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Accelerated cryo-EM structure determination with parallelisation using GPUs in RELION-2

pipeline programs

Forsberg BO, Kimanius D, Lindahl E, Scheres SHW.
GSID: sb4nEjZ4N0oJ
D Kimanius, BO Forsberg, SHW Scheres, E Lindahl - elife, 2016 - elifesciences.org

By reaching near-atomic resolution for a wide range of specimens, single-particle cryo-EM structure determination is transforming structural biology. However, the necessary …

Safety climate and readiness for implementation of evidence and person centered practice - A national study of registered nurses in general surgical care at Swedish university hospitals.

BMC nursing

Olsson C, Forsberg A, Bjerså K.
PMID: 27625589
BMC Nurs. 2016 Sep 13;15(1):54. doi: 10.1186/s12912-016-0174-2. eCollection 2016.

BACKGROUND: The rationale behind this study is the increasing research on relationships between patient safety, evidence based practice and person centered care, and the growing interest in outcomes of surgical patients. The aim of this study was to explore...

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Olsson C, Forsberg A, Bjerså K. Safety climate and readiness for implementation of evidence and person centered practice - A national study of registered nurses in general surgical care at Swedish university hospitals. BMC Nurs. 2016;15(1):54doi: 10.1186/s12912-016-0174-2.
Olsson, C., Forsberg, A., & Bjerså, K. (2016). Safety climate and readiness for implementation of evidence and person centered practice - A national study of registered nurses in general surgical care at Swedish university hospitals. BMC nursing, 15(1), 54. https://doi.org/10.1186/s12912-016-0174-2
Olsson, Camilla, et al. "Safety climate and readiness for implementation of evidence and person centered practice - A national study of registered nurses in general surgical care at Swedish university hospitals." BMC nursing vol. 15,1 (2016): 54. doi: https://doi.org/10.1186/s12912-016-0174-2
Olsson C, Forsberg A, Bjerså K. Safety climate and readiness for implementation of evidence and person centered practice - A national study of registered nurses in general surgical care at Swedish university hospitals. BMC Nurs. 2016 Sep 13;15(1):54. doi: 10.1186/s12912-016-0174-2. eCollection 2016. PMID: 27625589; PMCID: PMC5020433.
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Hill classification is superior to the axial length of a hiatal hernia for assessment of the mechanical anti-reflux barrier at the gastroesophageal junction.

Endoscopy international open

Hansdotter I, Björ O, Andreasson A, Agreus L, Hellström P, Forsberg A, Talley NJ, Vieth M, Wallner B.
PMID: 27004249
Endosc Int Open. 2016 Mar;4(3):E311-7. doi: 10.1055/s-0042-101021. Epub 2016 Feb 10.

BACKGROUND AND STUDY AIMS: The pathogenesis of gastroesophageal reflux disease (GERD) is multifactorial, including the mechanical anti-reflux barrier of the gastroesophageal junction. This barrier can be evaluated endoscopically in two ways: by measuring the axial length of any hiatal...

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Hansdotter I, Björ O, Andreasson A, et al. Hill classification is superior to the axial length of a hiatal hernia for assessment of the mechanical anti-reflux barrier at the gastroesophageal junction. Endosc Int Open. 2016;4(3):E311-7doi: 10.1055/s-0042-101021.
Hansdotter, I., Björ, O., Andreasson, A., Agreus, L., Hellström, P., Forsberg, A., Talley, N. J., Vieth, M., & Wallner, B. (2016). Hill classification is superior to the axial length of a hiatal hernia for assessment of the mechanical anti-reflux barrier at the gastroesophageal junction. Endoscopy international open, 4(3), E311-7. https://doi.org/10.1055/s-0042-101021
Hansdotter, Ida, et al. "Hill classification is superior to the axial length of a hiatal hernia for assessment of the mechanical anti-reflux barrier at the gastroesophageal junction." Endoscopy international open vol. 4,3 (2016): E311-7. doi: https://doi.org/10.1055/s-0042-101021
Hansdotter I, Björ O, Andreasson A, Agreus L, Hellström P, Forsberg A, Talley NJ, Vieth M, Wallner B. Hill classification is superior to the axial length of a hiatal hernia for assessment of the mechanical anti-reflux barrier at the gastroesophageal junction. Endosc Int Open. 2016 Mar;4(3):E311-7. doi: 10.1055/s-0042-101021. Epub 2016 Feb 10. PMID: 27004249; PMCID: PMC4798936.
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Surgery in district hospitals in rural Uganda-indications, interventions, and outcomes.

