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Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia.

Nature plants

Kubo K, Paape T, Hatakeyama M, Entani T, Takara A, Kajihara K, Tsukahara M, Shimizu-Inatsugi R, Shimizu KK, Takayama S.
PMID: 27246052
Nat Plants. 2015 Jan 08;1:14005. doi: 10.1038/nplants.2014.5.

Self-incompatibility (SI) systems in flowering plants distinguish self- and non-self pollen to prevent inbreeding. While other SI systems rely on the self-recognition between specific male- and female-determinants, the Solanaceae family has a non-self recognition system resulting in the detoxification...

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Kubo K, Paape T, Hatakeyama M, et al. Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia. Nat Plants. 2015;1:14005doi: 10.1038/nplants.2014.5.
Kubo, K., Paape, T., Hatakeyama, M., Entani, T., Takara, A., Kajihara, K., Tsukahara, M., Shimizu-Inatsugi, R., Shimizu, K. K., & Takayama, S. (2015). Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia. Nature plants, 114005. https://doi.org/10.1038/nplants.2014.5
Kubo, Ken-Ichi, et al. "Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia." Nature plants vol. 1 (2015): 14005. doi: https://doi.org/10.1038/nplants.2014.5
Kubo K, Paape T, Hatakeyama M, Entani T, Takara A, Kajihara K, Tsukahara M, Shimizu-Inatsugi R, Shimizu KK, Takayama S. Gene duplication and genetic exchange drive the evolution of S-RNase-based self-incompatibility in Petunia. Nat Plants. 2015 Jan 08;1:14005. doi: 10.1038/nplants.2014.5. PMID: 27246052.
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Particle-mediated Intravenous Delivery of Antigen mRNA Results in Strong Antigen-specific T-cell Responses Despite the Induction of Type I Interferon.

Molecular therapy. Nucleic acids

Broos K, Van der Jeught K, Puttemans J, Goyvaerts C, Heirman C, Dewitte H, Verbeke R, Lentacker I, Thielemans K, Breckpot K.
PMID: 27327138
Mol Ther Nucleic Acids. 2016 Jun 21;5(6):e326. doi: 10.1038/mtna.2016.38.

Cancer vaccines based on mRNA are extensively studied. The fragile nature of mRNA has instigated research into carriers that can protect it from ribonucleases and as such enable its systemic use. However, carrier-mediated delivery of mRNA has been linked...

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Broos K, Van der Jeught K, Puttemans J, et al. Particle-mediated Intravenous Delivery of Antigen mRNA Results in Strong Antigen-specific T-cell Responses Despite the Induction of Type I Interferon. Mol Ther Nucleic Acids. 2016;5(6):e326doi: 10.1038/mtna.2016.38.
Broos, K., Van der Jeught, K., Puttemans, J., Goyvaerts, C., Heirman, C., Dewitte, H., Verbeke, R., Lentacker, I., Thielemans, K., & Breckpot, K. (2016). Particle-mediated Intravenous Delivery of Antigen mRNA Results in Strong Antigen-specific T-cell Responses Despite the Induction of Type I Interferon. Molecular therapy. Nucleic acids, 5(6), e326. https://doi.org/10.1038/mtna.2016.38
Broos, Katrijn, et al. "Particle-mediated Intravenous Delivery of Antigen mRNA Results in Strong Antigen-specific T-cell Responses Despite the Induction of Type I Interferon." Molecular therapy. Nucleic acids vol. 5,6 (2016): e326. doi: https://doi.org/10.1038/mtna.2016.38
Broos K, Van der Jeught K, Puttemans J, Goyvaerts C, Heirman C, Dewitte H, Verbeke R, Lentacker I, Thielemans K, Breckpot K. Particle-mediated Intravenous Delivery of Antigen mRNA Results in Strong Antigen-specific T-cell Responses Despite the Induction of Type I Interferon. Mol Ther Nucleic Acids. 2016 Jun 21;5(6):e326. doi: 10.1038/mtna.2016.38. PMID: 27327138; PMCID: PMC5022130.
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XRN1: A Major 5' to 3' Exoribonuclease in Eukaryotic Cells.

