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Hyperdominance in Amazonian forest carbon cycling.

Nature communications

Fauset S, Johnson MO, Gloor M, Baker TR, Monteagudo M A, Brienen RJ, Feldpausch TR, Lopez-Gonzalez G, Malhi Y, ter Steege H, Pitman NC, Baraloto C, Engel J, Pétronelli P, Andrade A, Camargo JL, Laurance SG, Laurance WF, Chave J, Allie E, Vargas PN, Terborgh JW, Ruokolainen K, Silveira M, Aymard C GA, Arroyo L, Bonal D, Ramirez-Angulo H, Araujo-Murakami A, Neill D, Hérault B, Dourdain A, Torres-Lezama A, Marimon BS, Salomão RP, Comiskey JA, Réjou-Méchain M, Toledo M, Licona JC, Alarcón A, Prieto A, Rudas A, van der Meer PJ, Killeen TJ, Marimon Junior BH, Poorter L, Boot RG, Stergios B, Torre EV, Costa FR, Levis C, Schietti J, Souza P, Groot N, Arets E, Moscoso VC, Castro W, Coronado EN, Peña-Claros M, Stahl C, Barroso J, Talbot J, Vieira IC, van der Heijden G, Thomas R, Vos VA, Almeida EC, Davila EÁ, Aragão LE, Erwin TL, Morandi PS, de Oliveira EA, Valadão MB, Zagt RJ, van der Hout P, Loayza PA, Pipoly JJ, Wang O, Alexiades M, Cerón CE, Huamantupa-Chuquimaco I, Di Fiore A, Peacock J, Camacho NC, Umetsu RK, de Camargo PB, Burnham RJ, Herrera R, Quesada CA, Stropp J, Vieira SA, Steininger M, Rodríguez CR, Restrepo Z, Muelbert AE, Lewis SL, Pickavance GC, Phillips OL.
PMID: 25919449
Nat Commun. 2015 Apr 28;6:6857. doi: 10.1038/ncomms7857.

While Amazonian forests are extraordinarily diverse, the abundance of trees is skewed strongly towards relatively few 'hyperdominant' species. In addition to their diversity, Amazonian trees are a key component of the global carbon cycle, assimilating and storing more carbon...

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Fauset S, Johnson MO, Gloor M, et al. Hyperdominance in Amazonian forest carbon cycling. Nat Commun. 2015;6:6857doi: 10.1038/ncomms7857.
Fauset, S., Johnson, M. O., Gloor, M., Baker, T. R., Monteagudo M, A., Brienen, R. J., Feldpausch, T. R., Lopez-Gonzalez, G., Malhi, Y., ter Steege, H., Pitman, N. C., Baraloto, C., Engel, J., Pétronelli, P., Andrade, A., Camargo, J. L., Laurance, S. G., Laurance, W. F., Chave, J., Allie, E., Vargas, P. N., Terborgh, J. W., Ruokolainen, K., Silveira, M., Aymard C, G. A., Arroyo, L., Bonal, D., Ramirez-Angulo, H., Araujo-Murakami, A., Neill, D., Hérault, B., Dourdain, A., Torres-Lezama, A., Marimon, B. S., Salomão, R. P., Comiskey, J. A., Réjou-Méchain, M., Toledo, M., Licona, J. C., Alarcón, A., Prieto, A., Rudas, A., van der Meer, P. J., Killeen, T. J., Marimon Junior, B. H., Poorter, L., Boot, R. G., Stergios, B., Torre, E. V., Costa, F. R., Levis, C., Schietti, J., Souza, P., Groot, N., Arets, E., Moscoso, V. C., Castro, W., Coronado, E. N., Peña-Claros, M., Stahl, C., Barroso, J., Talbot, J., Vieira, I. C., van der Heijden, G., Thomas, R., Vos, V. A., Almeida, E. C., Davila, E. �. �., Aragão, L. E., Erwin, T. L., Morandi, P. S., de Oliveira, E. A., Valadão, M. B., Zagt, R. J., van der Hout, P., Loayza, P. A., Pipoly, J. J., Wang, O., Alexiades, M., Cerón, C. E., Huamantupa-Chuquimaco, I., Di Fiore, A., Peacock, J., Camacho, N. C., Umetsu, R. K., de Camargo, P. B., Burnham, R. J., Herrera, R., Quesada, C. A., Stropp, J., Vieira, S. A., Steininger, M., Rodríguez, C. R., Restrepo, Z., Muelbert, A. E., Lewis, S. L., Pickavance, G. C., & Phillips, O. L. (2015). Hyperdominance in Amazonian forest carbon cycling. Nature communications, 66857. https://doi.org/10.1038/ncomms7857
Fauset, Sophie, et al. "Hyperdominance in Amazonian forest carbon cycling." Nature communications vol. 6 (2015): 6857. doi: https://doi.org/10.1038/ncomms7857
Fauset S, Johnson MO, Gloor M, Baker TR, Monteagudo M A, Brienen RJ, Feldpausch TR, Lopez-Gonzalez G, Malhi Y, ter Steege H, Pitman NC, Baraloto C, Engel J, Pétronelli P, Andrade A, Camargo JL, Laurance SG, Laurance WF, Chave J, Allie E, Vargas PN, Terborgh JW, Ruokolainen K, Silveira M, Aymard C GA, Arroyo L, Bonal D, Ramirez-Angulo H, Araujo-Murakami A, Neill D, Hérault B, Dourdain A, Torres-Lezama A, Marimon BS, Salomão RP, Comiskey JA, Réjou-Méchain M, Toledo M, Licona JC, Alarcón A, Prieto A, Rudas A, van der Meer PJ, Killeen TJ, Marimon Junior BH, Poorter L, Boot RG, Stergios B, Torre EV, Costa FR, Levis C, Schietti J, Souza P, Groot N, Arets E, Moscoso VC, Castro W, Coronado EN, Peña-Claros M, Stahl C, Barroso J, Talbot J, Vieira IC, van der Heijden G, Thomas R, Vos VA, Almeida EC, Davila EÁ, Aragão LE, Erwin TL, Morandi PS, de Oliveira EA, Valadão MB, Zagt RJ, van der Hout P, Loayza PA, Pipoly JJ, Wang O, Alexiades M, Cerón CE, Huamantupa-Chuquimaco I, Di Fiore A, Peacock J, Camacho NC, Umetsu RK, de Camargo PB, Burnham RJ, Herrera R, Quesada CA, Stropp J, Vieira SA, Steininger M, Rodríguez CR, Restrepo Z, Muelbert AE, Lewis SL, Pickavance GC, Phillips OL. Hyperdominance in Amazonian forest carbon cycling. Nat Commun. 2015 Apr 28;6:6857. doi: 10.1038/ncomms7857. PMID: 25919449; PMCID: PMC4423203.
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Change point models for cognitive tests using semi-parametric maximum likelihood.

