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Transdisciplinary graduate training in predictive plant phenomics

Graduate training programs stem

Heindel TJ, Lawrence-Dill CJ, Schnable PS.
GSID: 2vnmyg4oBLEJ
CJ Lawrence-Dill, TJ Heindel, PS Schnable, SJ Strong… - Agronomy, 2018 - mdpi.com

… T-training results in a broad skillset [3]. In most graduate programs, disciplinary skills listed in the stem of the letter ‘T’ constitute the full training regime (green). For P3, cross-cutting skills …

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Lawrence-Dill, C. J., Heindel, T. J., Schnable, P. S., Strong, S. J., Wittrock, J., Losch, M. E., & Dickerson, J. A. (2018). Transdisciplinary graduate training in predictive plant phenomics. Agronomy, 8(5), 73.
Lawrence-Dill, Carolyn J., et al. "Transdisciplinary graduate training in predictive plant phenomics." Agronomy 8.5 (2018): 73.
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Iowa EPSCoR 2014 Annual Project Report-Year 3

EPSCoR Research Infrastructure Improvement Program AND Program Evaluation

Heindel TJ.
GSID: pWY50wG11GwJ
TJ Heindel - core.ac.uk

The vision of the Iowa NSF EPSCoR project “Harnessing Energy Flows in the Biosphere to Build Sustainable Energy Systems” is to establish Iowa as a leader in the world-wide transition in energy supply from mining subsurface (fossil) energy stores...

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Heindel, T. J. Iowa EPSCoR 2014 Annual Project Report-Year 3.
Heindel, Theodore J. "Iowa EPSCoR 2014 Annual Project Report-Year 3."
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Iowa NSF EPSCoR 2015 Annual Report-Year 4

EPSCoR Research Infrastructure Improvement Program AND Program Evaluation

Heindel T.
GSID: OCpR1kxAE78J
T Heindel - 2015

No abstract available.

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Heindel, T. (2015). Iowa NSF EPSCoR 2015 Annual Report-Year 4.
Heindel, Theodore. "Iowa NSF EPSCoR 2015 Annual Report-Year 4." (2015).
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Transcript abundance on its own cannot be used to infer fluxes in central metabolism.

Frontiers in plant science

Schwender J, König C, Klapperstück M, Heinzel N, Munz E, Hebbelmann I, Hay JO, Denolf P, De Bodt S, Redestig H, Caestecker E, Jakob PM, Borisjuk L, Rolletschek H.
PMID: 25506350
Front Plant Sci. 2014 Nov 28;5:668. doi: 10.3389/fpls.2014.00668. eCollection 2014.

An attempt has been made to define the extent to which metabolic flux in central plant metabolism is reflected by changes in the transcriptome and metabolome, based on an analysis of in vitro cultured immature embryos of two oilseed...

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Schwender J, König C, Klapperstück M, et al. Transcript abundance on its own cannot be used to infer fluxes in central metabolism. Front Plant Sci. 2014;5:668doi: 10.3389/fpls.2014.00668.
Schwender, J., König, C., Klapperstück, M., Heinzel, N., Munz, E., Hebbelmann, I., Hay, J. O., Denolf, P., De Bodt, S., Redestig, H., Caestecker, E., Jakob, P. M., Borisjuk, L., & Rolletschek, H. (2014). Transcript abundance on its own cannot be used to infer fluxes in central metabolism. Frontiers in plant science, 5668. https://doi.org/10.3389/fpls.2014.00668
Schwender, Jörg, et al. "Transcript abundance on its own cannot be used to infer fluxes in central metabolism." Frontiers in plant science vol. 5 (2014): 668. doi: https://doi.org/10.3389/fpls.2014.00668
Schwender J, König C, Klapperstück M, Heinzel N, Munz E, Hebbelmann I, Hay JO, Denolf P, De Bodt S, Redestig H, Caestecker E, Jakob PM, Borisjuk L, Rolletschek H. Transcript abundance on its own cannot be used to infer fluxes in central metabolism. Front Plant Sci. 2014 Nov 28;5:668. doi: 10.3389/fpls.2014.00668. eCollection 2014. PMID: 25506350; PMCID: PMC4246676.
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A Convergent Strategy for the Modification of Peptide Nucleic Acids: Novel Mismatch-Specific PNA-Hybridization Probes.

Angewandte Chemie (International ed. in English)

Seitz O, Bergmann F, Heindl D.
PMID: 10425482
Angew Chem Int Ed Engl. 1999 Aug;38(15):2203-2206. doi: 10.1002/(sici)1521-3773(19990802)38:15<2203::aid-anie2203>3.0.co;2-2.