The Enzymes

Geisler S, Coller J.
PMID: 27166442
Enzymes. 2012;31:97-114. doi: 10.1016/B978-0-12-404740-2.00005-7. Epub 2012 Sep 29.

The degradation of RNA is a critical aspect of gene regulation. Correspondingly, ribonucleases exist within the cell to degrade RNA in specific cellular contexts. An important and conserved ribonuclease is called XRN1. This enzyme, an exoribonuclease, degrades RNA in...

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Geisler S, Coller J. XRN1: A Major 5' to 3' Exoribonuclease in Eukaryotic Cells. Enzymes. 2012;31:97-114doi: 10.1016/B978-0-12-404740-2.00005-7.
Geisler, S., & Coller, J. (2012). XRN1: A Major 5' to 3' Exoribonuclease in Eukaryotic Cells. The Enzymes, 3197-114. https://doi.org/10.1016/B978-0-12-404740-2.00005-7
Geisler, Sarah, and Coller, Jeff. "XRN1: A Major 5' to 3' Exoribonuclease in Eukaryotic Cells." The Enzymes vol. 31 (2012): 97-114. doi: https://doi.org/10.1016/B978-0-12-404740-2.00005-7
Geisler S, Coller J. XRN1: A Major 5' to 3' Exoribonuclease in Eukaryotic Cells. Enzymes. 2012;31:97-114. doi: 10.1016/B978-0-12-404740-2.00005-7. Epub 2012 Sep 29. PMID: 27166442.
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Corrigendum: MazF ribonucleases promote Mycobacterium tuberculosis drug tolerance and virulence in guinea pigs.

Nature communications

Tiwari P, Arora G, Singh M, Kidwai S, Narayan OP, Singh R.
PMID: 25976082
Nat Commun. 2015 May 15;6:7273. doi: 10.1038/ncomms8273.

No abstract available.

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Tiwari P, Arora G, Singh M, et al. Corrigendum: MazF ribonucleases promote Mycobacterium tuberculosis drug tolerance and virulence in guinea pigs. Nat Commun. 2015;6:7273doi: 10.1038/ncomms8273.
Tiwari, P., Arora, G., Singh, M., Kidwai, S., Narayan, O. P., & Singh, R. (2015). Corrigendum: MazF ribonucleases promote Mycobacterium tuberculosis drug tolerance and virulence in guinea pigs. Nature communications, 67273. https://doi.org/10.1038/ncomms8273
Tiwari, Prabhakar, et al. "Corrigendum: MazF ribonucleases promote Mycobacterium tuberculosis drug tolerance and virulence in guinea pigs." Nature communications vol. 6 (2015): 7273. doi: https://doi.org/10.1038/ncomms8273
Tiwari P, Arora G, Singh M, Kidwai S, Narayan OP, Singh R. Corrigendum: MazF ribonucleases promote Mycobacterium tuberculosis drug tolerance and virulence in guinea pigs. Nat Commun. 2015 May 15;6:7273. doi: 10.1038/ncomms8273. PMID: 25976082.
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mRNA degradation and maturation in prokaryotes: the global players.

Biomolecular concepts

Laalami S, Putzer H.
PMID: 25962050
Biomol Concepts. 2011 Dec 01;2(6):491-506. doi: 10.1515/BMC.2011.042.

The degradation of messenger RNA is of universal importance for controlling gene expression. It directly affects protein synthesis by modulating the amount of mRNA available for translation. Regulation of mRNA decay provides an efficient means to produce just the...

