. eCollection 2015.

The autotrophic Sideroxydans lithotrophicus ES-1 can grow by coupling the oxidation of ferrous iron to the reduction of oxygen. Soluble ferrous iron is oxidized at the surface of the cell by an MtoAB porin-cytochrome complex that functions as an...

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Beckwith CR, Edwards MJ, Lawes M, et al. Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth. Front Microbiol. 2015;6:332doi: 10.3389/fmicb.2015.00332.
Beckwith, C. R., Edwards, M. J., Lawes, M., Shi, L., Butt, J. N., Richardson, D. J., & Clarke, T. A. (2015). Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth. Frontiers in microbiology, 6332. https://doi.org/10.3389/fmicb.2015.00332
Beckwith, Christopher R, et al. "Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth." Frontiers in microbiology vol. 6 (2015): 332. doi: https://doi.org/10.3389/fmicb.2015.00332
Beckwith CR, Edwards MJ, Lawes M, Shi L, Butt JN, Richardson DJ, Clarke TA. Characterization of MtoD from Sideroxydans lithotrophicus: a cytochrome c electron shuttle used in lithoautotrophic growth. Front Microbiol. 2015 Apr 28;6:332. doi: 10.3389/fmicb.2015.00332. eCollection 2015. PMID: 25972843; PMCID: PMC4412085.
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The use of Bruton's tyrosine kinase inhibition as a bridging strategy to successful allogeneic stem cell transplant in relapsed mantle cell lymphoma.

Leukemia & lymphoma

Furtado M, Clarke K, Medd P, Hunter H, Rule S.
PMID: 25994793
Leuk Lymphoma. 2016 Feb;57(2):461-462. doi: 10.3109/10428194.2015.1050665. Epub 2015 Jun 19.

No abstract available.

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Furtado M, Clarke K, Medd P, et al. The use of Bruton's tyrosine kinase inhibition as a bridging strategy to successful allogeneic stem cell transplant in relapsed mantle cell lymphoma. Leuk Lymphoma. 2015;57(2):461-462doi: 10.3109/10428194.2015.1050665.
Furtado, M., Clarke, K., Medd, P., Hunter, H., & Rule, S. (2016). The use of Bruton's tyrosine kinase inhibition as a bridging strategy to successful allogeneic stem cell transplant in relapsed mantle cell lymphoma. Leukemia & lymphoma, 57(2), 461-462. https://doi.org/10.3109/10428194.2015.1050665
Furtado, Michelle, et al. "The use of Bruton's tyrosine kinase inhibition as a bridging strategy to successful allogeneic stem cell transplant in relapsed mantle cell lymphoma." Leukemia & lymphoma vol. 57,2 (2016): 461-462. doi: https://doi.org/10.3109/10428194.2015.1050665
Furtado M, Clarke K, Medd P, Hunter H, Rule S. The use of Bruton's tyrosine kinase inhibition as a bridging strategy to successful allogeneic stem cell transplant in relapsed mantle cell lymphoma. Leuk Lymphoma. 2016 Feb;57(2):461-462. doi: 10.3109/10428194.2015.1050665. Epub 2015 Jun 19. PMID: 25994793.
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The impact of attentional, linguistic, and visual features during object naming.

Frontiers in psychology

Clarke AD, Coco MI, Keller F.
PMID: 24379792
Front Psychol. 2013 Dec 13;4:927. doi: 10.3389/fpsyg.2013.00927. eCollection 2013.

Object detection and identification are fundamental to human vision, and there is mounting evidence that objects guide the allocation of visual attention. However, the role of objects in tasks involving multiple modalities is less clear. To address this question,...

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Clarke AD, Coco MI, Keller F. The impact of attentional, linguistic, and visual features during object naming. Front Psychol. 2013;4:927doi: 10.3389/fpsyg.2013.00927.
Clarke, A. D., Coco, M. I., & Keller, F. (2013). The impact of attentional, linguistic, and visual features during object naming. Frontiers in psychology, 4927. https://doi.org/10.3389/fpsyg.2013.00927
Clarke, Alasdair D F, et al. "The impact of attentional, linguistic, and visual features during object naming." Frontiers in psychology vol. 4 (2013): 927. doi: https://doi.org/10.3389/fpsyg.2013.00927
Clarke AD, Coco MI, Keller F. The impact of attentional, linguistic, and visual features during object naming. Front Psychol. 2013 Dec 13;4:927. doi: 10.3389/fpsyg.2013.00927. eCollection 2013. PMID: 24379792; PMCID: PMC3861867.
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Bridging the digital disconnect: Exploring the views of professionals on using technology to promote young people's mental health.

School Psychology International

Clarke AM, Chambers D, Barry MM.
PMID: 29081558
Sch Psychol Int. 2017 Aug;38(4):380-397. doi: 10.1177/0143034317700937. Epub 2017 Apr 25.

The increasing role of online technologies in young people's lives has significant implications for professionals' engagement with technologies to promote youth mental health and well-being. However, relatively little is known about professionals' views on the role of technologies in...

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Clarke AM, Chambers D, Barry MM. Bridging the digital disconnect: Exploring the views of professionals on using technology to promote young people's mental health. Sch Psychol Int. 2017;38(4):380-397doi: 10.1177/0143034317700937.
Clarke, A. M., Chambers, D., & Barry, M. M. (2017). Bridging the digital disconnect: Exploring the views of professionals on using technology to promote young people's mental health. School Psychology International, 38(4), 380-397. https://doi.org/10.1177/0143034317700937
Clarke, Aleisha M, et al. "Bridging the digital disconnect: Exploring the views of professionals on using technology to promote young people's mental health." School Psychology International vol. 38,4 (2017): 380-397. doi: https://doi.org/10.1177/0143034317700937
Clarke AM, Chambers D, Barry MM. Bridging the digital disconnect: Exploring the views of professionals on using technology to promote young people's mental health. Sch Psychol Int. 2017 Aug;38(4):380-397. doi: 10.1177/0143034317700937. Epub 2017 Apr 25. PMID: 29081558; PMCID: PMC5646430.
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Home parenteral nutrition use in palliative care: A retrospective study to identify potential prognostic indicators.

