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Data Management Tools to Measure the Impact of Core Facilities

EPSCoR Research Infrastructure Improvement Program AND Program Evaluation

[No authors listed]
GSID: mEsV5Lypo18J
DB Smith, TL Yarnell, BJ Jibben, LE Liou… - Journal of …, 2021 - ncbi.nlm.nih.gov

Abstract The Biomolecular Research Center at Boise State University is a research core facility that supports the study of biomolecules with an emphasis on protein structure and function, molecular interactions, and imaging. The mission of the core is to...

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Smith, D. B., Yarnell, T. L., Jibben, B. J., Liou, L. E., Hovde, C. J., & Oxford, J. T. (2021). Data Management Tools to Measure the Impact of Core Facilities. Journal of Biomolecular Techniques: JBT, 32(2), 63.
Smith, Diane B., et al. "Data Management Tools to Measure the Impact of Core Facilities." Journal of Biomolecular Techniques: JBT 32.2 (2021): 63.
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Engineered cell-cell communication via DNA messaging.

Journal of biological engineering

Ortiz ME, Endy D.
PMID: 22958599
J Biol Eng. 2012 Sep 07;6(1):16. doi: 10.1186/1754-1611-6-16.

BACKGROUND: Evolution has selected for organisms that benefit from genetically encoded cell-cell communication. Engineers have begun to repurpose elements of natural communication systems to realize programmed pattern formation and coordinate other population-level behaviors. However, existing engineered systems rely on...

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Ortiz ME, Endy D. Engineered cell-cell communication via DNA messaging. J Biol Eng. 2012;6(1):16doi: 10.1186/1754-1611-6-16.
Ortiz, M. E., & Endy, D. (2012). Engineered cell-cell communication via DNA messaging. Journal of biological engineering, 6(1), 16. https://doi.org/10.1186/1754-1611-6-16
Ortiz, Monica E, and Endy, Drew. "Engineered cell-cell communication via DNA messaging." Journal of biological engineering vol. 6,1 (2012): 16. doi: https://doi.org/10.1186/1754-1611-6-16
Ortiz ME, Endy D. Engineered cell-cell communication via DNA messaging. J Biol Eng. 2012 Sep 07;6(1):16. doi: 10.1186/1754-1611-6-16. PMID: 22958599; PMCID: PMC3509006.
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Enhancement of ion intensity in time-of-flight secondary-ionization mass spectrometry.

Journal of the American Society for Mass Spectrometry

Nicola AJ, Muddiman DC, Hercules DM.
PMID: 24203401
J Am Soc Mass Spectrom. 1996 May;7(5):467-72. doi: 10.1016/1044-0305(96)00006-2.

Enhancement of ion intensity in static secondary-ionization mass spectrometry (SIMS) has been achieved by using a matrix-assisted sample preparation technique. Previous investigations of polymers and biomolecules by SIMS indicated that secondary-ion (SI) yield is dependent on substrate coverage. Recently...

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Nicola AJ, Muddiman DC, Hercules DM. Enhancement of ion intensity in time-of-flight secondary-ionization mass spectrometry. J Am Soc Mass Spectrom. 1996;7(5):467-72doi: 10.1016/1044-0305(96)00006-2.
Nicola, A. J., Muddiman, D. C., & Hercules, D. M. (1996). Enhancement of ion intensity in time-of-flight secondary-ionization mass spectrometry. Journal of the American Society for Mass Spectrometry, 7(5), 467-72. https://doi.org/10.1016/1044-0305(96)00006-2
Nicola, A J, et al. "Enhancement of ion intensity in time-of-flight secondary-ionization mass spectrometry." Journal of the American Society for Mass Spectrometry vol. 7,5 (1996): 467-72. doi: https://doi.org/10.1016/1044-0305(96)00006-2
Nicola AJ, Muddiman DC, Hercules DM. Enhancement of ion intensity in time-of-flight secondary-ionization mass spectrometry. J Am Soc Mass Spectrom. 1996 May;7(5):467-72. doi: 10.1016/1044-0305(96)00006-2. PMID: 24203401.
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Chitin from the Extract of Cuttlebone Induces Acute Inflammation and Enhances MMP1 Expression.

