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Coarse-Graining the Accessible Surface and the Electrostatics of Proteins for Protein-Protein Interactions.

Journal of chemical theory and computation

Pizzitutti F, Marchi M, Borgis D.
PMID: 26627629
J Chem Theory Comput. 2007 Sep;3(5):1867-76. doi: 10.1021/ct700121n.

This study is concerned with the development and test of a coarse-grained representation specifically constructed for proteins and peptides, where each amino acid of the sequence is represented by a charged dipolar sphere. The model was parametrized from the...

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Pizzitutti F, Marchi M, Borgis D. Coarse-Graining the Accessible Surface and the Electrostatics of Proteins for Protein-Protein Interactions. J Chem Theory Comput. 2007;3(5):1867-76doi: 10.1021/ct700121n.
Pizzitutti, F., Marchi, M., & Borgis, D. (2007). Coarse-Graining the Accessible Surface and the Electrostatics of Proteins for Protein-Protein Interactions. Journal of chemical theory and computation, 3(5), 1867-76. https://doi.org/10.1021/ct700121n
Pizzitutti, Francesco, et al. "Coarse-Graining the Accessible Surface and the Electrostatics of Proteins for Protein-Protein Interactions." Journal of chemical theory and computation vol. 3,5 (2007): 1867-76. doi: https://doi.org/10.1021/ct700121n
Pizzitutti F, Marchi M, Borgis D. Coarse-Graining the Accessible Surface and the Electrostatics of Proteins for Protein-Protein Interactions. J Chem Theory Comput. 2007 Sep;3(5):1867-76. doi: 10.1021/ct700121n. PMID: 26627629.
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Erratum to: Reduced health-related quality of life among Japanese college students with visual impairment.

BioPsychoSocial medicine

Iguchi M.
PMID: 27051462
Biopsychosoc Med. 2016 Apr 05;10:9. doi: 10.1186/s13030-016-0061-9. eCollection 2016.

[This corrects the article DOI: 10.1186/s13030-015-0045-1.].

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Iguchi M. Erratum to: Reduced health-related quality of life among Japanese college students with visual impairment. Biopsychosoc Med. 2016;10:9doi: 10.1186/s13030-016-0061-9.
Iguchi, M. (2016). Erratum to: Reduced health-related quality of life among Japanese college students with visual impairment. BioPsychoSocial medicine, 109. https://doi.org/10.1186/s13030-016-0061-9
Iguchi, Masaki. "Erratum to: Reduced health-related quality of life among Japanese college students with visual impairment." BioPsychoSocial medicine vol. 10 (2016): 9. doi: https://doi.org/10.1186/s13030-016-0061-9
Iguchi M. Erratum to: Reduced health-related quality of life among Japanese college students with visual impairment. Biopsychosoc Med. 2016 Apr 05;10:9. doi: 10.1186/s13030-016-0061-9. eCollection 2016. PMID: 27051462; PMCID: PMC4820993.
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[No title available]

Frontiers in endocrinology

Nishimura Y, Mabuchi K, Takano A, Hara Y, Negishi H, Morimoto K, Ueno T, Uchiyama S, Takamata A.
PMID: 29097993
Front Endocrinol (Lausanne). 2017 Oct 19;8:281. doi: 10.3389/fendo.2017.00281. eCollection 2017.

Chronic estrogen replacement in ovariectomized rats attenuates food intake and enhances c-Fos expression in the suprachiasmatic nucleus (SCN), specifically during the light phase.

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Nishimura Y, Mabuchi K, Takano A, et al. . Front Endocrinol (Lausanne). 2017;8:281doi: 10.3389/fendo.2017.00281.
Nishimura, Y., Mabuchi, K., Takano, A., Hara, Y., Negishi, H., Morimoto, K., Ueno, T., Uchiyama, S., & Takamata, A. (2017). . Frontiers in endocrinology, 8281. https://doi.org/10.3389/fendo.2017.00281
Nishimura, Yuri, et al. "." Frontiers in endocrinology vol. 8 (2017): 281. doi: https://doi.org/10.3389/fendo.2017.00281
Nishimura Y, Mabuchi K, Takano A, Hara Y, Negishi H, Morimoto K, Ueno T, Uchiyama S, Takamata A. . Front Endocrinol (Lausanne). 2017 Oct 19;8:281. doi: 10.3389/fendo.2017.00281. eCollection 2017. PMID: 29097993; PMCID: PMC5653693.
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Molecular Dynamics Simulations of a Characteristic DPC Micelle in Water.

