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Whole-genome duplication and the functional diversification of teleost fish hemoglobins

STEM and diversification

Butts GT, Nery MF, Opazo JC, Storz JF.
GSID: K6FuXjIyHA8J
JC Opazo, GT Butts, MF Nery, JF Storz… - … biology and evolution, 2013 - academic.oup.com

… , a third genome duplication occurred in the stem lineage of teleost fishes. This teleost-… the physiological, morphological, and behavioral diversification of this highly speciose group. The …

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Opazo, J. C., Butts, G. T., Nery, M. F., Storz, J. F., & Hoffmann, F. G. (2013). Whole-genome duplication and the functional diversification of teleost fish hemoglobins. Molecular biology and evolution, 30(1), 140-153.
Opazo, Juan C., et al. "Whole-genome duplication and the functional diversification of teleost fish hemoglobins." Molecular biology and evolution 30.1 (2013): 140-153.
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Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules.

F1000Research

Boron I, Bustamante JP, Davidge KS, Singh S, Bowman LA, Tinajero-Trejo M, Carballal S, Radi R, Poole RK, Dikshit K, Estrin DA, Marti MA, Boechi L.
PMID: 26478812
F1000Res. 2015 Jan 23;4:22. doi: 10.12688/f1000research.5921.1. eCollection 2015.

Mycobacterium tuberculosis, the causative agent of human tuberculosis, has two proteins belonging to the truncated hemoglobin (trHb) family. Mt-trHbN presents well-defined internal hydrophobic tunnels that allow O 2 and (•)NO to migrate easily from the solvent to the active...

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Boron I, Bustamante JP, Davidge KS, et al. Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules. F1000Res. 2015;4:22doi: 10.12688/f1000research.5921.1.
Boron, I., Bustamante, J. P., Davidge, K. S., Singh, S., Bowman, L. A., Tinajero-Trejo, M., Carballal, S., Radi, R., Poole, R. K., Dikshit, K., Estrin, D. A., Marti, M. A., & Boechi, L. (2015). Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules. F1000Research, 422. https://doi.org/10.12688/f1000research.5921.1
Boron, Ignacio, et al. "Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules." F1000Research vol. 4 (2015): 22. doi: https://doi.org/10.12688/f1000research.5921.1
Boron I, Bustamante JP, Davidge KS, Singh S, Bowman LA, Tinajero-Trejo M, Carballal S, Radi R, Poole RK, Dikshit K, Estrin DA, Marti MA, Boechi L. Ligand uptake in Mycobacterium tuberculosis truncated hemoglobins is controlled by both internal tunnels and active site water molecules. F1000Res. 2015 Jan 23;4:22. doi: 10.12688/f1000research.5921.1. eCollection 2015. PMID: 26478812; PMCID: PMC4591903.
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Reactive Nitrogen Species in Mitochondria and Their Implications in Plant Energy Status and Hypoxic Stress Tolerance.

Frontiers in plant science

Gupta KJ, Igamberdiev AU.
PMID: 27047533
Front Plant Sci. 2016 Mar 24;7:369. doi: 10.3389/fpls.2016.00369. eCollection 2016.

Hypoxic and anoxic conditions result in the energy crisis that leads to cell damage. Since mitochondria are the primary organelles for energy production, the support of these organelles in a functional state is an important task during oxygen deprivation....

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Gupta KJ, Igamberdiev AU. Reactive Nitrogen Species in Mitochondria and Their Implications in Plant Energy Status and Hypoxic Stress Tolerance. Front Plant Sci. 2016;7:369doi: 10.3389/fpls.2016.00369.
Gupta, K. J., & Igamberdiev, A. U. (2016). Reactive Nitrogen Species in Mitochondria and Their Implications in Plant Energy Status and Hypoxic Stress Tolerance. Frontiers in plant science, 7369. https://doi.org/10.3389/fpls.2016.00369
Gupta, Kapuganti Jagadis, and Igamberdiev, Abir U. "Reactive Nitrogen Species in Mitochondria and Their Implications in Plant Energy Status and Hypoxic Stress Tolerance." Frontiers in plant science vol. 7 (2016): 369. doi: https://doi.org/10.3389/fpls.2016.00369
Gupta KJ, Igamberdiev AU. Reactive Nitrogen Species in Mitochondria and Their Implications in Plant Energy Status and Hypoxic Stress Tolerance. Front Plant Sci. 2016 Mar 24;7:369. doi: 10.3389/fpls.2016.00369. eCollection 2016. PMID: 27047533; PMCID: PMC4806263.
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Hemoglobin transition in relation to metamorphosis in normal and isogenicXenopus.

