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Towards computational improvement of DNA database indexing and short DNA query searching.

Biotechnology, biotechnological equipment

Stojanov D, Koceski S, Mileva A, Koceska N, Bande CM.
PMID: 26019584
Biotechnol Biotechnol Equip. 2014 Sep 03;28(5):958-967. doi: 10.1080/13102818.2014.959711. Epub 2014 Oct 31.

In order to facilitate and speed up the search of massive DNA databases, the database is indexed at the beginning, employing a mapping function. By searching through the indexed data structure, exact query hits can be identified. If the...

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Stojanov D, Koceski S, Mileva A, et al. Towards computational improvement of DNA database indexing and short DNA query searching. Biotechnol Biotechnol Equip. 2014;28(5):958-967doi: 10.1080/13102818.2014.959711.
Stojanov, D., Koceski, S., Mileva, A., Koceska, N., & Bande, C. M. (2014). Towards computational improvement of DNA database indexing and short DNA query searching. Biotechnology, biotechnological equipment, 28(5), 958-967. https://doi.org/10.1080/13102818.2014.959711
Stojanov, Done, et al. "Towards computational improvement of DNA database indexing and short DNA query searching." Biotechnology, biotechnological equipment vol. 28,5 (2014): 958-967. doi: https://doi.org/10.1080/13102818.2014.959711
Stojanov D, Koceski S, Mileva A, Koceska N, Bande CM. Towards computational improvement of DNA database indexing and short DNA query searching. Biotechnol Biotechnol Equip. 2014 Sep 03;28(5):958-967. doi: 10.1080/13102818.2014.959711. Epub 2014 Oct 31. PMID: 26019584; PMCID: PMC4434100.
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Aseptic intrafascial and extrafascial abscesses 10 years after a 2-level DIAM insertion procedure.

Journal of neurosurgery. Spine

Stefanovic I, Radisavljevic M, Stojanov D.
PMID: 26161514
J Neurosurg Spine. 2015 Nov;23(5):647-651. doi: 10.3171/2015.3.SPINE1589. Epub 2015 Jul 10.

With the aim to prevent the so-called adjacent-segment disease in spinal fusion surgery and to serve as the primary surgical procedure for the management of low-back pain syndrome or neurogenic claudication in spinal stenosis, the so-called dynamic spine stabilization...

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Stefanovic I, Radisavljevic M, Stojanov D. Aseptic intrafascial and extrafascial abscesses 10 years after a 2-level DIAM insertion procedure. J Neurosurg Spine. 2015;23(5):647-651doi: 10.3171/2015.3.SPINE1589.
Stefanovic, I., Radisavljevic, M., & Stojanov, D. (2015). Aseptic intrafascial and extrafascial abscesses 10 years after a 2-level DIAM insertion procedure. Journal of neurosurgery. Spine, 23(5), 647-651. https://doi.org/10.3171/2015.3.SPINE1589
Stefanovic, Ivan, et al. "Aseptic intrafascial and extrafascial abscesses 10 years after a 2-level DIAM insertion procedure." Journal of neurosurgery. Spine vol. 23,5 (2015): 647-651. doi: https://doi.org/10.3171/2015.3.SPINE1589
Stefanovic I, Radisavljevic M, Stojanov D. Aseptic intrafascial and extrafascial abscesses 10 years after a 2-level DIAM insertion procedure. J Neurosurg Spine. 2015 Nov;23(5):647-651. doi: 10.3171/2015.3.SPINE1589. Epub 2015 Jul 10. PMID: 26161514.
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Energy Gaps and Layer Polarization of Integer and Fractional Quantum Hall States in Bilayer Graphene.

Physical review letters

Shi Y, Lee Y, Che S, Pi Z, Espiritu T, Stepanov P, Smirnov D, Lau CN, Zhang F.
PMID: 26894724
Phys Rev Lett. 2016 Feb 05;116(5):056601. doi: 10.1103/PhysRevLett.116.056601. Epub 2016 Feb 05.

Owing to the spin, valley, and orbital symmetries, the lowest Landau level in bilayer graphene exhibits multicomponent quantum Hall ferromagnetism. Using transport spectroscopy, we investigate the energy gaps of integer and fractional quantum Hall (QH) states in bilayer graphene...