Biomolecules & therapeutics

Lee KM, Shim H, Lee GS, Park IH, Lee OS, Lim SC, Kang TJ.
PMID: 24265872
Biomol Ther (Seoul). 2013 May 30;21(3):246-50. doi: 10.4062/biomolther.2013.036.

We previously reported that the extract from cuttlebone (CB) has wound healing effect in burned lesion of rat. In present study, the main component of CB extract was analyzed and its wound healing activity was evaluated by using in...

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Lee KM, Shim H, Lee GS, et al. Chitin from the Extract of Cuttlebone Induces Acute Inflammation and Enhances MMP1 Expression. Biomol Ther (Seoul). 2013;21(3):246-50doi: 10.4062/biomolther.2013.036.
Lee, K. M., Shim, H., Lee, G. S., Park, I. H., Lee, O. S., Lim, S. C., & Kang, T. J. (2013). Chitin from the Extract of Cuttlebone Induces Acute Inflammation and Enhances MMP1 Expression. Biomolecules & therapeutics, 21(3), 246-50. https://doi.org/10.4062/biomolther.2013.036
Lee, Ki Man, et al. "Chitin from the Extract of Cuttlebone Induces Acute Inflammation and Enhances MMP1 Expression." Biomolecules & therapeutics vol. 21,3 (2013): 246-50. doi: https://doi.org/10.4062/biomolther.2013.036
Lee KM, Shim H, Lee GS, Park IH, Lee OS, Lim SC, Kang TJ. Chitin from the Extract of Cuttlebone Induces Acute Inflammation and Enhances MMP1 Expression. Biomol Ther (Seoul). 2013 May 30;21(3):246-50. doi: 10.4062/biomolther.2013.036. PMID: 24265872; PMCID: PMC3830125.
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Hesperidin Suppresses Melanosome Transport by Blocking the Interaction of Rab27A-Melanophilin.

Biomolecules & therapeutics

Kim B, Lee JY, Lee HY, Nam KY, Park J, Lee SM, Kim JE, Lee JD, Hwang JS.
PMID: 24244821
Biomol Ther (Seoul). 2013 Sep 30;21(5):343-8. doi: 10.4062/biomolther.2013.032.

We investigated the inhibitory effects of hesperidin on melanogenesis. To find melanosome transport inhibitor from natural products, we collected the structural information of natural products from Korea Food and Drug Administration (KFDA) and performed pharmacophore-based in silico screening for...

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Kim B, Lee JY, Lee HY, et al. Hesperidin Suppresses Melanosome Transport by Blocking the Interaction of Rab27A-Melanophilin. Biomol Ther (Seoul). 2013;21(5):343-8doi: 10.4062/biomolther.2013.032.
Kim, B., Lee, J. Y., Lee, H. Y., Nam, K. Y., Park, J., Lee, S. M., Kim, J. E., Lee, J. D., & Hwang, J. S. (2013). Hesperidin Suppresses Melanosome Transport by Blocking the Interaction of Rab27A-Melanophilin. Biomolecules & therapeutics, 21(5), 343-8. https://doi.org/10.4062/biomolther.2013.032
Kim, Bora, et al. "Hesperidin Suppresses Melanosome Transport by Blocking the Interaction of Rab27A-Melanophilin." Biomolecules & therapeutics vol. 21,5 (2013): 343-8. doi: https://doi.org/10.4062/biomolther.2013.032
Kim B, Lee JY, Lee HY, Nam KY, Park J, Lee SM, Kim JE, Lee JD, Hwang JS. Hesperidin Suppresses Melanosome Transport by Blocking the Interaction of Rab27A-Melanophilin. Biomol Ther (Seoul). 2013 Sep 30;21(5):343-8. doi: 10.4062/biomolther.2013.032. PMID: 24244821; PMCID: PMC3825197.
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The Interactions between ZnO Nanoparticles (NPs) and α-Linolenic Acid (LNA) Complexed to BSA Did Not Influence the Toxicity of ZnO NPs on HepG2 Cells.