Journal of chemical theory and computation

Abel S, Dupradeau FY, Marchi M.
PMID: 26605618
J Chem Theory Comput. 2012 Nov 13;8(11):4610-23. doi: 10.1021/ct3003207. Epub 2012 Sep 11.

We present the first comparative molecular dynamics investigation for a dodecylphosphocholine (DPC) micelle performed in condensed phase using the CHARMM36, GROMOS53A6, GROMOS54A7, and GROMOS53A6/Berger force fields and a set of parameters developed anew. Our potential consists of newly derived...

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Abel S, Dupradeau FY, Marchi M. Molecular Dynamics Simulations of a Characteristic DPC Micelle in Water. J Chem Theory Comput. 2012;8(11):4610-23doi: 10.1021/ct3003207.
Abel, S., Dupradeau, F. Y., & Marchi, M. (2012). Molecular Dynamics Simulations of a Characteristic DPC Micelle in Water. Journal of chemical theory and computation, 8(11), 4610-23. https://doi.org/10.1021/ct3003207
Abel, Stéphane, et al. "Molecular Dynamics Simulations of a Characteristic DPC Micelle in Water." Journal of chemical theory and computation vol. 8,11 (2012): 4610-23. doi: https://doi.org/10.1021/ct3003207
Abel S, Dupradeau FY, Marchi M. Molecular Dynamics Simulations of a Characteristic DPC Micelle in Water. J Chem Theory Comput. 2012 Nov 13;8(11):4610-23. doi: 10.1021/ct3003207. Epub 2012 Sep 11. PMID: 26605618.
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Facility for assessing spectral normal emittance of solid materials at high temperature.

Applied optics

Mercatelli L, Meucci M, Sani E.
PMID: 26479806
Appl Opt. 2015 Oct 10;54(29):8700-5. doi: 10.1364/AO.54.008700.

Spectral emittance is a key topic in the study of new compositions, depositions, and mechanical machining of materials for solar absorption and for renewable energies in general. The present work reports on the realization and testing of a new...

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Mercatelli L, Meucci M, Sani E. Facility for assessing spectral normal emittance of solid materials at high temperature. Appl Opt. 2015;54(29):8700-5doi: 10.1364/AO.54.008700.
Mercatelli, L., Meucci, M., & Sani, E. (2015). Facility for assessing spectral normal emittance of solid materials at high temperature. Applied optics, 54(29), 8700-5. https://doi.org/10.1364/AO.54.008700
Mercatelli, Luca, et al. "Facility for assessing spectral normal emittance of solid materials at high temperature." Applied optics vol. 54,29 (2015): 8700-5. doi: https://doi.org/10.1364/AO.54.008700
Mercatelli L, Meucci M, Sani E. Facility for assessing spectral normal emittance of solid materials at high temperature. Appl Opt. 2015 Oct 10;54(29):8700-5. doi: 10.1364/AO.54.008700. PMID: 26479806.
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Comparison of clinical utilities of the platelet count and platelet-lymphocyte ratio for predicting survival in patients with cervical cancer: a single institutional study and literature review.

Oncotarget

Kozasa K, Mabuchi S, Komura N, Yokoi E, Hiromasa K, Sasano T, Kawano M, Matsumoto Y, Kobayashi E, Kimura T.
PMID: 28903428
Oncotarget. 2017 Jul 25;8(33):55394-55404. doi: 10.18632/oncotarget.19560. eCollection 2017 Aug 15.

OBJECTIVE: To compare the clinical utilities of the platelet count and platelet-lymphocyte ratio (PLR) for predicting survival in patients with cervical cancer.RESULTS: Multivariate analyses demonstrated that thrombocytosis and elevated PLR were found to be independent prognostic factors for progression-free...