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Laalami S, Putzer H. mRNA degradation and maturation in prokaryotes: the global players. Biomol Concepts. 2011;2(6):491-506doi: 10.1515/BMC.2011.042.
Laalami, S., & Putzer, H. (2011). mRNA degradation and maturation in prokaryotes: the global players. Biomolecular concepts, 2(6), 491-506. https://doi.org/10.1515/BMC.2011.042
Laalami, Soumaya, and Putzer, Harald. "mRNA degradation and maturation in prokaryotes: the global players." Biomolecular concepts vol. 2,6 (2011): 491-506. doi: https://doi.org/10.1515/BMC.2011.042
Laalami S, Putzer H. mRNA degradation and maturation in prokaryotes: the global players. Biomol Concepts. 2011 Dec 01;2(6):491-506. doi: 10.1515/BMC.2011.042. PMID: 25962050.
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Action of the Style Product of the Self-Incompatibility Gene of Nicotiana alata (S-RNase) on in Vitro-Grown Pollen Tubes.

The Plant cell

Gray JE, McClure BA, Bonig I, Anderson MA, Clarke AE.
PMID: 12324597
Plant Cell. 1991 Mar;3(3):271-283. doi: 10.1105/tpc.3.3.271.

The products of the S-locus expressed in female tissues of Nicotiana alata are ribonucleases (S-RNases). The arrest of growth of incompatible pollen tubes in styles may result from entry of the S-RNase into the pollen tube and degradation of...

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Gray JE, McClure BA, Bonig I, et al. Action of the Style Product of the Self-Incompatibility Gene of Nicotiana alata (S-RNase) on in Vitro-Grown Pollen Tubes. Plant Cell. 1991;3(3):271-283doi: 10.1105/tpc.3.3.271.
Gray, J. E., McClure, B. A., Bonig, I., Anderson, M. A., & Clarke, A. E. (1991). Action of the Style Product of the Self-Incompatibility Gene of Nicotiana alata (S-RNase) on in Vitro-Grown Pollen Tubes. The Plant cell, 3(3), 271-283. https://doi.org/10.1105/tpc.3.3.271
Gray, J. E., et al. "Action of the Style Product of the Self-Incompatibility Gene of Nicotiana alata (S-RNase) on in Vitro-Grown Pollen Tubes." The Plant cell vol. 3,3 (1991): 271-283. doi: https://doi.org/10.1105/tpc.3.3.271
Gray JE, McClure BA, Bonig I, Anderson MA, Clarke AE. Action of the Style Product of the Self-Incompatibility Gene of Nicotiana alata (S-RNase) on in Vitro-Grown Pollen Tubes. Plant Cell. 1991 Mar;3(3):271-283. doi: 10.1105/tpc.3.3.271. PMID: 12324597; PMCID: PMC159998.
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Action of dimeric ribonucleases on double-stranded RNA.

FEBS letters

D'Alessio G, Zofra S, Libonati M.
PMID: 11946706
FEBS Lett. 1972 Aug 15;24(3):355-358. doi: 10.1016/0014-5793(72)80390-9.

No abstract available.

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D'Alessio G, Zofra S, Libonati M. Action of dimeric ribonucleases on double-stranded RNA. FEBS Lett. 1972;24(3):355-358doi: 10.1016/0014-5793(72)80390-9.
D'Alessio, G., Zofra, S., & Libonati, M. (1972). Action of dimeric ribonucleases on double-stranded RNA. FEBS letters, 24(3), 355-358. https://doi.org/10.1016/0014-5793(72)80390-9
D'Alessio, G, et al. "Action of dimeric ribonucleases on double-stranded RNA." FEBS letters vol. 24,3 (1972): 355-358. doi: https://doi.org/10.1016/0014-5793(72)80390-9
D'Alessio G, Zofra S, Libonati M. Action of dimeric ribonucleases on double-stranded RNA. FEBS Lett. 1972 Aug 15;24(3):355-358. doi: 10.1016/0014-5793(72)80390-9. PMID: 11946706.
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MicroRNAs in gene regulation: when the smallest governs it all.

Journal of biomedicine & biotechnology

Ouellet DL, Perron MP, Gobeil LA, Plante P, Provost P.
PMID: 17057368
J Biomed Biotechnol. 2006;2006(4):69616. doi: 10.1155/JBB/2006/69616.