Lancet (London, England)

Löfgren J, Kadobera D, Forsberg BC, Mulowooza J, Wladis A, Nordin P.
PMID: 26313064
Lancet. 2015 Apr 27;385:S18. doi: 10.1016/S0140-6736(15)60813-3. Epub 2015 Apr 26.

BACKGROUND: There is a vast unmet need for surgical interventions in resource scarce settings. The poorest 2 billion people share 3·5% of the world's operations. The highest burden of surgical disease is seen in Africa where surgery could avert...

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Löfgren J, Kadobera D, Forsberg BC, et al. Surgery in district hospitals in rural Uganda-indications, interventions, and outcomes. Lancet. 2015;385:S18doi: 10.1016/S0140-6736(15)60813-3.
Löfgren, J., Kadobera, D., Forsberg, B. C., Mulowooza, J., Wladis, A., & Nordin, P. (2015). Surgery in district hospitals in rural Uganda-indications, interventions, and outcomes. Lancet (London, England), 385S18. https://doi.org/10.1016/S0140-6736(15)60813-3
Löfgren, Jenny, et al. "Surgery in district hospitals in rural Uganda-indications, interventions, and outcomes." Lancet (London, England) vol. 385 (2015): S18. doi: https://doi.org/10.1016/S0140-6736(15)60813-3
Löfgren J, Kadobera D, Forsberg BC, Mulowooza J, Wladis A, Nordin P. Surgery in district hospitals in rural Uganda-indications, interventions, and outcomes. Lancet. 2015 Apr 27;385:S18. doi: 10.1016/S0140-6736(15)60813-3. Epub 2015 Apr 26. PMID: 26313064.
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Correlates of mobile phone use in HIV care: Results from a cross-sectional study in South Africa.

Preventive medicine reports

Madhvani N, Longinetti E, Santacatterina M, Forsberg BC, El-Khatib Z.
PMID: 26844111
Prev Med Rep. 2015 Jun 14;2:512-6. doi: 10.1016/j.pmedr.2015.06.010. eCollection 2015.

OBJECTIVE: Human Immunodeficiency Virus (HIV) is a major disease burden worldwide. Challenges include retaining patients in care and optimizing adherence to Antiretroviral Therapy (ART). One possible solution is using mobile phones as reminder tools. The main aim of our...

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Madhvani N, Longinetti E, Santacatterina M, et al. Correlates of mobile phone use in HIV care: Results from a cross-sectional study in South Africa. Prev Med Rep. 2015;2:512-6doi: 10.1016/j.pmedr.2015.06.010.
Madhvani, N., Longinetti, E., Santacatterina, M., Forsberg, B. C., & El-Khatib, Z. (2015). Correlates of mobile phone use in HIV care: Results from a cross-sectional study in South Africa. Preventive medicine reports, 2512-6. https://doi.org/10.1016/j.pmedr.2015.06.010
Madhvani, Naieya, et al. "Correlates of mobile phone use in HIV care: Results from a cross-sectional study in South Africa." Preventive medicine reports vol. 2 (2015): 512-6. doi: https://doi.org/10.1016/j.pmedr.2015.06.010
Madhvani N, Longinetti E, Santacatterina M, Forsberg BC, El-Khatib Z. Correlates of mobile phone use in HIV care: Results from a cross-sectional study in South Africa. Prev Med Rep. 2015 Jun 14;2:512-6. doi: 10.1016/j.pmedr.2015.06.010. eCollection 2015. PMID: 26844111; PMCID: PMC4721279.
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Effects on Balance and Walking with the CoDuSe Balance Exercise Program in People with Multiple Sclerosis: A Multicenter Randomized Controlled Trial.

