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Transcriptome skimming of lentil (Lens culinaris Medikus) cultivars with contrast reaction to salt stress.

Functional & integrative genomics

Singh D, Singh CK, Taunk J, Sharma S, Gaikwad K, Singh V, Sanwal SK, Singh D, Sharma PC, Pal M.
PMID: 33389259
Funct Integr Genomics. 2021 Jan;21(1):139-156. doi: 10.1007/s10142-020-00766-5. Epub 2021 Jan 03.

Extensive transcriptomic skimming was conducted to decipher molecular, morphological, physiological, and biochemical responses in salt-tolerant (PDL-1) and salt-sensitive (L-4076) cultivars under control (0 mM NaCl) and salinity stress (120 mM NaCl) conditions at seedling stage. Morphological, physiological, and biochemical...

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Singh D, Singh CK, Taunk J, et al. Transcriptome skimming of lentil (Lens culinaris Medikus) cultivars with contrast reaction to salt stress. Funct Integr Genomics. 2021;21(1):139-156doi: 10.1007/s10142-020-00766-5.
Singh, D., Singh, C. K., Taunk, J., Sharma, S., Gaikwad, K., Singh, V., Sanwal, S. K., Singh, D., Sharma, P. C., & Pal, M. (2021). Transcriptome skimming of lentil (Lens culinaris Medikus) cultivars with contrast reaction to salt stress. Functional & integrative genomics, 21(1), 139-156. https://doi.org/10.1007/s10142-020-00766-5
Singh, Dharmendra, et al. "Transcriptome skimming of lentil (Lens culinaris Medikus) cultivars with contrast reaction to salt stress." Functional & integrative genomics vol. 21,1 (2021): 139-156. doi: https://doi.org/10.1007/s10142-020-00766-5
Singh D, Singh CK, Taunk J, Sharma S, Gaikwad K, Singh V, Sanwal SK, Singh D, Sharma PC, Pal M. Transcriptome skimming of lentil (Lens culinaris Medikus) cultivars with contrast reaction to salt stress. Funct Integr Genomics. 2021 Jan;21(1):139-156. doi: 10.1007/s10142-020-00766-5. Epub 2021 Jan 03. PMID: 33389259.
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Comparative physiological and transcriptomic analysis reveals salinity tolerance mechanisms in Sorghum bicolor (L.) Moench.

Planta

Ukwatta J, Pabuayon ICM, Park J, Chen J, Chai X, Zhang H, Zhu JK, Xin Z, Shi H.
PMID: 34657208
Planta. 2021 Oct 16;254(5):98. doi: 10.1007/s00425-021-03750-w.

MAIN CONCLUSION: Mota Maradi is a sorghum line that exhibits holistic salinity tolerance mechanisms, making it a viable potential donor in breeding efforts for improved sorghum lines. High soil salinity is one of the global challenges for crop growth...

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Ukwatta J, Pabuayon ICM, Park J, et al. Comparative physiological and transcriptomic analysis reveals salinity tolerance mechanisms in Sorghum bicolor (L.) Moench. Planta. 2021;254(5):98doi: 10.1007/s00425-021-03750-w.
Ukwatta, J., Pabuayon, I. C. M., Park, J., Chen, J., Chai, X., Zhang, H., Zhu, J. K., Xin, Z., & Shi, H. (2021). Comparative physiological and transcriptomic analysis reveals salinity tolerance mechanisms in Sorghum bicolor (L.) Moench. Planta, 254(5), 98. https://doi.org/10.1007/s00425-021-03750-w
Ukwatta, Jayan, et al. "Comparative physiological and transcriptomic analysis reveals salinity tolerance mechanisms in Sorghum bicolor (L.) Moench." Planta vol. 254,5 (2021): 98. doi: https://doi.org/10.1007/s00425-021-03750-w
Ukwatta J, Pabuayon ICM, Park J, Chen J, Chai X, Zhang H, Zhu JK, Xin Z, Shi H. Comparative physiological and transcriptomic analysis reveals salinity tolerance mechanisms in Sorghum bicolor (L.) Moench. Planta. 2021 Oct 16;254(5):98. doi: 10.1007/s00425-021-03750-w. PMID: 34657208.
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Nanoparticles potentially mediate salt stress tolerance in plants.

Plant physiology and biochemistry : PPB

Zulfiqar F, Ashraf M.
PMID: 33529801
Plant Physiol Biochem. 2021 Mar;160:257-268. doi: 10.1016/j.plaphy.2021.01.028. Epub 2021 Jan 23.

