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Optimized multiplex immunofluorescence single-cell analysis reveals tuft cell heterogeneity.

JCI insight

McKinley ET, Sui Y, Al-Kofahi Y, Millis BA, Tyska MJ, Roland JT, Santamaria-Pang A, Ohland CL, Jobin C, Franklin JL, Lau KS, Gerdes MJ, Coffey RJ.
PMID: 28570279
JCI Insight. 2017 Jun 02;2(11). doi: 10.1172/jci.insight.93487. eCollection 2017 Jun 02.

Intestinal tuft cells are a rare, poorly understood cell type recently shown to be a critical mediator of type 2 immune response to helminth infection. Here, we present advances in segmentation algorithms and analytical tools for multiplex immunofluorescence (MxIF),...

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McKinley ET, Sui Y, Al-Kofahi Y, et al. Optimized multiplex immunofluorescence single-cell analysis reveals tuft cell heterogeneity. JCI Insight. 2017;2(11)doi: 10.1172/jci.insight.93487.
McKinley, E. T., Sui, Y., Al-Kofahi, Y., Millis, B. A., Tyska, M. J., Roland, J. T., Santamaria-Pang, A., Ohland, C. L., Jobin, C., Franklin, J. L., Lau, K. S., Gerdes, M. J., & Coffey, R. J. (2017). Optimized multiplex immunofluorescence single-cell analysis reveals tuft cell heterogeneity. JCI insight, 2(11), . https://doi.org/10.1172/jci.insight.93487
McKinley, Eliot T, et al. "Optimized multiplex immunofluorescence single-cell analysis reveals tuft cell heterogeneity." JCI insight vol. 2,11 (2017). doi: https://doi.org/10.1172/jci.insight.93487
McKinley ET, Sui Y, Al-Kofahi Y, Millis BA, Tyska MJ, Roland JT, Santamaria-Pang A, Ohland CL, Jobin C, Franklin JL, Lau KS, Gerdes MJ, Coffey RJ. Optimized multiplex immunofluorescence single-cell analysis reveals tuft cell heterogeneity. JCI Insight. 2017 Jun 02;2(11). doi: 10.1172/jci.insight.93487. eCollection 2017 Jun 02. PMID: 28570279; PMCID: PMC5453701.
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The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study.

Frontiers in neuroanatomy

Park S, Tyszka JM, Allman JM.
PMID: 22707933
Front Neuroanat. 2012 Jun 11;6:21. doi: 10.3389/fnana.2012.00021. eCollection 2012.

The claustrum and the insula are closely juxtaposed in the brain of the prosimian primate, the gray mouse lemur (Microcebus murinus). Whether the claustrum has closer affinities with the cortex or the striatum has been debated for many decades....

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Park S, Tyszka JM, Allman JM. The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study. Front Neuroanat. 2012;6:21doi: 10.3389/fnana.2012.00021.
Park, S., Tyszka, J. M., & Allman, J. M. (2012). The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study. Frontiers in neuroanatomy, 621. https://doi.org/10.3389/fnana.2012.00021
Park, Soyoung, et al. "The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study." Frontiers in neuroanatomy vol. 6 (2012): 21. doi: https://doi.org/10.3389/fnana.2012.00021
Park S, Tyszka JM, Allman JM. The Claustrum and Insula in Microcebus murinus: A High Resolution Diffusion Imaging Study. Front Neuroanat. 2012 Jun 11;6:21. doi: 10.3389/fnana.2012.00021. eCollection 2012. PMID: 22707933; PMCID: PMC3374366.
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The electronic health record as a patient engagement tool: mirroring clinicians' screen to create a shared mental model.

JAMIA open

Asan O, Tyszka J, Crotty B.
PMID: 31984318
JAMIA Open. 2018 Apr 20;1(1):42-48. doi: 10.1093/jamiaopen/ooy006. eCollection 2018 Jul.

OBJECTIVE: Electronic health records (EHRs) in physician offices can both enhance and detract from the patient experience. Best practices have emerged focusing on screen sharing. We sought to determine if adding a second monitor, mirroring the EHR for patients,...