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Kozasa K, Mabuchi S, Komura N, et al. Comparison of clinical utilities of the platelet count and platelet-lymphocyte ratio for predicting survival in patients with cervical cancer: a single institutional study and literature review. Oncotarget. 2017;8(33):55394-55404doi: 10.18632/oncotarget.19560.
Kozasa, K., Mabuchi, S., Komura, N., Yokoi, E., Hiromasa, K., Sasano, T., Kawano, M., Matsumoto, Y., Kobayashi, E., & Kimura, T. (2017). Comparison of clinical utilities of the platelet count and platelet-lymphocyte ratio for predicting survival in patients with cervical cancer: a single institutional study and literature review. Oncotarget, 8(33), 55394-55404. https://doi.org/10.18632/oncotarget.19560
Kozasa, Katsumi, et al. "Comparison of clinical utilities of the platelet count and platelet-lymphocyte ratio for predicting survival in patients with cervical cancer: a single institutional study and literature review." Oncotarget vol. 8,33 (2017): 55394-55404. doi: https://doi.org/10.18632/oncotarget.19560
Kozasa K, Mabuchi S, Komura N, Yokoi E, Hiromasa K, Sasano T, Kawano M, Matsumoto Y, Kobayashi E, Kimura T. Comparison of clinical utilities of the platelet count and platelet-lymphocyte ratio for predicting survival in patients with cervical cancer: a single institutional study and literature review. Oncotarget. 2017 Jul 25;8(33):55394-55404. doi: 10.18632/oncotarget.19560. eCollection 2017 Aug 15. PMID: 28903428; PMCID: PMC5589667.
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Spontaneous remission of epstein-barr virus-positive diffuse large B-cell lymphoma of the elderly.

Case reports in oncology

Mizuno T, Ishigaki M, Nakajima K, Matsue T, Fukushima M, Minato H, Nojima N, Atsushi S, Ishigami K, Atsumi H, Ito T, Iguchi M, Usuda D, Okamura H, Urashima S, Asano M, Fukuda A, Izumi Y, Takekoshi N, Kanda T.
PMID: 23741222
Case Rep Oncol. 2013 May 15;6(2):269-74. doi: 10.1159/000345572. Print 2013 May.

A 94-year-old female patient presented with anorexia and left axillar lymphadenopathy on admission. Her past history was angina pectoris at 83 years of age and total gastrectomy due to gastric cancer at 87 years. The family history revealed that...

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Mizuno T, Ishigaki M, Nakajima K, et al. Spontaneous remission of epstein-barr virus-positive diffuse large B-cell lymphoma of the elderly. Case Rep Oncol. 2013;6(2):269-74doi: 10.1159/000345572.
Mizuno, T., Ishigaki, M., Nakajima, K., Matsue, T., Fukushima, M., Minato, H., Nojima, N., Atsushi, S., Ishigami, K., Atsumi, H., Ito, T., Iguchi, M., Usuda, D., Okamura, H., Urashima, S., Asano, M., Fukuda, A., Izumi, Y., Takekoshi, N., & Kanda, T. (2013). Spontaneous remission of epstein-barr virus-positive diffuse large B-cell lymphoma of the elderly. Case reports in oncology, 6(2), 269-74. https://doi.org/10.1159/000345572
Mizuno, T, et al. "Spontaneous remission of epstein-barr virus-positive diffuse large B-cell lymphoma of the elderly." Case reports in oncology vol. 6,2 (2013): 269-74. doi: https://doi.org/10.1159/000345572
Mizuno T, Ishigaki M, Nakajima K, Matsue T, Fukushima M, Minato H, Nojima N, Atsushi S, Ishigami K, Atsumi H, Ito T, Iguchi M, Usuda D, Okamura H, Urashima S, Asano M, Fukuda A, Izumi Y, Takekoshi N, Kanda T. Spontaneous remission of epstein-barr virus-positive diffuse large B-cell lymphoma of the elderly. Case Rep Oncol. 2013 May 15;6(2):269-74. doi: 10.1159/000345572. Print 2013 May. PMID: 23741222; PMCID: PMC3670634.
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A case of polyarteritis nodosa associated with cytomegalovirus infection.

