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Performing in silico experiments on the Grid: a users perspective

science campus

Li P, Radenkovic M, Wipat A.
GSID: YQKA2yfIRtgJ
…, P Li, M Radenkovic, A Wipat, J Campus - Proc UK e-Science …, 2003 - researchgate.net

… e-Science and the Grid are not the same; the large-scale movement of data and the exploitation of computation is not the same as the … science, but something more is needed over and above the classic Grid to...

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Stevens, R., Glover, K., Greenhalgh, C., Jennings, C., Pearce, S., Li, P., ... & Campus, J. (2003, September). Performing in silico experiments on the Grid: a users perspective. In Proc UK e-Science programme All Hands Conference (Vol. 2, No. 4).
Stevens, Robert, et al. "Performing in silico experiments on the Grid: a users perspective." Proc UK e-Science programme All Hands Conference. Vol. 2. No. 4. 2003.
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Improving maternal confidence in neonatal care through a checklist intervention.

BMJ quality improvement reports

Radenkovic D, Kotecha S, Patel S, Lakhani A, Reimann-Dubbers K, Shah S, Jafree D, Mitrasinovic S, Whitten M.
PMID: 27335642
BMJ Qual Improv Rep. 2016 Jun 06;5(1). doi: 10.1136/bmjquality.u210655.w4292. eCollection 2016.

Previous qualitative studies suggest a lack of maternal confidence in care of their newborn child upon discharge into the community. This observation was supported by discussion with healthcare professionals and mothers at University College London Hospital (UCLH), highlighting specific...

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Radenkovic D, Kotecha S, Patel S, et al. Improving maternal confidence in neonatal care through a checklist intervention. BMJ Qual Improv Rep. 2016;5(1)doi: 10.1136/bmjquality.u210655.w4292.
Radenkovic, D., Kotecha, S., Patel, S., Lakhani, A., Reimann-Dubbers, K., Shah, S., Jafree, D., Mitrasinovic, S., & Whitten, M. (2016). Improving maternal confidence in neonatal care through a checklist intervention. BMJ quality improvement reports, 5(1), . https://doi.org/10.1136/bmjquality.u210655.w4292
Radenkovic, Dina, et al. "Improving maternal confidence in neonatal care through a checklist intervention." BMJ quality improvement reports vol. 5,1 (2016). doi: https://doi.org/10.1136/bmjquality.u210655.w4292
Radenkovic D, Kotecha S, Patel S, Lakhani A, Reimann-Dubbers K, Shah S, Jafree D, Mitrasinovic S, Whitten M. Improving maternal confidence in neonatal care through a checklist intervention. BMJ Qual Improv Rep. 2016 Jun 06;5(1). doi: 10.1136/bmjquality.u210655.w4292. eCollection 2016. PMID: 27335642; PMCID: PMC4915306.
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Electrochemical Reaction in Single Layer MoS2: Nanopores Opened Atom by Atom.

Nano letters

Feng J, Liu K, Graf M, Lihter M, Bulushev RD, Dumcenco D, Alexander DT, Krasnozhon D, Vuletic T, Kis A, Radenovic A.
PMID: 25928894
Nano Lett. 2015 May 13;15(5):3431-8. doi: 10.1021/acs.nanolett.5b00768. Epub 2015 May 04.

Ultrathin nanopore membranes based on 2D materials have demonstrated ultimate resolution toward DNA sequencing. Among them, molybdenum disulfide (MoS2) shows long-term stability as well as superior sensitivity enabling high throughput performance. The traditional method of fabricating nanopores with nanometer...