Wilhelm Roux's archives of developmental biology

Just JJ, Schwager J, Weber R.
PMID: 28304866
Wilehm Roux Arch Dev Biol. 1977 Dec;183(4):307-323. doi: 10.1007/BF00848460.

Electrophoretic separation of hemoglobins of normalXenopus laevis and of isogenic animals derived from female hybrids ofXenopus laevis×Xenopus gilli revealed 5-9 components in premetamorphic larvae, and 3-4 components in adult toads. InXenopus laevis the number of larval hemoglobin components showed...

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Just JJ, Schwager J, Weber R. Hemoglobin transition in relation to metamorphosis in normal and isogenicXenopus. Wilehm Roux Arch Dev Biol. 1977;183(4):307-323doi: 10.1007/BF00848460.
Just, J. J., Schwager, J., & Weber, R. (1977). Hemoglobin transition in relation to metamorphosis in normal and isogenicXenopus. Wilhelm Roux's archives of developmental biology, 183(4), 307-323. https://doi.org/10.1007/BF00848460
Just, John J, et al. "Hemoglobin transition in relation to metamorphosis in normal and isogenicXenopus." Wilhelm Roux's archives of developmental biology vol. 183,4 (1977): 307-323. doi: https://doi.org/10.1007/BF00848460
Just JJ, Schwager J, Weber R. Hemoglobin transition in relation to metamorphosis in normal and isogenicXenopus. Wilehm Roux Arch Dev Biol. 1977 Dec;183(4):307-323. doi: 10.1007/BF00848460. PMID: 28304866.
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Hemoglobin switching in the salamanderPleurodeles waltlii : Immunofluorescence detection of larval and adult hemoglobins in single erythrocytes.

Wilhelm Roux's archives of developmental biology

Flavin M, Ton That H, Deparis P, Duprat AM.
PMID: 28305382
Wilehm Roux Arch Dev Biol. 1982 May;191(3):185-190. doi: 10.1007/BF00848334.

In order to study the cellular distribution of larval and adult hemoglobins during larval development ofPleurodeles waltlii a double specific immunofluorescent labelling technique was developed.Rabbit antibodies specific for larval and adult hemoglobin components were prepared and conjugated with tetramethyl-rhodamine...

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Flavin M, Ton That H, Deparis P, et al. Hemoglobin switching in the salamanderPleurodeles waltlii : Immunofluorescence detection of larval and adult hemoglobins in single erythrocytes. Wilehm Roux Arch Dev Biol. 1982;191(3):185-190doi: 10.1007/BF00848334.
Flavin, M., Ton That, H., Deparis, P., & Duprat, A. M. (1982). Hemoglobin switching in the salamanderPleurodeles waltlii : Immunofluorescence detection of larval and adult hemoglobins in single erythrocytes. Wilhelm Roux's archives of developmental biology, 191(3), 185-190. https://doi.org/10.1007/BF00848334
Flavin, M, et al. "Hemoglobin switching in the salamanderPleurodeles waltlii : Immunofluorescence detection of larval and adult hemoglobins in single erythrocytes." Wilhelm Roux's archives of developmental biology vol. 191,3 (1982): 185-190. doi: https://doi.org/10.1007/BF00848334
Flavin M, Ton That H, Deparis P, Duprat AM. Hemoglobin switching in the salamanderPleurodeles waltlii : Immunofluorescence detection of larval and adult hemoglobins in single erythrocytes. Wilehm Roux Arch Dev Biol. 1982 May;191(3):185-190. doi: 10.1007/BF00848334. PMID: 28305382.
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The metamorphic switch in hemoglobin phenotype ofXenopus laevis involves erythroid cell replacement.