Computational statistics & data analysis

van den Hout A, Muniz-Terrera G, Matthews FE.
PMID: 23471297
Comput Stat Data Anal. 2013 Jan;57(1):684-698. doi: 10.1016/j.csda.2012.07.024.

Random-effects change point models are formulated for longitudinal data obtained from cognitive tests. The conditional distribution of the response variable in a change point model is often assumed to be normal even if the response variable is discrete and...

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van den Hout A, Muniz-Terrera G, Matthews FE. Change point models for cognitive tests using semi-parametric maximum likelihood. Comput Stat Data Anal. 2013;57(1):684-698doi: 10.1016/j.csda.2012.07.024.
van den Hout, A., Muniz-Terrera, G., & Matthews, F. E. (2013). Change point models for cognitive tests using semi-parametric maximum likelihood. Computational statistics & data analysis, 57(1), 684-698. https://doi.org/10.1016/j.csda.2012.07.024
van den Hout, Ardo, et al. "Change point models for cognitive tests using semi-parametric maximum likelihood." Computational statistics & data analysis vol. 57,1 (2013): 684-698. doi: https://doi.org/10.1016/j.csda.2012.07.024
van den Hout A, Muniz-Terrera G, Matthews FE. Change point models for cognitive tests using semi-parametric maximum likelihood. Comput Stat Data Anal. 2013 Jan;57(1):684-698. doi: 10.1016/j.csda.2012.07.024. PMID: 23471297; PMCID: PMC3587404.
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Phenotypic characterization of patients with deletions in the 3'-flanking SHOX region.

PeerJ

Kant SG, Broekman SJ, de Wit CC, Bos M, Scheltinga SA, Bakker E, Oostdijk W, van der Kamp HJ, van Zwet EW, van der Hout AH, Wit JM, Losekoot M.
PMID: 23638371
PeerJ. 2013 Feb 19;1:e35. doi: 10.7717/peerj.35. Print 2013.

Context. Leri-Weill dyschondrosteosis is a clinically variable skeletal dysplasia, caused by SHOX deletion or mutations, or a deletion of enhancer sequences in the 3'-flanking region. Recently, a 47.5 kb recurrent PAR1 deletion downstream of SHOX was reported, but its...

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Kant SG, Broekman SJ, de Wit CC, et al. Phenotypic characterization of patients with deletions in the 3'-flanking SHOX region. PeerJ. 2013;1:e35doi: 10.7717/peerj.35.
Kant, S. G., Broekman, S. J., de Wit, C. C., Bos, M., Scheltinga, S. A., Bakker, E., Oostdijk, W., van der Kamp, H. J., van Zwet, E. W., van der Hout, A. H., Wit, J. M., & Losekoot, M. (2013). Phenotypic characterization of patients with deletions in the 3'-flanking SHOX region. PeerJ, 1e35. https://doi.org/10.7717/peerj.35
Kant, Sarina G, et al. "Phenotypic characterization of patients with deletions in the 3'-flanking SHOX region." PeerJ vol. 1 (2013): e35. doi: https://doi.org/10.7717/peerj.35
Kant SG, Broekman SJ, de Wit CC, Bos M, Scheltinga SA, Bakker E, Oostdijk W, van der Kamp HJ, van Zwet EW, van der Hout AH, Wit JM, Losekoot M. Phenotypic characterization of patients with deletions in the 3'-flanking SHOX region. PeerJ. 2013 Feb 19;1:e35. doi: 10.7717/peerj.35. Print 2013. PMID: 23638371; PMCID: PMC3629036.
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Families with BAP1-Tumor Predisposition Syndrome in The Netherlands: Path to Identification and a Proposal for Genetic Screening Guidelines.

Cancers

Chau C, van Doorn R, van Poppelen NM, van der Stoep N, Mensenkamp AR, Sijmons RH, van Paassen BW, van den Ouweland AMW, Naus NC, van der Hout AH, Potjer TP, Bleeker FE, Wevers MR, van Hest LP, Jongmans MCJ, Marinkovic M, Bleeker JC, Jager MJ, Luyten GPM, Nielsen M.
PMID: 31382694
Cancers (Basel). 2019 Aug 04;11(8). doi: 10.3390/cancers11081114.