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Feng J, Liu K, Graf M, et al. Electrochemical Reaction in Single Layer MoS2: Nanopores Opened Atom by Atom. Nano Lett. 2015;15(5):3431-8doi: 10.1021/acs.nanolett.5b00768.
Feng, J., Liu, K., Graf, M., Lihter, M., Bulushev, R. D., Dumcenco, D., Alexander, D. T., Krasnozhon, D., Vuletic, T., Kis, A., & Radenovic, A. (2015). Electrochemical Reaction in Single Layer MoS2: Nanopores Opened Atom by Atom. Nano letters, 15(5), 3431-8. https://doi.org/10.1021/acs.nanolett.5b00768
Feng, J, et al. "Electrochemical Reaction in Single Layer MoS2: Nanopores Opened Atom by Atom." Nano letters vol. 15,5 (2015): 3431-8. doi: https://doi.org/10.1021/acs.nanolett.5b00768
Feng J, Liu K, Graf M, Lihter M, Bulushev RD, Dumcenco D, Alexander DT, Krasnozhon D, Vuletic T, Kis A, Radenovic A. Electrochemical Reaction in Single Layer MoS2: Nanopores Opened Atom by Atom. Nano Lett. 2015 May 13;15(5):3431-8. doi: 10.1021/acs.nanolett.5b00768. Epub 2015 May 04. PMID: 25928894.
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Crosstalk of Various Biomarkers That Might Provide Prompt Identification of Acute or Chronic Cardiorenal Syndromes.

Cardiorenal medicine

Tasić D, Radenkovic S, Stojanovic D, Milojkovic M, Stojanovic M, Ilic MD, Kocic G.
PMID: 26989395
Cardiorenal Med. 2016 Feb;6(2):99-107. doi: 10.1159/000437309. Epub 2015 Nov 11.

INTRODUCTION: Pathophysiological interaction between the heart and kidneys represents the basis for clinical entities called cardiorenal syndromes. The purpose of the study was to assess the relations between acute and chronic cardiorenal syndromes and biomarkers [advanced oxidation protein products,...

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Tasić D, Radenkovic S, Stojanovic D, et al. Crosstalk of Various Biomarkers That Might Provide Prompt Identification of Acute or Chronic Cardiorenal Syndromes. Cardiorenal Med. 2015;6(2):99-107doi: 10.1159/000437309.
Tasić, D., Radenkovic, S., Stojanovic, D., Milojkovic, M., Stojanovic, M., Ilic, M. D., & Kocic, G. (2016). Crosstalk of Various Biomarkers That Might Provide Prompt Identification of Acute or Chronic Cardiorenal Syndromes. Cardiorenal medicine, 6(2), 99-107. https://doi.org/10.1159/000437309
Tasić, Danijela, et al. "Crosstalk of Various Biomarkers That Might Provide Prompt Identification of Acute or Chronic Cardiorenal Syndromes." Cardiorenal medicine vol. 6,2 (2016): 99-107. doi: https://doi.org/10.1159/000437309
Tasić D, Radenkovic S, Stojanovic D, Milojkovic M, Stojanovic M, Ilic MD, Kocic G. Crosstalk of Various Biomarkers That Might Provide Prompt Identification of Acute or Chronic Cardiorenal Syndromes. Cardiorenal Med. 2016 Feb;6(2):99-107. doi: 10.1159/000437309. Epub 2015 Nov 11. PMID: 26989395; PMCID: PMC4789923.
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Acute Renal Failure in Transplanted Kidneys.

Current medicinal chemistry

Basta-Jovanovic G, Bogdanovic L, Radunovic M, Prostran M, Naumovic R, Simic-Ogrizovic S, Radojevic-Skodric S.
PMID: 26907182
Curr Med Chem. 2016 Feb 24; Epub 2016 Feb 24.

Free radical-mediated injury releases proinflammatory cytokines and activates innate immunity. It has been suggested that the early innate response and the ischemic tissue damage play roles in the development of adaptive responses, which may lead to acute kidney rejection....

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Basta-Jovanovic G, Bogdanovic L, Radunovic M, et al. Acute Renal Failure in Transplanted Kidneys. Curr Med Chem. 2016;
Basta-Jovanovic, G., Bogdanovic, L., Radunovic, M., Prostran, M., Naumovic, R., Simic-Ogrizovic, S., & Radojevic-Skodric, S. (2016). Acute Renal Failure in Transplanted Kidneys. Current medicinal chemistry, .
Basta-Jovanovic, G, et al. "Acute Renal Failure in Transplanted Kidneys." Current medicinal chemistry vol. (2016).
Basta-Jovanovic G, Bogdanovic L, Radunovic M, Prostran M, Naumovic R, Simic-Ogrizovic S, Radojevic-Skodric S. Acute Renal Failure in Transplanted Kidneys. Curr Med Chem. 2016 Feb 24; Epub 2016 Feb 24. PMID: 26907182.
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Single-layer MoS2 nanopores as nanopower generators.