Coupling of nonnatural nucleobases to the orthogonally protected backbone 1 on the solid phase provided access to novel peptide nucleic acid (PNA) conjugates 2, which are difficult to synthesize by standard routes. Hybridization probes containing the thiazolorange dye might...

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Seitz O, Bergmann F, Heindl D. A Convergent Strategy for the Modification of Peptide Nucleic Acids: Novel Mismatch-Specific PNA-Hybridization Probes. Angew Chem Int Ed Engl. 1999;38(15):2203-2206doi: 10.1002/(sici)1521-3773(19990802)38:15<2203::aid-anie2203>3.0.co;2-2.
Seitz, O., Bergmann, F., & Heindl, D. (1999). A Convergent Strategy for the Modification of Peptide Nucleic Acids: Novel Mismatch-Specific PNA-Hybridization Probes. Angewandte Chemie (International ed. in English), 38(15), 2203-2206. https://doi.org/10.1002/(sici)1521-3773(19990802)38:15<2203::aid-anie2203>3.0.co;2-2
Seitz, et al. "A Convergent Strategy for the Modification of Peptide Nucleic Acids: Novel Mismatch-Specific PNA-Hybridization Probes." Angewandte Chemie (International ed. in English) vol. 38,15 (1999): 2203-2206. doi: https://doi.org/10.1002/(sici)1521-3773(19990802)38:15<2203::aid-anie2203>3.0.co;2-2
Seitz O, Bergmann F, Heindl D. A Convergent Strategy for the Modification of Peptide Nucleic Acids: Novel Mismatch-Specific PNA-Hybridization Probes. Angew Chem Int Ed Engl. 1999 Aug;38(15):2203-2206. doi: 10.1002/(sici)1521-3773(19990802)38:15<2203::aid-anie2203>3.0.co;2-2. PMID: 10425482.
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Enantiomeric composition of the polycyclic musks HHCB and AHTN in different aquatic species.

Chirality

Franke S, Meyer C, Heinzel N, Gatermann R, Huhnerfuss H, Rimkus G, Konig WA, Francke W.
PMID: 10561711
Chirality. 1999;11(10):795-801. doi: 10.1002/(SICI)1520-636X(1999)11:10<795::AID-CHIR10>3.0.CO;2-S.

Synthetic polycyclic musk fragrances are mainly represented by the compounds HHCB (Galaxolide(TM)) and AHTN (Tonalide(TM)). Because of their volume of use and their bioaccumulation potential, there is concern with respect to their environmental safety. HHCB and AHTN are chiral...

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Franke S, Meyer C, Heinzel N, et al. Enantiomeric composition of the polycyclic musks HHCB and AHTN in different aquatic species. Chirality. 1999;11(10):795-801doi: 10.1002/(SICI)1520-636X(1999)11:10<795::AID-CHIR10>3.0.CO;2-S.
Franke, S., Meyer, C., Heinzel, N., Gatermann, R., Huhnerfuss, H., Rimkus, G., Konig, W. A., & Francke, W. (1999). Enantiomeric composition of the polycyclic musks HHCB and AHTN in different aquatic species. Chirality, 11(10), 795-801. https://doi.org/10.1002/(SICI)1520-636X(1999)11:10<795::AID-CHIR10>3.0.CO;2-S
Franke, et al. "Enantiomeric composition of the polycyclic musks HHCB and AHTN in different aquatic species." Chirality vol. 11,10 (1999): 795-801. doi: https://doi.org/10.1002/(SICI)1520-636X(1999)11:10<795::AID-CHIR10>3.0.CO;2-S
Franke S, Meyer C, Heinzel N, Gatermann R, Huhnerfuss H, Rimkus G, Konig WA, Francke W. Enantiomeric composition of the polycyclic musks HHCB and AHTN in different aquatic species. Chirality. 1999;11(10):795-801. doi: 10.1002/(SICI)1520-636X(1999)11:10<795::AID-CHIR10>3.0.CO;2-S. PMID: 10561711.
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FROM THE CORRESPONDENCE OF OLIVER WOLCOTT GIBBS.

Science (New York, N.Y.)

Heindel RH.
PMID: 17742896
Science. 1936 Sep 18;84(2177):266-8. doi: 10.1126/science.84.2177.266.

No abstract available.

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Heindel RH. FROM THE CORRESPONDENCE OF OLIVER WOLCOTT GIBBS. Science. 1936;84(2177):266-8doi: 10.1126/science.84.2177.266.
Heindel, R. H. (1936). FROM THE CORRESPONDENCE OF OLIVER WOLCOTT GIBBS. Science (New York, N.Y.), 84(2177), 266-8. https://doi.org/10.1126/science.84.2177.266
Heindel, R H. "FROM THE CORRESPONDENCE OF OLIVER WOLCOTT GIBBS." Science (New York, N.Y.) vol. 84,2177 (1936): 266-8. doi: https://doi.org/10.1126/science.84.2177.266
Heindel RH. FROM THE CORRESPONDENCE OF OLIVER WOLCOTT GIBBS. Science. 1936 Sep 18;84(2177):266-8. doi: 10.1126/science.84.2177.266. PMID: 17742896.
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High-efficiency organic solar concentrators for photovoltaics.

