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[Association of CTLA4 and TNF gene polymorphisms with endocrine ophthalmopathy in ethnic Russian patients with Graves' disease].

Terapevticheskii arkhiv

Martirosian NS, Burdennyi AM, Trukhina LV, Panteleeva OG, Saakyan SV, Petunina NA, Nosikov VV.
PMID: 26978177
Ter Arkh. 2015;87(10):67-71. doi: 10.17116/terarkh2015871067-71.

AIM: To analyze the associations of the rs3087243 CTLA4 polymorphism and the rs1800629 TNF polymorphism with endocrine ophthalmopathy (EOP) in ethnic Russian patients with Graves' disease (GD).MATERIAL AND METHODS: The case-control study enrolled 205 patients with GD. The distribution...

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Martirosian NS, Burdennyi AM, Trukhina LV, et al. Assotsiatsiya polimorfnykh markerov genov CTLA4 i TNF s endokrinnoi oftal'mopatiei u patsientov russkogo proiskhozhdeniya s bolezn'yu Greivsa. [Association of CTLA4 and TNF gene polymorphisms with endocrine ophthalmopathy in ethnic Russian patients with Graves' disease]. Ter Arkh. 2015;87(10):67-71doi: 10.17116/terarkh2015871067-71.
Martirosian, N. S., Burdennyi, A. M., Trukhina, L. V., Panteleeva, O. G., Saakyan, S. V., Petunina, N. A., & Nosikov, V. V. (2015). Assotsiatsiya polimorfnykh markerov genov CTLA4 i TNF s endokrinnoi oftal'mopatiei u patsientov russkogo proiskhozhdeniya s bolezn'yu Greivsa. [Association of CTLA4 and TNF gene polymorphisms with endocrine ophthalmopathy in ethnic Russian patients with Graves' disease]. Terapevticheskii arkhiv, 87(10), 67-71. https://doi.org/10.17116/terarkh2015871067-71
Martirosian, N S, et al. "Assotsiatsiya polimorfnykh markerov genov CTLA4 i TNF s endokrinnoi oftal'mopatiei u patsientov russkogo proiskhozhdeniya s bolezn'yu Greivsa." [Association of CTLA4 and TNF gene polymorphisms with endocrine ophthalmopathy in ethnic Russian patients with Graves' disease]. Terapevticheskii arkhiv vol. 87,10 (2015): 67-71. doi: https://doi.org/10.17116/terarkh2015871067-71
Martirosian NS, Burdennyi AM, Trukhina LV, Panteleeva OG, Saakyan SV, Petunina NA, Nosikov VV. Assotsiatsiya polimorfnykh markerov genov CTLA4 i TNF s endokrinnoi oftal'mopatiei u patsientov russkogo proiskhozhdeniya s bolezn'yu Greivsa. [Association of CTLA4 and TNF gene polymorphisms with endocrine ophthalmopathy in ethnic Russian patients with Graves' disease]. Ter Arkh. 2015;87(10):67-71. doi: 10.17116/terarkh2015871067-71. Russian. PMID: 26978177.
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Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin.

Journal of the American Chemical Society

Cirera B, Trukhina O, Björk J, Bottari G, Rodríguez-Fernández J, Martin-Jimenez A, Islyaikin MK, Otero R, Gallego JM, Miranda R, Torres T, Ecija D.
PMID: 28889740
J Am Chem Soc. 2017 Oct 11;139(40):14129-14136. doi: 10.1021/jacs.7b06406. Epub 2017 Sep 27.

Expanded porphyrins are large-cavity macrocycles with enormous potential in coordination chemistry, anion sensing, photodynamic therapy, and optoelectronics. In the last two decades, the surface science community has assessed the physicochemical properties of tetrapyrrolic-like macrocycles. However, to date, the sublimation,...