Clinical nutrition ESPEN

Drinkwater B, Clarke BK, Ratcliffe J, Jones J, Deel-Smith P, Cooper SC.
PMID: 28531480
Clin Nutr ESPEN. 2015 Oct;10(5):e180-e181. doi: 10.1016/j.clnesp.2015.03.012. Epub 2015 Aug 28.

No abstract available.

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Drinkwater B, Clarke BK, Ratcliffe J, et al. Home parenteral nutrition use in palliative care: A retrospective study to identify potential prognostic indicators. Clin Nutr ESPEN. 2015;10(5):e180-e181doi: 10.1016/j.clnesp.2015.03.012.
Drinkwater, B., Clarke, B. K., Ratcliffe, J., Jones, J., Deel-Smith, P., & Cooper, S. C. (2015). Home parenteral nutrition use in palliative care: A retrospective study to identify potential prognostic indicators. Clinical nutrition ESPEN, 10(5), e180-e181. https://doi.org/10.1016/j.clnesp.2015.03.012
Drinkwater, B, et al. "Home parenteral nutrition use in palliative care: A retrospective study to identify potential prognostic indicators." Clinical nutrition ESPEN vol. 10,5 (2015): e180-e181. doi: https://doi.org/10.1016/j.clnesp.2015.03.012
Drinkwater B, Clarke BK, Ratcliffe J, Jones J, Deel-Smith P, Cooper SC. Home parenteral nutrition use in palliative care: A retrospective study to identify potential prognostic indicators. Clin Nutr ESPEN. 2015 Oct;10(5):e180-e181. doi: 10.1016/j.clnesp.2015.03.012. Epub 2015 Aug 28. PMID: 28531480.
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Emergence of Zika Virus Epidemic and the National Response in Jamaica.

The West Indian medical journal

Webster-Kerr KR, Christie C, Grant A, Chin D, Burrowes H, Clarke K, Wellington I, Shaw K, De La Haye W.
PMID: 28375542
West Indian Med J. 2016 Sep 26;65(1):243-249. doi: 10.7727/wimj.2016.488.

BACKGROUND: Jamaica, along with the Americas, experienced major epidemics of arboviral diseases transmitted by the Aedes aegypti mosquito in recent years. These include dengue fever in 2012, Chikungunya fever in 2014 and Zika virus infection (ZIKV) in 2016. We...

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Webster-Kerr KR, Christie C, Grant A, et al. Emergence of Zika Virus Epidemic and the National Response in Jamaica. West Indian Med J. 2016;65(1):243-249doi: 10.7727/wimj.2016.488.
Webster-Kerr, K. R., Christie, C., Grant, A., Chin, D., Burrowes, H., Clarke, K., Wellington, I., Shaw, K., & De La Haye, W. (2016). Emergence of Zika Virus Epidemic and the National Response in Jamaica. The West Indian medical journal, 65(1), 243-249. https://doi.org/10.7727/wimj.2016.488
Webster-Kerr, K R, et al. "Emergence of Zika Virus Epidemic and the National Response in Jamaica." The West Indian medical journal vol. 65,1 (2016): 243-249. doi: https://doi.org/10.7727/wimj.2016.488
Webster-Kerr KR, Christie C, Grant A, Chin D, Burrowes H, Clarke K, Wellington I, Shaw K, De La Haye W. Emergence of Zika Virus Epidemic and the National Response in Jamaica. West Indian Med J. 2016 Sep 26;65(1):243-249. doi: 10.7727/wimj.2016.488. PMID: 28375542.
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Peer-assisted learning in medical school: tutees' perspective.

Advances in medical education and practice

Menezes A, Burgess A, Clarke AJ, Mellis C.
PMID: 26848282
Adv Med Educ Pract. 2016 Jan 18;7:31-8. doi: 10.2147/AMEP.S94570. eCollection 2016.

PURPOSE: Peer tutoring offers a valuable method of enhancing students' learning experience in medical school. Junior students learn from senior peers to reinforce curriculum content in an engaging community environment. The aim of our study was to assess tutees'...

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Menezes A, Burgess A, Clarke AJ, et al. Peer-assisted learning in medical school: tutees' perspective. Adv Med Educ Pract. 2016;7:31-8doi: 10.2147/AMEP.S94570.
Menezes, A., Burgess, A., Clarke, A. J., & Mellis, C. (2016). Peer-assisted learning in medical school: tutees' perspective. Advances in medical education and practice, 731-8. https://doi.org/10.2147/AMEP.S94570
Menezes, Audrey, et al. "Peer-assisted learning in medical school: tutees' perspective." Advances in medical education and practice vol. 7 (2016): 31-8. doi: https://doi.org/10.2147/AMEP.S94570
Menezes A, Burgess A, Clarke AJ, Mellis C. Peer-assisted learning in medical school: tutees' perspective. Adv Med Educ Pract. 2016 Jan 18;7:31-8. doi: 10.2147/AMEP.S94570. eCollection 2016. PMID: 26848282; PMCID: PMC4723028.
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Showing 1 to 12 of 603 entries