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Showing 1 to 12 of 16 entries
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Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets.

Genome announcements

Dichosa AE, Davenport KW, Li PE, Ahmed SA, Daligault H, Gleasner CD, Kunde Y, McMurry K, Lo CC, Reitenga KG, Daughton AR, Shen X, Frietze S, Wang D, Johnson SL, Drautz-Moses DI, Schuster S, Chain PS, Han C.
PMID: 25792053
Genome Announc. 2015 Mar 19;3(2). doi: 10.1128/genomeA.00132-15.

We report here the genome sequence of Thauera sp. strain SWB20, isolated from a Singaporean wastewater treatment facility using gel microdroplets (GMDs) and single-cell genomics (SCG). This approach provided a single clonal microcolony that was sufficient to obtain a...

Cite
Dichosa AE, Davenport KW, Li PE, et al. Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets. Genome Announc. 2015;3(2)doi: 10.1128/genomeA.00132-15.
Dichosa, A. E., Davenport, K. W., Li, P. E., Ahmed, S. A., Daligault, H., Gleasner, C. D., Kunde, Y., McMurry, K., Lo, C. C., Reitenga, K. G., Daughton, A. R., Shen, X., Frietze, S., Wang, D., Johnson, S. L., Drautz-Moses, D. I., Schuster, S., Chain, P. S., & Han, C. (2015). Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets. Genome announcements, 3(2), . https://doi.org/10.1128/genomeA.00132-15
Dichosa, Armand E K, et al. "Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets." Genome announcements vol. 3,2 (2015). doi: https://doi.org/10.1128/genomeA.00132-15
Dichosa AE, Davenport KW, Li PE, Ahmed SA, Daligault H, Gleasner CD, Kunde Y, McMurry K, Lo CC, Reitenga KG, Daughton AR, Shen X, Frietze S, Wang D, Johnson SL, Drautz-Moses DI, Schuster S, Chain PS, Han C. Draft Genome Sequence of Thauera sp. Strain SWB20, Isolated from a Singapore Wastewater Treatment Facility Using Gel Microdroplets. Genome Announc. 2015 Mar 19;3(2). doi: 10.1128/genomeA.00132-15. PMID: 25792053; PMCID: PMC4395064.
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Discovery of an Antarctic Ascidian-Associated Uncultivated .

mSphere

Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG.
PMID: 34851164
mSphere. 2021 Dec 01;e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01.

The Antarctic marine ecosystem harbors a wealth of biological and chemical innovation that has risen in concert over millennia since the isolation of the continent and formation of the Antarctic circumpolar current. Scientific inquiry into the novelty of marine...

Cite
Murray AE, Lo CC, Daligault HE, et al. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021;e0075921doi: 10.1128/mSphere.00759-21.
Murray, A. E., Lo, C. C., Daligault, H. E., Avalon, N. E., Read, R. W., Davenport, K. W., Higham, M. L., Kunde, Y., Dichosa, A. E. K., Baker, B. J., & Chain, P. S. G. (2021). Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere, e0075921. https://doi.org/10.1128/mSphere.00759-21
Murray, Alison E, et al. "Discovery of an Antarctic Ascidian-Associated Uncultivated ." mSphere vol. (2021): e0075921. doi: https://doi.org/10.1128/mSphere.00759-21
Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021 Dec 01;e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01. PMID: 34851164; PMCID: PMC8636102.
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Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian.

Frontiers in chemistry

Avalon NE, Murray AE, Daligault HE, Lo CC, Davenport KW, Dichosa AEK, Chain PSG, Baker BJ.
PMID: 35004620
Front Chem. 2021 Dec 24;9:802574. doi: 10.3389/fchem.2021.802574. eCollection 2021.

Complex interactions exist between microbiomes and their hosts. Increasingly, defensive metabolites that have been attributed to host biosynthetic capability are now being recognized as products of host-associated microbes. These unique metabolites often have bioactivity targets in human disease and...

Cite
Avalon NE, Murray AE, Daligault HE, et al. Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian. Front Chem. 2021;9:802574doi: 10.3389/fchem.2021.802574.
Avalon, N. E., Murray, A. E., Daligault, H. E., Lo, C. C., Davenport, K. W., Dichosa, A. E. K., Chain, P. S. G., & Baker, B. J. (2021). Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian. Frontiers in chemistry, 9802574. https://doi.org/10.3389/fchem.2021.802574
Avalon, Nicole E, et al. "Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian." Frontiers in chemistry vol. 9 (2021): 802574. doi: https://doi.org/10.3389/fchem.2021.802574
Avalon NE, Murray AE, Daligault HE, Lo CC, Davenport KW, Dichosa AEK, Chain PSG, Baker BJ. Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian. Front Chem. 2021 Dec 24;9:802574. doi: 10.3389/fchem.2021.802574. eCollection 2021. PMID: 35004620; PMCID: PMC8739492.
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Discovery of an Antarctic Ascidian-Associated Uncultivated .

mSphere

Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG.
PMID: 34851164
mSphere. 2021 Dec 22;6(6):e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01.

