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Particle-based modeling of heterogeneous chemical kinetics including mass transfer.

Physical review. E

Sengar A, Kuipers JAM, van Santen RA, Padding JT.
PMID: 28950548
Phys Rev E. 2017 Aug;96(2):022115. doi: 10.1103/PhysRevE.96.022115. Epub 2017 Aug 08.

Connecting the macroscopic world of continuous fields to the microscopic world of discrete molecular events is important for understanding several phenomena occurring at physical boundaries of systems. An important example is heterogeneous catalysis, where reactions take place at active...

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Sengar A, Kuipers JAM, van Santen RA, et al. Particle-based modeling of heterogeneous chemical kinetics including mass transfer. Phys Rev E. 2017;96(2):022115doi: 10.1103/PhysRevE.96.022115.
Sengar, A., Kuipers, J. A. M., van Santen, R. A., & Padding, J. T. (2017). Particle-based modeling of heterogeneous chemical kinetics including mass transfer. Physical review. E, 96(2), 022115. https://doi.org/10.1103/PhysRevE.96.022115
Sengar, A, et al. "Particle-based modeling of heterogeneous chemical kinetics including mass transfer." Physical review. E vol. 96,2 (2017): 022115. doi: https://doi.org/10.1103/PhysRevE.96.022115
Sengar A, Kuipers JAM, van Santen RA, Padding JT. Particle-based modeling of heterogeneous chemical kinetics including mass transfer. Phys Rev E. 2017 Aug;96(2):022115. doi: 10.1103/PhysRevE.96.022115. Epub 2017 Aug 08. PMID: 28950548.
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Substantial (13) C/(12) C and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro.

Environmental microbiology reports

Holler T, Wegener G, Knittel K, Boetius A, Brunner B, Kuypers MM, Widdel F.
PMID: 23765889
Environ Microbiol Rep. 2009 Oct;1(5):370-6. doi: 10.1111/j.1758-2229.2009.00074.x. Epub 2009 Sep 23.

The anaerobic oxidation of methane (AOM) by methanotrophic archaea and sulfate-reducing bacteria is the major sink of methane formed in marine sediments. The study of AOM as well as of methanogenesis in different habitats is essentially connected with the...

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Holler T, Wegener G, Knittel K, et al. Substantial (13) C/(12) C and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro. Environ Microbiol Rep. 2009;1(5):370-6doi: 10.1111/j.1758-2229.2009.00074.x.
Holler, T., Wegener, G., Knittel, K., Boetius, A., Brunner, B., Kuypers, M. M., & Widdel, F. (2009). Substantial (13) C/(12) C and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro. Environmental microbiology reports, 1(5), 370-6. https://doi.org/10.1111/j.1758-2229.2009.00074.x
Holler, Thomas, et al. "Substantial (13) C/(12) C and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro." Environmental microbiology reports vol. 1,5 (2009): 370-6. doi: https://doi.org/10.1111/j.1758-2229.2009.00074.x
Holler T, Wegener G, Knittel K, Boetius A, Brunner B, Kuypers MM, Widdel F. Substantial (13) C/(12) C and D/H fractionation during anaerobic oxidation of methane by marine consortia enriched in vitro. Environ Microbiol Rep. 2009 Oct;1(5):370-6. doi: 10.1111/j.1758-2229.2009.00074.x. Epub 2009 Sep 23. PMID: 23765889.
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RBC deformability and amino acid concentrations after hypo-osmotic challenge may reflect chronic cell hydration status in healthy young men.

Physiological reports

Stookey JD, Klein A, Hamer J, Chi C, Higa A, Ng V, Arieff A, Kuypers FA, Larkin S, Perrier E, Lang F.
PMID: 24303184
Physiol Rep. 2013 Oct;1(5):e00117. doi: 10.1002/phy2.117. Epub 2013 Oct 23.

Biomarkers of chronic cell hydration status are needed to determine whether chronic hyperosmotic stress increases chronic disease risk in population-representative samples. In vitro, cells adapt to chronic hyperosmotic stress by upregulating protein breakdown to counter the osmotic gradient with...