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Shi Y, Lee Y, Che S, et al. Energy Gaps and Layer Polarization of Integer and Fractional Quantum Hall States in Bilayer Graphene. Phys Rev Lett. 2016;116(5):056601doi: 10.1103/PhysRevLett.116.056601.
Shi, Y., Lee, Y., Che, S., Pi, Z., Espiritu, T., Stepanov, P., Smirnov, D., Lau, C. N., & Zhang, F. (2016). Energy Gaps and Layer Polarization of Integer and Fractional Quantum Hall States in Bilayer Graphene. Physical review letters, 116(5), 056601. https://doi.org/10.1103/PhysRevLett.116.056601
Shi, Yanmeng, et al. "Energy Gaps and Layer Polarization of Integer and Fractional Quantum Hall States in Bilayer Graphene." Physical review letters vol. 116,5 (2016): 056601. doi: https://doi.org/10.1103/PhysRevLett.116.056601
Shi Y, Lee Y, Che S, Pi Z, Espiritu T, Stepanov P, Smirnov D, Lau CN, Zhang F. Energy Gaps and Layer Polarization of Integer and Fractional Quantum Hall States in Bilayer Graphene. Phys Rev Lett. 2016 Feb 05;116(5):056601. doi: 10.1103/PhysRevLett.116.056601. Epub 2016 Feb 05. PMID: 26894724.
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[Giant cysts of the lungs].

Khirurgiia

STOIANOV K, TENCHOV G, MARINOVA L.
PMID: 13503040
Khirurgiia (Sofiia). 1957;10(6):489-93.

No abstract available.

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STOIANOV K, TENCHOV G, MARINOVA L. Gigantski kisti na beliia drob. [Giant cysts of the lungs]. Khirurgiia (Sofiia). 1957;10(6):489-93
STOIANOV, K., TENCHOV, G., & MARINOVA, L. (1957). Gigantski kisti na beliia drob. [Giant cysts of the lungs]. Khirurgiia, 10(6), 489-93.
STOIANOV, K, et al. "Gigantski kisti na beliia drob." [Giant cysts of the lungs]. Khirurgiia vol. 10,6 (1957): 489-93.
STOIANOV K, TENCHOV G, MARINOVA L. Gigantski kisti na beliia drob. [Giant cysts of the lungs]. Khirurgiia (Sofiia). 1957;10(6):489-93. Bulgarian. PMID: 13503040.
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Correlation of antisynthetase antibody levels with disease course in a patient with interstitial lung disease and elevated muscle enzymes.

Journal of clinical rheumatology : practical reports on rheumatic & musculoskeletal diseases

Stojanov L, Satoh M, Hirakata M, Reeves WH.
PMID: 19078036
J Clin Rheumatol. 1996 Apr;2(2):89-95. doi: 10.1097/00124743-199604000-00006.

Antiglycyl tRNA synthetase is an unusual autoantibody specificity associated with polymyositis and dermatomyositis complicated by interstitial lung disease. We report here autoantibodies to glycyl tRNA synthetase in a patient with systemic lupus erythematosus and interstitial lung disease. During the...

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Stojanov L, Satoh M, Hirakata M, et al. Correlation of antisynthetase antibody levels with disease course in a patient with interstitial lung disease and elevated muscle enzymes. J Clin Rheumatol. 1996;2(2):89-95doi: 10.1097/00124743-199604000-00006.
Stojanov, L., Satoh, M., Hirakata, M., & Reeves, W. H. (1996). Correlation of antisynthetase antibody levels with disease course in a patient with interstitial lung disease and elevated muscle enzymes. Journal of clinical rheumatology : practical reports on rheumatic & musculoskeletal diseases, 2(2), 89-95. https://doi.org/10.1097/00124743-199604000-00006
Stojanov, L, et al. "Correlation of antisynthetase antibody levels with disease course in a patient with interstitial lung disease and elevated muscle enzymes." Journal of clinical rheumatology : practical reports on rheumatic & musculoskeletal diseases vol. 2,2 (1996): 89-95. doi: https://doi.org/10.1097/00124743-199604000-00006
Stojanov L, Satoh M, Hirakata M, Reeves WH. Correlation of antisynthetase antibody levels with disease course in a patient with interstitial lung disease and elevated muscle enzymes. J Clin Rheumatol. 1996 Apr;2(2):89-95. doi: 10.1097/00124743-199604000-00006. PMID: 19078036.
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Deep Unsupervised Learning on a Desktop PC: A Primer for Cognitive Scientists.