Germline pathogenic variants in the BRCA1-associated protein-1 (

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Chau C, van Doorn R, van Poppelen NM, et al. Families with BAP1-Tumor Predisposition Syndrome in The Netherlands: Path to Identification and a Proposal for Genetic Screening Guidelines. Cancers (Basel). 2019;11(8)doi: 10.3390/cancers11081114.
Chau, C., van Doorn, R., van Poppelen, N. M., van der Stoep, N., Mensenkamp, A. R., Sijmons, R. H., van Paassen, B. W., van den Ouweland, A. M. W., Naus, N. C., van der Hout, A. H., Potjer, T. P., Bleeker, F. E., Wevers, M. R., van Hest, L. P., Jongmans, M. C. J., Marinkovic, M., Bleeker, J. C., Jager, M. J., Luyten, G. P. M., & Nielsen, M. (2019). Families with BAP1-Tumor Predisposition Syndrome in The Netherlands: Path to Identification and a Proposal for Genetic Screening Guidelines. Cancers, 11(8), . https://doi.org/10.3390/cancers11081114
Chau, Cindy, et al. "Families with BAP1-Tumor Predisposition Syndrome in The Netherlands: Path to Identification and a Proposal for Genetic Screening Guidelines." Cancers vol. 11,8 (2019). doi: https://doi.org/10.3390/cancers11081114
Chau C, van Doorn R, van Poppelen NM, van der Stoep N, Mensenkamp AR, Sijmons RH, van Paassen BW, van den Ouweland AMW, Naus NC, van der Hout AH, Potjer TP, Bleeker FE, Wevers MR, van Hest LP, Jongmans MCJ, Marinkovic M, Bleeker JC, Jager MJ, Luyten GPM, Nielsen M. Families with BAP1-Tumor Predisposition Syndrome in The Netherlands: Path to Identification and a Proposal for Genetic Screening Guidelines. Cancers (Basel). 2019 Aug 04;11(8). doi: 10.3390/cancers11081114. PMID: 31382694; PMCID: PMC6721807.
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Expanding the .

Neurology. Genetics

Waalkens AJE, Vansenne F, van der Hout AH, Zutt R, Mourmans J, Tolosa E, de Koning TJ, Tijssen MAJ.
PMID: 29473048
Neurol Genet. 2018 Jan 24;4(1):e214. doi: 10.1212/NXG.0000000000000214. eCollection 2018 Feb.

No abstract available.

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Waalkens AJE, Vansenne F, van der Hout AH, et al. Expanding the . Neurol Genet. 2018;4(1):e214doi: 10.1212/NXG.0000000000000214.
Waalkens, A. J. E., Vansenne, F., van der Hout, A. H., Zutt, R., Mourmans, J., Tolosa, E., de Koning, T. J., & Tijssen, M. A. J. (2018). Expanding the . Neurology. Genetics, 4(1), e214. https://doi.org/10.1212/NXG.0000000000000214
Waalkens, Anne J E, et al. "Expanding the ." Neurology. Genetics vol. 4,1 (2018): e214. doi: https://doi.org/10.1212/NXG.0000000000000214
Waalkens AJE, Vansenne F, van der Hout AH, Zutt R, Mourmans J, Tolosa E, de Koning TJ, Tijssen MAJ. Expanding the . Neurol Genet. 2018 Jan 24;4(1):e214. doi: 10.1212/NXG.0000000000000214. eCollection 2018 Feb. PMID: 29473048; PMCID: PMC5820596.
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Corrigendum to: The ethics of preconception expanded carrier screening in patients seeking assisted reproduction.

Human reproduction open

de Wert G, van der Hout S, Goddijn M, Vassena R, Frith L, Vermeulen N, Eichenlaub-Ritter U.
PMID: 33937529
Hum Reprod Open. 2021 Apr 17;2021(2):hoab014. doi: 10.1093/hropen/hoab014. eCollection 2021.

[This corrects the article DOI: 10.1093/hropen/hoaa063.].

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de Wert G, van der Hout S, Goddijn M, et al. Corrigendum to: The ethics of preconception expanded carrier screening in patients seeking assisted reproduction. Hum Reprod Open. 2021;2021(2):hoab014doi: 10.1093/hropen/hoab014.
de Wert, G., van der Hout, S., Goddijn, M., Vassena, R., Frith, L., Vermeulen, N., & Eichenlaub-Ritter, U. (2021). Corrigendum to: The ethics of preconception expanded carrier screening in patients seeking assisted reproduction. Human reproduction open, 2021(2), hoab014. https://doi.org/10.1093/hropen/hoab014
de Wert, Guido, et al. "Corrigendum to: The ethics of preconception expanded carrier screening in patients seeking assisted reproduction." Human reproduction open vol. 2021,2 (2021): hoab014. doi: https://doi.org/10.1093/hropen/hoab014
de Wert G, van der Hout S, Goddijn M, Vassena R, Frith L, Vermeulen N, Eichenlaub-Ritter U. Corrigendum to: The ethics of preconception expanded carrier screening in patients seeking assisted reproduction. Hum Reprod Open. 2021 Apr 17;2021(2):hoab014. doi: 10.1093/hropen/hoab014. eCollection 2021. PMID: 33937529; PMCID: PMC8074575.
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Polygenic risk modeling for prediction of epithelial ovarian cancer risk.