In the era of climate change, salt stress is a promising threat to agriculture, limiting crop production via imposing primary effects such as osmotic and ionic, as well as secondary effects such as oxidative stress, perturbance in hormonal homeostasis,...

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Zulfiqar F, Ashraf M. Nanoparticles potentially mediate salt stress tolerance in plants. Plant Physiol Biochem. 2021;160:257-268doi: 10.1016/j.plaphy.2021.01.028.
Zulfiqar, F., & Ashraf, M. (2021). Nanoparticles potentially mediate salt stress tolerance in plants. Plant physiology and biochemistry : PPB, 160257-268. https://doi.org/10.1016/j.plaphy.2021.01.028
Zulfiqar, Faisal, and Ashraf, Muhammad. "Nanoparticles potentially mediate salt stress tolerance in plants." Plant physiology and biochemistry : PPB vol. 160 (2021): 257-268. doi: https://doi.org/10.1016/j.plaphy.2021.01.028
Zulfiqar F, Ashraf M. Nanoparticles potentially mediate salt stress tolerance in plants. Plant Physiol Biochem. 2021 Mar;160:257-268. doi: 10.1016/j.plaphy.2021.01.028. Epub 2021 Jan 23. PMID: 33529801.
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Early responses to salt stress in quinoa genotypes with opposite behavior.

Physiologia plantarum

Vita F, Ghignone S, Bazihizina N, Rasouli F, Sabbatini L, Kiani-Pouya A, Kiferle C, Shabala S, Balestrini R, Mancuso S.
PMID: 33847396
Physiol Plant. 2021 Dec;173(4):1392-1420. doi: 10.1111/ppl.13425. Epub 2021 May 09.

Soil salinity is among the major abiotic stresses that plants must cope with, mainly in arid and semiarid regions. The tolerance to high salinity is an important agronomic trait to sustain food production. Quinoa is a halophytic annual pseudo-cereal...

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Vita F, Ghignone S, Bazihizina N, et al. Early responses to salt stress in quinoa genotypes with opposite behavior. Physiol Plant. 2021;173(4):1392-1420doi: 10.1111/ppl.13425.
Vita, F., Ghignone, S., Bazihizina, N., Rasouli, F., Sabbatini, L., Kiani-Pouya, A., Kiferle, C., Shabala, S., Balestrini, R., & Mancuso, S. (2021). Early responses to salt stress in quinoa genotypes with opposite behavior. Physiologia plantarum, 173(4), 1392-1420. https://doi.org/10.1111/ppl.13425
Vita, Federico, et al. "Early responses to salt stress in quinoa genotypes with opposite behavior." Physiologia plantarum vol. 173,4 (2021): 1392-1420. doi: https://doi.org/10.1111/ppl.13425
Vita F, Ghignone S, Bazihizina N, Rasouli F, Sabbatini L, Kiani-Pouya A, Kiferle C, Shabala S, Balestrini R, Mancuso S. Early responses to salt stress in quinoa genotypes with opposite behavior. Physiol Plant. 2021 Dec;173(4):1392-1420. doi: 10.1111/ppl.13425. Epub 2021 May 09. PMID: 33847396.
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Halophytes and other molecular strategies for the generation of salt-tolerant crops.

Plant physiology and biochemistry : PPB

Barros NLF, Marques DN, Tadaiesky LBA, de Souza CRB.
PMID: 33773233
Plant Physiol Biochem. 2021 May;162:581-591. doi: 10.1016/j.plaphy.2021.03.028. Epub 2021 Mar 18.

The current increase in salinity can intensify the disparity between potential and actual crop yields, thus affecting economies and food security. One of the mitigating alternatives is plant breeding via biotechnology, where advances achieved so far are significant. Considering...

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Barros NLF, Marques DN, Tadaiesky LBA, et al. Halophytes and other molecular strategies for the generation of salt-tolerant crops. Plant Physiol Biochem. 2021;162:581-591doi: 10.1016/j.plaphy.2021.03.028.
Barros, N. L. F., Marques, D. N., Tadaiesky, L. B. A., & de Souza, C. R. B. (2021). Halophytes and other molecular strategies for the generation of salt-tolerant crops. Plant physiology and biochemistry : PPB, 162581-591. https://doi.org/10.1016/j.plaphy.2021.03.028
Barros, Nicolle Louise Ferreira, et al. "Halophytes and other molecular strategies for the generation of salt-tolerant crops." Plant physiology and biochemistry : PPB vol. 162 (2021): 581-591. doi: https://doi.org/10.1016/j.plaphy.2021.03.028
Barros NLF, Marques DN, Tadaiesky LBA, de Souza CRB. Halophytes and other molecular strategies for the generation of salt-tolerant crops. Plant Physiol Biochem. 2021 May;162:581-591. doi: 10.1016/j.plaphy.2021.03.028. Epub 2021 Mar 18. PMID: 33773233.
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Transcriptomic analysis of Aegilops tauschii during long-term salinity stress.