Frontiers in psychology

Testolin A, Stoianov I, De Filippo De Grazia M, Zorzi M.
PMID: 23653617
Front Psychol. 2013 May 06;4:251. doi: 10.3389/fpsyg.2013.00251. eCollection 2013.

Deep belief networks hold great promise for the simulation of human cognition because they show how structured and abstract representations may emerge from probabilistic unsupervised learning. These networks build a hierarchy of progressively more complex distributed representations of the...

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Testolin A, Stoianov I, De Filippo De Grazia M, et al. Deep Unsupervised Learning on a Desktop PC: A Primer for Cognitive Scientists. Front Psychol. 2013;4:251doi: 10.3389/fpsyg.2013.00251.
Testolin, A., Stoianov, I., De Filippo De Grazia, M., & Zorzi, M. (2013). Deep Unsupervised Learning on a Desktop PC: A Primer for Cognitive Scientists. Frontiers in psychology, 4251. https://doi.org/10.3389/fpsyg.2013.00251
Testolin, Alberto, et al. "Deep Unsupervised Learning on a Desktop PC: A Primer for Cognitive Scientists." Frontiers in psychology vol. 4 (2013): 251. doi: https://doi.org/10.3389/fpsyg.2013.00251
Testolin A, Stoianov I, De Filippo De Grazia M, Zorzi M. Deep Unsupervised Learning on a Desktop PC: A Primer for Cognitive Scientists. Front Psychol. 2013 May 06;4:251. doi: 10.3389/fpsyg.2013.00251. eCollection 2013. PMID: 23653617; PMCID: PMC3644707.
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Dispersion relation of the collective excitations in a resonantly driven polariton fluid.

Nature communications

Stepanov P, Amelio I, Rousset JG, Bloch J, Lemaître A, Amo A, Minguzzi A, Carusotto I, Richard M.
PMID: 31455770
Nat Commun. 2019 Aug 27;10(1):3869. doi: 10.1038/s41467-019-11886-3.

Exciton-polaritons in semiconductor microcavities constitute the archetypal realization of a quantum fluid of light. Under coherent optical drive, remarkable effects such as superfluidity, dark solitons or the nucleation of vortices have been observed, and can be all understood as...

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Stepanov P, Amelio I, Rousset JG, et al. Dispersion relation of the collective excitations in a resonantly driven polariton fluid. Nat Commun. 2019;10(1):3869doi: 10.1038/s41467-019-11886-3.
Stepanov, P., Amelio, I., Rousset, J. G., Bloch, J., Lemaître, A., Amo, A., Minguzzi, A., Carusotto, I., & Richard, M. (2019). Dispersion relation of the collective excitations in a resonantly driven polariton fluid. Nature communications, 10(1), 3869. https://doi.org/10.1038/s41467-019-11886-3
Stepanov, Petr, et al. "Dispersion relation of the collective excitations in a resonantly driven polariton fluid." Nature communications vol. 10,1 (2019): 3869. doi: https://doi.org/10.1038/s41467-019-11886-3
Stepanov P, Amelio I, Rousset JG, Bloch J, Lemaître A, Amo A, Minguzzi A, Carusotto I, Richard M. Dispersion relation of the collective excitations in a resonantly driven polariton fluid. Nat Commun. 2019 Aug 27;10(1):3869. doi: 10.1038/s41467-019-11886-3. PMID: 31455770; PMCID: PMC6712214.
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Male infertility: the intracellular bacterial hypothesis.

New microbes and new infections

Stojanov M, Baud D, Greub G, Vulliemoz N.
PMID: 30224969
New Microbes New Infect. 2018 Aug 22;26:37-41. doi: 10.1016/j.nmni.2018.08.012. eCollection 2018 Nov.

Infertility is a disease that affects one in seven couples. As male infertility affects approximately 30% of these couples with an unknown cause in half the cases, it represents a major public health concern. The classic treatment of male...