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Cirera B, Trukhina O, Björk J, et al. Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. J Am Chem Soc. 2017;139(40):14129-14136doi: 10.1021/jacs.7b06406.
Cirera, B., Trukhina, O., Björk, J., Bottari, G., Rodríguez-Fernández, J., Martin-Jimenez, A., Islyaikin, M. K., Otero, R., Gallego, J. M., Miranda, R., Torres, T., & Ecija, D. (2017). Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. Journal of the American Chemical Society, 139(40), 14129-14136. https://doi.org/10.1021/jacs.7b06406
Cirera, Borja, et al. "Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin." Journal of the American Chemical Society vol. 139,40 (2017): 14129-14136. doi: https://doi.org/10.1021/jacs.7b06406
Cirera B, Trukhina O, Björk J, Bottari G, Rodríguez-Fernández J, Martin-Jimenez A, Islyaikin MK, Otero R, Gallego JM, Miranda R, Torres T, Ecija D. Long-Range Orientational Self-Assembly, Spatially Controlled Deprotonation, and Off-Centered Metalation of an Expanded Porphyrin. J Am Chem Soc. 2017 Oct 11;139(40):14129-14136. doi: 10.1021/jacs.7b06406. Epub 2017 Sep 27. PMID: 28889740.
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Computer simulation study of a liquid crystal confined to a spherical cavity.

Physical review. E, Statistical, nonlinear, and soft matter physics

Trukhina Y, Schilling T.
PMID: 18351860
Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Jan;77(1):011701. doi: 10.1103/PhysRevE.77.011701. Epub 2008 Jan 07.

The interplay of surface ordering and elasticity can be studied on the example of a liquid crystal confined to a cavity. We present a computer simulation study of a liquid of hard spherocylinders in a hard spherical cavity. With...

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Trukhina Y, Schilling T. Computer simulation study of a liquid crystal confined to a spherical cavity. Phys Rev E Stat Nonlin Soft Matter Phys. 2008;77(1):011701doi: 10.1103/PhysRevE.77.011701.
Trukhina, Y., & Schilling, T. (2008). Computer simulation study of a liquid crystal confined to a spherical cavity. Physical review. E, Statistical, nonlinear, and soft matter physics, 77(1), 011701. https://doi.org/10.1103/PhysRevE.77.011701
Trukhina, Yu, and Schilling, T. "Computer simulation study of a liquid crystal confined to a spherical cavity." Physical review. E, Statistical, nonlinear, and soft matter physics vol. 77,1 (2008): 011701. doi: https://doi.org/10.1103/PhysRevE.77.011701
Trukhina Y, Schilling T. Computer simulation study of a liquid crystal confined to a spherical cavity. Phys Rev E Stat Nonlin Soft Matter Phys. 2008 Jan;77(1):011701. doi: 10.1103/PhysRevE.77.011701. Epub 2008 Jan 07. PMID: 18351860.
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De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes.

Biotechnology for biofuels

Weimann A, Trukhina Y, Pope PB, Konietzny SG, McHardy AC.
PMID: 23414703
Biotechnol Biofuels. 2013 Feb 15;6(1):24. doi: 10.1186/1754-6834-6-24.

BACKGROUND: Understanding the biological mechanisms used by microorganisms for plant biomass degradation is of considerable biotechnological interest. Despite of the growing number of sequenced (meta)genomes of plant biomass-degrading microbes, there is currently no technique for the systematic determination of...

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Weimann A, Trukhina Y, Pope PB, et al. De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes. Biotechnol Biofuels. 2013;6(1):24doi: 10.1186/1754-6834-6-24.
Weimann, A., Trukhina, Y., Pope, P. B., Konietzny, S. G., & McHardy, A. C. (2013). De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes. Biotechnology for biofuels, 6(1), 24. https://doi.org/10.1186/1754-6834-6-24
Weimann, Aaron, et al. "De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes." Biotechnology for biofuels vol. 6,1 (2013): 24. doi: https://doi.org/10.1186/1754-6834-6-24
Weimann A, Trukhina Y, Pope PB, Konietzny SG, McHardy AC. De novo prediction of the genomic components and capabilities for microbial plant biomass degradation from (meta-)genomes. Biotechnol Biofuels. 2013 Feb 15;6(1):24. doi: 10.1186/1754-6834-6-24. PMID: 23414703; PMCID: PMC3585893.
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Comprehensive Method for Culturing Embryonic Dorsal Root Ganglion Neurons for Seahorse Extracellular Flux XF24 Analysis.