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Stookey JD, Klein A, Hamer J, et al. RBC deformability and amino acid concentrations after hypo-osmotic challenge may reflect chronic cell hydration status in healthy young men. Physiol Rep. 2013;1(5):e00117doi: 10.1002/phy2.117.
Stookey, J. D., Klein, A., Hamer, J., Chi, C., Higa, A., Ng, V., Arieff, A., Kuypers, F. A., Larkin, S., Perrier, E., & Lang, F. (2013). RBC deformability and amino acid concentrations after hypo-osmotic challenge may reflect chronic cell hydration status in healthy young men. Physiological reports, 1(5), e00117. https://doi.org/10.1002/phy2.117
Stookey, Jodi D, et al. "RBC deformability and amino acid concentrations after hypo-osmotic challenge may reflect chronic cell hydration status in healthy young men." Physiological reports vol. 1,5 (2013): e00117. doi: https://doi.org/10.1002/phy2.117
Stookey JD, Klein A, Hamer J, Chi C, Higa A, Ng V, Arieff A, Kuypers FA, Larkin S, Perrier E, Lang F. RBC deformability and amino acid concentrations after hypo-osmotic challenge may reflect chronic cell hydration status in healthy young men. Physiol Rep. 2013 Oct;1(5):e00117. doi: 10.1002/phy2.117. Epub 2013 Oct 23. PMID: 24303184; PMCID: PMC3841048.
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Secundum atrial septal defect is associated with reduced survival in adult men.

European heart journal

Kuijpers JM, van der Bom T, van Riel AC, Meijboom FJ, van Dijk AP, Pieper PG, Vliegen HW, Waskowsky WM, Oomen T, Zomer AC, Wagenaar LJ, Heesen WF, Roos-Hesselink JW, Zwinderman AH, Mulder BJ, Bouma BJ.
PMID: 25883174
Eur Heart J. 2015 Aug 14;36(31):2079-2086. doi: 10.1093/eurheartj/ehv097. Epub 2015 Apr 16.

AIMS: The identification of sex differences in the prognosis of adults with a secundum atrial septal defect (ASD2) could help tailor their clinical management, as it has in other cardiovascular diseases. We investigated whether disparity between the sexes exists...

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Kuijpers JM, van der Bom T, van Riel AC, et al. Secundum atrial septal defect is associated with reduced survival in adult men. Eur Heart J. 2015;36(31):2079-2086doi: 10.1093/eurheartj/ehv097.
Kuijpers, J. M., van der Bom, T., van Riel, A. C., Meijboom, F. J., van Dijk, A. P., Pieper, P. G., Vliegen, H. W., Waskowsky, W. M., Oomen, T., Zomer, A. C., Wagenaar, L. J., Heesen, W. F., Roos-Hesselink, J. W., Zwinderman, A. H., Mulder, B. J., & Bouma, B. J. (2015). Secundum atrial septal defect is associated with reduced survival in adult men. European heart journal, 36(31), 2079-2086. https://doi.org/10.1093/eurheartj/ehv097
Kuijpers, Joey M, et al. "Secundum atrial septal defect is associated with reduced survival in adult men." European heart journal vol. 36,31 (2015): 2079-2086. doi: https://doi.org/10.1093/eurheartj/ehv097
Kuijpers JM, van der Bom T, van Riel AC, Meijboom FJ, van Dijk AP, Pieper PG, Vliegen HW, Waskowsky WM, Oomen T, Zomer AC, Wagenaar LJ, Heesen WF, Roos-Hesselink JW, Zwinderman AH, Mulder BJ, Bouma BJ. Secundum atrial septal defect is associated with reduced survival in adult men. Eur Heart J. 2015 Aug 14;36(31):2079-2086. doi: 10.1093/eurheartj/ehv097. Epub 2015 Apr 16. PMID: 25883174.
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Retrograde axonal transport of horseradish peroxidase from spinal cord to brain stem cell groups in the cat.

Neuroscience letters

Kuypers HG, Maisky VA.
PMID: 19604744
Neurosci Lett. 1975 Jul;1(1):9-14. doi: 10.1016/0304-3940(75)90004-x.

No abstract available.

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Kuypers HG, Maisky VA. Retrograde axonal transport of horseradish peroxidase from spinal cord to brain stem cell groups in the cat. Neurosci Lett. 1975;1(1):9-14doi: 10.1016/0304-3940(75)90004-x.
Kuypers, H. G., & Maisky, V. A. (1975). Retrograde axonal transport of horseradish peroxidase from spinal cord to brain stem cell groups in the cat. Neuroscience letters, 1(1), 9-14. https://doi.org/10.1016/0304-3940(75)90004-x
Kuypers, H G, and Maisky, V A. "Retrograde axonal transport of horseradish peroxidase from spinal cord to brain stem cell groups in the cat." Neuroscience letters vol. 1,1 (1975): 9-14. doi: https://doi.org/10.1016/0304-3940(75)90004-x
Kuypers HG, Maisky VA. Retrograde axonal transport of horseradish peroxidase from spinal cord to brain stem cell groups in the cat. Neurosci Lett. 1975 Jul;1(1):9-14. doi: 10.1016/0304-3940(75)90004-x. PMID: 19604744.
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New Surgery for Acquired Heart Disease: I. The Results of Direct Vision Surgery for Mitral Insufficiency.