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Stojanov M, Baud D, Greub G, et al. Male infertility: the intracellular bacterial hypothesis. New Microbes New Infect. 2018;26:37-41doi: 10.1016/j.nmni.2018.08.012.
Stojanov, M., Baud, D., Greub, G., & Vulliemoz, N. (2018). Male infertility: the intracellular bacterial hypothesis. New microbes and new infections, 2637-41. https://doi.org/10.1016/j.nmni.2018.08.012
Stojanov, M, et al. "Male infertility: the intracellular bacterial hypothesis." New microbes and new infections vol. 26 (2018): 37-41. doi: https://doi.org/10.1016/j.nmni.2018.08.012
Stojanov M, Baud D, Greub G, Vulliemoz N. Male infertility: the intracellular bacterial hypothesis. New Microbes New Infect. 2018 Aug 22;26:37-41. doi: 10.1016/j.nmni.2018.08.012. eCollection 2018 Nov. PMID: 30224969; PMCID: PMC6138880.
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Direct Estimation of Reference Intervals for Thyroid Parameters in the Republic of Srpska.

Journal of medical biochemistry

Mirjanic-Azaric B, Avram S, Stojakovic-Jelisavac T, Stojanovic D, Petkovic M, Bogavac-Stanojevic N, Ignjatovic S, Stojanov M.
PMID: 28680357
J Med Biochem. 2017 Apr 22;36(2):137-144. doi: 10.1515/jomb-2017-0008. eCollection 2017 Apr.

BACKGROUND: The aim of this study was to determine the reference values for thyrotropin (TSH), thyroid hormones (total and free thyroxine, T4 and fT4; total and free triiodothyronine, T3 and fT3), thyroglobulin (Tg) and thyroid antibodies (thyroid peroxidase, TPOAb...

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Mirjanic-Azaric B, Avram S, Stojakovic-Jelisavac T, et al. Direct Estimation of Reference Intervals for Thyroid Parameters in the Republic of Srpska. J Med Biochem. 2017;36(2):137-144doi: 10.1515/jomb-2017-0008.
Mirjanic-Azaric, B., Avram, S., Stojakovic-Jelisavac, T., Stojanovic, D., Petkovic, M., Bogavac-Stanojevic, N., Ignjatovic, S., & Stojanov, M. (2017). Direct Estimation of Reference Intervals for Thyroid Parameters in the Republic of Srpska. Journal of medical biochemistry, 36(2), 137-144. https://doi.org/10.1515/jomb-2017-0008
Mirjanic-Azaric, Bosa, et al. "Direct Estimation of Reference Intervals for Thyroid Parameters in the Republic of Srpska." Journal of medical biochemistry vol. 36,2 (2017): 137-144. doi: https://doi.org/10.1515/jomb-2017-0008
Mirjanic-Azaric B, Avram S, Stojakovic-Jelisavac T, Stojanovic D, Petkovic M, Bogavac-Stanojevic N, Ignjatovic S, Stojanov M. Direct Estimation of Reference Intervals for Thyroid Parameters in the Republic of Srpska. J Med Biochem. 2017 Apr 22;36(2):137-144. doi: 10.1515/jomb-2017-0008. eCollection 2017 Apr. PMID: 28680357; PMCID: PMC5471646.
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Hydraulically informed graph theoretic measure of link criticality for the resilience analysis of water distribution networks.

Applied network science

Ulusoy AJ, Stoianov I, Chazerain A.
PMID: 30839751
Appl Netw Sci. 2018;3(1):31. doi: 10.1007/s41109-018-0079-y. Epub 2018 Aug 13.

Water Distribution Networks (WDN) are complex and highly interconnected systems. To maintain operation under failure conditions, WDNs should have built-in resilience based on topological and energy redundancy. There are various methods for analysing the resilience of WDNs based on...

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Ulusoy AJ, Stoianov I, Chazerain A. Hydraulically informed graph theoretic measure of link criticality for the resilience analysis of water distribution networks. Appl Netw Sci. 2018;3(1):31doi: 10.1007/s41109-018-0079-y.
Ulusoy, A. J., Stoianov, I., & Chazerain, A. (2018). Hydraulically informed graph theoretic measure of link criticality for the resilience analysis of water distribution networks. Applied network science, 3(1), 31. https://doi.org/10.1007/s41109-018-0079-y
Ulusoy, Aly-Joy, et al. "Hydraulically informed graph theoretic measure of link criticality for the resilience analysis of water distribution networks." Applied network science vol. 3,1 (2018): 31. doi: https://doi.org/10.1007/s41109-018-0079-y
Ulusoy AJ, Stoianov I, Chazerain A. Hydraulically informed graph theoretic measure of link criticality for the resilience analysis of water distribution networks. Appl Netw Sci. 2018;3(1):31. doi: 10.1007/s41109-018-0079-y. Epub 2018 Aug 13. PMID: 30839751; PMCID: PMC6214304.
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Thermal Decoherence of a Nonequilibrium Polariton Fluid.