Frontiers in neurology

Lange M, Zeng Y, Knight A, Windebank A, Trushina E.
PMID: 23248613
Front Neurol. 2012 Dec 14;3:175. doi: 10.3389/fneur.2012.00175. eCollection 2012.

Changes in mitochondrial dynamics and function contribute to progression of multiple neurodegenerative diseases including peripheral neuropathies. The Seahorse Extracellular Flux XF24 analyzer provides a comprehensive assessment of the relative state of glycolytic and aerobic metabolism in live cells making...

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Lange M, Zeng Y, Knight A, et al. Comprehensive Method for Culturing Embryonic Dorsal Root Ganglion Neurons for Seahorse Extracellular Flux XF24 Analysis. Front Neurol. 2012;3:175doi: 10.3389/fneur.2012.00175.
Lange, M., Zeng, Y., Knight, A., Windebank, A., & Trushina, E. (2012). Comprehensive Method for Culturing Embryonic Dorsal Root Ganglion Neurons for Seahorse Extracellular Flux XF24 Analysis. Frontiers in neurology, 3175. https://doi.org/10.3389/fneur.2012.00175
Lange, Miranda, et al. "Comprehensive Method for Culturing Embryonic Dorsal Root Ganglion Neurons for Seahorse Extracellular Flux XF24 Analysis." Frontiers in neurology vol. 3 (2012): 175. doi: https://doi.org/10.3389/fneur.2012.00175
Lange M, Zeng Y, Knight A, Windebank A, Trushina E. Comprehensive Method for Culturing Embryonic Dorsal Root Ganglion Neurons for Seahorse Extracellular Flux XF24 Analysis. Front Neurol. 2012 Dec 14;3:175. doi: 10.3389/fneur.2012.00175. eCollection 2012. PMID: 23248613; PMCID: PMC3522103.
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Corrigendum to "Modulation of mitochondrial complex I activity averts cognitive decline in multiple animal models of familial Alzheimer's disease" [EBioMedicine 2 (2015) 294-305].

EBioMedicine

Zhang L, Zhang S, Maezawa I, Trushin S, Minhas P, Pinto M, Jin LW, Prasain K, Nguyen TDT, Yamazaki Y, Kanekiyo T, Bu G, Gateno B, Chang KO, Nath KA, Nemutlu E, Dzeja P, Pang YP, Hua DH, Trushina E.
PMID: 30956174
EBioMedicine. 2019 Apr;42:532. doi: 10.1016/j.ebiom.2019.03.062. Epub 2019 Apr 04.

No abstract available.

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Zhang L, Zhang S, Maezawa I, et al. Corrigendum to "Modulation of mitochondrial complex I activity averts cognitive decline in multiple animal models of familial Alzheimer's disease" [EBioMedicine 2 (2015) 294-305]. EBioMedicine. 2019;42:532doi: 10.1016/j.ebiom.2019.03.062.
Zhang, L., Zhang, S., Maezawa, I., Trushin, S., Minhas, P., Pinto, M., Jin, L. W., Prasain, K., Nguyen, T. D. T., Yamazaki, Y., Kanekiyo, T., Bu, G., Gateno, B., Chang, K. O., Nath, K. A., Nemutlu, E., Dzeja, P., Pang, Y. P., Hua, D. H., & Trushina, E. (2019). Corrigendum to "Modulation of mitochondrial complex I activity averts cognitive decline in multiple animal models of familial Alzheimer's disease" [EBioMedicine 2 (2015) 294-305]. EBioMedicine, 42532. https://doi.org/10.1016/j.ebiom.2019.03.062
Zhang, Liang, et al. "Corrigendum to "Modulation of mitochondrial complex I activity averts cognitive decline in multiple animal models of familial Alzheimer's disease" [EBioMedicine 2 (2015) 294-305]." EBioMedicine vol. 42 (2019): 532. doi: https://doi.org/10.1016/j.ebiom.2019.03.062
Zhang L, Zhang S, Maezawa I, Trushin S, Minhas P, Pinto M, Jin LW, Prasain K, Nguyen TDT, Yamazaki Y, Kanekiyo T, Bu G, Gateno B, Chang KO, Nath KA, Nemutlu E, Dzeja P, Pang YP, Hua DH, Trushina E. Corrigendum to "Modulation of mitochondrial complex I activity averts cognitive decline in multiple animal models of familial Alzheimer's disease" [EBioMedicine 2 (2015) 294-305]. EBioMedicine. 2019 Apr;42:532. doi: 10.1016/j.ebiom.2019.03.062. Epub 2019 Apr 04. PMID: 30956174; PMCID: PMC6491797.
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Electron-cyclotron-current-drive experiments in the DIII-D tokamak.