Canadian Medical Association journal

Bigelow WG, Kuypers PJ, Gunton RW.
PMID: 20326999
Can Med Assoc J. 1962 Jan 13;86(2):47-51.

No abstract available.

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Bigelow WG, Kuypers PJ, Gunton RW. New Surgery for Acquired Heart Disease: I. The Results of Direct Vision Surgery for Mitral Insufficiency. Can Med Assoc J. 1962;86(2):47-51
Bigelow, W. G., Kuypers, P. J., & Gunton, R. W. (1962). New Surgery for Acquired Heart Disease: I. The Results of Direct Vision Surgery for Mitral Insufficiency. Canadian Medical Association journal, 86(2), 47-51.
Bigelow, W G, et al. "New Surgery for Acquired Heart Disease: I. The Results of Direct Vision Surgery for Mitral Insufficiency." Canadian Medical Association journal vol. 86,2 (1962): 47-51.
Bigelow WG, Kuypers PJ, Gunton RW. New Surgery for Acquired Heart Disease: I. The Results of Direct Vision Surgery for Mitral Insufficiency. Can Med Assoc J. 1962 Jan 13;86(2):47-51. PMID: 20326999; PMCID: PMC1848767.
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Transcatheter device closure of atrial septal defects in patients aged 40 years and older.

Netherlands heart journal : monthly journal of the Netherlands Society of Cardiology and the Netherlands Heart Foundation

Altındag T, Roos-Hesselink JW, Cuypers JA, van Domburg R, de Jaegere PP, Meijboom FJ, Witsenburg M.
PMID: 21113378
Neth Heart J. 2010 Nov;18(11):537-42. doi: 10.1007/s12471-010-0830-1.

OBJECTIVE: To evaluate the safety and effect of transcatheter device closure in ostium secundum atrial septal defects (ASD II) in patients aged 40 years and older.METHODS: Retrospective single-centre study concerning 47 consecutive ASD transcatheter occlusion procedures performed between January...

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Altındag T, Roos-Hesselink JW, Cuypers JA, et al. Transcatheter device closure of atrial septal defects in patients aged 40 years and older. Neth Heart J. 2010;18(11):537-42doi: 10.1007/s12471-010-0830-1.
Altındag, T., Roos-Hesselink, J. W., Cuypers, J. A., van Domburg, R., de Jaegere, P. P., Meijboom, F. J., & Witsenburg, M. (2010). Transcatheter device closure of atrial septal defects in patients aged 40 years and older. Netherlands heart journal : monthly journal of the Netherlands Society of Cardiology and the Netherlands Heart Foundation, 18(11), 537-42. https://doi.org/10.1007/s12471-010-0830-1
Altındag, T, et al. "Transcatheter device closure of atrial septal defects in patients aged 40 years and older." Netherlands heart journal : monthly journal of the Netherlands Society of Cardiology and the Netherlands Heart Foundation vol. 18,11 (2010): 537-42. doi: https://doi.org/10.1007/s12471-010-0830-1
Altındag T, Roos-Hesselink JW, Cuypers JA, van Domburg R, de Jaegere PP, Meijboom FJ, Witsenburg M. Transcatheter device closure of atrial septal defects in patients aged 40 years and older. Neth Heart J. 2010 Nov;18(11):537-42. doi: 10.1007/s12471-010-0830-1. PMID: 21113378; PMCID: PMC2989491.
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Evidence of nitrification and denitrification in high and low microbial abundance sponges.

Marine biology

Schläppy ML, Schöttner SI, Lavik G, Kuypers MM, de Beer D, Hoffmann F.
PMID: 24391241
Mar Biol. 2010;157(3):593-602. doi: 10.1007/s00227-009-1344-5. Epub 2009 Nov 24.

Aerobic and anaerobic microbial key processes were quantified and compared to microbial numbers and morphological structure in Mediterranean sponges. Direct counts on histological sections stained with DAPI showed that sponges with high microbial abundances (HMA sponges) have a denser...