Nature

Feng J, Graf M, Liu K, Ovchinnikov D, Dumcenco D, Heiranian M, Nandigana V, Aluru NR, Kis A, Radenovic A.
PMID: 27409806
Nature. 2016 Aug 11;536(7615):197-200. doi: 10.1038/nature18593. Epub 2016 Jul 13.

Making use of the osmotic pressure difference between fresh water and seawater is an attractive, renewable and clean way to generate power and is known as 'blue energy'. Another electrokinetic phenomenon, called the streaming potential, occurs when an electrolyte...

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Feng J, Graf M, Liu K, et al. Single-layer MoS2 nanopores as nanopower generators. Nature. 2016;536(7615):197-200doi: 10.1038/nature18593.
Feng, J., Graf, M., Liu, K., Ovchinnikov, D., Dumcenco, D., Heiranian, M., Nandigana, V., Aluru, N. R., Kis, A., & Radenovic, A. (2016). Single-layer MoS2 nanopores as nanopower generators. Nature, 536(7615), 197-200. https://doi.org/10.1038/nature18593
Feng, Jiandong, et al. "Single-layer MoS2 nanopores as nanopower generators." Nature vol. 536,7615 (2016): 197-200. doi: https://doi.org/10.1038/nature18593
Feng J, Graf M, Liu K, Ovchinnikov D, Dumcenco D, Heiranian M, Nandigana V, Aluru NR, Kis A, Radenovic A. Single-layer MoS2 nanopores as nanopower generators. Nature. 2016 Aug 11;536(7615):197-200. doi: 10.1038/nature18593. Epub 2016 Jul 13. PMID: 27409806.
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ZnO-Al2O3 and ZnO-TiO2 core-shell nanowire dye-sensitized solar cells.

The journal of physical chemistry. B

Law M, Greene LE, Radenovic A, Kuykendall T, Liphardt J, Yang P.
PMID: 17092013
J Phys Chem B. 2006 Nov 16;110(45):22652-63. doi: 10.1021/jp0648644.

We describe the construction and performance of dye-sensitized solar cells (DSCs) based on arrays of ZnO nanowires coated with thin shells of amorphous Al(2)O(3) or anatase TiO(2) by atomic layer deposition. We find that alumina shells of all thicknesses...

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Law M, Greene LE, Radenovic A, et al. ZnO-Al2O3 and ZnO-TiO2 core-shell nanowire dye-sensitized solar cells. J Phys Chem B. 2006;110(45):22652-63doi: 10.1021/jp0648644.
Law, M., Greene, L. E., Radenovic, A., Kuykendall, T., Liphardt, J., & Yang, P. (2006). ZnO-Al2O3 and ZnO-TiO2 core-shell nanowire dye-sensitized solar cells. The journal of physical chemistry. B, 110(45), 22652-63. https://doi.org/10.1021/jp0648644
Law, Matt, et al. "ZnO-Al2O3 and ZnO-TiO2 core-shell nanowire dye-sensitized solar cells." The journal of physical chemistry. B vol. 110,45 (2006): 22652-63. doi: https://doi.org/10.1021/jp0648644
Law M, Greene LE, Radenovic A, Kuykendall T, Liphardt J, Yang P. ZnO-Al2O3 and ZnO-TiO2 core-shell nanowire dye-sensitized solar cells. J Phys Chem B. 2006 Nov 16;110(45):22652-63. doi: 10.1021/jp0648644. PMID: 17092013.
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Light generation and harvesting in a van der Waals heterostructure.

ACS nano

Lopez-Sanchez O, Alarcon Llado E, Koman V, Fontcuberta i Morral A, Radenovic A, Kis A.
PMID: 24601517
ACS Nano. 2014 Mar 25;8(3):3042-8. doi: 10.1021/nn500480u. Epub 2014 Mar 06.

Two-dimensional (2D) materials are a new type of materials under intense study because of their interesting physical properties and wide range of potential applications from nanoelectronics to sensing and photonics. Monolayers of semiconducting transition metal dichalcogenides MoS2 or WSe2...