Physical review. A, Atomic, molecular, and optical physics

de Gentile B, Fyakhretdinov A, Giruzzi G, Gorelov Y, Harvey R, James RA, Janz S, Lohr J, Luce TC, Matsuda K, Moeller CP, Prater R, Rodriguez L, Snider R, Trukhin V.
PMID: 9906977
Phys Rev A. 1992 Jun 15;45(12):8783-8786. doi: 10.1103/physreva.45.8783.

No abstract available.

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de Gentile B, Fyakhretdinov A, Giruzzi G, et al. Electron-cyclotron-current-drive experiments in the DIII-D tokamak. Phys Rev A. 1992;45(12):8783-8786doi: 10.1103/physreva.45.8783.
de Gentile B, Fyakhretdinov, A., Giruzzi, G., Gorelov, Y., Harvey, R., James, R. A., Janz, S., Lohr, J., Luce, T. C., Matsuda, K., Moeller, C. P., Prater, R., Rodriguez, L., Snider, R., & Trukhin, V. (1992). Electron-cyclotron-current-drive experiments in the DIII-D tokamak. Physical review. A, Atomic, molecular, and optical physics, 45(12), 8783-8786. https://doi.org/10.1103/physreva.45.8783
de Gentile B, et al. "Electron-cyclotron-current-drive experiments in the DIII-D tokamak." Physical review. A, Atomic, molecular, and optical physics vol. 45,12 (1992): 8783-8786. doi: https://doi.org/10.1103/physreva.45.8783
de Gentile B, Fyakhretdinov A, Giruzzi G, Gorelov Y, Harvey R, James RA, Janz S, Lohr J, Luce TC, Matsuda K, Moeller CP, Prater R, Rodriguez L, Snider R, Trukhin V. Electron-cyclotron-current-drive experiments in the DIII-D tokamak. Phys Rev A. 1992 Jun 15;45(12):8783-8786. doi: 10.1103/physreva.45.8783. PMID: 9906977.
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A genome-wide association study in human lymphoblastoid cells supports safety of mitochondrial complex I inhibitor.

Mitochondrion

Gao H, Tripathi U, Trushin S, Okromelidze L, Pichurin NP, Wei L, Zhuang Y, Wang L, Trushina E.
PMID: 33610756
Mitochondrion. 2021 May;58:83-94. doi: 10.1016/j.mito.2021.02.005. Epub 2021 Feb 19.

Novel therapeutic strategies for Alzheimer's disease (AD) are of the greatest priority given the consistent failure of recent clinical trials focused on Aβ or pTau. Earlier, we demonstrated that mild mitochondrial complex I inhibitor CP2 blocks neurodegeneration and cognitive...