Multiple sclerosis international

Forsberg A, von Koch L, Nilsagård Y.
PMID: 28042485
Mult Scler Int. 2016;2016:7076265. doi: 10.1155/2016/7076265. Epub 2016 Nov 30.

No abstract available.

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Forsberg A, von Koch L, Nilsagård Y. Effects on Balance and Walking with the CoDuSe Balance Exercise Program in People with Multiple Sclerosis: A Multicenter Randomized Controlled Trial. Mult Scler Int. 2016;2016:7076265doi: 10.1155/2016/7076265.
Forsberg, A., von Koch, L., & Nilsagård, Y. (2016). Effects on Balance and Walking with the CoDuSe Balance Exercise Program in People with Multiple Sclerosis: A Multicenter Randomized Controlled Trial. Multiple sclerosis international, 20167076265. https://doi.org/10.1155/2016/7076265
Forsberg, Anette, et al. "Effects on Balance and Walking with the CoDuSe Balance Exercise Program in People with Multiple Sclerosis: A Multicenter Randomized Controlled Trial." Multiple sclerosis international vol. 2016 (2016): 7076265. doi: https://doi.org/10.1155/2016/7076265
Forsberg A, von Koch L, Nilsagård Y. Effects on Balance and Walking with the CoDuSe Balance Exercise Program in People with Multiple Sclerosis: A Multicenter Randomized Controlled Trial. Mult Scler Int. 2016;2016:7076265. doi: 10.1155/2016/7076265. Epub 2016 Nov 30. PMID: 28042485; PMCID: PMC5155099.
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Pitfalls, Errors, and Unintended Consequences in Musculoskeletal Oncology: How They Occur and How They Can Be Avoided.

JBJS reviews

Potter BK, Forsberg JA, Conway S, Morris CD, Temple HT.
PMID: 27490398
JBJS Rev. 2013 Nov 19;1(1). doi: 10.2106/JBJS.RVW.M.00028.

No abstract available.

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Potter BK, Forsberg JA, Conway S, et al. Pitfalls, Errors, and Unintended Consequences in Musculoskeletal Oncology: How They Occur and How They Can Be Avoided. JBJS Rev. 2013;1(1)doi: 10.2106/JBJS.RVW.M.00028.
Potter, B. K., Forsberg, J. A., Conway, S., Morris, C. D., & Temple, H. T. (2013). Pitfalls, Errors, and Unintended Consequences in Musculoskeletal Oncology: How They Occur and How They Can Be Avoided. JBJS reviews, 1(1), . https://doi.org/10.2106/JBJS.RVW.M.00028
Potter, Benjamin K, et al. "Pitfalls, Errors, and Unintended Consequences in Musculoskeletal Oncology: How They Occur and How They Can Be Avoided." JBJS reviews vol. 1,1 (2013). doi: https://doi.org/10.2106/JBJS.RVW.M.00028
Potter BK, Forsberg JA, Conway S, Morris CD, Temple HT. Pitfalls, Errors, and Unintended Consequences in Musculoskeletal Oncology: How They Occur and How They Can Be Avoided. JBJS Rev. 2013 Nov 19;1(1). doi: 10.2106/JBJS.RVW.M.00028. PMID: 27490398.
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Production of asymmetric hybrids between Arabidopsis thaliana and Brassica napus utilizing an efficient protoplast culture system.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik

Yamagishi H, Landgren M, Forsberg J, Glimelius K.
PMID: 12582600
Theor Appl Genet. 2002 May;104(6):959-964. doi: 10.1007/s00122-002-0881-9. Epub 2002 Apr 06.

Application of the protoplast culture method developed for Brassica protoplasts to protoplasts of Arabidopsis thaliana has increased the opportunities for interspecific hybridizations involving Arabidopsis. A more-efficient and much-simpler method was established compared to the earlier-reported protocol developed for A....