Functional & integrative genomics

Mansouri M, Naghavi MR, Alizadeh H, Mohammadi-Nejad G, Mousavi SA, Salekdeh GH, Tada Y.
PMID: 29931612
Funct Integr Genomics. 2019 Jan;19(1):13-28. doi: 10.1007/s10142-018-0623-y. Epub 2018 Jun 21.

Aegilops tauschii is the diploid progenitor of the bread wheat D-genome. It originated from Iran and is a source of abiotic stress tolerance genes. However, little is known about the molecular events of salinity tolerance in Ae. tauschii. This...

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Mansouri M, Naghavi MR, Alizadeh H, et al. Transcriptomic analysis of Aegilops tauschii during long-term salinity stress. Funct Integr Genomics. 2018;19(1):13-28doi: 10.1007/s10142-018-0623-y.
Mansouri, M., Naghavi, M. R., Alizadeh, H., Mohammadi-Nejad, G., Mousavi, S. A., Salekdeh, G. H., & Tada, Y. (2019). Transcriptomic analysis of Aegilops tauschii during long-term salinity stress. Functional & integrative genomics, 19(1), 13-28. https://doi.org/10.1007/s10142-018-0623-y
Mansouri, Mehdi, et al. "Transcriptomic analysis of Aegilops tauschii during long-term salinity stress." Functional & integrative genomics vol. 19,1 (2019): 13-28. doi: https://doi.org/10.1007/s10142-018-0623-y
Mansouri M, Naghavi MR, Alizadeh H, Mohammadi-Nejad G, Mousavi SA, Salekdeh GH, Tada Y. Transcriptomic analysis of Aegilops tauschii during long-term salinity stress. Funct Integr Genomics. 2019 Jan;19(1):13-28. doi: 10.1007/s10142-018-0623-y. Epub 2018 Jun 21. PMID: 29931612.
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Isolation and characterization of a salt-tolerant denitrifying bacterium Alishewanella sp. F2 from seawall muddy water.

Scientific reports

Cheng R, Wang X, Zhu H, Yan B, Shutes B, Xu Y, Fu B, Wen H.
PMID: 32561802
Sci Rep. 2020 Jun 19;10(1):10002. doi: 10.1038/s41598-020-66989-5.

A salt-tolerant denitrifying bacterium strain F2 was isolated from seawall muddy water in Dalian City, Liaoning Province, China. Strain F2 was identified by morphological observations, physiological and biochemical characteristics and 16 S rDNA identification. The salt tolerance of strain...

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Cheng R, Wang X, Zhu H, et al. Isolation and characterization of a salt-tolerant denitrifying bacterium Alishewanella sp. F2 from seawall muddy water. Sci Rep. 2020;10(1):10002doi: 10.1038/s41598-020-66989-5.
Cheng, R., Wang, X., Zhu, H., Yan, B., Shutes, B., Xu, Y., Fu, B., & Wen, H. (2020). Isolation and characterization of a salt-tolerant denitrifying bacterium Alishewanella sp. F2 from seawall muddy water. Scientific reports, 10(1), 10002. https://doi.org/10.1038/s41598-020-66989-5
Cheng, Rui, et al. "Isolation and characterization of a salt-tolerant denitrifying bacterium Alishewanella sp. F2 from seawall muddy water." Scientific reports vol. 10,1 (2020): 10002. doi: https://doi.org/10.1038/s41598-020-66989-5
Cheng R, Wang X, Zhu H, Yan B, Shutes B, Xu Y, Fu B, Wen H. Isolation and characterization of a salt-tolerant denitrifying bacterium Alishewanella sp. F2 from seawall muddy water. Sci Rep. 2020 Jun 19;10(1):10002. doi: 10.1038/s41598-020-66989-5. PMID: 32561802; PMCID: PMC7305158.
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Gene regulation at transcriptional and post-transcriptional levels to combat salt stress in plants.

Physiologia plantarum

Singh A, Roychoudhury A.
PMID: 34260753
Physiol Plant. 2021 Dec;173(4):1556-1572. doi: 10.1111/ppl.13502. Epub 2021 Jul 26.

