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Bioinformatics. 2010 Sep 01;26(17):2190-1. doi: 10.1093/bioinformatics/btq340. Epub 2010 Jul 08.

METAL: fast and efficient meta-analysis of genomewide association scans.

Bioinformatics (Oxford, England)

Cristen J Willer, Yun Li, Gonçalo R Abecasis

Affiliations

  1. Department of Biostatistics, University of Michigan, 1420 Washington Heights, Ann Arbor, Michigan 48109, USA.

PMID: 20616382 PMCID: PMC2922887 DOI: 10.1093/bioinformatics/btq340

Abstract

SUMMARY: METAL provides a computationally efficient tool for meta-analysis of genome-wide association scans, which is a commonly used approach for improving power complex traits gene mapping studies. METAL provides a rich scripting interface and implements efficient memory management to allow analyses of very large data sets and to support a variety of input file formats.

AVAILABILITY AND IMPLEMENTATION: METAL, including source code, documentation, examples, and executables, is available at http://www.sph.umich.edu/csg/abecasis/metal/.

References

  1. Genet Epidemiol. 2010 Jan;34(1):60-6 - PubMed
  2. Nat Genet. 2009 Jan;41(1):25-34 - PubMed
  3. Genet Epidemiol. 2007 Nov;31(7):776-88 - PubMed
  4. Biometrics. 1999 Dec;55(4):997-1004 - PubMed
  5. Hum Mol Genet. 2008 Oct 15;17(R2):R122-8 - PubMed
  6. Nat Genet. 2008 Feb;40(2):189-97 - PubMed
  7. Nat Genet. 2009 Jun;41(6):666-76 - PubMed
  8. Nat Genet. 2008 Feb;40(2):161-9 - PubMed
  9. Science. 2007 Jun 1;316(5829):1341-5 - PubMed
  10. Nat Genet. 2008 May;40(5):638-45 - PubMed
  11. Nat Genet. 2009 Jan;41(1):56-65 - PubMed
  12. Nat Genet. 2009 Jan;41(1):77-81 - PubMed

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