European journal of human genetics : EJHG

Dareng EO, Tyrer JP, Barnes DR, Jones MR, Yang X, Aben KKH, Adank MA, Agata S, Andrulis IL, Anton-Culver H, Antonenkova NN, Aravantinos G, Arun BK, Augustinsson A, Balmaña J, Bandera EV, Barkardottir RB, Barrowdale D, Beckmann MW, Beeghly-Fadiel A, Benitez J, Bermisheva M, Bernardini MQ, Bjorge L, Black A, Bogdanova NV, Bonanni B, Borg A, Brenton JD, Budzilowska A, Butzow R, Buys SS, Cai H, Caligo MA, Campbell I, Cannioto R, Cassingham H, Chang-Claude J, Chanock SJ, Chen K, Chiew YE, Chung WK, Claes KBM, Colonna S, Cook LS, Couch FJ, Daly MB, Dao F, Davies E, de la Hoya M, de Putter R, Dennis J, DePersia A, Devilee P, Diez O, Ding YC, Doherty JA, Domchek SM, Dörk T, du Bois A, Dürst M, Eccles DM, Eliassen HA, Engel C, Evans GD, Fasching PA, Flanagan JM, Fortner RT, Machackova E, Friedman E, Ganz PA, Garber J, Gensini F, Giles GG, Glendon G, Godwin AK, Goodman MT, Greene MH, Gronwald J, Hahnen E, Haiman CA, Håkansson N, Hamann U, Hansen TVO, Harris HR, Hartman M, Heitz F, Hildebrandt MAT, Høgdall E, Høgdall CK, Hopper JL, Huang RY, Huff C, Hulick PJ, Huntsman DG, Imyanitov EN, Isaacs C, Jakubowska A, James PA, Janavicius R, Jensen A, Johannsson OT, John EM, Jones ME, Kang D, Karlan BY, Karnezis A, Kelemen LE, Khusnutdinova E, Kiemeney LA, Kim BG, Kjaer SK, Komenaka I, Kupryjanczyk J, Kurian AW, Kwong A, Lambrechts D, Larson MC, Lazaro C, Le ND, Leslie G, Lester J, Lesueur F, Levine DA, Li L, Li J, Loud JT, Lu KH, Lubiński J, Mai PL, Manoukian S, Marks JR, Matsuno RK, Matsuo K, May T, McGuffog L, McLaughlin JR, McNeish IA, Mebirouk N, Menon U, Miller A, Milne RL, Minlikeeva A, Modugno F, Montagna M, Moysich KB, Munro E, Nathanson KL, Neuhausen SL, Nevanlinna H, Yie JNY, Nielsen HR, Nielsen FC, Nikitina-Zake L, Odunsi K, Offit K, Olah E, Olbrecht S, Olopade OI, Olson SH, Olsson H, Osorio A, Papi L, Park SK, Parsons MT, Pathak H, Pedersen IS, Peixoto A, Pejovic T, Perez-Segura P, Permuth JB, Peshkin B, Peterlongo P, Piskorz A, Prokofyeva D, Radice P, Rantala J, Riggan MJ, Risch HA, Rodriguez-Antona C, Ross E, Rossing MA, Runnebaum I, Sandler DP, Santamariña M, Soucy P, Schmutzler RK, Setiawan VW, Shan K, Sieh W, Simard J, Singer CF, Sokolenko AP, Song H, Southey MC, Steed H, Stoppa-Lyonnet D, Sutphen R, Swerdlow AJ, Tan YY, Teixeira MR, Teo SH, Terry KL, Terry MB, Thomassen M, Thompson PJ, Thomsen LCV, Thull DL, Tischkowitz M, Titus L, Toland AE, Torres D, Trabert B, Travis R, Tung N, Tworoger SS, Valen E, van Altena AM, van der Hout AH, Van Nieuwenhuysen E, van Rensburg EJ, Vega A, Edwards DV, Vierkant RA, Wang F, Wappenschmidt B, Webb PM, Weinberg CR, Weitzel JN, Wentzensen N, White E, Whittemore AS, Winham SJ, Wolk A, Woo YL, Wu AH, Yan L, Yannoukakos D, Zavaglia KM, Zheng W, Ziogas A, Zorn KK, Kleibl Z, Easton D, Lawrenson K, DeFazio A, Sellers TA, Ramus SJ, Pearce CL, Monteiro AN, Cunningham J, Goode EL, Schildkraut JM, Berchuck A, Chenevix-Trench G, Gayther SA, Antoniou AC, Pharoah PDP.
PMID: 35027648
Eur J Hum Genet. 2022 Jan 14; doi: 10.1038/s41431-021-00987-7. Epub 2022 Jan 14.

Polygenic risk scores (PRS) for epithelial ovarian cancer (EOC) have the potential to improve risk stratification. Joint estimation of Single Nucleotide Polymorphism (SNP) effects in models could improve predictive performance over standard approaches of PRS construction. Here, we implemented...