Soil salinity is a major challenge that will be faced more and more by human population in the near future. Higher salt concentrations in the soil limit the growth and production of crops, which poses serious threats to global...

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Singh A, Roychoudhury A. Gene regulation at transcriptional and post-transcriptional levels to combat salt stress in plants. Physiol Plant. 2021;173(4):1556-1572doi: 10.1111/ppl.13502.
Singh, A., & Roychoudhury, A. (2021). Gene regulation at transcriptional and post-transcriptional levels to combat salt stress in plants. Physiologia plantarum, 173(4), 1556-1572. https://doi.org/10.1111/ppl.13502
Singh, Ankur, and Roychoudhury, Aryadeep. "Gene regulation at transcriptional and post-transcriptional levels to combat salt stress in plants." Physiologia plantarum vol. 173,4 (2021): 1556-1572. doi: https://doi.org/10.1111/ppl.13502
Singh A, Roychoudhury A. Gene regulation at transcriptional and post-transcriptional levels to combat salt stress in plants. Physiol Plant. 2021 Dec;173(4):1556-1572. doi: 10.1111/ppl.13502. Epub 2021 Jul 26. PMID: 34260753.
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How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis.

Scientific reports

Vangelisti A, Zambrano LS, Caruso G, Macheda D, Bernardi R, Usai G, Mascagni F, Giordani T, Gucci R, Cavallini A, Natali L.
PMID: 30796285
Sci Rep. 2019 Feb 22;9(1):2561. doi: 10.1038/s41598-019-39114-4.

Although Ficus carica L. (fig) is one of the most resistant fruit tree species to salinity, no comprehensive studies are currently available on its molecular responses to salinity. Here we report a transcriptome analysis of F. carica cv. Dottato...

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Vangelisti A, Zambrano LS, Caruso G, et al. How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis. Sci Rep. 2019;9(1):2561doi: 10.1038/s41598-019-39114-4.
Vangelisti, A., Zambrano, L. S., Caruso, G., Macheda, D., Bernardi, R., Usai, G., Mascagni, F., Giordani, T., Gucci, R., Cavallini, A., & Natali, L. (2019). How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis. Scientific reports, 9(1), 2561. https://doi.org/10.1038/s41598-019-39114-4
Vangelisti, Alberto, et al. "How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis." Scientific reports vol. 9,1 (2019): 2561. doi: https://doi.org/10.1038/s41598-019-39114-4
Vangelisti A, Zambrano LS, Caruso G, Macheda D, Bernardi R, Usai G, Mascagni F, Giordani T, Gucci R, Cavallini A, Natali L. How an ancient, salt-tolerant fruit crop, Ficus carica L., copes with salinity: a transcriptome analysis. Sci Rep. 2019 Feb 22;9(1):2561. doi: 10.1038/s41598-019-39114-4. PMID: 30796285; PMCID: PMC6385202.
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Identification of differentially expressed genes and pathways in isonuclear kenaf genotypes under salt stress.

Physiologia plantarum

Munsif F, Kong X, Khan A, Shah T, Arif M, Jahangir M, Akhtar K, Tang D, Zheng J, Liao X, Faisal S, Ali I, Iqbal A, Ahmad P, Zhou R.
PMID: 33135207
Physiol Plant. 2021 Dec;173(4):1295-1308. doi: 10.1111/ppl.13253. Epub 2020 Nov 18.

Salinity is a potential abiotic stress and globally threatens crop productivity. However, the molecular mechanisms underlying salt stress tolerance with respect to cytoplasmic effect, gene expression, and metabolism pathway under salt stress have not yet been reported in isonuclear...

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Munsif F, Kong X, Khan A, et al. Identification of differentially expressed genes and pathways in isonuclear kenaf genotypes under salt stress. Physiol Plant. 2020;173(4):1295-1308doi: 10.1111/ppl.13253.
Munsif, F., Kong, X., Khan, A., Shah, T., Arif, M., Jahangir, M., Akhtar, K., Tang, D., Zheng, J., Liao, X., Faisal, S., Ali, I., Iqbal, A., Ahmad, P., & Zhou, R. (2021). Identification of differentially expressed genes and pathways in isonuclear kenaf genotypes under salt stress. Physiologia plantarum, 173(4), 1295-1308. https://doi.org/10.1111/ppl.13253
Munsif, Fazal, et al. "Identification of differentially expressed genes and pathways in isonuclear kenaf genotypes under salt stress." Physiologia plantarum vol. 173,4 (2021): 1295-1308. doi: https://doi.org/10.1111/ppl.13253
Munsif F, Kong X, Khan A, Shah T, Arif M, Jahangir M, Akhtar K, Tang D, Zheng J, Liao X, Faisal S, Ali I, Iqbal A, Ahmad P, Zhou R. Identification of differentially expressed genes and pathways in isonuclear kenaf genotypes under salt stress. Physiol Plant. 2021 Dec;173(4):1295-1308. doi: 10.1111/ppl.13253. Epub 2020 Nov 18. PMID: 33135207.
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Integrated transcriptome and miRNA sequencing approaches provide insights into salt tolerance in allotriploid Populus cathayana.