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Schläppy ML, Schöttner SI, Lavik G, et al. Evidence of nitrification and denitrification in high and low microbial abundance sponges. Mar Biol. 2009;157(3):593-602doi: 10.1007/s00227-009-1344-5.
Schläppy, M. L., Schöttner, S. I., Lavik, G., Kuypers, M. M., de Beer, D., & Hoffmann, F. (2010). Evidence of nitrification and denitrification in high and low microbial abundance sponges. Marine biology, 157(3), 593-602. https://doi.org/10.1007/s00227-009-1344-5
Schläppy, Marie-Lise, et al. "Evidence of nitrification and denitrification in high and low microbial abundance sponges." Marine biology vol. 157,3 (2010): 593-602. doi: https://doi.org/10.1007/s00227-009-1344-5
Schläppy ML, Schöttner SI, Lavik G, Kuypers MM, de Beer D, Hoffmann F. Evidence of nitrification and denitrification in high and low microbial abundance sponges. Mar Biol. 2010;157(3):593-602. doi: 10.1007/s00227-009-1344-5. Epub 2009 Nov 24. PMID: 24391241; PMCID: PMC3873014.
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Two cases of aorto-right atrial tunnel: clinical presentation, imaging and percutaneous closure.

Netherlands heart journal : monthly journal of the Netherlands Society of Cardiology and the Netherlands Heart Foundation

de Winter RJ, Blom NA, Straver B, Bouma BJ, Backx AP, Clur SA, Kuipers IM, Hoekstra F, Boekholdt SM, Groenink M, Koolbergen DR, Hazekamp MG, Mulder BJ.
PMID: 23100093
Neth Heart J. 2012 Dec;20(12):509-12. doi: 10.1007/s12471-012-0330-6.

Communication between the aortic sinus and a cardiac chamber is a rare anomaly that can be diagnosed in children and young adults. We describe two cases with a tunnel between the aortic sinus and right atrium, discuss diagnostic modalities,...

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de Winter RJ, Blom NA, Straver B, et al. Two cases of aorto-right atrial tunnel: clinical presentation, imaging and percutaneous closure. Neth Heart J. 2012;20(12):509-12doi: 10.1007/s12471-012-0330-6.
de Winter, R. J., Blom, N. A., Straver, B., Bouma, B. J., Backx, A. P., Clur, S. A., Kuipers, I. M., Hoekstra, F., Boekholdt, S. M., Groenink, M., Koolbergen, D. R., Hazekamp, M. G., & Mulder, B. J. (2012). Two cases of aorto-right atrial tunnel: clinical presentation, imaging and percutaneous closure. Netherlands heart journal : monthly journal of the Netherlands Society of Cardiology and the Netherlands Heart Foundation, 20(12), 509-12. https://doi.org/10.1007/s12471-012-0330-6
de Winter, R J, et al. "Two cases of aorto-right atrial tunnel: clinical presentation, imaging and percutaneous closure." Netherlands heart journal : monthly journal of the Netherlands Society of Cardiology and the Netherlands Heart Foundation vol. 20,12 (2012): 509-12. doi: https://doi.org/10.1007/s12471-012-0330-6
de Winter RJ, Blom NA, Straver B, Bouma BJ, Backx AP, Clur SA, Kuipers IM, Hoekstra F, Boekholdt SM, Groenink M, Koolbergen DR, Hazekamp MG, Mulder BJ. Two cases of aorto-right atrial tunnel: clinical presentation, imaging and percutaneous closure. Neth Heart J. 2012 Dec;20(12):509-12. doi: 10.1007/s12471-012-0330-6. PMID: 23100093; PMCID: PMC3515724.
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Direct Numerical Simulation of Fluid Flow and Mass Transfer in Particle Clusters.

Industrial & engineering chemistry research

Lu J, Peters EAJF, Kuipers JAM.
PMID: 29657359
Ind Eng Chem Res. 2018 Apr 04;57(13):4664-4679. doi: 10.1021/acs.iecr.8b00268. Epub 2018 Mar 15.

In this paper, an efficient ghost-cell based immersed boundary method is applied to perform direct numerical simulation (DNS) of mass transfer problems in particle clusters. To be specific, a nine-sphere cuboid cluster and a random-generated spherical cluster consisting of...