Nanomaterials (Basel, Switzerland)

Zhou Y, Fang X, Gong Y, Xiao A, Xie Y, Liu L, Cao Y.
PMID: 28441756
Nanomaterials (Basel). 2017 Apr 24;7(4). doi: 10.3390/nano7040091.

BACKGROUND: Nanoparticles (NPs) entering the biological environment could interact with biomolecules, but little is known about the interaction between unsaturated fatty acids (UFA) and NPs.METHODS: This study used α-linolenic acid (LNA) complexed to bovine serum albumin (BSA) for UFA...

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Zhou Y, Fang X, Gong Y, et al. The Interactions between ZnO Nanoparticles (NPs) and α-Linolenic Acid (LNA) Complexed to BSA Did Not Influence the Toxicity of ZnO NPs on HepG2 Cells. Nanomaterials (Basel). 2017;7(4)doi: 10.3390/nano7040091.
Zhou, Y., Fang, X., Gong, Y., Xiao, A., Xie, Y., Liu, L., & Cao, Y. (2017). The Interactions between ZnO Nanoparticles (NPs) and α-Linolenic Acid (LNA) Complexed to BSA Did Not Influence the Toxicity of ZnO NPs on HepG2 Cells. Nanomaterials (Basel, Switzerland), 7(4), . https://doi.org/10.3390/nano7040091
Zhou, Yiwei, et al. "The Interactions between ZnO Nanoparticles (NPs) and α-Linolenic Acid (LNA) Complexed to BSA Did Not Influence the Toxicity of ZnO NPs on HepG2 Cells." Nanomaterials (Basel, Switzerland) vol. 7,4 (2017). doi: https://doi.org/10.3390/nano7040091
Zhou Y, Fang X, Gong Y, Xiao A, Xie Y, Liu L, Cao Y. The Interactions between ZnO Nanoparticles (NPs) and α-Linolenic Acid (LNA) Complexed to BSA Did Not Influence the Toxicity of ZnO NPs on HepG2 Cells. Nanomaterials (Basel). 2017 Apr 24;7(4). doi: 10.3390/nano7040091. PMID: 28441756; PMCID: PMC5408183.
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An Audio Jack-Based Electrochemical Impedance Spectroscopy Sensor for Point-of-Care Diagnostics.

IEEE sensors journal

Jiang H, Sun A, Venkatesh AG, Hall DA.
PMID: 28943809
IEEE Sens J. 2017 Feb 01;17(3):589-597. doi: 10.1109/JSEN.2016.2634530. Epub 2016 Dec 01.

Portable and easy-to-use point-of-care (POC) diagnostic devices hold high promise for dramatically improving public health and wellness. In this paper, we present a mobile health (mHealth) immunoassay platform based on audio jack embedded devices, such as smartphones and laptops,...

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Jiang H, Sun A, Venkatesh AG, et al. An Audio Jack-Based Electrochemical Impedance Spectroscopy Sensor for Point-of-Care Diagnostics. IEEE Sens J. 2016;17(3):589-597doi: 10.1109/JSEN.2016.2634530.
Jiang, H., Sun, A., Venkatesh, A. G., & Hall, D. A. (2017). An Audio Jack-Based Electrochemical Impedance Spectroscopy Sensor for Point-of-Care Diagnostics. IEEE sensors journal, 17(3), 589-597. https://doi.org/10.1109/JSEN.2016.2634530
Jiang, Haowei, et al. "An Audio Jack-Based Electrochemical Impedance Spectroscopy Sensor for Point-of-Care Diagnostics." IEEE sensors journal vol. 17,3 (2017): 589-597. doi: https://doi.org/10.1109/JSEN.2016.2634530
Jiang H, Sun A, Venkatesh AG, Hall DA. An Audio Jack-Based Electrochemical Impedance Spectroscopy Sensor for Point-of-Care Diagnostics. IEEE Sens J. 2017 Feb 01;17(3):589-597. doi: 10.1109/JSEN.2016.2634530. Epub 2016 Dec 01. PMID: 28943809; PMCID: PMC5603240.
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Microbial Diversity in Extreme Marine Habitats and Their Biomolecules.