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Lopez-Sanchez O, Alarcon Llado E, Koman V, et al. Light generation and harvesting in a van der Waals heterostructure. ACS Nano. 2014;8(3):3042-8doi: 10.1021/nn500480u.
Lopez-Sanchez, O., Alarcon Llado, E., Koman, V., Fontcuberta i Morral, A., Radenovic, A., & Kis, A. (2014). Light generation and harvesting in a van der Waals heterostructure. ACS nano, 8(3), 3042-8. https://doi.org/10.1021/nn500480u
Lopez-Sanchez, Oriol, et al. "Light generation and harvesting in a van der Waals heterostructure." ACS nano vol. 8,3 (2014): 3042-8. doi: https://doi.org/10.1021/nn500480u
Lopez-Sanchez O, Alarcon Llado E, Koman V, Fontcuberta i Morral A, Radenovic A, Kis A. Light generation and harvesting in a van der Waals heterostructure. ACS Nano. 2014 Mar 25;8(3):3042-8. doi: 10.1021/nn500480u. Epub 2014 Mar 06. PMID: 24601517; PMCID: PMC3971963.
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Aromaticity of closed-shell charged polybenzenoid hydrocarbons.

The journal of physical chemistry. A

Ramos-Berdullas N, Radenković S, Bultinck P, Mandado M.
PMID: 23675945
J Phys Chem A. 2013 Jun 06;117(22):4679-87. doi: 10.1021/jp401629k. Epub 2013 May 28.

The aromatic stabilization of closed-shell charged polybenzenoid hydrocarbons (PBHs) has been scrutinized by means of energetic and magnetic aromaticity criteria and by direct measures of electron delocalization. Thus, topological resonance energies and their circuit contributions, ring current maps, and...

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Ramos-Berdullas N, Radenković S, Bultinck P, et al. Aromaticity of closed-shell charged polybenzenoid hydrocarbons. J Phys Chem A. 2013;117(22):4679-87doi: 10.1021/jp401629k.
Ramos-Berdullas, N., Radenković, S., Bultinck, P., & Mandado, M. (2013). Aromaticity of closed-shell charged polybenzenoid hydrocarbons. The journal of physical chemistry. A, 117(22), 4679-87. https://doi.org/10.1021/jp401629k
Ramos-Berdullas, Nicolás, et al. "Aromaticity of closed-shell charged polybenzenoid hydrocarbons." The journal of physical chemistry. A vol. 117,22 (2013): 4679-87. doi: https://doi.org/10.1021/jp401629k
Ramos-Berdullas N, Radenković S, Bultinck P, Mandado M. Aromaticity of closed-shell charged polybenzenoid hydrocarbons. J Phys Chem A. 2013 Jun 06;117(22):4679-87. doi: 10.1021/jp401629k. Epub 2013 May 28. PMID: 23675945.
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Fast and automatic processing of multi-level events in nanopore translocation experiments.

Nanoscale

Raillon C, Granjon P, Graf M, Steinbock LJ, Radenovic A.
PMID: 22786690
Nanoscale. 2012 Aug 21;4(16):4916-24. doi: 10.1039/c2nr30951c. Epub 2012 Jul 11.

We have developed a method to analyze in detail, translocation events providing a novel and flexible tool for data analysis of nanopore experiments. Our program, called OpenNanopore, is based on the cumulative sums algorithm (CUSUM algorithm). This algorithm is...

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Raillon C, Granjon P, Graf M, et al. Fast and automatic processing of multi-level events in nanopore translocation experiments. Nanoscale. 2012;4(16):4916-24doi: 10.1039/c2nr30951c.
Raillon, C., Granjon, P., Graf, M., Steinbock, L. J., & Radenovic, A. (2012). Fast and automatic processing of multi-level events in nanopore translocation experiments. Nanoscale, 4(16), 4916-24. https://doi.org/10.1039/c2nr30951c
Raillon, C, et al. "Fast and automatic processing of multi-level events in nanopore translocation experiments." Nanoscale vol. 4,16 (2012): 4916-24. doi: https://doi.org/10.1039/c2nr30951c
Raillon C, Granjon P, Graf M, Steinbock LJ, Radenovic A. Fast and automatic processing of multi-level events in nanopore translocation experiments. Nanoscale. 2012 Aug 21;4(16):4916-24. doi: 10.1039/c2nr30951c. Epub 2012 Jul 11. PMID: 22786690.
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Comparative study of aromaticity in tetraoxa[8]circulenes.