Case reports in rheumatology

Kouchi M, Sato S, Kamono M, Taoda A, Iijima K, Mizuma A, Kitao R, Mihara M, Ozawa H, Ishihara T, Takagi A, Suzuki Y.
PMID: 25478279
Case Rep Rheumatol. 2014;2014:604874. doi: 10.1155/2014/604874. Epub 2014 Nov 12.

A 77-year-old man suffering from prolonged fever of unknown origin and bilateral leg edema was referred to our hospital. On physical examination, he had fever, general fatigue, bilateral lower leg edema, and muscle weakness of the right upper extremity...

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Kouchi M, Sato S, Kamono M, et al. A case of polyarteritis nodosa associated with cytomegalovirus infection. Case Rep Rheumatol. 2014;2014:604874doi: 10.1155/2014/604874.
Kouchi, M., Sato, S., Kamono, M., Taoda, A., Iijima, K., Mizuma, A., Kitao, R., Mihara, M., Ozawa, H., Ishihara, T., Takagi, A., & Suzuki, Y. (2014). A case of polyarteritis nodosa associated with cytomegalovirus infection. Case reports in rheumatology, 2014604874. https://doi.org/10.1155/2014/604874
Kouchi, Maiko, et al. "A case of polyarteritis nodosa associated with cytomegalovirus infection." Case reports in rheumatology vol. 2014 (2014): 604874. doi: https://doi.org/10.1155/2014/604874
Kouchi M, Sato S, Kamono M, Taoda A, Iijima K, Mizuma A, Kitao R, Mihara M, Ozawa H, Ishihara T, Takagi A, Suzuki Y. A case of polyarteritis nodosa associated with cytomegalovirus infection. Case Rep Rheumatol. 2014;2014:604874. doi: 10.1155/2014/604874. Epub 2014 Nov 12. PMID: 25478279; PMCID: PMC4244972.
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[Equipment and instruments used in the diagnosis and treatment of coronary disease].

Nihon rinsho. Japanese journal of clinical medicine

Mabuchi K, Chinzei T, Abe Y, Imanishi K, Atsumi K.
PMID: 3509228
Nihon Rinsho. 1987 Dec;1139-55.

No abstract available.

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Mabuchi K, Chinzei T, Abe Y, et al. [Equipment and instruments used in the diagnosis and treatment of coronary disease]. Nihon Rinsho. 1987;1139-55
Mabuchi, K., Chinzei, T., Abe, Y., Imanishi, K., & Atsumi, K. (1987). [Equipment and instruments used in the diagnosis and treatment of coronary disease]. Nihon rinsho. Japanese journal of clinical medicine, 1139-55.
Mabuchi, K, et al. "[Equipment and instruments used in the diagnosis and treatment of coronary disease]." Nihon rinsho. Japanese journal of clinical medicine vol. (1987): 1139-55.
Mabuchi K, Chinzei T, Abe Y, Imanishi K, Atsumi K. [Equipment and instruments used in the diagnosis and treatment of coronary disease]. Nihon Rinsho. 1987 Dec;1139-55. Japanese. PMID: 3509228.
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Crystallization in low-energy deposition of titanium ions.

Colloids and surfaces. B, Biointerfaces

Kiuchi M, Matsumoto T, Yoshikawa T, Goto S, Ensinger W.
PMID: 10967501
Colloids Surf B Biointerfaces. 2000 Dec 30;19(3):269-273. doi: 10.1016/s0927-7765(00)00165-x.

To investigate crystallization in the ion beam deposition process, titanium ions were deposited on silicon wafers at 105 and 55 eV. As titanium is an active metal, titanium compounds are formed by absorbing backfilled or residual gas. At energy...

