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Showing 1 to 12 of 166 entries
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A Neptune-sized transiting planet closely orbiting a 5–10-million-year-old star.

Nature

David TJ, Hillenbrand LA, Petigura EA, Carpenter JM, Crossfield IJ, Hinkley S, Ciardi DR, Howard AW, Isaacson HT, Cody AM, Schlieder JE, Beichman CA, Barenfeld SA.
PMID: 27324846
Nature. 2016 Jun 30;534(7609):658-61. doi: 10.1038/nature18293. Epub 2016 Jun 20.

Theories of the formation and early evolution of planetary systems postulate that planets are born in circumstellar disks, and undergo radial migration during and after dissipation of the dust and gas disk from which they formed. The precise ages...

Recurrent DNA virus domestication leading to different parasite virulence strategies.

Science advances

Pichon A, Bézier A, Urbach S, Aury JM, Jouan V, Ravallec M, Guy J, Cousserans F, Thézé J, Gauthier J, Demettre E, Schmieder S, Wurmser F, Sibut V, Poirié M, Colinet D, da Silva C, Couloux A, Barbe V, Drezen JM, Volkoff AN.
PMID: 26702449
Sci Adv. 2015 Nov 27;1(10):e1501150. doi: 10.1126/sciadv.1501150. eCollection 2015 Nov.

Relics of ancient infections are abundant in eukaryote genomes, but little is known about how they evolve when they confer a functional benefit on their host. We show here, for the first time, that the virus-like particles shown to...

Expertise: No Longer a Sine Qua Non for Guideline Authors?.

Hypertension (Dallas, Tex. : 1979)

Messerli FH, Hofstetter L, Agabiti-Rosei E, Burnier M, Elliott WJ, Franklin SS, Grodzicki T, Kario K, Kjeldsen SE, Kostis JB, Laurent S, Leenen FH, Lund-Johansen P, Mancia G, Narkiewicz K, Papademetriou V, Parati G, Poulter N, Redon J, Rimoldi SF, Ruilope LM, Schiffrin EL, Schmieder RE, Schwartz AB, Sever P, Sowers JR, Staessen JA, Wang J, Weber M, Williams B.
PMID: 28652465
Hypertension. 2017 Aug;70(2):235-237. doi: 10.1161/HYPERTENSIONAHA.117.09470. Epub 2017 Jun 26.

No abstract available.

Combining de novo and reference-guided assembly with scaffold_builder.

Source code for biology and medicine

Silva GG, Dutilh BE, Matthews TD, Elkins K, Schmieder R, Dinsdale EA, Edwards RA.
PMID: 24267787
Source Code Biol Med. 2013 Nov 22;8(1):23. doi: 10.1186/1751-0473-8-23.

Genome sequencing has become routine, however genome assembly still remains a challenge despite the computational advances in the last decade. In particular, the abundance of repeat elements in genomes makes it difficult to assemble them into a single complete...

Optimization of a precision-cut trout liver tissue slice assay as a screen for vitellogenin induction: comparison of slice incubation techniques.

Aquatic toxicology (Amsterdam, Netherlands)

Schmieder P, Tapper M, Linnum A, Denny J, Kolanczyk R, Johnson R.
PMID: 10854670
Aquat Toxicol. 2000 Jul 01;49(4):251-268. doi: 10.1016/s0166-445x(99)00087-9.

An in vitro male rainbow trout liver slice assay has been developed for long-term incubation of precision-cut slices for the detection of vitellogenin (VTG) protein induction in response to xenobiotic chemicals. The assay was optimized to allow 72 h...

Analysis of damped and fusion processes in the 197Au+51V reaction at Elab.

Physical review. C, Nuclear physics

Butler MA, Schmieder LM, Schröder WU.
PMID: 9954423
Phys Rev C Nucl Phys. 1988 Jan;37(1):139-157. doi: 10.1103/physrevc.37.139.

No abstract available.

Vinylphosphonites for Staudinger-induced chemoselective peptide cyclization and functionalization.

Chemical science

Kasper MA, Glanz M, Oder A, Schmieder P, von Kries JP, Hackenberger CPR.
PMID: 31341586
Chem Sci. 2019 May 16;10(25):6322-6329. doi: 10.1039/c9sc01345h. eCollection 2019 Jul 07.