Planta

Qiu T, Du K, Jing Y, Zeng Q, Liu Z, Li Y, Ren Y, Yang J, Kang X.
PMID: 34226949
Planta. 2021 Jul 05;254(2):25. doi: 10.1007/s00425-021-03600-9.

MAIN CONCLUSION: Some salt-stress responsive DEGs, mainly involved in ion transmembrane transport, hormone regulation, antioxidant system, osmotic regulation, and some miRNA jointly regulated the salt response process in allotriploid Populus cathayana. The molecular mechanism of plant polyploid stress resistance...

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Qiu T, Du K, Jing Y, et al. Integrated transcriptome and miRNA sequencing approaches provide insights into salt tolerance in allotriploid Populus cathayana. Planta. 2021;254(2):25doi: 10.1007/s00425-021-03600-9.
Qiu, T., Du, K., Jing, Y., Zeng, Q., Liu, Z., Li, Y., Ren, Y., Yang, J., & Kang, X. (2021). Integrated transcriptome and miRNA sequencing approaches provide insights into salt tolerance in allotriploid Populus cathayana. Planta, 254(2), 25. https://doi.org/10.1007/s00425-021-03600-9
Qiu, Tong, et al. "Integrated transcriptome and miRNA sequencing approaches provide insights into salt tolerance in allotriploid Populus cathayana." Planta vol. 254,2 (2021): 25. doi: https://doi.org/10.1007/s00425-021-03600-9
Qiu T, Du K, Jing Y, Zeng Q, Liu Z, Li Y, Ren Y, Yang J, Kang X. Integrated transcriptome and miRNA sequencing approaches provide insights into salt tolerance in allotriploid Populus cathayana. Planta. 2021 Jul 05;254(2):25. doi: 10.1007/s00425-021-03600-9. PMID: 34226949.
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Comparative Transcriptome Analysis Provides Insights into Response of Ulva compressa to Fluctuating Salinity Conditions.

Journal of phycology

Xing Q, Bi G, Cao M, Belcour A, Aite M, Mo Z, Mao Y.
PMID: 33715182
J Phycol. 2021 Aug;57(4):1295-1308. doi: 10.1111/jpy.13167. Epub 2021 Jun 02.

Ulva compressa, a green tide-forming species, can adapt to hypo-salinity conditions, such as estuaries and brackish lakes. To understand the underlying molecular mechanisms of hypo-salinity stress tolerance, transcriptome-wide gene expression profiles in U. compressa were created using digital gene...

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Xing Q, Bi G, Cao M, et al. Comparative Transcriptome Analysis Provides Insights into Response of Ulva compressa to Fluctuating Salinity Conditions. J Phycol. 2021;57(4):1295-1308doi: 10.1111/jpy.13167.
Xing, Q., Bi, G., Cao, M., Belcour, A., Aite, M., Mo, Z., & Mao, Y. (2021). Comparative Transcriptome Analysis Provides Insights into Response of Ulva compressa to Fluctuating Salinity Conditions. Journal of phycology, 57(4), 1295-1308. https://doi.org/10.1111/jpy.13167
Xing, Qikun, et al. "Comparative Transcriptome Analysis Provides Insights into Response of Ulva compressa to Fluctuating Salinity Conditions." Journal of phycology vol. 57,4 (2021): 1295-1308. doi: https://doi.org/10.1111/jpy.13167
Xing Q, Bi G, Cao M, Belcour A, Aite M, Mo Z, Mao Y. Comparative Transcriptome Analysis Provides Insights into Response of Ulva compressa to Fluctuating Salinity Conditions. J Phycol. 2021 Aug;57(4):1295-1308. doi: 10.1111/jpy.13167. Epub 2021 Jun 02. PMID: 33715182.
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Showing 1 to 12 of 13 entries