Roux's archives of developmental biology : the official organ of the EDBO

Weber R, Geiser M, Müller P, Sandmeier E, Wyler T.
PMID: 28305873
Rouxs Arch Dev Biol. 1989 Jun;198(2):57-64. doi: 10.1007/BF02447740.

To elucidate the cellular basis of hemoglobin transition inXenopus laevis the distribution of larval and adult hemoglobins was analyzed by indirect immunofluorescence in the circulating erythrocytes during metamorphosis. In addition, the morphological characteristics as well as the capacity for...

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Weber R, Geiser M, Müller P, et al. The metamorphic switch in hemoglobin phenotype ofXenopus laevis involves erythroid cell replacement. Rouxs Arch Dev Biol. 1989;198(2):57-64doi: 10.1007/BF02447740.
Weber, R., Geiser, M., Müller, P., Sandmeier, E., & Wyler, T. (1989). The metamorphic switch in hemoglobin phenotype ofXenopus laevis involves erythroid cell replacement. Roux's archives of developmental biology : the official organ of the EDBO, 198(2), 57-64. https://doi.org/10.1007/BF02447740
Weber, Rudolf, et al. "The metamorphic switch in hemoglobin phenotype ofXenopus laevis involves erythroid cell replacement." Roux's archives of developmental biology : the official organ of the EDBO vol. 198,2 (1989): 57-64. doi: https://doi.org/10.1007/BF02447740
Weber R, Geiser M, Müller P, Sandmeier E, Wyler T. The metamorphic switch in hemoglobin phenotype ofXenopus laevis involves erythroid cell replacement. Rouxs Arch Dev Biol. 1989 Jun;198(2):57-64. doi: 10.1007/BF02447740. PMID: 28305873.
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Hemoglobin D-Punjab: origin, distribution and laboratory diagnosis.

Revista brasileira de hematologia e hemoterapia

Torres Lde S, Okumura JV, Silva DG, Bonini-Domingos CR.
PMID: 25818823
Rev Bras Hematol Hemoter. 2015 Mar-Apr;37(2):120-6. doi: 10.1016/j.bjhh.2015.02.007. Epub 2015 Feb 23.

This review discusses hemoglobin D-Punjab, also known as hemoglobin D-Los Angeles, one of the most common hemoglobin variants worldwide. It is derived from a point mutation in the beta-globin gene (HBB: c.364G>C; rs33946267) prevalent in the Punjab region, Northwestern...

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Torres Lde S, Okumura JV, Silva DG, et al. Hemoglobin D-Punjab: origin, distribution and laboratory diagnosis. Rev Bras Hematol Hemoter. 2015;37(2):120-6doi: 10.1016/j.bjhh.2015.02.007.
Torres, L. d. e. . S., Okumura, J. V., Silva, D. G., & Bonini-Domingos, C. R. (2015). Hemoglobin D-Punjab: origin, distribution and laboratory diagnosis. Revista brasileira de hematologia e hemoterapia, 37(2), 120-6. https://doi.org/10.1016/j.bjhh.2015.02.007
Torres, Lidiane de Souza, et al. "Hemoglobin D-Punjab: origin, distribution and laboratory diagnosis." Revista brasileira de hematologia e hemoterapia vol. 37,2 (2015): 120-6. doi: https://doi.org/10.1016/j.bjhh.2015.02.007
Torres Lde S, Okumura JV, Silva DG, Bonini-Domingos CR. Hemoglobin D-Punjab: origin, distribution and laboratory diagnosis. Rev Bras Hematol Hemoter. 2015 Mar-Apr;37(2):120-6. doi: 10.1016/j.bjhh.2015.02.007. Epub 2015 Feb 23. PMID: 25818823; PMCID: PMC4382585.
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Expression of alpha and beta Genes of Human Hemoglobin in Escherichia coli.

Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica

Zhang H, Wang QL, Feng Q, Du ZY, Liu XD, Liao XR, Mao BZ.
PMID: 12136180
Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 1999;31(3):289-292.

Total RNA was isolated from human erythrocyte. cDNA fragments coding for alpha and beta genes of human hemoglobins were obtained through RT-PCR and were ligated to plasmid pT7-Blue. Then fragments of alpha and beta genes were cut off and...

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Zhang H, Wang QL, Feng Q, et al. Expression of alpha and beta Genes of Human Hemoglobin in Escherichia coli. Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 1999;31(3):289-292
Zhang, H., Wang, Q. L., Feng, Q., Du, Z. Y., Liu, X. D., Liao, X. R., & Mao, B. Z. (1999). Expression of alpha and beta Genes of Human Hemoglobin in Escherichia coli. Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica, 31(3), 289-292.
Zhang, Hao, et al. "Expression of alpha and beta Genes of Human Hemoglobin in Escherichia coli." Sheng wu hua xue yu sheng wu wu li xue bao Acta biochimica et biophysica Sinica vol. 31,3 (1999): 289-292.
Zhang H, Wang QL, Feng Q, Du ZY, Liu XD, Liao XR, Mao BZ. Expression of alpha and beta Genes of Human Hemoglobin in Escherichia coli. Sheng Wu Hua Xue Yu Sheng Wu Wu Li Xue Bao (Shanghai). 1999;31(3):289-292. PMID: 12136180.
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Ion-exchange microchromatography and thiobarbituric acid colorimetry for the measurement of canine glycated hemoglobins.

Veterinary clinical pathology

Hooghuis H, Rodriguez M, Castaño M.
PMID: 12666011
Vet Clin Pathol. 1994;23(4):110-116. doi: 10.1111/j.1939-165x.1994.tb00918.x.

Nonenzymatic glycation of hemoglobin is a slow, continuous, and irreversible process which takes place during the whole lifespan of the erythrocyte. When hemolytic diseases are ruled out, the levels of glycated hemoglobins reflect the time-averaged serum glucose concentration for...

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Hooghuis H, Rodriguez M, Castaño M. Ion-exchange microchromatography and thiobarbituric acid colorimetry for the measurement of canine glycated hemoglobins. Vet Clin Pathol. 1994;23(4):110-116doi: 10.1111/j.1939-165x.1994.tb00918.x.
Hooghuis, H., Rodriguez, M., & Castaño, M. (1994). Ion-exchange microchromatography and thiobarbituric acid colorimetry for the measurement of canine glycated hemoglobins. Veterinary clinical pathology, 23(4), 110-116. https://doi.org/10.1111/j.1939-165x.1994.tb00918.x
Hooghuis, H., et al. "Ion-exchange microchromatography and thiobarbituric acid colorimetry for the measurement of canine glycated hemoglobins." Veterinary clinical pathology vol. 23,4 (1994): 110-116. doi: https://doi.org/10.1111/j.1939-165x.1994.tb00918.x
Hooghuis H, Rodriguez M, Castaño M. Ion-exchange microchromatography and thiobarbituric acid colorimetry for the measurement of canine glycated hemoglobins. Vet Clin Pathol. 1994;23(4):110-116. doi: 10.1111/j.1939-165x.1994.tb00918.x. PMID: 12666011.
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The Alkaline Transition of Bis(N-acetylated) Heme Undecapeptide.

Inorganic chemistry

Carraway AD, Miller GT, Pearce LL, Peterson J.
PMID: 11670617
Inorg Chem. 1998 Sep 07;37(18):4654-4661. doi: 10.1021/ic971391u.

Alkaline forms of the ferric bis(N-acetylated) heme undecapeptide of cytochrome c (N-ac-HUP) and some of its derivatives have been studied by electronic absorption and electron paramagnetic resonance spectroscopies. Surprisingly, even at pH >12, no evidence could be found for...