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Asan O, Tyszka J, Crotty B. The electronic health record as a patient engagement tool: mirroring clinicians' screen to create a shared mental model. JAMIA Open. 2018;1(1):42-48doi: 10.1093/jamiaopen/ooy006.
Asan, O., Tyszka, J., & Crotty, B. (2018). The electronic health record as a patient engagement tool: mirroring clinicians' screen to create a shared mental model. JAMIA open, 1(1), 42-48. https://doi.org/10.1093/jamiaopen/ooy006
Asan, Onur, et al. "The electronic health record as a patient engagement tool: mirroring clinicians' screen to create a shared mental model." JAMIA open vol. 1,1 (2018): 42-48. doi: https://doi.org/10.1093/jamiaopen/ooy006
Asan O, Tyszka J, Crotty B. The electronic health record as a patient engagement tool: mirroring clinicians' screen to create a shared mental model. JAMIA Open. 2018 Apr 20;1(1):42-48. doi: 10.1093/jamiaopen/ooy006. eCollection 2018 Jul. PMID: 31984318; PMCID: PMC6952027.
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Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents.

Psychoneuroendocrinology

Campbell CE, Mezher AF, Tyszka JM, Nagel BJ, Eckel SP, Herting MM.
PMID: 34971856
Psychoneuroendocrinology. 2021 Nov 24;137:105604. doi: 10.1016/j.psyneuen.2021.105604. Epub 2021 Nov 24.

Much is known about the development of the whole amygdala, but less is known about its structurally and functionally diverse subregions. One notable distinguishing feature is their wide range of androgen and estrogen receptor densities. Given the rise in...

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Campbell CE, Mezher AF, Tyszka JM, et al. Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents. Psychoneuroendocrinology. 2021;137:105604doi: 10.1016/j.psyneuen.2021.105604.
Campbell, C. E., Mezher, A. F., Tyszka, J. M., Nagel, B. J., Eckel, S. P., & Herting, M. M. (2021). Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents. Psychoneuroendocrinology, 137105604. https://doi.org/10.1016/j.psyneuen.2021.105604
Campbell, Claire E, et al. "Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents." Psychoneuroendocrinology vol. 137 (2021): 105604. doi: https://doi.org/10.1016/j.psyneuen.2021.105604
Campbell CE, Mezher AF, Tyszka JM, Nagel BJ, Eckel SP, Herting MM. Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents. Psychoneuroendocrinology. 2021 Nov 24;137:105604. doi: 10.1016/j.psyneuen.2021.105604. Epub 2021 Nov 24. PMID: 34971856.
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Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents.

Psychoneuroendocrinology

Campbell CE, Mezher AF, Tyszka JM, Nagel BJ, Eckel SP, Herting MM.
PMID: 34971856
Psychoneuroendocrinology. 2021 Nov 24;137:105604. doi: 10.1016/j.psyneuen.2021.105604. Epub 2021 Nov 24.

Much is known about the development of the whole amygdala, but less is known about its structurally and functionally diverse subregions. One notable distinguishing feature is their wide range of androgen and estrogen receptor densities. Given the rise in...

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Campbell CE, Mezher AF, Tyszka JM, et al. Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents. Psychoneuroendocrinology. 2021;137:105604doi: 10.1016/j.psyneuen.2021.105604.
Campbell, C. E., Mezher, A. F., Tyszka, J. M., Nagel, B. J., Eckel, S. P., & Herting, M. M. (2021). Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents. Psychoneuroendocrinology, 137105604. https://doi.org/10.1016/j.psyneuen.2021.105604
Campbell, Claire E, et al. "Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents." Psychoneuroendocrinology vol. 137 (2021): 105604. doi: https://doi.org/10.1016/j.psyneuen.2021.105604
Campbell CE, Mezher AF, Tyszka JM, Nagel BJ, Eckel SP, Herting MM. Associations between testosterone, estradiol, and androgen receptor genotype with amygdala subregions in adolescents. Psychoneuroendocrinology. 2021 Nov 24;137:105604. doi: 10.1016/j.psyneuen.2021.105604. Epub 2021 Nov 24. PMID: 34971856.
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A protocol for imaging microvilli biogenesis on the surface of cultured porcine kidney epithelial cell monolayers.