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Gao H, Tripathi U, Trushin S, et al. A genome-wide association study in human lymphoblastoid cells supports safety of mitochondrial complex I inhibitor. Mitochondrion. 2021;58:83-94doi: 10.1016/j.mito.2021.02.005.
Gao, H., Tripathi, U., Trushin, S., Okromelidze, L., Pichurin, N. P., Wei, L., Zhuang, Y., Wang, L., & Trushina, E. (2021). A genome-wide association study in human lymphoblastoid cells supports safety of mitochondrial complex I inhibitor. Mitochondrion, 5883-94. https://doi.org/10.1016/j.mito.2021.02.005
Gao, Huanyao, et al. "A genome-wide association study in human lymphoblastoid cells supports safety of mitochondrial complex I inhibitor." Mitochondrion vol. 58 (2021): 83-94. doi: https://doi.org/10.1016/j.mito.2021.02.005
Gao H, Tripathi U, Trushin S, Okromelidze L, Pichurin NP, Wei L, Zhuang Y, Wang L, Trushina E. A genome-wide association study in human lymphoblastoid cells supports safety of mitochondrial complex I inhibitor. Mitochondrion. 2021 May;58:83-94. doi: 10.1016/j.mito.2021.02.005. Epub 2021 Feb 19. PMID: 33610756; PMCID: PMC8743030.
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A Two Step Postsynthetic Modification Strategy: Appending Short Chain Polyamines to Zn-NH.

Inorganic chemistry

Justin A, Espín J, Kochetygov I, Asgari M, Trukhina O, Queen WL.
PMID: 34264652
Inorg Chem. 2021 Aug 16;60(16):11720-11729. doi: 10.1021/acs.inorgchem.1c01216. Epub 2021 Jul 15.

Functionalizing metal-organic frameworks (MOFs) with amines is a commonly used strategy to enhance their performance in CO

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Justin A, Espín J, Kochetygov I, et al. A Two Step Postsynthetic Modification Strategy: Appending Short Chain Polyamines to Zn-NH. Inorg Chem. 2021;60(16):11720-11729doi: 10.1021/acs.inorgchem.1c01216.
Justin, A., Espín, J., Kochetygov, I., Asgari, M., Trukhina, O., & Queen, W. L. (2021). A Two Step Postsynthetic Modification Strategy: Appending Short Chain Polyamines to Zn-NH. Inorganic chemistry, 60(16), 11720-11729. https://doi.org/10.1021/acs.inorgchem.1c01216
Justin, Anita, et al. "A Two Step Postsynthetic Modification Strategy: Appending Short Chain Polyamines to Zn-NH." Inorganic chemistry vol. 60,16 (2021): 11720-11729. doi: https://doi.org/10.1021/acs.inorgchem.1c01216
Justin A, Espín J, Kochetygov I, Asgari M, Trukhina O, Queen WL. A Two Step Postsynthetic Modification Strategy: Appending Short Chain Polyamines to Zn-NH. Inorg Chem. 2021 Aug 16;60(16):11720-11729. doi: 10.1021/acs.inorgchem.1c01216. Epub 2021 Jul 15. PMID: 34264652.
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Correction: Migrations of young spotted seals (Phoca largha) from Peter the Great Bay, Sea of Japan/East Sea, and the pattern of their use of seasonal habitats.

PloS one

Trukhin AM, Permyakov PA, Ryazanov SD, Lobanov VB, Kim HW, Choi YM, Sohn H.
PMID: 34469492
PLoS One. 2021 Sep 01;16(9):e0257121. doi: 10.1371/journal.pone.0257121. eCollection 2021.

[This corrects the article DOI: 10.1371/journal.pone.0244232.].

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Trukhin AM, Permyakov PA, Ryazanov SD, et al. Correction: Migrations of young spotted seals (Phoca largha) from Peter the Great Bay, Sea of Japan/East Sea, and the pattern of their use of seasonal habitats. PLoS One. 2021;16(9):e0257121doi: 10.1371/journal.pone.0257121.
Trukhin, A. M., Permyakov, P. A., Ryazanov, S. D., Lobanov, V. B., Kim, H. W., Choi, Y. M., & Sohn, H. (2021). Correction: Migrations of young spotted seals (Phoca largha) from Peter the Great Bay, Sea of Japan/East Sea, and the pattern of their use of seasonal habitats. PloS one, 16(9), e0257121. https://doi.org/10.1371/journal.pone.0257121
Trukhin, Alexey M, et al. "Correction: Migrations of young spotted seals (Phoca largha) from Peter the Great Bay, Sea of Japan/East Sea, and the pattern of their use of seasonal habitats." PloS one vol. 16,9 (2021): e0257121. doi: https://doi.org/10.1371/journal.pone.0257121
Trukhin AM, Permyakov PA, Ryazanov SD, Lobanov VB, Kim HW, Choi YM, Sohn H. Correction: Migrations of young spotted seals (Phoca largha) from Peter the Great Bay, Sea of Japan/East Sea, and the pattern of their use of seasonal habitats. PLoS One. 2021 Sep 01;16(9):e0257121. doi: 10.1371/journal.pone.0257121. eCollection 2021. PMID: 34469492; PMCID: PMC8409639.
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Use of Microalgae Biomass for Fortification of Food Products from Grain.