The Antarctic marine ecosystem harbors a wealth of biological and chemical innovation that has risen in concert over millennia since the isolation of the continent and formation of the Antarctic circumpolar current. Scientific inquiry into the novelty of marine...

Cite
Murray AE, Lo CC, Daligault HE, et al. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021;6(6):e0075921doi: 10.1128/mSphere.00759-21.
Murray, A. E., Lo, C. C., Daligault, H. E., Avalon, N. E., Read, R. W., Davenport, K. W., Higham, M. L., Kunde, Y., Dichosa, A. E. K., Baker, B. J., & Chain, P. S. G. (2021). Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere, 6(6), e0075921. https://doi.org/10.1128/mSphere.00759-21
Murray, Alison E, et al. "Discovery of an Antarctic Ascidian-Associated Uncultivated ." mSphere vol. 6,6 (2021): e0075921. doi: https://doi.org/10.1128/mSphere.00759-21
Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021 Dec 22;6(6):e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01. PMID: 34851164; PMCID: PMC8636102.
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Discovery of an Antarctic Ascidian-Associated Uncultivated .

mSphere

Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG.
PMID: 34851164
mSphere. 2021 Dec 01;e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01.

The Antarctic marine ecosystem harbors a wealth of biological and chemical innovation that has risen in concert over millennia since the isolation of the continent and formation of the Antarctic circumpolar current. Scientific inquiry into the novelty of marine...

Cite
Murray AE, Lo CC, Daligault HE, et al. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021;e0075921doi: 10.1128/mSphere.00759-21.
Murray, A. E., Lo, C. C., Daligault, H. E., Avalon, N. E., Read, R. W., Davenport, K. W., Higham, M. L., Kunde, Y., Dichosa, A. E. K., Baker, B. J., & Chain, P. S. G. (2021). Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere, e0075921. https://doi.org/10.1128/mSphere.00759-21
Murray, Alison E, et al. "Discovery of an Antarctic Ascidian-Associated Uncultivated ." mSphere vol. (2021): e0075921. doi: https://doi.org/10.1128/mSphere.00759-21
Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021 Dec 01;e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01. PMID: 34851164.
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Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian.

Frontiers in chemistry

Avalon NE, Murray AE, Daligault HE, Lo CC, Davenport KW, Dichosa AEK, Chain PSG, Baker BJ.
PMID: 35004620
Front Chem. 2021 Dec 24;9:802574. doi: 10.3389/fchem.2021.802574. eCollection 2021.

Complex interactions exist between microbiomes and their hosts. Increasingly, defensive metabolites that have been attributed to host biosynthetic capability are now being recognized as products of host-associated microbes. These unique metabolites often have bioactivity targets in human disease and...

Cite
Avalon NE, Murray AE, Daligault HE, et al. Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian. Front Chem. 2021;9:802574doi: 10.3389/fchem.2021.802574.
Avalon, N. E., Murray, A. E., Daligault, H. E., Lo, C. C., Davenport, K. W., Dichosa, A. E. K., Chain, P. S. G., & Baker, B. J. (2021). Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian. Frontiers in chemistry, 9802574. https://doi.org/10.3389/fchem.2021.802574
Avalon, Nicole E, et al. "Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian." Frontiers in chemistry vol. 9 (2021): 802574. doi: https://doi.org/10.3389/fchem.2021.802574
Avalon NE, Murray AE, Daligault HE, Lo CC, Davenport KW, Dichosa AEK, Chain PSG, Baker BJ. Bioinformatic and Mechanistic Analysis of the Palmerolide PKS-NRPS Biosynthetic Pathway From the Microbiome of an Antarctic Ascidian. Front Chem. 2021 Dec 24;9:802574. doi: 10.3389/fchem.2021.802574. eCollection 2021. PMID: 35004620; PMCID: PMC8739492.
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Discovery of an Antarctic Ascidian-Associated Uncultivated .

mSphere

Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG.
PMID: 34851164
mSphere. 2021 Dec 22;6(6):e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01.

The Antarctic marine ecosystem harbors a wealth of biological and chemical innovation that has risen in concert over millennia since the isolation of the continent and formation of the Antarctic circumpolar current. Scientific inquiry into the novelty of marine...