STAR protocols

Gaeta IM, Meenderink LM, Tyska MJ.
PMID: 34950883
STAR Protoc. 2021 Dec 10;2(4):100998. doi: 10.1016/j.xpro.2021.100998. eCollection 2021 Dec 17.

A key facet of epithelial differentiation is the assembly of actin-based protrusions known as microvilli, which amplify apical membrane surface area for various cell functions. To probe mechanisms of microvillus assembly, we developed a protocol using spinning disk confocal...

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Gaeta IM, Meenderink LM, Tyska MJ. A protocol for imaging microvilli biogenesis on the surface of cultured porcine kidney epithelial cell monolayers. STAR Protoc. 2021;2(4):100998doi: 10.1016/j.xpro.2021.100998.
Gaeta, I. M., Meenderink, L. M., & Tyska, M. J. (2021). A protocol for imaging microvilli biogenesis on the surface of cultured porcine kidney epithelial cell monolayers. STAR protocols, 2(4), 100998. https://doi.org/10.1016/j.xpro.2021.100998
Gaeta, Isabella M, et al. "A protocol for imaging microvilli biogenesis on the surface of cultured porcine kidney epithelial cell monolayers." STAR protocols vol. 2,4 (2021): 100998. doi: https://doi.org/10.1016/j.xpro.2021.100998
Gaeta IM, Meenderink LM, Tyska MJ. A protocol for imaging microvilli biogenesis on the surface of cultured porcine kidney epithelial cell monolayers. STAR Protoc. 2021 Dec 10;2(4):100998. doi: 10.1016/j.xpro.2021.100998. eCollection 2021 Dec 17. PMID: 34950883; PMCID: PMC8672049.
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Microstructural properties within the amygdala and affiliated white matter tracts across adolescence.

NeuroImage

Azad A, Cabeen RP, Sepehrband F, Kim R, Campbell CE, Lynch K, Tyszka JM, Herting MM.
PMID: 34450260
Neuroimage. 2021 Nov;243:118489. doi: 10.1016/j.neuroimage.2021.118489. Epub 2021 Aug 24.

The amygdala is a heterogenous set of nuclei with widespread cortical connections that continues to develop postnatally with vital implications for emotional regulation. Using high-resolution anatomical and multi-shell diffusion MRI in conjunction with novel amygdala segmentation, cutting-edge tractography, and...

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Azad A, Cabeen RP, Sepehrband F, et al. Microstructural properties within the amygdala and affiliated white matter tracts across adolescence. Neuroimage. 2021;243:118489doi: 10.1016/j.neuroimage.2021.118489.
Azad, A., Cabeen, R. P., Sepehrband, F., Kim, R., Campbell, C. E., Lynch, K., Tyszka, J. M., & Herting, M. M. (2021). Microstructural properties within the amygdala and affiliated white matter tracts across adolescence. NeuroImage, 243118489. https://doi.org/10.1016/j.neuroimage.2021.118489
Azad, Anisa, et al. "Microstructural properties within the amygdala and affiliated white matter tracts across adolescence." NeuroImage vol. 243 (2021): 118489. doi: https://doi.org/10.1016/j.neuroimage.2021.118489
Azad A, Cabeen RP, Sepehrband F, Kim R, Campbell CE, Lynch K, Tyszka JM, Herting MM. Microstructural properties within the amygdala and affiliated white matter tracts across adolescence. Neuroimage. 2021 Nov;243:118489. doi: 10.1016/j.neuroimage.2021.118489. Epub 2021 Aug 24. PMID: 34450260; PMCID: PMC8574981.
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Alcohol reduces aversion to ambiguity.

Frontiers in psychology

Tyszka T, Macko A, Stańczak M.
PMID: 25642202
Front Psychol. 2015 Jan 15;5:1578. doi: 10.3389/fpsyg.2014.01578. eCollection 2014.