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Lu J, Peters EAJF, Kuipers JAM. Direct Numerical Simulation of Fluid Flow and Mass Transfer in Particle Clusters. Ind Eng Chem Res. 2018;57(13):4664-4679doi: 10.1021/acs.iecr.8b00268.
Lu, J., Peters, E. A. J. F., & Kuipers, J. A. M. (2018). Direct Numerical Simulation of Fluid Flow and Mass Transfer in Particle Clusters. Industrial & engineering chemistry research, 57(13), 4664-4679. https://doi.org/10.1021/acs.iecr.8b00268
Lu, Jiangtao, et al. "Direct Numerical Simulation of Fluid Flow and Mass Transfer in Particle Clusters." Industrial & engineering chemistry research vol. 57,13 (2018): 4664-4679. doi: https://doi.org/10.1021/acs.iecr.8b00268
Lu J, Peters EAJF, Kuipers JAM. Direct Numerical Simulation of Fluid Flow and Mass Transfer in Particle Clusters. Ind Eng Chem Res. 2018 Apr 04;57(13):4664-4679. doi: 10.1021/acs.iecr.8b00268. Epub 2018 Mar 15. PMID: 29657359; PMCID: PMC5894441.
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Magnetic resonance enterography findings of a gastrocolic fistula in Crohn's disease.

Quantitative imaging in medicine and surgery

van Munster SN, Stolk MF, Kuypers KC, Wiezer R, Bollen TL.
PMID: 27709089
Quant Imaging Med Surg. 2016 Aug;6(4):482-485. doi: 10.21037/qims.2016.08.06.

No abstract available.

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van Munster SN, Stolk MF, Kuypers KC, et al. Magnetic resonance enterography findings of a gastrocolic fistula in Crohn's disease. Quant Imaging Med Surg. 2016;6(4):482-485doi: 10.21037/qims.2016.08.06.
van Munster, S. N., Stolk, M. F., Kuypers, K. C., Wiezer, R., & Bollen, T. L. (2016). Magnetic resonance enterography findings of a gastrocolic fistula in Crohn's disease. Quantitative imaging in medicine and surgery, 6(4), 482-485. https://doi.org/10.21037/qims.2016.08.06
van Munster, Sanne N, et al. "Magnetic resonance enterography findings of a gastrocolic fistula in Crohn's disease." Quantitative imaging in medicine and surgery vol. 6,4 (2016): 482-485. doi: https://doi.org/10.21037/qims.2016.08.06
van Munster SN, Stolk MF, Kuypers KC, Wiezer R, Bollen TL. Magnetic resonance enterography findings of a gastrocolic fistula in Crohn's disease. Quant Imaging Med Surg. 2016 Aug;6(4):482-485. doi: 10.21037/qims.2016.08.06. PMID: 27709089; PMCID: PMC5009107.
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Direct Numerical Simulation of Reactive Fluid-Particle Systems Using an Immersed Boundary Method.

Industrial & engineering chemistry research

Lu J, Tan MD, Peters EAJF, Kuipers JAM.
PMID: 30487662
Ind Eng Chem Res. 2018 Nov 14;57(45):15565-15578. doi: 10.1021/acs.iecr.8b03158. Epub 2018 Oct 19.

In this paper, direct numerical simulation (DNS) is performed to study coupled heat and mass-transfer problems in fluid-particle systems. On the particles, an exothermic surface reaction takes place. The heat and mass transport is coupled through the particle temperature,...

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Lu J, Tan MD, Peters EAJF, et al. Direct Numerical Simulation of Reactive Fluid-Particle Systems Using an Immersed Boundary Method. Ind Eng Chem Res. 2018;57(45):15565-15578doi: 10.1021/acs.iecr.8b03158.
Lu, J., Tan, M. D., Peters, E. A. J. F., & Kuipers, J. A. M. (2018). Direct Numerical Simulation of Reactive Fluid-Particle Systems Using an Immersed Boundary Method. Industrial & engineering chemistry research, 57(45), 15565-15578. https://doi.org/10.1021/acs.iecr.8b03158
Lu, Jiangtao, et al. "Direct Numerical Simulation of Reactive Fluid-Particle Systems Using an Immersed Boundary Method." Industrial & engineering chemistry research vol. 57,45 (2018): 15565-15578. doi: https://doi.org/10.1021/acs.iecr.8b03158
Lu J, Tan MD, Peters EAJF, Kuipers JAM. Direct Numerical Simulation of Reactive Fluid-Particle Systems Using an Immersed Boundary Method. Ind Eng Chem Res. 2018 Nov 14;57(45):15565-15578. doi: 10.1021/acs.iecr.8b03158. Epub 2018 Oct 19. PMID: 30487662; PMCID: PMC6251562.
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Showing 1 to 12 of 129 entries