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Yamagishi H, Landgren M, Forsberg J, et al. Production of asymmetric hybrids between Arabidopsis thaliana and Brassica napus utilizing an efficient protoplast culture system. Theor Appl Genet. 2002;104(6):959-964doi: 10.1007/s00122-002-0881-9.
Yamagishi, H., Landgren, M., Forsberg, J., & Glimelius, K. (2002). Production of asymmetric hybrids between Arabidopsis thaliana and Brassica napus utilizing an efficient protoplast culture system. TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 104(6), 959-964. https://doi.org/10.1007/s00122-002-0881-9
Yamagishi, H., et al. "Production of asymmetric hybrids between Arabidopsis thaliana and Brassica napus utilizing an efficient protoplast culture system." TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik vol. 104,6 (2002): 959-964. doi: https://doi.org/10.1007/s00122-002-0881-9
Yamagishi H, Landgren M, Forsberg J, Glimelius K. Production of asymmetric hybrids between Arabidopsis thaliana and Brassica napus utilizing an efficient protoplast culture system. Theor Appl Genet. 2002 May;104(6):959-964. doi: 10.1007/s00122-002-0881-9. Epub 2002 Apr 06. PMID: 12582600.
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Resonant inelastic x-ray scattering at the oxygen K resonance of NiO: nonlocal charge transfer and double-singlet excitations.

Physical review letters

Duda LC, Schmitt T, Magnuson M, Forsberg J, Olsson A, Nordgren J, Okada K, Kotani A.
PMID: 16606046
Phys Rev Lett. 2006 Feb 17;96(6):067402. doi: 10.1103/PhysRevLett.96.067402. Epub 2006 Feb 16.

We report high-resolution polarization-dependent resonant inelastic x-ray scattering (RIXS) at the O K resonance of NiO showing a rich excitation spectrum. We perform multisite Ni6O19 cluster model calculations, revealing that solid state effects are substantial. We identify a nonlocal...

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Duda LC, Schmitt T, Magnuson M, et al. Resonant inelastic x-ray scattering at the oxygen K resonance of NiO: nonlocal charge transfer and double-singlet excitations. Phys Rev Lett. 2006;96(6):067402doi: 10.1103/PhysRevLett.96.067402.
Duda, L. C., Schmitt, T., Magnuson, M., Forsberg, J., Olsson, A., Nordgren, J., Okada, K., & Kotani, A. (2006). Resonant inelastic x-ray scattering at the oxygen K resonance of NiO: nonlocal charge transfer and double-singlet excitations. Physical review letters, 96(6), 067402. https://doi.org/10.1103/PhysRevLett.96.067402
Duda, L-C, et al. "Resonant inelastic x-ray scattering at the oxygen K resonance of NiO: nonlocal charge transfer and double-singlet excitations." Physical review letters vol. 96,6 (2006): 067402. doi: https://doi.org/10.1103/PhysRevLett.96.067402
Duda LC, Schmitt T, Magnuson M, Forsberg J, Olsson A, Nordgren J, Okada K, Kotani A. Resonant inelastic x-ray scattering at the oxygen K resonance of NiO: nonlocal charge transfer and double-singlet excitations. Phys Rev Lett. 2006 Feb 17;96(6):067402. doi: 10.1103/PhysRevLett.96.067402. Epub 2006 Feb 16. PMID: 16606046.
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Features of Fibrobacter intestinalis DR7 mutant which is impaired with its ability to adhere to cellulose.

Anaerobe

Miron J, Forsberg CW.
PMID: 16887622
Anaerobe. 1998 Feb;4(1):35-43. doi: 10.1006/anae.1997.0132.

A spontaneous adhesion-defective mutant (DR7-M) of Fibrobacter intestinalis DR7 was isolated which was capable of growing on glucose and cellobiose, but impaired in its capacity to degrade cellulose. Levels of enzyme activities were determined in solubilized fractions of DR7...