Several years ago, Cohen et al. (1958) demonstrated that under the influence of alcohol drivers became more risk prone, although their risk perception remained unchanged. Research shows that ambiguity aversion is to some extent positively correlated with risk aversion,...

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Tyszka T, Macko A, Stańczak M. Alcohol reduces aversion to ambiguity. Front Psychol. 2015;5:1578doi: 10.3389/fpsyg.2014.01578.
Tyszka, T., Macko, A., & Stańczak, M. (2014). Alcohol reduces aversion to ambiguity. Frontiers in psychology, 51578. https://doi.org/10.3389/fpsyg.2014.01578
Tyszka, Tadeusz, et al. "Alcohol reduces aversion to ambiguity." Frontiers in psychology vol. 5 (2014): 1578. doi: https://doi.org/10.3389/fpsyg.2014.01578
Tyszka T, Macko A, Stańczak M. Alcohol reduces aversion to ambiguity. Front Psychol. 2015 Jan 15;5:1578. doi: 10.3389/fpsyg.2014.01578. eCollection 2014. PMID: 25642202; PMCID: PMC4295600.
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Navigated Single-Voxel Short-Echo-Time Proton Spectroscopy of Moving Objects.

Journal of magnetic resonance. Series B

Tyszka JM, Silverman JM.
PMID: 8812920
J Magn Reson B. 1996 Sep;112(3):302-6. doi: 10.1006/jmrb.1996.0146.

No abstract available.

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Tyszka JM, Silverman JM. Navigated Single-Voxel Short-Echo-Time Proton Spectroscopy of Moving Objects. J Magn Reson B. 1996;112(3):302-6doi: 10.1006/jmrb.1996.0146.
Tyszka, J. M., & Silverman, J. M. (1996). Navigated Single-Voxel Short-Echo-Time Proton Spectroscopy of Moving Objects. Journal of magnetic resonance. Series B, 112(3), 302-6. https://doi.org/10.1006/jmrb.1996.0146
Tyszka, and Silverman. "Navigated Single-Voxel Short-Echo-Time Proton Spectroscopy of Moving Objects." Journal of magnetic resonance. Series B vol. 112,3 (1996): 302-6. doi: https://doi.org/10.1006/jmrb.1996.0146
Tyszka JM, Silverman JM. Navigated Single-Voxel Short-Echo-Time Proton Spectroscopy of Moving Objects. J Magn Reson B. 1996 Sep;112(3):302-6. doi: 10.1006/jmrb.1996.0146. PMID: 8812920.
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Correction: Disruption of Rab8a and Rab11a causes formation of basolateral microvilli in neonatal enteropathy (doi: 10.1242/jcs.201897).

Journal of cell science

Feng Q, Bonder EM, Engevik AC, Zhang L, Tyska MJ, Goldenring JR, Gao N.
PMID: 30224429
J Cell Sci. 2018 Sep 17;131(18). doi: 10.1242/jcs.224535.

No abstract available.

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Feng Q, Bonder EM, Engevik AC, et al. Correction: Disruption of Rab8a and Rab11a causes formation of basolateral microvilli in neonatal enteropathy (doi: 10.1242/jcs.201897). J Cell Sci. 2018;131(18)doi: 10.1242/jcs.224535.
Feng, Q., Bonder, E. M., Engevik, A. C., Zhang, L., Tyska, M. J., Goldenring, J. R., & Gao, N. (2018). Correction: Disruption of Rab8a and Rab11a causes formation of basolateral microvilli in neonatal enteropathy (doi: 10.1242/jcs.201897). Journal of cell science, 131(18), . https://doi.org/10.1242/jcs.224535
Feng, Qiang, et al. "Correction: Disruption of Rab8a and Rab11a causes formation of basolateral microvilli in neonatal enteropathy (doi: 10.1242/jcs.201897)." Journal of cell science vol. 131,18 (2018). doi: https://doi.org/10.1242/jcs.224535
Feng Q, Bonder EM, Engevik AC, Zhang L, Tyska MJ, Goldenring JR, Gao N. Correction: Disruption of Rab8a and Rab11a causes formation of basolateral microvilli in neonatal enteropathy (doi: 10.1242/jcs.201897). J Cell Sci. 2018 Sep 17;131(18). doi: 10.1242/jcs.224535. PMID: 30224429; PMCID: PMC6295130.
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Evaluation of Atlas based Mouse Brain Segmentation.