The journal of physical chemistry. A

Radenković S, Gutman I, Bultinck P.
PMID: 22937838
J Phys Chem A. 2012 Sep 20;116(37):9421-30. doi: 10.1021/jp307281y. Epub 2012 Sep 11.

A detailed analysis of the local aromaticity in tetraoxa[8]circulene and its benzo-annelated derivates was performed by means of the energy effect (ef), multicenter delocalization indices (MCI), harmonic oscillator model of aromaticity (HOMA) index, nucleus independent chemical shifts (NICS), and...

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Radenković S, Gutman I, Bultinck P. Comparative study of aromaticity in tetraoxa[8]circulenes. J Phys Chem A. 2012;116(37):9421-30doi: 10.1021/jp307281y.
Radenković, S., Gutman, I., & Bultinck, P. (2012). Comparative study of aromaticity in tetraoxa[8]circulenes. The journal of physical chemistry. A, 116(37), 9421-30. https://doi.org/10.1021/jp307281y
Radenković, Slavko, et al. "Comparative study of aromaticity in tetraoxa[8]circulenes." The journal of physical chemistry. A vol. 116,37 (2012): 9421-30. doi: https://doi.org/10.1021/jp307281y
Radenković S, Gutman I, Bultinck P. Comparative study of aromaticity in tetraoxa[8]circulenes. J Phys Chem A. 2012 Sep 20;116(37):9421-30. doi: 10.1021/jp307281y. Epub 2012 Sep 11. PMID: 22937838.
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Centimeter-Sized Single-Orientation Monolayer Hexagonal Boron Nitride With or Without Nanovoids.

Nano letters

Cun H, Hemmi A, Miniussi E, Bernard C, Probst B, Liu K, Alexander DTL, Kleibert A, Mette G, Weinl M, Schreck M, Osterwalder J, Radenovic A, Greber T.
PMID: 29314849
Nano Lett. 2018 Feb 14;18(2):1205-1212. doi: 10.1021/acs.nanolett.7b04752. Epub 2018 Jan 17.

Large-area hexagonal boron nitride (h-BN) promises many new applications of two-dimensional materials, such as the protective packing of reactive surfaces or as membranes in liquids. However, scalable production beyond exfoliation from bulk single crystals remained a major challenge. Single-orientation...

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Cun H, Hemmi A, Miniussi E, et al. Centimeter-Sized Single-Orientation Monolayer Hexagonal Boron Nitride With or Without Nanovoids. Nano Lett. 2018;18(2):1205-1212doi: 10.1021/acs.nanolett.7b04752.
Cun, H., Hemmi, A., Miniussi, E., Bernard, C., Probst, B., Liu, K., Alexander, D. T. L., Kleibert, A., Mette, G., Weinl, M., Schreck, M., Osterwalder, J., Radenovic, A., & Greber, T. (2018). Centimeter-Sized Single-Orientation Monolayer Hexagonal Boron Nitride With or Without Nanovoids. Nano letters, 18(2), 1205-1212. https://doi.org/10.1021/acs.nanolett.7b04752
Cun, Huanyao, et al. "Centimeter-Sized Single-Orientation Monolayer Hexagonal Boron Nitride With or Without Nanovoids." Nano letters vol. 18,2 (2018): 1205-1212. doi: https://doi.org/10.1021/acs.nanolett.7b04752
Cun H, Hemmi A, Miniussi E, Bernard C, Probst B, Liu K, Alexander DTL, Kleibert A, Mette G, Weinl M, Schreck M, Osterwalder J, Radenovic A, Greber T. Centimeter-Sized Single-Orientation Monolayer Hexagonal Boron Nitride With or Without Nanovoids. Nano Lett. 2018 Feb 14;18(2):1205-1212. doi: 10.1021/acs.nanolett.7b04752. Epub 2018 Jan 17. PMID: 29314849.
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Showing 1 to 12 of 158 entries