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Dareng EO, Tyrer JP, Barnes DR, et al. Polygenic risk modeling for prediction of epithelial ovarian cancer risk. Eur J Hum Genet. 2022;doi: 10.1038/s41431-021-00987-7.
Dareng, E. O., Tyrer, J. P., Barnes, D. R., Jones, M. R., Yang, X., Aben, K. K. H., Adank, M. A., Agata, S., Andrulis, I. L., Anton-Culver, H., Antonenkova, N. N., Aravantinos, G., Arun, B. K., Augustinsson, A., Balmaña, J., Bandera, E. V., Barkardottir, R. B., Barrowdale, D., Beckmann, M. W., Beeghly-Fadiel, A., Benitez, J., Bermisheva, M., Bernardini, M. Q., Bjorge, L., Black, A., Bogdanova, N. V., Bonanni, B., Borg, A., Brenton, J. D., Budzilowska, A., Butzow, R., Buys, S. S., Cai, H., Caligo, M. A., Campbell, I., Cannioto, R., Cassingham, H., Chang-Claude, J., Chanock, S. J., Chen, K., Chiew, Y. E., Chung, W. K., Claes, K. B. M., Colonna, S., Cook, L. S., Couch, F. J., Daly, M. B., Dao, F., Davies, E., de la Hoya, M., de Putter, R., Dennis, J., DePersia, A., Devilee, P., Diez, O., Ding, Y. C., Doherty, J. A., Domchek, S. M., Dörk, T., du Bois, A., Dürst, M., Eccles, D. M., Eliassen, H. A., Engel, C., Evans, G. D., Fasching, P. A., Flanagan, J. M., Fortner, R. T., Machackova, E., Friedman, E., Ganz, P. A., Garber, J., Gensini, F., Giles, G. G., Glendon, G., Godwin, A. K., Goodman, M. T., Greene, M. H., Gronwald, J., Hahnen, E., Haiman, C. A., Håkansson, N., Hamann, U., Hansen, T. V. O., Harris, H. R., Hartman, M., Heitz, F., Hildebrandt, M. A. T., Høgdall, E., Høgdall, C. K., Hopper, J. L., Huang, R. Y., Huff, C., Hulick, P. J., Huntsman, D. G., Imyanitov, E. N., Isaacs, C., Jakubowska, A., James, P. A., Janavicius, R., Jensen, A., Johannsson, O. T., John, E. M., Jones, M. E., Kang, D., Karlan, B. Y., Karnezis, A., Kelemen, L. E., Khusnutdinova, E., Kiemeney, L. A., Kim, B. G., Kjaer, S. K., Komenaka, I., Kupryjanczyk, J., Kurian, A. W., Kwong, A., Lambrechts, D., Larson, M. C., Lazaro, C., Le, N. D., Leslie, G., Lester, J., Lesueur, F., Levine, D. A., Li, L., Li, J., Loud, J. T., Lu, K. H., Lubiński, J., Mai, P. L., Manoukian, S., Marks, J. R., Matsuno, R. K., Matsuo, K., May, T., McGuffog, L., McLaughlin, J. R., McNeish, I. A., Mebirouk, N., Menon, U., Miller, A., Milne, R. L., Minlikeeva, A., Modugno, F., Montagna, M., Moysich, K. B., Munro, E., Nathanson, K. L., Neuhausen, S. L., Nevanlinna, H., Yie, J. N. Y., Nielsen, H. R., Nielsen, F. C., Nikitina-Zake, L., Odunsi, K., Offit, K., Olah, E., Olbrecht, S., Olopade, O. I., Olson, S. H., Olsson, H., Osorio, A., Papi, L., Park, S. K., Parsons, M. T., Pathak, H., Pedersen, I. S., Peixoto, A., Pejovic, T., Perez-Segura, P., Permuth, J. B., Peshkin, B., Peterlongo, P., Piskorz, A., Prokofyeva, D., Radice, P., Rantala, J., Riggan, M. J., Risch, H. A., Rodriguez-Antona, C., Ross, E., Rossing, M. A., Runnebaum, I., Sandler, D. P., Santamariña, M., Soucy, P., Schmutzler, R. K., Setiawan, V. W., Shan, K., Sieh, W., Simard, J., Singer, C. F., Sokolenko, A. P., Song, H., Southey, M. C., Steed, H., Stoppa-Lyonnet, D., Sutphen, R., Swerdlow, A. J., Tan, Y. Y., Teixeira, M. R., Teo, S. H., Terry, K. L., Terry, M. B., Thomassen, M., Thompson, P. J., Thomsen, L. C. V., Thull, D. L., Tischkowitz, M., Titus, L., Toland, A. E., Torres, D., Trabert, B., Travis, R., Tung, N., Tworoger, S. S., Valen, E., van Altena, A. M., van der Hout, A. H., Van Nieuwenhuysen, E., van Rensburg, E. J., Vega, A., Edwards, D. V., Vierkant, R. A., Wang, F., Wappenschmidt, B., Webb, P. M., Weinberg, C. R., Weitzel, J. N., Wentzensen, N., White, E., Whittemore, A. S., Winham, S. J., Wolk, A., Woo, Y. L., Wu, A. H., Yan, L., Yannoukakos, D., Zavaglia, K. M., Zheng, W., Ziogas, A., Zorn, K. K., Kleibl, Z., Easton, D., Lawrenson, K., DeFazio, A., Sellers, T. A., Ramus, S. J., Pearce, C. L., Monteiro, A. N., Cunningham, J., Goode, E. L., Schildkraut, J. M., Berchuck, A., Chenevix-Trench, G., Gayther, S. A., Antoniou, A. C., & Pharoah, P. D. P. (2022). Polygenic risk modeling for prediction of epithelial ovarian cancer risk. European journal of human genetics : EJHG, . https://doi.org/10.1038/s41431-021-00987-7
Dareng, Eileen O, et al. "Polygenic risk modeling for prediction of epithelial ovarian cancer risk." European journal of human genetics : EJHG vol. (2022). doi: https://doi.org/10.1038/s41431-021-00987-7
Dareng EO, Tyrer JP, Barnes DR, Jones MR, Yang X, Aben KKH, Adank MA, Agata S, Andrulis IL, Anton-Culver H, Antonenkova NN, Aravantinos G, Arun BK, Augustinsson A, Balmaña J, Bandera EV, Barkardottir RB, Barrowdale D, Beckmann MW, Beeghly-Fadiel A, Benitez J, Bermisheva M, Bernardini MQ, Bjorge L, Black A, Bogdanova NV, Bonanni B, Borg A, Brenton JD, Budzilowska A, Butzow R, Buys SS, Cai H, Caligo MA, Campbell I, Cannioto R, Cassingham H, Chang-Claude J, Chanock SJ, Chen K, Chiew YE, Chung WK, Claes KBM, Colonna S, Cook LS, Couch FJ, Daly MB, Dao F, Davies E, de la Hoya M, de Putter R, Dennis J, DePersia A, Devilee P, Diez O, Ding YC, Doherty JA, Domchek SM, Dörk T, du Bois A, Dürst M, Eccles DM, Eliassen HA, Engel C, Evans GD, Fasching PA, Flanagan JM, Fortner RT, Machackova E, Friedman E, Ganz PA, Garber J, Gensini F, Giles GG, Glendon G, Godwin AK, Goodman MT, Greene MH, Gronwald J, Hahnen E, Haiman CA, Håkansson N, Hamann U, Hansen TVO, Harris HR, Hartman M, Heitz F, Hildebrandt MAT, Høgdall E, Høgdall CK, Hopper JL, Huang RY, Huff C, Hulick PJ, Huntsman DG, Imyanitov EN, Isaacs C, Jakubowska A, James PA, Janavicius R, Jensen A, Johannsson OT, John EM, Jones ME, Kang D, Karlan BY, Karnezis A, Kelemen LE, Khusnutdinova E, Kiemeney LA, Kim BG, Kjaer SK, Komenaka I, Kupryjanczyk J, Kurian AW, Kwong A, Lambrechts D, Larson MC, Lazaro C, Le ND, Leslie G, Lester J, Lesueur F, Levine DA, Li L, Li J, Loud JT, Lu KH, Lubiński J, Mai PL, Manoukian S, Marks JR, Matsuno RK, Matsuo K, May T, McGuffog L, McLaughlin JR, McNeish IA, Mebirouk N, Menon U, Miller A, Milne RL, Minlikeeva A, Modugno F, Montagna M, Moysich KB, Munro E, Nathanson KL, Neuhausen SL, Nevanlinna H, Yie JNY, Nielsen HR, Nielsen FC, Nikitina-Zake L, Odunsi K, Offit K, Olah E, Olbrecht S, Olopade OI, Olson SH, Olsson H, Osorio A, Papi L, Park SK, Parsons MT, Pathak H, Pedersen IS, Peixoto A, Pejovic T, Perez-Segura P, Permuth JB, Peshkin B, Peterlongo P, Piskorz A, Prokofyeva D, Radice P, Rantala J, Riggan MJ, Risch HA, Rodriguez-Antona C, Ross E, Rossing MA, Runnebaum I, Sandler DP, Santamariña M, Soucy P, Schmutzler RK, Setiawan VW, Shan K, Sieh W, Simard J, Singer CF, Sokolenko AP, Song H, Southey MC, Steed H, Stoppa-Lyonnet D, Sutphen R, Swerdlow AJ, Tan YY, Teixeira MR, Teo SH, Terry KL, Terry MB, Thomassen M, Thompson PJ, Thomsen LCV, Thull DL, Tischkowitz M, Titus L, Toland AE, Torres D, Trabert B, Travis R, Tung N, Tworoger SS, Valen E, van Altena AM, van der Hout AH, Van Nieuwenhuysen E, van Rensburg EJ, Vega A, Edwards DV, Vierkant RA, Wang F, Wappenschmidt B, Webb PM, Weinberg CR, Weitzel JN, Wentzensen N, White E, Whittemore AS, Winham SJ, Wolk A, Woo YL, Wu AH, Yan L, Yannoukakos D, Zavaglia KM, Zheng W, Ziogas A, Zorn KK, Kleibl Z, Easton D, Lawrenson K, DeFazio A, Sellers TA, Ramus SJ, Pearce CL, Monteiro AN, Cunningham J, Goode EL, Schildkraut JM, Berchuck A, Chenevix-Trench G, Gayther SA, Antoniou AC, Pharoah PDP. Polygenic risk modeling for prediction of epithelial ovarian cancer risk. Eur J Hum Genet. 2022 Jan 14; doi: 10.1038/s41431-021-00987-7. Epub 2022 Jan 14. PMID: 35027648.
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The ethics of preconception expanded carrier screening in patients seeking assisted reproduction.