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Kiuchi M, Matsumoto T, Yoshikawa T, et al. Crystallization in low-energy deposition of titanium ions. Colloids Surf B Biointerfaces. 2000;19(3):269-273doi: 10.1016/s0927-7765(00)00165-x.
Kiuchi, M., Matsumoto, T., Yoshikawa, T., Goto, S., & Ensinger, W. (2000). Crystallization in low-energy deposition of titanium ions. Colloids and surfaces. B, Biointerfaces, 19(3), 269-273. https://doi.org/10.1016/s0927-7765(00)00165-x
Kiuchi, et al. "Crystallization in low-energy deposition of titanium ions." Colloids and surfaces. B, Biointerfaces vol. 19,3 (2000): 269-273. doi: https://doi.org/10.1016/s0927-7765(00)00165-x
Kiuchi M, Matsumoto T, Yoshikawa T, Goto S, Ensinger W. Crystallization in low-energy deposition of titanium ions. Colloids Surf B Biointerfaces. 2000 Dec 30;19(3):269-273. doi: 10.1016/s0927-7765(00)00165-x. PMID: 10967501.
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Quantum-classical transition in nonlinear dynamical systems.

Physical review letters

Habib S, Jacobs K, Mabuchi H, Ryne R, Shizume K, Sundaram B.
PMID: 11801095
Phys Rev Lett. 2002 Jan 28;88(4):040402. doi: 10.1103/PhysRevLett.88.040402. Epub 2002 Jan 08.

Viewed as approximations to quantum mechanics, classical evolutions can violate the positive semidefiniteness of the density matrix. The nature of the violation suggests a classification of dynamical systems based on classical-quantum correspondence; we show that this can be used...

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Habib S, Jacobs K, Mabuchi H, et al. Quantum-classical transition in nonlinear dynamical systems. Phys Rev Lett. 2002;88(4):040402doi: 10.1103/PhysRevLett.88.040402.
Habib, S., Jacobs, K., Mabuchi, H., Ryne, R., Shizume, K., & Sundaram, B. (2002). Quantum-classical transition in nonlinear dynamical systems. Physical review letters, 88(4), 040402. https://doi.org/10.1103/PhysRevLett.88.040402
Habib, Salman, et al. "Quantum-classical transition in nonlinear dynamical systems." Physical review letters vol. 88,4 (2002): 040402. doi: https://doi.org/10.1103/PhysRevLett.88.040402
Habib S, Jacobs K, Mabuchi H, Ryne R, Shizume K, Sundaram B. Quantum-classical transition in nonlinear dynamical systems. Phys Rev Lett. 2002 Jan 28;88(4):040402. doi: 10.1103/PhysRevLett.88.040402. Epub 2002 Jan 08. PMID: 11801095.
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[Compensating Patient Displacement by Couch Movements in Patient Positioning System].

Igaku butsuri : Nihon Igaku Butsuri Gakkai kikanshi = Japanese journal of medical physics : an official journal of Japan Society of Medical Physics

Akagi T, Mabuchi H.
PMID: 12424390
Igaku Butsuri. 2001;21(4):245-254.

It is important to position patient accurately in radiation therapy which has a good dose concentration especially, in charged particle radiotherapy. Misalignment of patient to the center of the beam axis causes complication of normal tissue and low dose...

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Akagi T, Mabuchi H. [Compensating Patient Displacement by Couch Movements in Patient Positioning System]. Igaku Butsuri. 2001;21(4):245-254
Akagi, T., & Mabuchi, H. (2001). [Compensating Patient Displacement by Couch Movements in Patient Positioning System]. Igaku butsuri : Nihon Igaku Butsuri Gakkai kikanshi = Japanese journal of medical physics : an official journal of Japan Society of Medical Physics, 21(4), 245-254.
Akagi, Takashi, and Mabuchi, Hideyuki. "[Compensating Patient Displacement by Couch Movements in Patient Positioning System]." Igaku butsuri : Nihon Igaku Butsuri Gakkai kikanshi = Japanese journal of medical physics : an official journal of Japan Society of Medical Physics vol. 21,4 (2001): 245-254.
Akagi T, Mabuchi H. [Compensating Patient Displacement by Couch Movements in Patient Positioning System]. Igaku Butsuri. 2001;21(4):245-254. Japanese. PMID: 12424390.
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Showing 1 to 12 of 526 entries