Proceedings of SPIE--the International Society for Optical Engineering

Lee J, Jomier J, Aylward S, Tyszka M, Moy S, Lauder J, Styner M.
PMID: 20640188
Proc SPIE Int Soc Opt Eng. 2009 Feb 01;7259:725943-725949. doi: 10.1117/12.812762.

Magentic Reasonance Imaging for mouse phenotype study is one of the important tools to understand human diseases. In this paper, we present a fully automatic pipeline for the process of morphometric mouse brain analysis. The method is based on...

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Lee J, Jomier J, Aylward S, et al. Evaluation of Atlas based Mouse Brain Segmentation. Proc SPIE Int Soc Opt Eng. 2009;7259:725943-725949doi: 10.1117/12.812762.
Lee, J., Jomier, J., Aylward, S., Tyszka, M., Moy, S., Lauder, J., & Styner, M. (2009). Evaluation of Atlas based Mouse Brain Segmentation. Proceedings of SPIE--the International Society for Optical Engineering, 7259725943-725949. https://doi.org/10.1117/12.812762
Lee, Joohwi, et al. "Evaluation of Atlas based Mouse Brain Segmentation." Proceedings of SPIE--the International Society for Optical Engineering vol. 7259 (2009): 725943-725949. doi: https://doi.org/10.1117/12.812762
Lee J, Jomier J, Aylward S, Tyszka M, Moy S, Lauder J, Styner M. Evaluation of Atlas based Mouse Brain Segmentation. Proc SPIE Int Soc Opt Eng. 2009 Feb 01;7259:725943-725949. doi: 10.1117/12.812762. PMID: 20640188; PMCID: PMC2905053.
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Late-Stage Functionalization of ( R)-BINOL-Based Diazacoronands and Their Chiral Recognition of α-Phenylethylamine Hydrochlorides.

The Journal of organic chemistry

Tyszka A, Pikus G, Dąbrowa K, Jurczak J.
PMID: 31021634
J Org Chem. 2019 May 17;84(10):6502-6507. doi: 10.1021/acs.joc.9b00630. Epub 2019 May 06.

Five BINOL-based hosts with a variable macroring size were synthesized in a two-step postfunctionalization protocol by double N-benzylation followed by BMS-mediated reduction of tertiary amide groups (53-93%). UV-vis titration in MeCN reveals that all hosts exhibit a preference for...

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Tyszka A, Pikus G, Dąbrowa K, et al. Late-Stage Functionalization of ( R)-BINOL-Based Diazacoronands and Their Chiral Recognition of α-Phenylethylamine Hydrochlorides. J Org Chem. 2019;84(10):6502-6507doi: 10.1021/acs.joc.9b00630.
Tyszka, A., Pikus, G., Dąbrowa, K., & Jurczak, J. (2019). Late-Stage Functionalization of ( R)-BINOL-Based Diazacoronands and Their Chiral Recognition of α-Phenylethylamine Hydrochlorides. The Journal of organic chemistry, 84(10), 6502-6507. https://doi.org/10.1021/acs.joc.9b00630
Tyszka, Agata, et al. "Late-Stage Functionalization of ( R)-BINOL-Based Diazacoronands and Their Chiral Recognition of α-Phenylethylamine Hydrochlorides." The Journal of organic chemistry vol. 84,10 (2019): 6502-6507. doi: https://doi.org/10.1021/acs.joc.9b00630
Tyszka A, Pikus G, Dąbrowa K, Jurczak J. Late-Stage Functionalization of ( R)-BINOL-Based Diazacoronands and Their Chiral Recognition of α-Phenylethylamine Hydrochlorides. J Org Chem. 2019 May 17;84(10):6502-6507. doi: 10.1021/acs.joc.9b00630. Epub 2019 May 06. PMID: 31021634.
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Showing 1 to 12 of 41 entries