Human reproduction open

de Wert G, van der Hout S, Goddijn M, Vassena R, Frith L, Vermeulen N, Eichenlaub-Ritter U.
PMID: 33604456
Hum Reprod Open. 2021 Feb 12;2021(1):hoaa063. doi: 10.1093/hropen/hoaa063. eCollection 2021.

Expanded carrier screening (ECS) entails a screening offer for carrier status for multiple recessive disorders simultaneously and allows testing of couples or individuals regardless of ancestry or geographic origin. Although universal ECS-referring to a screening offer for the general...

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de Wert G, van der Hout S, Goddijn M, et al. The ethics of preconception expanded carrier screening in patients seeking assisted reproduction. Hum Reprod Open. 2021;2021(1):hoaa063doi: 10.1093/hropen/hoaa063.
de Wert, G., van der Hout, S., Goddijn, M., Vassena, R., Frith, L., Vermeulen, N., Eichenlaub-Ritter, U. (2021). The ethics of preconception expanded carrier screening in patients seeking assisted reproduction. Human reproduction open, 2021(1), hoaa063. https://doi.org/10.1093/hropen/hoaa063
de Wert, Guido, et al. "The ethics of preconception expanded carrier screening in patients seeking assisted reproduction." Human reproduction open vol. 2021,1 (2021): hoaa063. doi: https://doi.org/10.1093/hropen/hoaa063
de Wert G, van der Hout S, Goddijn M, Vassena R, Frith L, Vermeulen N, Eichenlaub-Ritter U. The ethics of preconception expanded carrier screening in patients seeking assisted reproduction. Hum Reprod Open. 2021 Feb 12;2021(1):hoaa063. doi: 10.1093/hropen/hoaa063. eCollection 2021. PMID: 33604456; PMCID: PMC7880037.
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Author Correction: Tree mode of death and mortality risk factors across Amazon forests.

Nature communications

Esquivel-Muelbert A, Phillips OL, Brienen RJW, Fauset S, Sullivan MJP, Baker TR, Chao KJ, Feldpausch TR, Gloor E, Higuchi N, Houwing-Duistermaat J, Lloyd J, Liu H, Malhi Y, Marimon B, Marimon Junior BH, Monteagudo-Mendoza A, Poorter L, Silveira M, Torre EV, Dávila EA, Del Aguila Pasquel J, Almeida E, Loayza PA, Andrade A, Aragão LEOC, Araujo-Murakami A, Arets E, Arroyo L, Aymard C GA, Baisie M, Baraloto C, Camargo PB, Barroso J, Blanc L, Bonal D, Bongers F, Boot R, Brown F, Burban B, Camargo JL, Castro W, Moscoso VC, Chave J, Comiskey J, Valverde FC, da Costa AL, Cardozo ND, Di Fiore A, Dourdain A, Erwin T, Llampazo GF, Vieira ICG, Herrera R, Honorio Coronado E, Huamantupa-Chuquimaco I, Jimenez-Rojas E, Killeen T, Laurance S, Laurance W, Levesley A, Lewis SL, Ladvocat KLLM, Lopez-Gonzalez G, Lovejoy T, Meir P, Mendoza C, Morandi P, Neill D, Nogueira Lima AJ, Vargas PN, de Oliveira EA, Camacho NP, Pardo G, Peacock J, Peña-Claros M, Peñuela-Mora MC, Pickavance G, Pipoly J, Pitman N, Prieto A, Pugh TAM, Quesada C, Ramirez-Angulo H, de Almeida Reis SM, Rejou-Machain M, Correa ZR, Bayona LR, Rudas A, Salomão R, Serrano J, Espejo JS, Silva N, Singh J, Stahl C, Stropp J, Swamy V, Talbot J, Ter Steege H, Terborgh J, Thomas R, Toledo M, Torres-Lezama A, Gamarra LV, van der Heijden G, van der Meer P, van der Hout P, Martinez RV, Vieira SA, Cayo JV, Vos V, Zagt R, Zuidema P, Galbraith D.
PMID: 33397985
Nat Commun. 2021 Jan 04;12(1):209. doi: 10.1038/s41467-020-20537-x.