Cite
Murray AE, Lo CC, Daligault HE, et al. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021;6(6):e0075921doi: 10.1128/mSphere.00759-21.
Murray, A. E., Lo, C. C., Daligault, H. E., Avalon, N. E., Read, R. W., Davenport, K. W., Higham, M. L., Kunde, Y., Dichosa, A. E. K., Baker, B. J., & Chain, P. S. G. (2021). Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere, 6(6), e0075921. https://doi.org/10.1128/mSphere.00759-21
Murray, Alison E, et al. "Discovery of an Antarctic Ascidian-Associated Uncultivated ." mSphere vol. 6,6 (2021): e0075921. doi: https://doi.org/10.1128/mSphere.00759-21
Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021 Dec 22;6(6):e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01. PMID: 34851164; PMCID: PMC8636102.
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Salivary microbiomes of indigenous Tsimane mothers and infants are distinct despite frequent premastication.

PeerJ

Han CS, Martin MA, Dichosa AEK, Daughton AR, Frietze S, Kaplan H, Gurven MD, Alcock J.
PMID: 27833819
PeerJ. 2016 Nov 03;4:e2660. doi: 10.7717/peerj.2660. eCollection 2016.

BACKGROUND: Premastication, the transfer of pre-chewed food, is a common infant and young child feeding practice among the Tsimane, forager-horticulturalists living in the Bolivian Amazon. Research conducted primarily with Western populations has shown that infants harbor distinct oral microbiota...

Cite
Han CS, Martin MA, Dichosa AEK, et al. Salivary microbiomes of indigenous Tsimane mothers and infants are distinct despite frequent premastication. PeerJ. 2016;4:e2660doi: 10.7717/peerj.2660.
Han, C. S., Martin, M. A., Dichosa, A. E. K., Daughton, A. R., Frietze, S., Kaplan, H., Gurven, M. D., & Alcock, J. (2016). Salivary microbiomes of indigenous Tsimane mothers and infants are distinct despite frequent premastication. PeerJ, 4e2660. https://doi.org/10.7717/peerj.2660
Han, Cliff S, et al. "Salivary microbiomes of indigenous Tsimane mothers and infants are distinct despite frequent premastication." PeerJ vol. 4 (2016): e2660. doi: https://doi.org/10.7717/peerj.2660
Han CS, Martin MA, Dichosa AEK, Daughton AR, Frietze S, Kaplan H, Gurven MD, Alcock J. Salivary microbiomes of indigenous Tsimane mothers and infants are distinct despite frequent premastication. PeerJ. 2016 Nov 03;4:e2660. doi: 10.7717/peerj.2660. eCollection 2016. PMID: 27833819; PMCID: PMC5101600.
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Discovery of an Antarctic Ascidian-Associated Uncultivated .

mSphere

Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG.
PMID: 34851164
mSphere. 2021 Dec 01;e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01.

The Antarctic marine ecosystem harbors a wealth of biological and chemical innovation that has risen in concert over millennia since the isolation of the continent and formation of the Antarctic circumpolar current. Scientific inquiry into the novelty of marine...

Cite
Murray AE, Lo CC, Daligault HE, et al. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021;e0075921doi: 10.1128/mSphere.00759-21.
Murray, A. E., Lo, C. C., Daligault, H. E., Avalon, N. E., Read, R. W., Davenport, K. W., Higham, M. L., Kunde, Y., Dichosa, A. E. K., Baker, B. J., & Chain, P. S. G. (2021). Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere, e0075921. https://doi.org/10.1128/mSphere.00759-21
Murray, Alison E, et al. "Discovery of an Antarctic Ascidian-Associated Uncultivated ." mSphere vol. (2021): e0075921. doi: https://doi.org/10.1128/mSphere.00759-21
Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021 Dec 01;e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01. PMID: 34851164; PMCID: PMC8636102.
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Complete Genome Sequence of a Parabacteroides distasonis Strain (CavFT hAR46) Isolated from a Gut Wall-Cavitating Microlesion in a Patient with Severe Crohn's Disease.

Microbiology resource announcements

Yang F, Kumar A, Davenport KW, Kelliher JM, Ezeji JC, Good CE, Jacobs MR, Conger M, West G, Fiocchi C, Cominelli F, Dichosa AEK, Rodriguez-Palacios A.
PMID: 31488526
Microbiol Resour Announc. 2019 Sep 05;8(36). doi: 10.1128/MRA.00585-19.