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Miron J, Forsberg CW. Features of Fibrobacter intestinalis DR7 mutant which is impaired with its ability to adhere to cellulose. Anaerobe. 1998;4(1):35-43doi: 10.1006/anae.1997.0132.
Miron, J., & Forsberg, C. W. (1998). Features of Fibrobacter intestinalis DR7 mutant which is impaired with its ability to adhere to cellulose. Anaerobe, 4(1), 35-43. https://doi.org/10.1006/anae.1997.0132
Miron, J, and Forsberg, C W. "Features of Fibrobacter intestinalis DR7 mutant which is impaired with its ability to adhere to cellulose." Anaerobe vol. 4,1 (1998): 35-43. doi: https://doi.org/10.1006/anae.1997.0132
Miron J, Forsberg CW. Features of Fibrobacter intestinalis DR7 mutant which is impaired with its ability to adhere to cellulose. Anaerobe. 1998 Feb;4(1):35-43. doi: 10.1006/anae.1997.0132. PMID: 16887622.
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Unidirectional Influx and Net Accumulation of PIB.

The open neuroimaging journal

Blomquist G, Engler H, Nordberg A, Ringheim A, Wall A, Forsberg A, Estrada S, Frändberg P, Antoni G, Långström B.
PMID: 19526073
Open Neuroimag J. 2008 Nov 13;2:114-25. doi: 10.2174/1874440000802010114.

The compound {N-methyl-[(11)C]}2-(4'-methylaminophenyl)-6-hydroxybenzothiazole, "PIB", measured by positron emission tomography, has been demonstrated to image brain beta-amyloid deposition in Alzheimer's disease (AD). In the present study the benefit of measuring the PIB accumulation rate together with the unidirectional influx of...

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Blomquist G, Engler H, Nordberg A, et al. Unidirectional Influx and Net Accumulation of PIB. Open Neuroimag J. 2008;2:114-25doi: 10.2174/1874440000802010114.
Blomquist, G., Engler, H., Nordberg, A., Ringheim, A., Wall, A., Forsberg, A., Estrada, S., Frändberg, P., Antoni, G., & Långström, B. (2008). Unidirectional Influx and Net Accumulation of PIB. The open neuroimaging journal, 2114-25. https://doi.org/10.2174/1874440000802010114
Blomquist, Gunnar, et al. "Unidirectional Influx and Net Accumulation of PIB." The open neuroimaging journal vol. 2 (2008): 114-25. doi: https://doi.org/10.2174/1874440000802010114
Blomquist G, Engler H, Nordberg A, Ringheim A, Wall A, Forsberg A, Estrada S, Frändberg P, Antoni G, Långström B. Unidirectional Influx and Net Accumulation of PIB. Open Neuroimag J. 2008 Nov 13;2:114-25. doi: 10.2174/1874440000802010114. PMID: 19526073; PMCID: PMC2695622.
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The release of fermentable carbohydrate from peat by steam explosion and its use in the microbial production of solvents.

Biotechnology and bioengineering

Forsberg CW, Schellhorn HE, Gibbins LN, Maine F, Mason E.
PMID: 18555312
Biotechnol Bioeng. 1986 Feb;28(2):176-84. doi: 10.1002/bit.260280205.

Steam treatment of peat at 200 degrees C for 3 min, followed by instantaneous decompression (steam explosion), solubilized up to 28% of the dry matter. Seventy-five percent of the solubilized material was carbohydrate, 33% of which was composed of...

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Forsberg CW, Schellhorn HE, Gibbins LN, et al. The release of fermentable carbohydrate from peat by steam explosion and its use in the microbial production of solvents. Biotechnol Bioeng. 1986;28(2):176-84doi: 10.1002/bit.260280205.
Forsberg, C. W., Schellhorn, H. E., Gibbins, L. N., Maine, F., & Mason, E. (1986). The release of fermentable carbohydrate from peat by steam explosion and its use in the microbial production of solvents. Biotechnology and bioengineering, 28(2), 176-84. https://doi.org/10.1002/bit.260280205
Forsberg, C W, et al. "The release of fermentable carbohydrate from peat by steam explosion and its use in the microbial production of solvents." Biotechnology and bioengineering vol. 28,2 (1986): 176-84. doi: https://doi.org/10.1002/bit.260280205
Forsberg CW, Schellhorn HE, Gibbins LN, Maine F, Mason E. The release of fermentable carbohydrate from peat by steam explosion and its use in the microbial production of solvents. Biotechnol Bioeng. 1986 Feb;28(2):176-84. doi: 10.1002/bit.260280205. PMID: 18555312.
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Showing 1 to 12 of 181 entries