No abstract available.

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Esquivel-Muelbert A, Phillips OL, Brienen RJW, et al. Author Correction: Tree mode of death and mortality risk factors across Amazon forests. Nat Commun. 2021;12(1):209doi: 10.1038/s41467-020-20537-x.
Esquivel-Muelbert, A., Phillips, O. L., Brienen, R. J. W., Fauset, S., Sullivan, M. J. P., Baker, T. R., Chao, K. J., Feldpausch, T. R., Gloor, E., Higuchi, N., Houwing-Duistermaat, J., Lloyd, J., Liu, H., Malhi, Y., Marimon, B., Marimon Junior, B. H., Monteagudo-Mendoza, A., Poorter, L., Silveira, M., Torre, E. V., Dávila, E. A., Del Aguila Pasquel, J., Almeida, E., Loayza, P. A., Andrade, A., Aragão, L. E. O. C., Araujo-Murakami, A., Arets, E., Arroyo, L., Aymard C, G. A., Baisie, M., Baraloto, C., Camargo, P. B., Barroso, J., Blanc, L., Bonal, D., Bongers, F., Boot, R., Brown, F., Burban, B., Camargo, J. L., Castro, W., Moscoso, V. C., Chave, J., Comiskey, J., Valverde, F. C., da Costa, A. L., Cardozo, N. D., Di Fiore, A., Dourdain, A., Erwin, T., Llampazo, G. F., Vieira, I. C. G., Herrera, R., Honorio Coronado, E., Huamantupa-Chuquimaco, I., Jimenez-Rojas, E., Killeen, T., Laurance, S., Laurance, W., Levesley, A., Lewis, S. L., Ladvocat, K. L. L. M., Lopez-Gonzalez, G., Lovejoy, T., Meir, P., Mendoza, C., Morandi, P., Neill, D., Nogueira Lima, A. J., Vargas, P. N., de Oliveira, E. A., Camacho, N. P., Pardo, G., Peacock, J., Peña-Claros, M., Peñuela-Mora, M. C., Pickavance, G., Pipoly, J., Pitman, N., Prieto, A., Pugh, T. A. M., Quesada, C., Ramirez-Angulo, H., de Almeida Reis, S. M., Rejou-Machain, M., Correa, Z. R., Bayona, L. R., Rudas, A., Salomão, R., Serrano, J., Espejo, J. S., Silva, N., Singh, J., Stahl, C., Stropp, J., Swamy, V., Talbot, J., Ter Steege, H., Terborgh, J., Thomas, R., Toledo, M., Torres-Lezama, A., Gamarra, L. V., van der Heijden, G., van der Meer, P., van der Hout, P., Martinez, R. V., Vieira, S. A., Cayo, J. V., Vos, V., Zagt, R., Zuidema, P., & Galbraith, D. (2021). Author Correction: Tree mode of death and mortality risk factors across Amazon forests. Nature communications, 12(1), 209. https://doi.org/10.1038/s41467-020-20537-x
Esquivel-Muelbert, Adriane, et al. "Author Correction: Tree mode of death and mortality risk factors across Amazon forests." Nature communications vol. 12,1 (2021): 209. doi: https://doi.org/10.1038/s41467-020-20537-x
Esquivel-Muelbert A, Phillips OL, Brienen RJW, Fauset S, Sullivan MJP, Baker TR, Chao KJ, Feldpausch TR, Gloor E, Higuchi N, Houwing-Duistermaat J, Lloyd J, Liu H, Malhi Y, Marimon B, Marimon Junior BH, Monteagudo-Mendoza A, Poorter L, Silveira M, Torre EV, Dávila EA, Del Aguila Pasquel J, Almeida E, Loayza PA, Andrade A, Aragão LEOC, Araujo-Murakami A, Arets E, Arroyo L, Aymard C GA, Baisie M, Baraloto C, Camargo PB, Barroso J, Blanc L, Bonal D, Bongers F, Boot R, Brown F, Burban B, Camargo JL, Castro W, Moscoso VC, Chave J, Comiskey J, Valverde FC, da Costa AL, Cardozo ND, Di Fiore A, Dourdain A, Erwin T, Llampazo GF, Vieira ICG, Herrera R, Honorio Coronado E, Huamantupa-Chuquimaco I, Jimenez-Rojas E, Killeen T, Laurance S, Laurance W, Levesley A, Lewis SL, Ladvocat KLLM, Lopez-Gonzalez G, Lovejoy T, Meir P, Mendoza C, Morandi P, Neill D, Nogueira Lima AJ, Vargas PN, de Oliveira EA, Camacho NP, Pardo G, Peacock J, Peña-Claros M, Peñuela-Mora MC, Pickavance G, Pipoly J, Pitman N, Prieto A, Pugh TAM, Quesada C, Ramirez-Angulo H, de Almeida Reis SM, Rejou-Machain M, Correa ZR, Bayona LR, Rudas A, Salomão R, Serrano J, Espejo JS, Silva N, Singh J, Stahl C, Stropp J, Swamy V, Talbot J, Ter Steege H, Terborgh J, Thomas R, Toledo M, Torres-Lezama A, Gamarra LV, van der Heijden G, van der Meer P, van der Hout P, Martinez RV, Vieira SA, Cayo JV, Vos V, Zagt R, Zuidema P, Galbraith D. Author Correction: Tree mode of death and mortality risk factors across Amazon forests. Nat Commun. 2021 Jan 04;12(1):209. doi: 10.1038/s41467-020-20537-x. PMID: 33397985; PMCID: PMC7782710.
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Estimating stroke-free and total life expectancy in the presence of non-ignorable missing values.