Microorganisms

Poli A, Finore I, Romano I, Gioiello A, Lama L, Nicolaus B.
PMID: 28509857
Microorganisms. 2017 May 16;5(2). doi: 10.3390/microorganisms5020025.

Extreme marine environments have been the subject of many studies and scientific publications. For many years, these environmental niches, which are characterized by high or low temperatures, high-pressure, low pH, high salt concentrations and also two or more extreme...

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Poli A, Finore I, Romano I, et al. Microbial Diversity in Extreme Marine Habitats and Their Biomolecules. Microorganisms. 2017;5(2)doi: 10.3390/microorganisms5020025.
Poli, A., Finore, I., Romano, I., Gioiello, A., Lama, L., & Nicolaus, B. (2017). Microbial Diversity in Extreme Marine Habitats and Their Biomolecules. Microorganisms, 5(2), . https://doi.org/10.3390/microorganisms5020025
Poli, Annarita, et al. "Microbial Diversity in Extreme Marine Habitats and Their Biomolecules." Microorganisms vol. 5,2 (2017). doi: https://doi.org/10.3390/microorganisms5020025
Poli A, Finore I, Romano I, Gioiello A, Lama L, Nicolaus B. Microbial Diversity in Extreme Marine Habitats and Their Biomolecules. Microorganisms. 2017 May 16;5(2). doi: 10.3390/microorganisms5020025. PMID: 28509857; PMCID: PMC5488096.
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Enhanced Resolution of DNA Separation Using Agarose Gel Electrophoresis Doped with Graphene Oxide.

Nanoscale research letters

Li J, Yang Y, Mao Z, Huang W, Qiu T, Wu Q.
PMID: 27637896
Nanoscale Res Lett. 2016 Dec;11(1):404. doi: 10.1186/s11671-016-1609-0. Epub 2016 Sep 15.

In this work, a novel agarose gel electrophoresis strategy has been developed for separation of DNA fragments by doping graphene oxide (GO) into agarose gel. The results show that the addition of GO into agarose gel significantly improved the...

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Li J, Yang Y, Mao Z, et al. Enhanced Resolution of DNA Separation Using Agarose Gel Electrophoresis Doped with Graphene Oxide. Nanoscale Res Lett. 2016;11(1):404doi: 10.1186/s11671-016-1609-0.
Li, J., Yang, Y., Mao, Z., Huang, W., Qiu, T., & Wu, Q. (2016). Enhanced Resolution of DNA Separation Using Agarose Gel Electrophoresis Doped with Graphene Oxide. Nanoscale research letters, 11(1), 404. https://doi.org/10.1186/s11671-016-1609-0
Li, Jialiang, et al. "Enhanced Resolution of DNA Separation Using Agarose Gel Electrophoresis Doped with Graphene Oxide." Nanoscale research letters vol. 11,1 (2016): 404. doi: https://doi.org/10.1186/s11671-016-1609-0
Li J, Yang Y, Mao Z, Huang W, Qiu T, Wu Q. Enhanced Resolution of DNA Separation Using Agarose Gel Electrophoresis Doped with Graphene Oxide. Nanoscale Res Lett. 2016 Dec;11(1):404. doi: 10.1186/s11671-016-1609-0. Epub 2016 Sep 15. PMID: 27637896; PMCID: PMC5025413.
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Imaging mass spectrometry: principle and application.

Biophysical reviews

Murayama C, Kimura Y, Setou M.
PMID: 28509996
Biophys Rev. 2009 Sep;1(3):131. doi: 10.1007/s12551-009-0015-6. Epub 2009 Sep 09.

Imaging mass spectrometry (IMS) is two-dimensional mass spectrometry to visualize the spatial distribution of biomolecules, which does not need either separation or purification of target molecules, and enables us to monitor not only the identification of unknown molecules but...