Science (New York, N.Y.)

Currie MJ, Mapel JK, Heidel TD, Goffri S, Baldo MA.
PMID: 18621664
Science. 2008 Jul 11;321(5886):226-8. doi: 10.1126/science.1158342.

The cost of photovoltaic power can be reduced with organic solar concentrators. These are planar waveguides with a thin-film organic coating on the face and inorganic solar cells attached to the edges. Light is absorbed by the coating and...

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Currie MJ, Mapel JK, Heidel TD, et al. High-efficiency organic solar concentrators for photovoltaics. Science. 2008;321(5886):226-8doi: 10.1126/science.1158342.
Currie, M. J., Mapel, J. K., Heidel, T. D., Goffri, S., & Baldo, M. A. (2008). High-efficiency organic solar concentrators for photovoltaics. Science (New York, N.Y.), 321(5886), 226-8. https://doi.org/10.1126/science.1158342
Currie, Michael J, et al. "High-efficiency organic solar concentrators for photovoltaics." Science (New York, N.Y.) vol. 321,5886 (2008): 226-8. doi: https://doi.org/10.1126/science.1158342
Currie MJ, Mapel JK, Heidel TD, Goffri S, Baldo MA. High-efficiency organic solar concentrators for photovoltaics. Science. 2008 Jul 11;321(5886):226-8. doi: 10.1126/science.1158342. PMID: 18621664.
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False positive computed tomography findings in aortic dissection.

Heart, lung & circulation

Shanmugam G, McKeown J, Bayfield M, Hendel N, Hughes C.
PMID: 16352192
Heart Lung Circ. 2004 Jun;13(2):184-7. doi: 10.1016/j.hlc.2004.02.003.

Dissection is the commonest acute catastrophe involving the aorta. Computed tomography (CT) is increasingly used in evaluating patients with suspected aortic dissection. Occasionally normal anatomic structures may be misconstrued as pathologic due of lack of familiarity with anatomical variations....

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Shanmugam G, McKeown J, Bayfield M, et al. False positive computed tomography findings in aortic dissection. Heart Lung Circ. 2004;13(2):184-7doi: 10.1016/j.hlc.2004.02.003.
Shanmugam, G., McKeown, J., Bayfield, M., Hendel, N., & Hughes, C. (2004). False positive computed tomography findings in aortic dissection. Heart, lung & circulation, 13(2), 184-7. https://doi.org/10.1016/j.hlc.2004.02.003
Shanmugam, Ganesh, et al. "False positive computed tomography findings in aortic dissection." Heart, lung & circulation vol. 13,2 (2004): 184-7. doi: https://doi.org/10.1016/j.hlc.2004.02.003
Shanmugam G, McKeown J, Bayfield M, Hendel N, Hughes C. False positive computed tomography findings in aortic dissection. Heart Lung Circ. 2004 Jun;13(2):184-7. doi: 10.1016/j.hlc.2004.02.003. PMID: 16352192.
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A novel procedure for the quantitative analysis of metabolites, storage products and transcripts of laser microdissected seed tissues of Brassica napus.

Plant methods

Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R, Rolletschek H.
PMID: 21718489
Plant Methods. 2011 Jun 30;7:19. doi: 10.1186/1746-4811-7-19.

BACKGROUND: The biology of the seed is complicated by the extensive non-homogeneity (spatial gradients) in gene expression, metabolic conversions and storage product accumulation. The detailed understanding of the mechanisms underlying seed growth and storage therefore requires the development of...

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Schiebold S, Tschiersch H, Borisjuk L, et al. A novel procedure for the quantitative analysis of metabolites, storage products and transcripts of laser microdissected seed tissues of Brassica napus. Plant Methods. 2011;7:19doi: 10.1186/1746-4811-7-19.
Schiebold, S., Tschiersch, H., Borisjuk, L., Heinzel, N., Radchuk, R., & Rolletschek, H. (2011). A novel procedure for the quantitative analysis of metabolites, storage products and transcripts of laser microdissected seed tissues of Brassica napus. Plant methods, 719. https://doi.org/10.1186/1746-4811-7-19
Schiebold, Silke, et al. "A novel procedure for the quantitative analysis of metabolites, storage products and transcripts of laser microdissected seed tissues of Brassica napus." Plant methods vol. 7 (2011): 19. doi: https://doi.org/10.1186/1746-4811-7-19
Schiebold S, Tschiersch H, Borisjuk L, Heinzel N, Radchuk R, Rolletschek H. A novel procedure for the quantitative analysis of metabolites, storage products and transcripts of laser microdissected seed tissues of Brassica napus. Plant Methods. 2011 Jun 30;7:19. doi: 10.1186/1746-4811-7-19. PMID: 21718489; PMCID: PMC3141804.
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Epigenetics as a mechanism linking developmental exposures to long-term toxicity.

