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Subject-specific, multiscale simulation of electrophysiology: a software pipeline for image-based models and application examples

pipeline programs

Macleod RS, Lew S.
GSID: KVIUQXuJsUkJ
RS Macleod, JG Stinstra, S Lew… - … of the Royal …, 2009 - royalsocietypublishing.org

… , to carry out all the steps of this pipeline. A major goal of our research and development is to … Moreover, by striking a suitable balance between the generality of the simulation pipeline and … programs that...

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Macleod, R. S., Stinstra, J. G., Lew, S., Whitaker, R. T., Swenson, D. J., Cole, M. J., ... & Johnson, C. R. (2009). Subject-specific, multiscale simulation of electrophysiology: a software pipeline for image-based models and application examples. Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences, 367(1896), 2293-2310.
Macleod, Robert S., et al. "Subject-specific, multiscale simulation of electrophysiology: a software pipeline for image-based models and application examples." Philosophical Transactions of the Royal Society A: Mathematical, Physical and Engineering Sciences 367.1896 (2009): 2293-2310.
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Overgeneralization: an important but non-homogeneous construct.

The British journal of clinical psychology

MacLeod AK, Williams JM.
PMID: 2289083
Br J Clin Psychol. 1990 Nov;29(4):443-4. doi: 10.1111/j.2044-8260.1990.tb00911.x.

Two self-report scales--the Cognitions Questionnaire (Fennell & Campbell, 1984) and the Attitudes to Self Scale (Carver & Ganellen, 1983)--which attempt to measure overgeneralization in depression are described. In line with previous research, both measures correlated with levels of depression,...

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MacLeod AK, Williams JM. Overgeneralization: an important but non-homogeneous construct. Br J Clin Psychol. 1990;29(4):443-4doi: 10.1111/j.2044-8260.1990.tb00911.x.
MacLeod, A. K., & Williams, J. M. (1990). Overgeneralization: an important but non-homogeneous construct. The British journal of clinical psychology, 29(4), 443-4. https://doi.org/10.1111/j.2044-8260.1990.tb00911.x
MacLeod, A K, and Williams, J M. "Overgeneralization: an important but non-homogeneous construct." The British journal of clinical psychology vol. 29,4 (1990): 443-4. doi: https://doi.org/10.1111/j.2044-8260.1990.tb00911.x
MacLeod AK, Williams JM. Overgeneralization: an important but non-homogeneous construct. Br J Clin Psychol. 1990 Nov;29(4):443-4. doi: 10.1111/j.2044-8260.1990.tb00911.x. PMID: 2289083.
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Moderate levels of chronic mood disturbance are associated with increased cognitive complexity about the self.

The British journal of medical psychology

MacLeod AK, Williams JM.
PMID: 1883758
Br J Med Psychol. 1991 Jun;64:179-88. doi: 10.1111/j.2044-8341.1991.tb01655.x.

Despite its status as a general assumption, the idea that mood disturbance is associated with reduced complexity of cognitive representations has received little in the way of empirical support. It is suggested that this may arise because of a...

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MacLeod AK, Williams JM. Moderate levels of chronic mood disturbance are associated with increased cognitive complexity about the self. Br J Med Psychol. 1991;64:179-88doi: 10.1111/j.2044-8341.1991.tb01655.x.
MacLeod, A. K., & Williams, J. M. (1991). Moderate levels of chronic mood disturbance are associated with increased cognitive complexity about the self. The British journal of medical psychology, 64179-88. https://doi.org/10.1111/j.2044-8341.1991.tb01655.x
MacLeod, A K, and Williams, J M. "Moderate levels of chronic mood disturbance are associated with increased cognitive complexity about the self." The British journal of medical psychology vol. 64 (1991): 179-88. doi: https://doi.org/10.1111/j.2044-8341.1991.tb01655.x
MacLeod AK, Williams JM. Moderate levels of chronic mood disturbance are associated with increased cognitive complexity about the self. Br J Med Psychol. 1991 Jun;64:179-88. doi: 10.1111/j.2044-8341.1991.tb01655.x. PMID: 1883758.
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Fluctuations in recall across successive test trials.

Memory & cognition

Nelson TO, Macleod CM.
PMID: 24203739
Mem Cognit. 1974 Jul;2(4):687-90. doi: 10.3758/BF03198140.

The purpose of the experiment was to determine whether item fluctuation (intertrial forgetting and spontaneous recovery) depends upon the time allowed for recall and/or the demand characteristics of the experimental situation (manipulated via instructions to S). One hundred. and...