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Murayama C, Kimura Y, Setou M. Imaging mass spectrometry: principle and application. Biophys Rev. 2009;1(3):131doi: 10.1007/s12551-009-0015-6.
Murayama, C., Kimura, Y., & Setou, M. (2009). Imaging mass spectrometry: principle and application. Biophysical reviews, 1(3), 131. https://doi.org/10.1007/s12551-009-0015-6
Murayama, Chihiro, et al. "Imaging mass spectrometry: principle and application." Biophysical reviews vol. 1,3 (2009): 131. doi: https://doi.org/10.1007/s12551-009-0015-6
Murayama C, Kimura Y, Setou M. Imaging mass spectrometry: principle and application. Biophys Rev. 2009 Sep;1(3):131. doi: 10.1007/s12551-009-0015-6. Epub 2009 Sep 09. PMID: 28509996; PMCID: PMC5425681.
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Novel paradigm for immunotherapy of breast cancer by engaging prophylactic immunity against hepatitis B.

Clinical and translational medicine

Malecki M, Sabo C, Foorohar A, Tombokan X.
PMID: 27539579
Clin Transl Med. 2016 Dec;5(1):32. doi: 10.1186/s40169-016-0111-8. Epub 2016 Aug 18.

BACKGROUND: Immunotherapy of patients suffering from the human epidermal growth factor receptor 2 overexpressing (HER-2(+)) breast cancers with the anti-HER-2 antibodies results in increase of the patients' overall survival. However, no prophylactic vaccine is available against HER-2(+) breast cancers....

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Malecki M, Sabo C, Foorohar A, et al. Novel paradigm for immunotherapy of breast cancer by engaging prophylactic immunity against hepatitis B. Clin Transl Med. 2016;5(1):32doi: 10.1186/s40169-016-0111-8.
Malecki, M., Sabo, C., Foorohar, A., & Tombokan, X. (2016). Novel paradigm for immunotherapy of breast cancer by engaging prophylactic immunity against hepatitis B. Clinical and translational medicine, 5(1), 32. https://doi.org/10.1186/s40169-016-0111-8
Malecki, Marek, et al. "Novel paradigm for immunotherapy of breast cancer by engaging prophylactic immunity against hepatitis B." Clinical and translational medicine vol. 5,1 (2016): 32. doi: https://doi.org/10.1186/s40169-016-0111-8
Malecki M, Sabo C, Foorohar A, Tombokan X. Novel paradigm for immunotherapy of breast cancer by engaging prophylactic immunity against hepatitis B. Clin Transl Med. 2016 Dec;5(1):32. doi: 10.1186/s40169-016-0111-8. Epub 2016 Aug 18. PMID: 27539579; PMCID: PMC4990520.
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Gelation characteristics, physico-mechanical properties and degradation kinetics of micellar hydrogels.

European polymer journal

Moeinzadeh S, Jabbari E.
PMID: 26688592
Eur Polym J. 2015 Nov 01;72:566-576. doi: 10.1016/j.eurpolymj.2015.04.028. Epub 2015 Apr 25.

Due to their high water content and diffusivity of nutrients and biomolecules, hydrogels are very attractive as a matrix for growth factor immobilization and

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Moeinzadeh S, Jabbari E. Gelation characteristics, physico-mechanical properties and degradation kinetics of micellar hydrogels. Eur Polym J. 2015;72:566-576doi: 10.1016/j.eurpolymj.2015.04.028.
Moeinzadeh, S., & Jabbari, E. (2015). Gelation characteristics, physico-mechanical properties and degradation kinetics of micellar hydrogels. European polymer journal, 72566-576. https://doi.org/10.1016/j.eurpolymj.2015.04.028
Moeinzadeh, Seyedsina, and Jabbari, Esmaiel. "Gelation characteristics, physico-mechanical properties and degradation kinetics of micellar hydrogels." European polymer journal vol. 72 (2015): 566-576. doi: https://doi.org/10.1016/j.eurpolymj.2015.04.028
Moeinzadeh S, Jabbari E. Gelation characteristics, physico-mechanical properties and degradation kinetics of micellar hydrogels. Eur Polym J. 2015 Nov 01;72:566-576. doi: 10.1016/j.eurpolymj.2015.04.028. Epub 2015 Apr 25. PMID: 26688592; PMCID: PMC4680999.
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Showing 1 to 12 of 8292 entries