Physical review letters

Klembt S, Stepanov P, Klein T, Minguzzi A, Richard M.
PMID: 29400531
Phys Rev Lett. 2018 Jan 19;120(3):035301. doi: 10.1103/PhysRevLett.120.035301.

Exciton polaritons constitute a unique realization of a quantum fluid interacting with its environment. Using selenide-based microcavities, we exploit this feature to warm up a polariton condensate in a controlled way and monitor its spatial coherence. We determine directly...

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Klembt S, Stepanov P, Klein T, et al. Thermal Decoherence of a Nonequilibrium Polariton Fluid. Phys Rev Lett. 2018;120(3):035301doi: 10.1103/PhysRevLett.120.035301.
Klembt, S., Stepanov, P., Klein, T., Minguzzi, A., & Richard, M. (2018). Thermal Decoherence of a Nonequilibrium Polariton Fluid. Physical review letters, 120(3), 035301. https://doi.org/10.1103/PhysRevLett.120.035301
Klembt, Sebastian, et al. "Thermal Decoherence of a Nonequilibrium Polariton Fluid." Physical review letters vol. 120,3 (2018): 035301. doi: https://doi.org/10.1103/PhysRevLett.120.035301
Klembt S, Stepanov P, Klein T, Minguzzi A, Richard M. Thermal Decoherence of a Nonequilibrium Polariton Fluid. Phys Rev Lett. 2018 Jan 19;120(3):035301. doi: 10.1103/PhysRevLett.120.035301. PMID: 29400531.
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Effect of .

Frontiers in pharmacology

Contreras-Castillo S, Plaza A, Stojanova J, Navarro G, Carmona R, Corvalán F, Cerpa L, Sandoval C, Muñoz D, Leiva M, Castañeda LE, Farias N, Alvarez C, Llull G, Mezzano S, Ardiles L, Varela N, Rodríguez MS, Flores C, Cayún JP, Krall P, Quiñones LA.
PMID: 34938174
Front Pharmacol. 2021 Dec 06;12:674117. doi: 10.3389/fphar.2021.674117. eCollection 2021.

Cyclosporine (CsA) and tacrolimus (TAC) are immunosuppressant drugs characterized by a narrow therapeutic range and high pharmacokinetic variability. The effect of polymorphisms in genes related to the metabolism and transport of these drugs, namely

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Contreras-Castillo S, Plaza A, Stojanova J, et al. Effect of . Front Pharmacol. 2021;12:674117doi: 10.3389/fphar.2021.674117.
Contreras-Castillo, S., Plaza, A., Stojanova, J., Navarro, G., Carmona, R., Corvalán, F., Cerpa, L., Sandoval, C., Muñoz, D., Leiva, M., Castañeda, L. E., Farias, N., Alvarez, C., Llull, G., Mezzano, S., Ardiles, L., Varela, N., Rodríguez, M. S., Flores, C., Cayún, J. P., Krall, P., & Quiñones, L. A. (2021). Effect of . Frontiers in pharmacology, 12674117. https://doi.org/10.3389/fphar.2021.674117
Contreras-Castillo, Stephania, et al. "Effect of ." Frontiers in pharmacology vol. 12 (2021): 674117. doi: https://doi.org/10.3389/fphar.2021.674117
Contreras-Castillo S, Plaza A, Stojanova J, Navarro G, Carmona R, Corvalán F, Cerpa L, Sandoval C, Muñoz D, Leiva M, Castañeda LE, Farias N, Alvarez C, Llull G, Mezzano S, Ardiles L, Varela N, Rodríguez MS, Flores C, Cayún JP, Krall P, Quiñones LA. Effect of . Front Pharmacol. 2021 Dec 06;12:674117. doi: 10.3389/fphar.2021.674117. eCollection 2021. PMID: 34938174; PMCID: PMC8685429.
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