Environment international

Barouki R, Melén E, Herceg Z, Beckers J, Chen J, Karagas M, Puga A, Xia Y, Chadwick L, Yan W, Audouze K, Slama R, Heindel J, Grandjean P, Kawamoto T, Nohara K.
PMID: 29499450
Environ Int. 2018 May;114:77-86. doi: 10.1016/j.envint.2018.02.014. Epub 2018 Feb 27.

A variety of experimental and epidemiological studies lend support to the Developmental Origin of Health and Disease (DOHaD) concept. Yet, the actual mechanisms accounting for mid- and long-term effects of early-life exposures remain unclear. Epigenetic alterations such as changes...

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Barouki R, Melén E, Herceg Z, et al. Epigenetics as a mechanism linking developmental exposures to long-term toxicity. Environ Int. 2018;114:77-86doi: 10.1016/j.envint.2018.02.014.
Barouki, R., Melén, E., Herceg, Z., Beckers, J., Chen, J., Karagas, M., Puga, A., Xia, Y., Chadwick, L., Yan, W., Audouze, K., Slama, R., Heindel, J., Grandjean, P., Kawamoto, T., & Nohara, K. (2018). Epigenetics as a mechanism linking developmental exposures to long-term toxicity. Environment international, 11477-86. https://doi.org/10.1016/j.envint.2018.02.014
Barouki, R, et al. "Epigenetics as a mechanism linking developmental exposures to long-term toxicity." Environment international vol. 114 (2018): 77-86. doi: https://doi.org/10.1016/j.envint.2018.02.014
Barouki R, Melén E, Herceg Z, Beckers J, Chen J, Karagas M, Puga A, Xia Y, Chadwick L, Yan W, Audouze K, Slama R, Heindel J, Grandjean P, Kawamoto T, Nohara K. Epigenetics as a mechanism linking developmental exposures to long-term toxicity. Environ Int. 2018 May;114:77-86. doi: 10.1016/j.envint.2018.02.014. Epub 2018 Feb 27. PMID: 29499450; PMCID: PMC5899930.
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Prediction of brain invasion in patients with meningiomas using preoperative magnetic resonance imaging.

Oncotarget

Adeli A, Hess K, Mawrin C, Streckert EMS, Stummer W, Paulus W, Kemmling A, Holling M, Heindel W, Schmidt R, Spille DC, Sporns PB, Brokinkel B.
PMID: 30542511
Oncotarget. 2018 Nov 13;9(89):35974-35982. doi: 10.18632/oncotarget.26313. eCollection 2018 Nov 13.

Brain invasion (BI) in meningiomas impacts WHO grading and therefore adjuvant treatment. However, BI is rare and neurosurgical sampling and neuropathological analyses are not standardised. Moreover, associations with imaging findings are sparsely known. Associations between BI and findings on...

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Adeli A, Hess K, Mawrin C, et al. Prediction of brain invasion in patients with meningiomas using preoperative magnetic resonance imaging. Oncotarget. 2018;9(89):35974-35982doi: 10.18632/oncotarget.26313.
Adeli, A., Hess, K., Mawrin, C., Streckert, E. M. S., Stummer, W., Paulus, W., Kemmling, A., Holling, M., Heindel, W., Schmidt, R., Spille, D. C., Sporns, P. B., & Brokinkel, B. (2018). Prediction of brain invasion in patients with meningiomas using preoperative magnetic resonance imaging. Oncotarget, 9(89), 35974-35982. https://doi.org/10.18632/oncotarget.26313
Adeli, Alborz, et al. "Prediction of brain invasion in patients with meningiomas using preoperative magnetic resonance imaging." Oncotarget vol. 9,89 (2018): 35974-35982. doi: https://doi.org/10.18632/oncotarget.26313
Adeli A, Hess K, Mawrin C, Streckert EMS, Stummer W, Paulus W, Kemmling A, Holling M, Heindel W, Schmidt R, Spille DC, Sporns PB, Brokinkel B. Prediction of brain invasion in patients with meningiomas using preoperative magnetic resonance imaging. Oncotarget. 2018 Nov 13;9(89):35974-35982. doi: 10.18632/oncotarget.26313. eCollection 2018 Nov 13. PMID: 30542511; PMCID: PMC6267603.
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Showing 1 to 12 of 131 entries