Foods (Basel, Switzerland)

Bazarnova J, Nilova L, Trukhina E, Bernavskaya M, Smyatskaya Y, Aktar T.
PMID: 34945568
Foods. 2021 Dec 05;10(12). doi: 10.3390/foods10123018.

This article describes the use of

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Bazarnova J, Nilova L, Trukhina E, et al. Use of Microalgae Biomass for Fortification of Food Products from Grain. Foods. 2021;10(12)doi: 10.3390/foods10123018.
Bazarnova, J., Nilova, L., Trukhina, E., Bernavskaya, M., Smyatskaya, Y., & Aktar, T. (2021). Use of Microalgae Biomass for Fortification of Food Products from Grain. Foods (Basel, Switzerland), 10(12), . https://doi.org/10.3390/foods10123018
Bazarnova, Julia, et al. "Use of Microalgae Biomass for Fortification of Food Products from Grain." Foods (Basel, Switzerland) vol. 10,12 (2021). doi: https://doi.org/10.3390/foods10123018
Bazarnova J, Nilova L, Trukhina E, Bernavskaya M, Smyatskaya Y, Aktar T. Use of Microalgae Biomass for Fortification of Food Products from Grain. Foods. 2021 Dec 05;10(12). doi: 10.3390/foods10123018. PMID: 34945568.
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A metal-organic framework/polymer derived catalyst containing single-atom nickel species for electrocatalysis.

Chemical science

Yang S, Zhang J, Peng L, Asgari M, Stoian D, Kochetygov I, Luo W, Oveisi E, Trukhina O, Clark AH, Sun DT, Queen WL.
PMID: 34094347
Chem Sci. 2020 Sep 25;11(40):10991-10997. doi: 10.1039/d0sc04512h.

While metal-organic frameworks (MOF) alone offer a wide range of structural tunability, the formation of composites, through the introduction of other non-native species, like polymers, can further broaden their structure/property spectrum. Here we demonstrate that a polymer, placed inside...

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Yang S, Zhang J, Peng L, et al. A metal-organic framework/polymer derived catalyst containing single-atom nickel species for electrocatalysis. Chem Sci. 2020;11(40):10991-10997doi: 10.1039/d0sc04512h.
Yang, S., Zhang, J., Peng, L., Asgari, M., Stoian, D., Kochetygov, I., Luo, W., Oveisi, E., Trukhina, O., Clark, A. H., Sun, D. T., & Queen, W. L. (2020). A metal-organic framework/polymer derived catalyst containing single-atom nickel species for electrocatalysis. Chemical science, 11(40), 10991-10997. https://doi.org/10.1039/d0sc04512h
Yang, Shuliang, et al. "A metal-organic framework/polymer derived catalyst containing single-atom nickel species for electrocatalysis." Chemical science vol. 11,40 (2020): 10991-10997. doi: https://doi.org/10.1039/d0sc04512h
Yang S, Zhang J, Peng L, Asgari M, Stoian D, Kochetygov I, Luo W, Oveisi E, Trukhina O, Clark AH, Sun DT, Queen WL. A metal-organic framework/polymer derived catalyst containing single-atom nickel species for electrocatalysis. Chem Sci. 2020 Sep 25;11(40):10991-10997. doi: 10.1039/d0sc04512h. PMID: 34094347; PMCID: PMC8162436.
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