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Carraway AD, Miller GT, Pearce LL, et al. The Alkaline Transition of Bis(N-acetylated) Heme Undecapeptide. Inorg Chem. 1998;37(18):4654-4661doi: 10.1021/ic971391u.
Carraway, A. D., Miller, G. T., Pearce, L. L., & Peterson, J. (1998). The Alkaline Transition of Bis(N-acetylated) Heme Undecapeptide. Inorganic chemistry, 37(18), 4654-4661. https://doi.org/10.1021/ic971391u
Carraway, Angela D., et al. "The Alkaline Transition of Bis(N-acetylated) Heme Undecapeptide." Inorganic chemistry vol. 37,18 (1998): 4654-4661. doi: https://doi.org/10.1021/ic971391u
Carraway AD, Miller GT, Pearce LL, Peterson J. The Alkaline Transition of Bis(N-acetylated) Heme Undecapeptide. Inorg Chem. 1998 Sep 07;37(18):4654-4661. doi: 10.1021/ic971391u. PMID: 11670617.
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Reptilian hemoglobins: N-terminal sequence of an alpha-chain of viper (Vipera aspis) hemoglobin.

FEBS letters

Duguet M, Chauvet J, Acher R.
PMID: 11946117
FEBS Lett. 1971 Nov 01;18(2):185-188. doi: 10.1016/0014-5793(71)80441-6.

No abstract available.

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Duguet M, Chauvet J, Acher R. Reptilian hemoglobins: N-terminal sequence of an alpha-chain of viper (Vipera aspis) hemoglobin. FEBS Lett. 1971;18(2):185-188doi: 10.1016/0014-5793(71)80441-6.
Duguet, M., Chauvet, J., & Acher, R. (1971). Reptilian hemoglobins: N-terminal sequence of an alpha-chain of viper (Vipera aspis) hemoglobin. FEBS letters, 18(2), 185-188. https://doi.org/10.1016/0014-5793(71)80441-6
Duguet, M, et al. "Reptilian hemoglobins: N-terminal sequence of an alpha-chain of viper (Vipera aspis) hemoglobin." FEBS letters vol. 18,2 (1971): 185-188. doi: https://doi.org/10.1016/0014-5793(71)80441-6
Duguet M, Chauvet J, Acher R. Reptilian hemoglobins: N-terminal sequence of an alpha-chain of viper (Vipera aspis) hemoglobin. FEBS Lett. 1971 Nov 01;18(2):185-188. doi: 10.1016/0014-5793(71)80441-6. PMID: 11946117.
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Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions.

Plant science : an international journal of experimental plant biology

Lira-Ruan V, Sarath G, Klucas RV, Arredondo-Peter R.
PMID: 11448759
Plant Sci. 2001 Jul;161(2):279-287. doi: 10.1016/s0168-9452(01)00411-3.

In rice (Oryza sativa var. Jackson) at least three copies of hemoglobin (hb) gene exist. Rice hb1 and hb2 genes are differentially expressed in roots and leaves from mature plants. We used polyclonal antibodies raised to recombinant rice Hb1...

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Lira-Ruan V, Sarath G, Klucas RV, et al. Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions. Plant Sci. 2001;161(2):279-287doi: 10.1016/s0168-9452(01)00411-3.
Lira-Ruan, V., Sarath, G., Klucas, R. V., & Arredondo-Peter, R. (2001). Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions. Plant science : an international journal of experimental plant biology, 161(2), 279-287. https://doi.org/10.1016/s0168-9452(01)00411-3
Lira-Ruan, V, et al. "Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions." Plant science : an international journal of experimental plant biology vol. 161,2 (2001): 279-287. doi: https://doi.org/10.1016/s0168-9452(01)00411-3
Lira-Ruan V, Sarath G, Klucas RV, Arredondo-Peter R. Synthesis of hemoglobins in rice (Oryza sativa var. Jackson) plants growing in normal and stress conditions. Plant Sci. 2001 Jul;161(2):279-287. doi: 10.1016/s0168-9452(01)00411-3. PMID: 11448759.
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Showing 1 to 12 of 196 entries