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Nelson TO, Macleod CM. Fluctuations in recall across successive test trials. Mem Cognit. 1974;2(4):687-90doi: 10.3758/BF03198140.
Nelson, T. O., & Macleod, C. M. (1974). Fluctuations in recall across successive test trials. Memory & cognition, 2(4), 687-90. https://doi.org/10.3758/BF03198140
Nelson, T O, and Macleod, C M. "Fluctuations in recall across successive test trials." Memory & cognition vol. 2,4 (1974): 687-90. doi: https://doi.org/10.3758/BF03198140
Nelson TO, Macleod CM. Fluctuations in recall across successive test trials. Mem Cognit. 1974 Jul;2(4):687-90. doi: 10.3758/BF03198140. PMID: 24203739.
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The Consortium for Electrocardiographic Imaging.

Computing in cardiology

Coll-Font J, Dhamala J, Potyagaylo D, Schulze WH, Tate JD, Guillem MS, van Dam P, Dossel O, Brooks DH, Macleod RS.
PMID: 28451592
Comput Cardiol (2010). 2016 Sep;43:325-328. Epub 2017 Mar 02.

Electrocardiographic imaging (ECGI) has recently gained attention as a viable diagnostic tool for reconstructing cardiac electrical activity in normal hearts as well as in cardiac arrhythmias. However, progress has been limited by the lack of both standards and unbiased...

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Coll-Font J, Dhamala J, Potyagaylo D, et al. The Consortium for Electrocardiographic Imaging. Comput Cardiol (2010). 2017;43:325-328
Coll-Font, J., Dhamala, J., Potyagaylo, D., Schulze, W. H., Tate, J. D., Guillem, M. S., van Dam, P., Dossel, O., Brooks, D. H., & Macleod, R. S. (2016). The Consortium for Electrocardiographic Imaging. Computing in cardiology, 43325-328.
Coll-Font, Jaume, et al. "The Consortium for Electrocardiographic Imaging." Computing in cardiology vol. 43 (2016): 325-328.
Coll-Font J, Dhamala J, Potyagaylo D, Schulze WH, Tate JD, Guillem MS, van Dam P, Dossel O, Brooks DH, Macleod RS. The Consortium for Electrocardiographic Imaging. Comput Cardiol (2010). 2016 Sep;43:325-328. Epub 2017 Mar 02. PMID: 28451592; PMCID: PMC5404701.
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Cancer Risks among Welders and Occasional Welders in a National Population-Based Cohort Study: Canadian Census Health and Environmental Cohort.

Safety and health at work

MacLeod JS, Harris MA, Tjepkema M, Peters PA, Demers PA.
PMID: 28951802
Saf Health Work. 2017 Sep;8(3):258-266. doi: 10.1016/j.shaw.2016.12.001. Epub 2017 Jan 12.

BACKGROUND: Welders are exposed to many known and suspected carcinogens. An excess lung cancer risk among welders is well established, but whether this is attributable to welding fumes is unclear. Excess risks of other cancers have been suggested, but...

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MacLeod JS, Harris MA, Tjepkema M, et al. Cancer Risks among Welders and Occasional Welders in a National Population-Based Cohort Study: Canadian Census Health and Environmental Cohort. Saf Health Work. 2017;8(3):258-266doi: 10.1016/j.shaw.2016.12.001.
MacLeod, J. S., Harris, M. A., Tjepkema, M., Peters, P. A., & Demers, P. A. (2017). Cancer Risks among Welders and Occasional Welders in a National Population-Based Cohort Study: Canadian Census Health and Environmental Cohort. Safety and health at work, 8(3), 258-266. https://doi.org/10.1016/j.shaw.2016.12.001
MacLeod, Jill S, et al. "Cancer Risks among Welders and Occasional Welders in a National Population-Based Cohort Study: Canadian Census Health and Environmental Cohort." Safety and health at work vol. 8,3 (2017): 258-266. doi: https://doi.org/10.1016/j.shaw.2016.12.001
MacLeod JS, Harris MA, Tjepkema M, Peters PA, Demers PA. Cancer Risks among Welders and Occasional Welders in a National Population-Based Cohort Study: Canadian Census Health and Environmental Cohort. Saf Health Work. 2017 Sep;8(3):258-266. doi: 10.1016/j.shaw.2016.12.001. Epub 2017 Jan 12. PMID: 28951802; PMCID: PMC5605892.
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Broadband standoff detection of large molecules by mid-infrared active coherent laser spectrometry.

Optics express

Macleod NA, Molero F, Weidmann D.
PMID: 25835851
Opt Express. 2015 Jan 26;23(2):912-28. doi: 10.1364/OE.23.000912.