Crohn's disease (CD) is a chronic inflammatory bowel disease (IBD) of the digestive tract in humans. There is evidence that

Cite
Yang F, Kumar A, Davenport KW, et al. Complete Genome Sequence of a Parabacteroides distasonis Strain (CavFT hAR46) Isolated from a Gut Wall-Cavitating Microlesion in a Patient with Severe Crohn's Disease. Microbiol Resour Announc. 2019;8(36)doi: 10.1128/MRA.00585-19.
Yang, F., Kumar, A., Davenport, K. W., Kelliher, J. M., Ezeji, J. C., Good, C. E., Jacobs, M. R., Conger, M., West, G., Fiocchi, C., Cominelli, F., Dichosa, A. E. K., & Rodriguez-Palacios, A. (2019). Complete Genome Sequence of a Parabacteroides distasonis Strain (CavFT hAR46) Isolated from a Gut Wall-Cavitating Microlesion in a Patient with Severe Crohn's Disease. Microbiology resource announcements, 8(36), . https://doi.org/10.1128/MRA.00585-19
Yang, Falong, et al. "Complete Genome Sequence of a Parabacteroides distasonis Strain (CavFT hAR46) Isolated from a Gut Wall-Cavitating Microlesion in a Patient with Severe Crohn's Disease." Microbiology resource announcements vol. 8,36 (2019). doi: https://doi.org/10.1128/MRA.00585-19
Yang F, Kumar A, Davenport KW, Kelliher JM, Ezeji JC, Good CE, Jacobs MR, Conger M, West G, Fiocchi C, Cominelli F, Dichosa AEK, Rodriguez-Palacios A. Complete Genome Sequence of a Parabacteroides distasonis Strain (CavFT hAR46) Isolated from a Gut Wall-Cavitating Microlesion in a Patient with Severe Crohn's Disease. Microbiol Resour Announc. 2019 Sep 05;8(36). doi: 10.1128/MRA.00585-19. PMID: 31488526; PMCID: PMC6728636.
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Discovery of an Antarctic Ascidian-Associated Uncultivated .

mSphere

Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG.
PMID: 34851164
mSphere. 2021 Dec 22;6(6):e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01.

The Antarctic marine ecosystem harbors a wealth of biological and chemical innovation that has risen in concert over millennia since the isolation of the continent and formation of the Antarctic circumpolar current. Scientific inquiry into the novelty of marine...

Cite
Murray AE, Lo CC, Daligault HE, et al. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021;6(6):e0075921doi: 10.1128/mSphere.00759-21.
Murray, A. E., Lo, C. C., Daligault, H. E., Avalon, N. E., Read, R. W., Davenport, K. W., Higham, M. L., Kunde, Y., Dichosa, A. E. K., Baker, B. J., & Chain, P. S. G. (2021). Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere, 6(6), e0075921. https://doi.org/10.1128/mSphere.00759-21
Murray, Alison E, et al. "Discovery of an Antarctic Ascidian-Associated Uncultivated ." mSphere vol. 6,6 (2021): e0075921. doi: https://doi.org/10.1128/mSphere.00759-21
Murray AE, Lo CC, Daligault HE, Avalon NE, Read RW, Davenport KW, Higham ML, Kunde Y, Dichosa AEK, Baker BJ, Chain PSG. Discovery of an Antarctic Ascidian-Associated Uncultivated . mSphere. 2021 Dec 22;6(6):e0075921. doi: 10.1128/mSphere.00759-21. Epub 2021 Dec 01. PMID: 34851164; PMCID: PMC8636102.
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Draft Genome Sequence of Enterobacter cloacae Strain S611.

Genome announcements

Wang D, Han CS, Dichosa AE, Gleasner CD, Johnson SL, Daligault HE, Davenport KW, Li PE, Pierson EA, Pierson LS.
PMID: 25502660
Genome Announc. 2014 Dec 11;2(6). doi: 10.1128/genomeA.00710-14.

We report draft genomes of Enterobacter cloacae strain S611, an endophytic bacterium isolated from surface-sterilized germinating wheat seeds. We present the assembly and annotation of its genome, which may provide insights into the metabolic pathways involved in adaptation.

Cite
Wang D, Han CS, Dichosa AE, et al. Draft Genome Sequence of Enterobacter cloacae Strain S611. Genome Announc. 2014;2(6)doi: 10.1128/genomeA.00710-14.
Wang, D., Han, C. S., Dichosa, A. E., Gleasner, C. D., Johnson, S. L., Daligault, H. E., Davenport, K. W., Li, P. E., Pierson, E. A., & Pierson, L. S. (2014). Draft Genome Sequence of Enterobacter cloacae Strain S611. Genome announcements, 2(6), . https://doi.org/10.1128/genomeA.00710-14
Wang, Dongping, et al. "Draft Genome Sequence of Enterobacter cloacae Strain S611." Genome announcements vol. 2,6 (2014). doi: https://doi.org/10.1128/genomeA.00710-14
Wang D, Han CS, Dichosa AE, Gleasner CD, Johnson SL, Daligault HE, Davenport KW, Li PE, Pierson EA, Pierson LS. Draft Genome Sequence of Enterobacter cloacae Strain S611. Genome Announc. 2014 Dec 11;2(6). doi: 10.1128/genomeA.00710-14. PMID: 25502660; PMCID: PMC4263822.
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Showing 1 to 12 of 16 entries