Encoded by the genome of most eukaryotes examined so far, microRNAs (miRNAs) are small approximately 21-nucleotide (nt) noncoding RNAs (ncRNAs) derived from a biosynthetic cascade involving sequential processing steps executed by the ribonucleases (RNases) III Drosha and Dicer. Following...

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Ouellet DL, Perron MP, Gobeil LA, et al. MicroRNAs in gene regulation: when the smallest governs it all. J Biomed Biotechnol. 2006;2006(4):69616doi: 10.1155/JBB/2006/69616.
Ouellet, D. L., Perron, M. P., Gobeil, L. A., Plante, P., & Provost, P. (2006). MicroRNAs in gene regulation: when the smallest governs it all. Journal of biomedicine & biotechnology, 2006(4), 69616. https://doi.org/10.1155/JBB/2006/69616
Ouellet, Dominique L, et al. "MicroRNAs in gene regulation: when the smallest governs it all." Journal of biomedicine & biotechnology vol. 2006,4 (2006): 69616. doi: https://doi.org/10.1155/JBB/2006/69616
Ouellet DL, Perron MP, Gobeil LA, Plante P, Provost P. MicroRNAs in gene regulation: when the smallest governs it all. J Biomed Biotechnol. 2006;2006(4):69616. doi: 10.1155/JBB/2006/69616. PMID: 17057368; PMCID: PMC1559927.
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Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus.

International journal of microbiology

Anderson KL, Dunman PM.
PMID: 19936110
Int J Microbiol. 2009;2009:525491. doi: 10.1155/2009/525491. Epub 2009 Mar 05.

The regulation of mRNA turnover is a recently appreciated phenomenon by which bacteria modulate gene expression. This review outlines the mechanisms by which three major classes of bacterial trans-acting factors, ribonucleases (RNases), RNA binding proteins, and small noncoding RNAs...

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Anderson KL, Dunman PM. Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus. Int J Microbiol. 2009;2009:525491doi: 10.1155/2009/525491.
Anderson, K. L., & Dunman, P. M. (2009). Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus. International journal of microbiology, 2009525491. https://doi.org/10.1155/2009/525491
Anderson, Kelsi L, and Dunman, Paul M. "Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus." International journal of microbiology vol. 2009 (2009): 525491. doi: https://doi.org/10.1155/2009/525491
Anderson KL, Dunman PM. Messenger RNA Turnover Processes in Escherichia coli, Bacillus subtilis, and Emerging Studies in Staphylococcus aureus. Int J Microbiol. 2009;2009:525491. doi: 10.1155/2009/525491. Epub 2009 Mar 05. PMID: 19936110; PMCID: PMC2777011.
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Multicomponent synthesis of artificial nucleases and their RNase and DNase activity.

Beilstein journal of organic chemistry

Gulevich AV, Koroleva LS, Morozova OV, Bakhvalova VN, Silnikov VN, Nenajdenko VG.
PMID: 21915218
Beilstein J Org Chem. 2011;7:1135-40. doi: 10.3762/bjoc.7.131. Epub 2011 Aug 19.

The synthesis of new, artificial ribonucleases containing two amino acid residues connected by an aliphatic linker has been developed. Target molecules were synthesized via a catalytic three-component Ugi reaction from aliphatic diisocyanides. Preliminary investigations proved unspecific nuclease activity of...