Journal of the Royal Statistical Society. Series A, (Statistics in Society)

van den Hout A, Matthews FE.
PMID: 20454440
J R Stat Soc Ser A Stat Soc. 2010 Apr;173(2):331-349. doi: 10.1111/j.1467-985X.2009.00610.x.

A continuous time three-state model with time-dependent transition intensities is formulated to describe transitions between healthy and unhealthy states before death. By using time continuously, known death times can be taken into account. To deal with possible non-ignorable missing...

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van den Hout A, Matthews FE. Estimating stroke-free and total life expectancy in the presence of non-ignorable missing values. J R Stat Soc Ser A Stat Soc. 2010;173(2):331-349doi: 10.1111/j.1467-985X.2009.00610.x.
van den Hout, A., & Matthews, F. E. (2010). Estimating stroke-free and total life expectancy in the presence of non-ignorable missing values. Journal of the Royal Statistical Society. Series A, (Statistics in Society), 173(2), 331-349. https://doi.org/10.1111/j.1467-985X.2009.00610.x
van den Hout, Ardo, and Matthews, Fiona E. "Estimating stroke-free and total life expectancy in the presence of non-ignorable missing values." Journal of the Royal Statistical Society. Series A, (Statistics in Society) vol. 173,2 (2010): 331-349. doi: https://doi.org/10.1111/j.1467-985X.2009.00610.x
van den Hout A, Matthews FE. Estimating stroke-free and total life expectancy in the presence of non-ignorable missing values. J R Stat Soc Ser A Stat Soc. 2010 Apr;173(2):331-349. doi: 10.1111/j.1467-985X.2009.00610.x. PMID: 20454440; PMCID: PMC2859253.
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Nature is (a) mine: conceptions of nature in the Dutch ecogenomics community.

Life sciences, society and policy

Van der Hout S.
PMID: 26085446
Life Sci Soc Policy. 2014 Dec;10:10. doi: 10.1186/s40504-014-0010-y. Epub 2014 May 17.

Every field of science, but especially biology, contains particular conceptions of nature. These conceptions are not merely epistemological or ontological, but also have normative dimensions; they provide an ethos, a framework for moral orientation. These normative dimensions, whilst often...

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Van der Hout S. Nature is (a) mine: conceptions of nature in the Dutch ecogenomics community. Life Sci Soc Policy. 2014;10:10doi: 10.1186/s40504-014-0010-y.
Van der Hout, S. (2014). Nature is (a) mine: conceptions of nature in the Dutch ecogenomics community. Life sciences, society and policy, 1010. https://doi.org/10.1186/s40504-014-0010-y
Van der Hout, Sanne. "Nature is (a) mine: conceptions of nature in the Dutch ecogenomics community." Life sciences, society and policy vol. 10 (2014): 10. doi: https://doi.org/10.1186/s40504-014-0010-y
Van der Hout S. Nature is (a) mine: conceptions of nature in the Dutch ecogenomics community. Life Sci Soc Policy. 2014 Dec;10:10. doi: 10.1186/s40504-014-0010-y. Epub 2014 May 17. PMID: 26085446; PMCID: PMC4648842.
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Estimating the prevalence of sensitive behaviour and cheating with a dual design for direct questioning and randomized response.

Journal of the Royal Statistical Society. Series C, Applied statistics

van den Hout A, Böckenholt U, van der Heijden PG.
PMID: 21461334
J R Stat Soc Ser C Appl Stat. 2010 Aug;59(4):723-736. doi: 10.1111/j.1467-9876.2010.00720.x.

Randomized response is a misclassification design to estimate the prevalence of sensitive behaviour. Respondents who do not follow the instructions of the design are considered to be cheating. A mixture model is proposed to estimate the prevalence of sensitive...

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van den Hout A, Böckenholt U, van der Heijden PG. Estimating the prevalence of sensitive behaviour and cheating with a dual design for direct questioning and randomized response. J R Stat Soc Ser C Appl Stat. 2010;59(4):723-736doi: 10.1111/j.1467-9876.2010.00720.x.
van den Hout, A., Böckenholt, U., & van der Heijden, P. G. (2010). Estimating the prevalence of sensitive behaviour and cheating with a dual design for direct questioning and randomized response. Journal of the Royal Statistical Society. Series C, Applied statistics, 59(4), 723-736. https://doi.org/10.1111/j.1467-9876.2010.00720.x
van den Hout, Ardo, et al. "Estimating the prevalence of sensitive behaviour and cheating with a dual design for direct questioning and randomized response." Journal of the Royal Statistical Society. Series C, Applied statistics vol. 59,4 (2010): 723-736. doi: https://doi.org/10.1111/j.1467-9876.2010.00720.x
van den Hout A, Böckenholt U, van der Heijden PG. Estimating the prevalence of sensitive behaviour and cheating with a dual design for direct questioning and randomized response. J R Stat Soc Ser C Appl Stat. 2010 Aug;59(4):723-736. doi: 10.1111/j.1467-9876.2010.00720.x. PMID: 21461334; PMCID: PMC3065643.
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