A widely tunable active coherent laser spectrometer (ACLaS) has been demonstrated for standoff detection of broadband absorbers in the 1280 to 1318 cm-1 spectral region using an external cavity quantum cascade laser as a mid-infrared source. The broad tuning...

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Macleod NA, Molero F, Weidmann D. Broadband standoff detection of large molecules by mid-infrared active coherent laser spectrometry. Opt Express. 2015;23(2):912-28doi: 10.1364/OE.23.000912.
Macleod, N. A., Molero, F., & Weidmann, D. (2015). Broadband standoff detection of large molecules by mid-infrared active coherent laser spectrometry. Optics express, 23(2), 912-28. https://doi.org/10.1364/OE.23.000912
Macleod, Neil A, et al. "Broadband standoff detection of large molecules by mid-infrared active coherent laser spectrometry." Optics express vol. 23,2 (2015): 912-28. doi: https://doi.org/10.1364/OE.23.000912
Macleod NA, Molero F, Weidmann D. Broadband standoff detection of large molecules by mid-infrared active coherent laser spectrometry. Opt Express. 2015 Jan 26;23(2):912-28. doi: 10.1364/OE.23.000912. PMID: 25835851.
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Clinical management of pain in advanced lung cancer.

Clinical Medicine Insights. Oncology

Simmons CP, Macleod N, Laird BJ.
PMID: 23115483
Clin Med Insights Oncol. 2012;6:331-46. doi: 10.4137/CMO.S8360. Epub 2012 Oct 08.

Lung cancer is the most common cancer in the world and pain is its most common symptom. Pain can be brought about by several different causes including local effects of the tumor, regional or distant spread of the tumor,...

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Simmons CP, Macleod N, Laird BJ. Clinical management of pain in advanced lung cancer. Clin Med Insights Oncol. 2012;6:331-46doi: 10.4137/CMO.S8360.
Simmons, C. P., Macleod, N., & Laird, B. J. (2012). Clinical management of pain in advanced lung cancer. Clinical Medicine Insights. Oncology, 6331-46. https://doi.org/10.4137/CMO.S8360
Simmons, Claribel P L, et al. "Clinical management of pain in advanced lung cancer." Clinical Medicine Insights. Oncology vol. 6 (2012): 331-46. doi: https://doi.org/10.4137/CMO.S8360
Simmons CP, Macleod N, Laird BJ. Clinical management of pain in advanced lung cancer. Clin Med Insights Oncol. 2012;6:331-46. doi: 10.4137/CMO.S8360. Epub 2012 Oct 08. PMID: 23115483; PMCID: PMC3474460.
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The plight of paediatric drug therapy.

Paediatrics & child health

Macleod S.
PMID: 23115487
Paediatr Child Health. 2011 Nov;16(9):529-31. doi: 10.1093/pch/16.9.529.

No abstract available.

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Macleod S. The plight of paediatric drug therapy. Paediatr Child Health. 2011;16(9):529-31doi: 10.1093/pch/16.9.529.
Macleod, S. (2011). The plight of paediatric drug therapy. Paediatrics & child health, 16(9), 529-31. https://doi.org/10.1093/pch/16.9.529
Macleod, Stuart. "The plight of paediatric drug therapy." Paediatrics & child health vol. 16,9 (2011): 529-31. doi: https://doi.org/10.1093/pch/16.9.529
Macleod S. The plight of paediatric drug therapy. Paediatr Child Health. 2011 Nov;16(9):529-31. doi: 10.1093/pch/16.9.529. PMID: 23115487; PMCID: PMC3223883.
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Half-sandwich scandium boryl complexes bearing a silylene-linked cyclopentadienyl-amido ligand.

Dalton transactions (Cambridge, England : 2003)

Wang B, Nishiura M, Cheng J, Hou Z, Keeley NB, Macleod CK.
PMID: 25050696
Dalton Trans. 2014 Oct 14;43(38):14215-8. doi: 10.1039/c4dt01725k.

A boryl scandium complex supported by the silylene-linked cyclopentadienyl-amido ligand was synthesized for the first time, which on reaction with nitric oxide (NO) afforded a novel scandium boryldiazeniumdiolate [ON(boryl)NO] complex.