In this paper, we introduce vinylphosphonites for chemoselective Staudinger-phosphonite reactions (SPhR) with azides to form vinylphosphonamidates for the subsequent modification of cysteine residues in peptides and proteins. An electron-rich alkene is turned into an electron-deficient vinylphosphonamidate, thereby inducing electrophilic...

Treatment with low-dose tacrolimus inhibits bleeding complications in a patient with hereditary hemorrhagic telangiectasia and pulmonary arterial hypertension.

Pulmonary circulation

Sommer N, Droege F, Gamen KE, Geisthoff U, Gall H, Tello K, Richter MJ, Deubner LM, Schmiedel R, Hecker M, Spiekerkoetter E, Wirsching K, Seeger W, Ghofrani HA, Pullamsetti S.
PMID: 30260738
Pulm Circ. 2019 Apr-Jun;9(2):2045894018805406. doi: 10.1177/2045894018805406. Epub 2018 Sep 27.

Pulmonary arterial hypertension (PAH) can be found in patients suffering from a loss-of-function mutation of the gene encoding for the activin receptor-like kinase 1 (ALK-1), a bone morphogenetic protein (BMP) type 1 receptor. Interestingly, ALK-1 mutations also lead to...

Bloch surface wave enhanced biosensor for the direct detection of Angiopoietin-2 tumor biomarker in human plasma.

Biomedical optics express

Rizzo R, Alvaro M, Danz N, Napione L, Descrovi E, Schmieder S, Sinibaldi A, Rana S, Chandrawati R, Munzert P, Schubert T, Maillart E, Anopchenko A, Rivolo P, Mascioletti A, Förster E, Sonntag F, Stevens MM, Bussolino F, Michelotti F.
PMID: 29552391
Biomed Opt Express. 2018 Jan 08;9(2):529-542. doi: 10.1364/BOE.9.000529. eCollection 2018 Feb 01.

Quantitative detection of angiogenic biomarkers provides a powerful tool to diagnose cancers in early stages and to follow its progression during therapy. Conventional tests require trained personnel, dedicated laboratory equipment and are generally time-consuming. Herein, we propose our developed...

Corrigendum: Allelic variation contributes to bacterial host specificity.

Nature communications

Yue M, Han X, De Masi L, Zhu C, Ma X, Zhang J, Wu R, Schmieder R, Kaushik RS, Fraser GP, Zhao S, McDermott PF, Weill FX, Mainil JG, Arze C, Fricke WF, Edwards RA, Brisson D, Zhang NR, Rankin SC, Schifferli DM.
PMID: 28786410
Nat Commun. 2017 Aug 08;8:15229. doi: 10.1038/ncomms15229.

This corrects the article DOI: 10.1038/ncomms9754.

Impaired coordination of nucleophile and increased hydrophobicity in the +1 subsite shift levansucrase activity towards transfructosylation.

Glycobiology

Ortiz-Soto ME, Possiel C, Görl J, Vogel A, Schmiedel R, Seibel J.
PMID: 28575294
Glycobiology. 2017 Aug 01;27(8):755-765. doi: 10.1093/glycob/cwx050.

Bacterial levansucrases produce β(2,6)-linked levan-type polysaccharides using sucrose or sucrose analogs as donor/acceptor substrates. However, the dominant reaction of Bacillus megaterium levansucrase (Bm-LS) is hydrolysis. Single domain levansucrases from Gram-positive bacteria display a wide substrate-binding pocket with open access...

Active and silent chromophore isoforms for phytochrome Pr photoisomerization: An alternative evolutionary strategy to optimize photoreaction quantum yields.

Structural dynamics (Melville, N.Y.)

Yang Y, Linke M, von Haimberger T, Matute R, González L, Schmieder P, Heyne K.
PMID: 26798771
Struct Dyn. 2014 Feb 05;1(1):014701. doi: 10.1063/1.4865233. eCollection 2014 Jan.

Photoisomerization of a protein bound chromophore is the basis of light sensing of many photoreceptors. We tracked Z-to-E photoisomerization of Cph1 phytochrome chromophore PCB in the Pr form in real-time. Two different phycocyanobilin (PCB) ground state geometries with different...

Showing 1 to 12 of 166 entries