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Gulevich AV, Koroleva LS, Morozova OV, et al. Multicomponent synthesis of artificial nucleases and their RNase and DNase activity. Beilstein J Org Chem. 2011;7:1135-40doi: 10.3762/bjoc.7.131.
Gulevich, A. V., Koroleva, L. S., Morozova, O. V., Bakhvalova, V. N., Silnikov, V. N., & Nenajdenko, V. G. (2011). Multicomponent synthesis of artificial nucleases and their RNase and DNase activity. Beilstein journal of organic chemistry, 71135-40. https://doi.org/10.3762/bjoc.7.131
Gulevich, Anton V, et al. "Multicomponent synthesis of artificial nucleases and their RNase and DNase activity." Beilstein journal of organic chemistry vol. 7 (2011): 1135-40. doi: https://doi.org/10.3762/bjoc.7.131
Gulevich AV, Koroleva LS, Morozova OV, Bakhvalova VN, Silnikov VN, Nenajdenko VG. Multicomponent synthesis of artificial nucleases and their RNase and DNase activity. Beilstein J Org Chem. 2011;7:1135-40. doi: 10.3762/bjoc.7.131. Epub 2011 Aug 19. PMID: 21915218; PMCID: PMC3170195.
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In-vitro translation of messenger-RNA from developing bean leaves. Evidence for the existence of stored messenger-RNA and its light-induced mobilisation into polyribosomes.

Planta

Giles AB, Grierson D, Smith H.
PMID: 24420223
Planta. 1977 Jan;136(1):31-6. doi: 10.1007/BF00387921.

Poly(A)-containing messenger RNA was purified from polyribosomes isolated from the primary leaves of 7-day-old dark-grown seedlings of Phaseolus vulgaris var. Masterpiece. Analysis of the messenger RNA on 2.4% polyacrylamide gels showed that it consists of a heterogeneous population of...

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Giles AB, Grierson D, Smith H. In-vitro translation of messenger-RNA from developing bean leaves. Evidence for the existence of stored messenger-RNA and its light-induced mobilisation into polyribosomes. Planta. 1977;136(1):31-6doi: 10.1007/BF00387921.
Giles, A. B., Grierson, D., & Smith, H. (1977). In-vitro translation of messenger-RNA from developing bean leaves. Evidence for the existence of stored messenger-RNA and its light-induced mobilisation into polyribosomes. Planta, 136(1), 31-6. https://doi.org/10.1007/BF00387921
Giles, A B, et al. "In-vitro translation of messenger-RNA from developing bean leaves. Evidence for the existence of stored messenger-RNA and its light-induced mobilisation into polyribosomes." Planta vol. 136,1 (1977): 31-6. doi: https://doi.org/10.1007/BF00387921
Giles AB, Grierson D, Smith H. In-vitro translation of messenger-RNA from developing bean leaves. Evidence for the existence of stored messenger-RNA and its light-induced mobilisation into polyribosomes. Planta. 1977 Jan;136(1):31-6. doi: 10.1007/BF00387921. PMID: 24420223.
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Genetic recombination in plant-infecting messenger-sense RNA viruses: overview and research perspectives.

Frontiers in plant science

Bujarski JJ.
PMID: 23533000
Front Plant Sci. 2013 Mar 26;4:68. doi: 10.3389/fpls.2013.00068. eCollection 2013.

RNA recombination is one of the driving forces of genetic variability in (+)-strand RNA viruses. Various types of RNA-RNA crossovers were described including crosses between the same or different viral RNAs or between viral and cellular RNAs. Likewise, a...

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Bujarski JJ. Genetic recombination in plant-infecting messenger-sense RNA viruses: overview and research perspectives. Front Plant Sci. 2013;4:68doi: 10.3389/fpls.2013.00068.
Bujarski, J. J. (2013). Genetic recombination in plant-infecting messenger-sense RNA viruses: overview and research perspectives. Frontiers in plant science, 468. https://doi.org/10.3389/fpls.2013.00068
Bujarski, Jozef J. "Genetic recombination in plant-infecting messenger-sense RNA viruses: overview and research perspectives." Frontiers in plant science vol. 4 (2013): 68. doi: https://doi.org/10.3389/fpls.2013.00068
Bujarski JJ. Genetic recombination in plant-infecting messenger-sense RNA viruses: overview and research perspectives. Front Plant Sci. 2013 Mar 26;4:68. doi: 10.3389/fpls.2013.00068. eCollection 2013. PMID: 23533000; PMCID: PMC3607795.
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Showing 1 to 12 of 137 entries