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Wang B, Nishiura M, Cheng J, et al. Half-sandwich scandium boryl complexes bearing a silylene-linked cyclopentadienyl-amido ligand. Dalton Trans. 2014;43(38):14215-8doi: 10.1039/c4dt01725k.
Wang, B., Nishiura, M., Cheng, J., Hou, Z., Keeley, N. B., & Macleod, C. K. (2014). Half-sandwich scandium boryl complexes bearing a silylene-linked cyclopentadienyl-amido ligand. Dalton transactions (Cambridge, England : 2003), 43(38), 14215-8. https://doi.org/10.1039/c4dt01725k
Wang, Baoli, et al. "Half-sandwich scandium boryl complexes bearing a silylene-linked cyclopentadienyl-amido ligand." Dalton transactions (Cambridge, England : 2003) vol. 43,38 (2014): 14215-8. doi: https://doi.org/10.1039/c4dt01725k
Wang B, Nishiura M, Cheng J, Hou Z, Keeley NB, Macleod CK. Half-sandwich scandium boryl complexes bearing a silylene-linked cyclopentadienyl-amido ligand. Dalton Trans. 2014 Oct 14;43(38):14215-8. doi: 10.1039/c4dt01725k. PMID: 25050696.
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Computational Shape Models Characterize Shape Change of the Left Atrium in Atrial Fibrillation.

Clinical Medicine Insights. Cardiology

Cates J, Bieging E, Morris A, Gardner G, Akoum N, Kholmovski E, Marrouche N, McGann C, MacLeod RS.
PMID: 26380559
Clin Med Insights Cardiol. 2015 Aug 26;8:99-109. doi: 10.4137/CMC.S15710. eCollection 2014.

Shape change of the left atrium (LA) and LA appendage in atrial fibrillation (AF) patients is hypothesized to be linked to AF pathology and to play a role in thrombogenesis; however, many aspects of shape variation in the heart...

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Cates J, Bieging E, Morris A, et al. Computational Shape Models Characterize Shape Change of the Left Atrium in Atrial Fibrillation. Clin Med Insights Cardiol. 2015;8:99-109doi: 10.4137/CMC.S15710.
Cates, J., Bieging, E., Morris, A., Gardner, G., Akoum, N., Kholmovski, E., Marrouche, N., McGann, C., & MacLeod, R. S. (2014). Computational Shape Models Characterize Shape Change of the Left Atrium in Atrial Fibrillation. Clinical Medicine Insights. Cardiology, 899-109. https://doi.org/10.4137/CMC.S15710
Cates, Joshua, et al. "Computational Shape Models Characterize Shape Change of the Left Atrium in Atrial Fibrillation." Clinical Medicine Insights. Cardiology vol. 8 (2014): 99-109. doi: https://doi.org/10.4137/CMC.S15710
Cates J, Bieging E, Morris A, Gardner G, Akoum N, Kholmovski E, Marrouche N, McGann C, MacLeod RS. Computational Shape Models Characterize Shape Change of the Left Atrium in Atrial Fibrillation. Clin Med Insights Cardiol. 2015 Aug 26;8:99-109. doi: 10.4137/CMC.S15710. eCollection 2014. PMID: 26380559; PMCID: PMC4559307.
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A Kalman Filtering Perspective for Multiatlas Segmentation.

SIAM journal on imaging sciences

Gao Y, Zhu L, Cates J, MacLeod RS, Bouix S, Tannenbaum A.
PMID: 26807162
SIAM J Imaging Sci. 2015;8(2):1007-1029. doi: 10.1137/130933423. Epub 2015 Apr 30.

In multiatlas segmentation, one typically registers several atlases to the novel image, and their respective segmented label images are transformed and fused to form the final segmentation. In this work, we provide a new dynamical system perspective for multiatlas...

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Gao Y, Zhu L, Cates J, et al. A Kalman Filtering Perspective for Multiatlas Segmentation. SIAM J Imaging Sci. 2015;8(2):1007-1029doi: 10.1137/130933423.
Gao, Y., Zhu, L., Cates, J., MacLeod, R. S., Bouix, S., & Tannenbaum, A. (2015). A Kalman Filtering Perspective for Multiatlas Segmentation. SIAM journal on imaging sciences, 8(2), 1007-1029. https://doi.org/10.1137/130933423
Gao, Yi, et al. "A Kalman Filtering Perspective for Multiatlas Segmentation." SIAM journal on imaging sciences vol. 8,2 (2015): 1007-1029. doi: https://doi.org/10.1137/130933423
Gao Y, Zhu L, Cates J, MacLeod RS, Bouix S, Tannenbaum A. A Kalman Filtering Perspective for Multiatlas Segmentation. SIAM J Imaging Sci. 2015;8(2):1007-1029. doi: 10.1137/130933423. Epub 2015 Apr 30. PMID: 26807162; PMCID: PMC4722821.
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Showing 1 to 12 of 316 entries